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Gene: Zfp185 (zinc finger protein 185) Rattus norvegicus

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Symbol:

Zfp185

Name:

zinc finger protein 185

RGD ID:

1586351

Description:

Predicted to enable metal ion binding activity. Orthologous to human ZNF185 (zinc finger protein 185 with LIM domain); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; methoxychlor.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC689949; similar to zinc finger protein 185

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	155,874,138 - 155,919,921 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	155,874,127 - 155,917,077 (+)	Ensembl				GRCr8
mRatBN7.2	X	150,831,869 - 150,877,652 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	150,831,862 - 150,874,810 (+)	Ensembl				mRatBN7.2
Rnor_6.0	X	152,989,099 - 153,034,289 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	152,999,016 - 153,031,444 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	148,718,734 - 148,763,867 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	158,990,740 - 159,024,426 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	131,796,229 - 131,841,934 (+)	NCBI		Celera
Cytogenetic Map	X	q37	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

2,6-dimethoxyphenol (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

afimoxifene (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

alpha-pinene (ISO)

Aroclor 1254 (ISO)

arsenite(3-) (ISO)

belinostat (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chrysene (ISO)

ciglitazone (ISO)

cisplatin (ISO)

cobalt dichloride (ISO)

coumarin (ISO)

CU-O LINKAGE (ISO)

decabromodiphenyl ether (ISO)

enzyme inhibitor (ISO)

ethanol (ISO)

FR900359 (ISO)

furfural (ISO)

inulin (ISO)

isobutanol (ISO)

lead diacetate (ISO)

lipopolysaccharide (ISO)

methoxychlor (EXP)

mono(2-ethylhexyl) phthalate (ISO)

Monobutylphthalate (ISO)

ozone (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

sodium arsenite (ISO)

sodium chloride (ISO)

sodium dodecyl sulfate (ISO)

succimer (ISO)

sunitinib (ISO)

testosterone (EXP)

thiram (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

actin cytoskeleton (ISO)

cytosol (ISO)

focal adhesion (ISO)

plasma membrane (ISO)

Molecular Function

metal ion binding (IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:33450132

Genomics

Comparative Map Data

Zfp185
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	155,874,138 - 155,919,921 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	155,874,127 - 155,917,077 (+)	Ensembl				GRCr8
mRatBN7.2	X	150,831,869 - 150,877,652 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	150,831,862 - 150,874,810 (+)	Ensembl				mRatBN7.2
Rnor_6.0	X	152,989,099 - 153,034,289 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	152,999,016 - 153,031,444 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	148,718,734 - 148,763,867 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	158,990,740 - 159,024,426 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	131,796,229 - 131,841,934 (+)	NCBI		Celera
Cytogenetic Map	X	q37	NCBI

ZNF185
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	152,898,067 - 152,973,481 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	152,896,695 - 152,973,511 (+)	Ensembl			hg38	GRCh38
GRCh37	X	152,066,611 - 152,142,025 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	151,833,653 - 151,892,678 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	X	151,757,232 - 151,812,583	NCBI
Celera	X	152,417,145 - 152,476,190 (+)	NCBI		Celera
Cytogenetic Map	X	q28	NCBI
HuRef	X	140,883,699 - 140,942,530 (+)	NCBI		HuRef
CHM1_1	X	151,957,910 - 152,016,969 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	151,164,487 - 151,239,920 (+)	NCBI		T2T-CHM13v2.0

Zfp185
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	72,030,860 - 72,075,149 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	72,030,945 - 72,075,149 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	X	72,987,252 - 73,031,543 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	72,987,339 - 73,031,543 (+)	Ensembl			mm10	GRCm38
MGSCv37	X	70,232,678 - 70,276,882 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	X	69,250,502 - 69,284,232 (+)	NCBI		MGSCv36	mm8
Celera	X	63,910,727 - 63,955,718 (+)	NCBI		Celera
Cytogenetic Map	X	A7.3	NCBI
cM Map	X	37.29	NCBI

Znf185
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955498	8,185,994 - 8,253,209 (+)	Ensembl
ChiLan1.0	NW_004955498	8,185,997 - 8,248,910 (+)	NCBI	ChiLan1.0	ChiLan1.0

ZNF185
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	152,962,326 - 153,037,654 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	152,965,929 - 153,041,257 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	142,472,497 - 142,547,835 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	152,391,505 - 152,467,150 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	152,391,505 - 152,464,221 (+)	Ensembl			panPan2	panpan1.1

