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Gene: C14h7orf57 (similar to human chromosome 7 open reading frame 57) Rattus norvegicus

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Symbol:

C14h7orf57

Name:

similar to human chromosome 7 open reading frame 57

RGD ID:

1587626

Description:

Orthologous to human C7orf57 (chromosome 7 open reading frame 57); INTERACTS WITH bisphenol A; actinomycin D (ortholog); benzo[a]pyrene (ortholog).

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

hypothetical protein LOC688553; LOC688553; MGC156806; RGD1565273; uncharacterized protein C7orf57 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	C7orf57 (chromosome 7 open reading frame 57)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Gm11992 (predicted gene 11992)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	LOC102007302 (chromosome unknown open reading frame, human C7orf57)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	C6H7orf57 (chromosome 6 C7orf57 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	C18H7orf57 (chromosome 18 C7orf57 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	CUNH7orf57 (chromosome unknown C7orf57 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	C18H7orf57 (chromosome 18 C7orf57 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	C21H7orf57 (chromosome 21 C7orf57 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	CUNH7orf57 (chromosome unknown C7orf57 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	C11H7orf57 (chromosome 11 C7orf57 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Gm11992 (predicted gene 11992)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	C7orf57 (chromosome 7 open reading frame 57)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:dkey-276j7.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	c7orf57	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	87,962,231 - 87,982,043 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	14	87,959,540 - 87,982,040 (+)	Ensembl				GRCr8
mRatBN7.2	14	83,748,478 - 83,768,293 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	83,748,478 - 83,767,435 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	14	88,138,749 - 88,157,580 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	89,378,653 - 89,397,484 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	85,845,808 - 85,864,639 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	89,253,102 - 89,272,283 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	89,253,373 - 89,273,137 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	14	89,050,478 - 89,069,659 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	14	89,587,764 - 89,606,874 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	14	82,784,769 - 82,803,577 (+)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

actinomycin D (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (ISO)

cisplatin (ISO)

copper atom (ISO)

copper(0) (ISO)

diallyl disulfide (ISO)

doxorubicin (ISO)

Nutlin-3 (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

sotorasib (ISO)

trametinib (ISO)

valproic acid (ISO)

zoledronic acid (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932

Genomics

Comparative Map Data

C14h7orf57
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	87,962,231 - 87,982,043 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	14	87,959,540 - 87,982,040 (+)	Ensembl				GRCr8
mRatBN7.2	14	83,748,478 - 83,768,293 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	83,748,478 - 83,767,435 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	14	88,138,749 - 88,157,580 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	89,378,653 - 89,397,484 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	85,845,808 - 85,864,639 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	89,253,102 - 89,272,283 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	89,253,373 - 89,273,137 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	14	89,050,478 - 89,069,659 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	14	89,587,764 - 89,606,874 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	14	82,784,769 - 82,803,577 (+)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

C7orf57
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	48,035,543 - 48,061,297 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	48,035,501 - 48,061,304 (+)	Ensembl			hg38	GRCh38
GRCh37	7	48,075,140 - 48,100,894 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	48,041,642 - 48,067,418 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	7	48,174,395 - 48,200,108 (+)	NCBI		Celera
Cytogenetic Map	7	p12.3	NCBI
HuRef	7	47,960,597 - 47,986,529 (+)	NCBI		HuRef
CHM1_1	7	48,078,810 - 48,104,594 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	48,197,785 - 48,223,552 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	48,115,064 - 48,140,794 (+)	NCBI

Gm11992
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	8,998,592 - 9,019,354 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	8,998,594 - 9,019,356 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	11	9,048,592 - 9,069,354 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	9,048,594 - 9,069,356 (+)	Ensembl			mm10	GRCm38
MGSCv37	11	8,948,595 - 8,969,357 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	11	8,948,595 - 8,969,357 (+)	NCBI		MGSCv36	mm8
Celera	11	9,485,933 - 9,506,745 (+)	NCBI		Celera
Cytogenetic Map	11	A1	NCBI
cM Map	11	5.79	NCBI

