Gemin8-ps6 (gem (nuclear organelle) associated protein 8, pseudogene 6) - Rat Genome Database

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Gene: Gemin8-ps6 (gem (nuclear organelle) associated protein 8, pseudogene 6) Rattus norvegicus
Analyze
Symbol: Gemin8-ps6
Name: gem (nuclear organelle) associated protein 8, pseudogene 6
RGD ID: 1587831
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC685943; similar to family with sequence similarity 51, member A1 homolog
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8218,327,340 - 18,328,000 (+)NCBIGRCr8
mRatBN7.2216,591,951 - 16,592,611 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0214,336,120 - 14,336,780 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0214,193,611 - 14,194,271 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4214,856,980 - 14,857,640 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera212,834,576 - 12,835,236 (+)NCBICelera
Cytogenetic Map2q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Gemin8-ps6
4 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631682Bp115Blood pressure QTL 1154.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2137410502Rat
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2141244106Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)25873687102844969Rat
61368Mcs1Mammary carcinoma susceptibility QTL 14.4mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2788777223319447Rat
1600379Mcs18Mammary carcinoma susceptibility QTL 182.6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2788777242804738Rat
738012Anxrr3Anxiety related response QTL 33.8exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)2902351954023519Rat
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21159110056591100Rat
1578664Bmd9Bone mineral QTL density 95femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)21185206249003364Rat
731184Mamtr4Mammary tumor resistance QTL 40.0003mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)21649174061491740Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-54924 BioCyc
NCBI Gene 685943 ENTREZGENE
PhenoGen Gemin8-ps6 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Gemin8-ps6  gem (nuclear organelle) associated protein 8, pseudogene 6  LOC685943  similar to family with sequence similarity 51, member A1 homolog  Symbol and Name Changed 1299863 APPROVED
2008-01-09 LOC685943  similar to family with sequence similarity 51, member A1 homolog  LOC682876  similar to family with sequence similarity 51, member A1 homolog  Data merged from RGD:1593973 1643240 APPROVED
2006-11-20 LOC682876  similar to family with sequence similarity 51, member A1 homolog      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC685943  similar to family with sequence similarity 51, member A1 homolog      Symbol and Name status set to provisional 70820 PROVISIONAL