ZNF185
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	120,770,099 - 120,846,855 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	120,782,011 - 120,843,322 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	106,150,793 - 106,215,089 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	123,006,936 - 123,071,169 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	123,006,426 - 123,067,652 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	119,723,086 - 119,787,382 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	122,213,729 - 122,277,932 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	122,088,803 - 122,153,011 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Znf185
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	118,006,648 - 118,104,290 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936714	152,319 - 218,921 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936714	167,552 - 218,785 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZNF185
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	123,944,210 - 123,987,962 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	X	123,942,981 - 123,988,102 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	141,414,957 - 141,458,745 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZNF185
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	127,418,209 - 127,493,217 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666065	65,244,826 - 65,316,227 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Znf185
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624883	4,084,196 - 4,140,508 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624883	4,084,018 - 4,140,308 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Znf185
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	X	129,365,241 - 129,406,713 (-)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	74
Count of miRNA genes:	35
Interacting mature miRNAs:	36
Transcripts:	ENSRNOT00000023109, ENSRNOT00000072259
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
738025	Stresp3	Stress response QTL 3	4.61	0.0066	stress-related behavior trait (VT:0010451)	defensive burying - approach	X	105359969	157758123	Rat
10059603	Bw174	Body weight QTL 174	3.4	0.025	body mass (VT:0001259)	body weight (CMO:0000012)	X	118973754	157758123	Rat

Markers in Region

D10Chm13

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	150,854,528 - 150,854,728 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	153,011,166 - 153,011,365	NCBI	Rnor6.0
Rnor_5.0	1	148,740,744 - 148,740,943	UniSTS	Rnor5.0
RGSC_v3.4	X	159,003,495 - 159,003,694	UniSTS	RGSC3.4
Celera	1	131,818,812 - 131,819,011	UniSTS
Cytogenetic Map	X	q37	UniSTS

U46687

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	150,875,530 - 150,875,623 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	153,032,168 - 153,032,260	NCBI	Rnor6.0
Rnor_5.0	1	148,761,746 - 148,761,838	UniSTS	Rnor5.0
RGSC_v3.4	X	159,025,147 - 159,025,239	UniSTS	RGSC3.4
Celera	1	131,839,813 - 131,839,905	UniSTS
Cytogenetic Map	X	q37	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	66	141	88	87	56	59	56	6	318	158	11	119	80	92	31	9	9

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001433021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602423	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039100265	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000088234 ⟹ ENSRNOP00000069186

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	155,874,127 - 155,917,077 (+)	Ensembl
mRatBN7.2 Ensembl	X	150,831,862 - 150,874,810 (+)	Ensembl
Rnor_6.0 Ensembl	X	152,999,016 - 153,031,444 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096881 ⟹ ENSRNOP00000087665

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	155,874,127 - 155,917,077 (+)	Ensembl
mRatBN7.2 Ensembl	X	150,831,862 - 150,874,810 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000151616 ⟹ ENSRNOP00000106478

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	155,874,127 - 155,917,077 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000161009 ⟹ ENSRNOP00000110152

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	155,887,768 - 155,917,077 (+)	Ensembl

RefSeq Acc Id:

XM_006229520 ⟹ XP_006229582

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	155,874,139 - 155,919,921 (+)	NCBI
mRatBN7.2	X	150,831,870 - 150,877,652 (+)	NCBI
Rnor_6.0	X	152,989,100 - 153,034,289 (+)	NCBI
Rnor_5.0	1	148,718,734 - 148,763,867 (+)	NCBI

Sequence:

show sequence

CCGGAGAAAACCTGTTTGTTCTCGGGCGGGCGGAGCCCATTCCGTGCCTCCTCGCGTCCCCGCG
CGCTTCCCGCTGCGCCCCGCTCCAGGCGCCCGCTGACGCGGCCCCGCTGGGTCCAGCGCTGCCC
ACCCGAGGGAGCCCGCGCGCCACGACCGCACCTCTCTCTGCCCCTCACACAAGCCGGCACCTGT
ACCAGGAGCCCACTGAATCCACTAATTGCAGAACTGAAAGATAAACATCATGAGTATTTCTTCA
TTAGGAGATATTGGAAAAGGGAGGCCTTTACCATCAGGAGAAGAGGAGCGCAATAATATCCTAA
AACAGATGAAAGTACGAACTACACTGAAGGGTGACCAGAGCTGGATCACCAAGCATGACAACTC
TGAGGACCATACCAAAGAGCCATTGTCAAGTCAAAACCGAGCTACATCCTTCTCATCTGTGAGA
GACGAATCAAATGTCAGGTCTCCAAACACAAGAGCTCCAGCTGGTTATATCATCCGGGGAGTGT
TCACCCGAACAATAGATAGTTCTTCTCACTCCCAGCATCACCCTTCTAAGACCAATGGCGCTGC
AAGAAGTGCTTCTGGGCAGCTGGGAACAGCTAATTCTGGTCGTCCTCTTCAGTCGCCTGGCTAT
AAGATGACTACAGAAGATTATAAGAAGCTAGCCCCGTACAACATCAGGTGCAGCTCCGTATCAG
GGACTGAGGAAGAGGAGGTGCCATTCACCCCAGATGAGCAGAAACGGAGGTCCCAAGCTGCAAT
TGGTGTTCTCAGGAAGACAGCACCACGGGAGCACTCTTACGTCCTTTCAGCAGCTAAGAAGACC
ACTAGCAGTCCTACCCAGGAACTACAGTCGCCATTTATTGCAAAAAGGGTTGATGTGGTAGATG
AGGACGTGCTTCCTGAAAAGAGACAAGAACCACCTGCTCTGACAAGACATACTCCTGGCTTAAG
TGTGGATGGAAGAAGGACCCAAATATCTCAGGAGATTCTAATTGAGTGCATGCCAAATATGCCT
AGCCCTTCTGGAAACCAGGAACCCAGCTTGACAACTGAGAAGATTGTCCATCTGCAGATCTCAA
CCCCCAGAGCAGGACTCCACCTGGTGGCCCCAGACCTGGAAGCCCTGAGCCCCTCAGGTGATTA
TAAGACAAATATGGACCCCAAGACCATCGAGGCCTGGCAAGAGATGCCTGATGATATGAAAGGT
GACCAAGGAGACCTACTAACAACCACTGAATATGCTGCAGATCCCAGCACCCCCCATCTGCAGA
GCAACCCCAGTGCACTCAATCAGCTCGTCAAACATGATGCTTGTGCCAGCAGCACTCCAGATGC
TTGTGAGAAGAAAAATACAGCCCCCAAGAACATCCACGCCTTACAGGAGATACATGGTGACTCA
AATGTGGCTTCTCAACAACTTGCAGATCTCAGCATTCCAAAGCCACAGAGTAGCCCCAGCAAAC
CCCAGCAGCAAATCAAAGTAGAGGATTATACCAACAATCAGAAAAGCCCTTCAAGCAGCATTGC
CACTGTTACTGTCTCCAACACCTCCGAACAATCTCAATTGACTGTTGCTGGTGCCTCAAGTGAG
GTGGACTCCAGCTCAACTATCAAAGGGATTCTTTTCGTGAAGGAATACATGAATGCTAGTGAAG
TGTCTTCTGGGAAGCCAGTGTTTTCACACTGTGACAGTACCAGCTGCATTGAAGACTCATTGGA
TCTGGCAAAGAAAGCCCCCCGTGATGGCACTCCACCTTCTGACAGACCAACTGAAGGGGTCTGT
ACTTACTGTAGCCGTGAGATCCAAGACTGTCCGAAGATTACCCTTGAACATCTTGGCATCTGCT
GCCATGAGTATTGTTTTAAGTGTGAGATTTGCAATAAACCAATGGGAGATCTCCTAGATCAGAT
CTTTATTCACCGTGACACCATCCACTGTGGGAAATGCTATGAGAAGCTCTTCTAGGCTGAACAG
AAGCTGATGATCCCCAGCTGTCTTTGGCTGTCCAGTTGACCCAAATTGTTGGCTCCTCCTCCCT
TATATCCTCCATGGTTCCACTGTACTTCTGCCCACCTTGTACTGAAGTAGCATACATTCAAGAT
TGTATAACAATGATGTTATAATTACTTTTGTGTAGCCTTTTATACCTTAGGAATATCTCAGTTC
AGGCTTGAAATCCTTGCTTCCAATATAAATGAATCCACTTTGACTTCCCTAAGATATGTTGGCT
TTGTAATGAGTGCAGATGGCCCAGTATGTTAGACATGGGTACAAGTCTAGGTATCAGCTTATGC
AGACTTTCTGAAACTTCTGATGGGCCAAGCCAAAGAAACTGTTGACGATCCCTGGTAGGGAAAT
TACAGGCATTGAATGCTAAGGGTTGGCAATAGGCTAATGTTTAGCTTGTCTATTCATTCTGTGT
GAGTGTGTGGATGTGTGTATTTTTAAATTTCTCACAATTTTTGAAATAGTTAATTGTCTTTGAT
TGAATTGTGTAGCAGATTTAAATTACCTCCTCCCATTCTCCTTTGAGTTTTTCCAGTCAGTTAT
GTCAGCACATGTTGGAAAGTTTACCCAGCTTTAAATTTGATAAGATACACTATTAGAAGGCTTC
TAACCAAAGGGATATCCTTGTCCGTTTGAATTTTCATAGTTGGTTAAAATCTTTAGCTTCAGTA
TTTCTGGACTTTTATTCTCTGAGCTGCTTTTAAGGTGTATAGATCTTAAAAGGGTAAAGAAGAA
AACAGATAAGGTTTCTTGAGACTTCGCCACACACCCGGCATTACCACAAAGCACTGGCTTGGAT
CTAATTAATAATCTCTAAGATATTCTCATCTTCAGTTTAGAAATGAAGAAAGTAATGCTCAGAG
AAGTGTGAAAACTCCTGTAGAACCACTGTTGTCTCTCTCTTTCTCCCTTTCTCCTCCCCCAACC
CCCCAGAGCCCATACTTTCTCCAGAAGCGATAACCACAATGGCACTGACTATGTGTCAGGCTGT
TTGAAGGGCCCCTGTTCCTAATGTGAAATATTTCCCTGAAGTGTAGTGTTAGAAATGGTTTTGA
AAAGTGTGAAATTCACCCCATCTCTGGGCTTCTTGGGTCCCTCCTCGAAACACTACGGTAATTT
AACTGCTCCCTTTCCCTCTCCTACAAACAGAGGTGTTCACATGGGAACAAATTTGGCTTATGCA
ACTTCTCAAAGAAAAGCTTGCTATCCAGTGAGATGTGCAGTAGGCTCTCTGCCCTGATCACATT
GCCTTTTGTGACCTGTTTTCTAGTCCTGAATCTGTCTCAAACTAACATCAACTTCTAGGTCCCC
AGGTACTCAAACACTGCCAGCTGATGTCTGACCCAGCAGACGCAGGTTCATCCCTGAGTTTACT
AATACACTGCTCGGATTCAACTTCACTCTGCTGCCTTTGGGCTCGGCCTTAAATTGGAAGCTCC
TTGAAAGGAAAAATAGCCCTCAAGACTTGGGGATGCAAAATGAAGGCCTCTTTGTTGGATTTAC
TTATAACTCTTCTCTTTCTCCAGAATTTGAACCCTAGACACATTTGAGTGTGGACTTGTTCTTC
CTATCATGTAATCAGAGAAGAACATTCTATTTATTTGACTATCTGTTACATGTACTCTGAAGAG
GAGAAGGAGTACATTGTTCCACACCCAGATACTAATTATGAACTAGTCTTCTCAAGTTCAGCTC
TAGGATGGGACTTAGCAGATGATGGGCATTACCATATGTGTGCCAAATGAATTAATAAGAGAAC
ACTAAGTTACTCCCTTAGTTACCTGGGCATGTCAGTACAGGCCTCAGGGATGGAAGAAGAGGCT
CTGTATCTGATGAATTCCCCACCTTAAAGGTGTACTCTGCCATTTAAAGAGTTTTAGAAATATG
GAATATACTCAGACAGCTTGTAAGGTTAGTACTGATTTGAATCCAAAACAGCCCTTTTGTGTCT
TAGACACAAAATTCTGCAGCTAACAGACGGATGGTTTTGCATTAATTTACTTCTTTTTAATTGC
TTAGTGTTTTAATTATACTTGTTTAATCCACATTAATGTACACAAATGACAATAAATGTTAAGA
TATTA