LOC102007302
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955456	5,400,302 - 5,414,448 (-)	Ensembl
ChiLan1.0	NW_004955456	5,399,326 - 5,414,002 (-)	NCBI	ChiLan1.0	ChiLan1.0

C6H7orf57
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	52,911,536 - 52,942,617 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	101,236,269 - 101,266,510 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	48,677,343 - 48,702,592 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	48,786,936 - 48,810,784 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	48,791,961 - 48,810,744 (+)	Ensembl			panPan2	panpan1.1

C18H7orf57
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	82,168 - 95,529 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	81,796 - 94,950 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	49,029 - 62,402 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	114,852 - 128,098 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	114,870 - 128,075 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	89,682 - 103,046 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	92,633 - 105,948 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	227,665 - 240,998 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

CUNH7orf57
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	103,247,974 - 103,268,863 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936478	22,460,492 - 22,473,310 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936478	22,460,480 - 22,480,080 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

C18H7orf57
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	48,451,103 - 48,473,226 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	18	48,451,099 - 48,473,246 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

C21H7orf57
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	10,735,574 - 10,762,513 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666062	11,469,525 - 11,496,228 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

CUNH7orf57
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	5,536,589 - 5,555,067 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624740	5,538,102 - 5,555,257 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

C11H7orf57
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	11	78,110,882 - 78,123,747 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in C14h7orf57
107 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	27
Count of miRNA genes:	26
Interacting mature miRNAs:	27
Transcripts:	ENSRNOT00000035922
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631213	Bw60	Body weight QTL60	4.51		retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	14	84164970	100078267	Rat
1582236	Gluco22	Glucose level QTL 22	3.3	0.0164	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	77640071	96755654	Rat
9590294	Uminl4	Urine mineral level QTL 4	5.66	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	14	59848686	104848686	Rat
2300197	Scl59	Serum cholesterol level QTL 59			blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	14	77914838	104348525	Rat
631523	Pia13	Pristane induced arthritis QTL 13	3.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	14	33424686	102238540	Rat
1582259	Gluco23	Glucose level QTL 23	3.1	0.0008	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	14	74255551	109089856	Rat
1582197	Gluco27	Glucose level QTL 27	3.4	0.0006	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	14	77640071	96755654	Rat
634328	Hc5	Hypercalciuria QTL 5	2.3		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	14	62398852	107398852	Rat
1582250	Gluco26	Glucose level QTL 26	3.3	0.0009	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	77640071	100078267	Rat
2317879	Alcrsp27	Alcohol response QTL 27	3.3	0.63	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	14	60854936	105854936	Rat
1641900	Alcrsp11	Alcohol response QTL 11			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	14	74255551	109089856	Rat
4889951	Bss92	Bone structure and strength QTL 92	3.9		tibia area (VT:1000281)	tibia-fibula cortical bone total cross-sectional area (CMO:0001721)	14	86271332	100078267	Rat
631839	Niddm37	Non-insulin dependent diabetes mellitus QTL 37	3.37		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	11334716	100078267	Rat
1582255	Gluco29	Glucose level QTL 29	3.1	0.0025	blood glucose amount (VT:0000188)	absolute change in blood glucose level area under curve (CMO:0002034)	14	77640071	96755654	Rat
9589034	Epfw11	Epididymal fat weight QTL 11	6	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	14	59848686	104848686	Rat
1582209	Gluco20	Glucose level QTL 20	3.8	0.0005	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	77640071	96755654	Rat
1300136	Rf22	Renal function QTL 22	3.9		renal blood flow trait (VT:2000006)	absolute change in renal vascular resistance (CMO:0001900)	14	42616258	99224555	Rat
1549834	Scl45	Serum cholesterol level QTL 45	5.8		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	14	65920283	99224555	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	8	64	140	81	82	51	92	51	6	339	184	11	113	81	90	31	7	7

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001135915	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039092456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063273632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC127536	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000035922 ⟹ ENSRNOP00000031005

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	87,962,156 - 87,977,425 (+)	Ensembl
mRatBN7.2 Ensembl	14	83,748,478 - 83,763,675 (+)	Ensembl
Rnor_6.0 Ensembl	14	89,253,373 - 89,273,137 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113242 ⟹ ENSRNOP00000082043

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	87,962,172 - 87,982,040 (+)	Ensembl
mRatBN7.2 Ensembl	14	83,748,478 - 83,767,435 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000139926 ⟹ ENSRNOP00000101424

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	87,959,540 - 87,982,040 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000160075 ⟹ ENSRNOP00000101237

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	87,962,156 - 87,981,536 (+)	Ensembl

RefSeq Acc Id:

NM_001135915 ⟹ NP_001129387

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	87,962,231 - 87,981,187 (+)	NCBI
mRatBN7.2	14	83,748,478 - 83,767,437 (+)	NCBI
Rnor_6.0	14	89,253,102 - 89,272,283 (+)	NCBI
Rnor_5.0	14	89,050,478 - 89,069,659 (+)	NCBI
RGSC_v3.4	14	89,587,764 - 89,606,874 (+)	RGD
Celera	14	82,784,769 - 82,803,577 (+)	RGD

Sequence:

show sequence

GTAAATCCCAGATCTGGAGAACCGGGAGCTCACAGTGACCTCAGTGCCTGCCAGACCCTGCGGC
CCGTGATGACTTATAGTACACTTAATATAGTCCTGCTGTCTACGCTGCGTGCACGTGCCCTTGC
TGTTTACCCCGCTTAACGTGCCGGGTGCTGTCTACCTGCTTGCCAGATCCCCTGTGGTATACTC
ACTGAATGCGCTCTGGCTGTATATTCTGGCGCATGTGCTCCTCCTGGGTGTTCAGCGTGGACAC
CGTGCTGCCGTGTGAGCGCAGTGGCCGTGCCAGCTCCTGGGCGTAAGGCGTCTGCAGGTGTGTC
AGCTGGAGGCGGGTGGAACCACGAGCGCGCTGACTTTGCCCCTGCAGCCTCTGCTCCCATCGGG
CCAGTCGGTCGGCGGCTCCCAGAGAACCAGGGCTTAGCAGCACCTTTCTCTTCCGGACGCGGAC
TTGCTCACCGCACCAGACCATGAGGAACACCAGCAAGGAGGTGCAGAGCACCTCTTATCGCTAC
GCTCCCTGCGATTGGTATTACCACCTACCCGTGAAGCGTTCCGAGAAGCCTGTGGGTGCCCCAC
CAGCATCCCAGATCCCAGGGCTCAGCGACTTGAGAGACTCCCCAAGTGTGAATTTGCCTCGTGC
TCGGAGATACTGGATAAAAGAAACGGACTCGGAGTATGTGAAACTGGCCAAGCAAGGTGGCAGA
CCTGATTTGTTGAAGCACTTTGCCCCTGGAACCAGACAAGGCTCCCCAGTCGCCTACTCCCTGC
CAGACTGGTATATTCACCACAGTAAGCCTCCAACGTCTCTCCAGCGAGAAGTCCCTGCGGTCTC
CATTCCAGAATACATGGTGTATGAAGAGTTCAACCCCGACCAGGCCAATGGCAGCTATGAGTCC
AGACAAGGCCCCTTTGACTTTGACAGGAAAACAATTTGGCAAAGAGAGGCTGAGGAGCTTGAAA
ATGTGAAGAGAAAGGTGAAACTGCCAGCTATCAATTCCAAGAACTCAAGCAAAGCGGGGACCCC
GGTCAACAACAAAGACTCCGATAAGAGCAGGCTGTCGTTGCCTCCTATGCCGGGTCCAAAAACT
GGTTCACCCACAAACTTTTCCAAACTTATCAGCAATGGCTACAAGGACGAGTGGTTACAGCAGC
AGAAGGCTGATTCTGACAGGAGGACTCCAAAGACATCCGAGGCATCCGTGTCCACCCAGTCCAC
AGAGGACTCTAAAAGTAAAAGTAGCCAAGATACAGAGACGCCTCAAAATTCAGAGACCCCTGAA
GGCTCTGAGAAAACTCCAGATGCAGAAGCTCCCCCATCAGAAGCAACGCCAGAGGAGCTCAAAT
AACCCTGGATGTGCTATCCAGACAACCCTTTTAGTTACTATCTATAGCGTGACAACAGGCAGCT
ATGTTTACAGGCTCCCGTTCTATTTTATTAACATAGAATCTTACGGAAAAAAAAAAAAAAAAAA
AAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039092456 ⟹ XP_038948384

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	87,962,620 - 87,982,043 (+)	NCBI
mRatBN7.2	14	83,748,864 - 83,768,293 (+)	NCBI

RefSeq Acc Id:

XM_063273632 ⟹ XP_063129702

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	87,965,466 - 87,982,043 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001129387	(Get FASTA)	NCBI Sequence Viewer
	XP_038948384	(Get FASTA)	NCBI Sequence Viewer
	XP_063129702	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	A0JPQ1	(Get FASTA)	NCBI Sequence Viewer
	AAI27537	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000082043
	ENSRNOP00000082043.1
	ENSRNOP00000101237

RefSeq Acc Id:

NP_001129387 ⟸ NM_001135915

- UniProtKB:

A0JPQ1 (UniProtKB/Swiss-Prot), A0A8L2QG77 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MRNTSKEVQSTSYRYAPCDWYYHLPVKRSEKPVGAPPASQIPGLSDLRDSPSVNLPRARRYWIK
ETDSEYVKLAKQGGRPDLLKHFAPGTRQGSPVAYSLPDWYIHHSKPPTSLQREVPAVSIPEYMV
YEEFNPDQANGSYESRQGPFDFDRKTIWQREAEELENVKRKVKLPAINSKNSSKAGTPVNNKDS
DKSRLSLPPMPGPKTGSPTNFSKLISNGYKDEWLQQQKADSDRRTPKTSEASVSTQSTEDSKSK
SSQDTETPQNSETPEGSEKTPDAEAPPSEATPEELK

hide sequence

Ensembl Acc Id:

ENSRNOP00000031005 ⟸ ENSRNOT00000035922

RefSeq Acc Id:	XP_038948384 ⟸ XM_039092456
- Peptide Label:	isoform X1

Ensembl Acc Id:

ENSRNOP00000082043 ⟸ ENSRNOT00000113242

RefSeq Acc Id:	XP_063129702 ⟸ XM_063273632
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSRNOP00000101424 ⟸ ENSRNOT00000139926

Ensembl Acc Id:

ENSRNOP00000101237 ⟸ ENSRNOT00000160075

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0JPQ1-F1-model_v2	AlphaFold	A0JPQ1	1-292	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699489

Promoter ID:

EPDNEW_R10012

Type:

initiation region

Name:

LOC688553_1

Description:

hypothetical protein LOC688553

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	14	89,253,455 - 89,253,515	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1587626	AgrOrtholog
BioCyc Gene	G2FUF-15022	BioCyc
Ensembl Genes	ENSRNOG00000037632	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000113242	ENTREZGENE
	ENSRNOT00000113242.1	UniProtKB/Swiss-Prot
	ENSRNOT00000160075	ENTREZGENE
IMAGE_CLONE	IMAGE:7134154	IMAGE-MGC_LOAD
InterPro	DUF5524	UniProtKB/Swiss-Prot
KEGG Report	rno:688553	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:156806	IMAGE-MGC_LOAD
NCBI Gene	688553	ENTREZGENE
PANTHER	CHROMOSOME 7 OPEN READING FRAME 57	UniProtKB/Swiss-Prot
	PTHR31097	UniProtKB/Swiss-Prot
Pfam	DUF5524	UniProtKB/Swiss-Prot
PhenoGen	C14h7orf57	PhenoGen
RatGTEx	ENSRNOG00000037632	RatGTEx
UniProt	A0A8L2QG77	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0L021_RAT	UniProtKB/TrEMBL
	A0ABK0LIT2_RAT	UniProtKB/TrEMBL
	A0JPQ1	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-09-19	C14h7orf57	similar to human chromosome 7 open reading frame 57	LOC688553	hypothetical protein LOC688553	Symbol and Name Changed	1299863	APPROVED
2006-11-19	LOC688553	hypothetical protein LOC688553			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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