hide sequence

RefSeq Acc Id:

XM_006229522 ⟹ XP_006229584

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	155,874,139 - 155,919,921 (+)	NCBI
mRatBN7.2	X	150,831,869 - 150,877,652 (+)	NCBI
Rnor_6.0	X	152,989,099 - 153,034,289 (+)	NCBI
Rnor_5.0	1	148,718,734 - 148,763,867 (+)	NCBI

Sequence:

show sequence

GCCGGAGAAAACCTGTTTGTTCTCGGGCGGGCGGAGCCCATTCCGTGCCTCCTCGCGTCCCCGC
GCGCTTCCCGCTGCGCCCCGCTCCAGGCGCCCGCTGACGCGGCCCCGCTGGGTCCAGCGCTGCC
CACCCGAGGGAGCCCGCGCGCCACGACCGCACCTCTCTCTGCCCCTCACACAAGCCGGCACCTG
TACCAGGAGCCCACTGAATCCACTAATTGCAGAACTGAAAGATAAACATCATGAGTATTTCTTC
ATTAGGAGATATTGGAAAAGGGAGGCCTTTACCATCAGGAGAAGAGGAGCGCAATAATATCCTA
AAACAGATGAAAGTACGAACTACACTGAAGGGTGACCAGAGCTGGATCACCAAGCATGACAACT
CTGAGGACCATACCAAAGAGCCATTGTCAAGTCAAAACCGAGCTACATCCTTCTCATCTGTGAG
AGACGAATCAAATGTCAGGTCTCCAAACACAAGAGCTCCAGCTGGTTATATCATCCGGGGAGTG
TTCACCCGAACAATAGATAGTTCTTCTCACTCCCAGCATCACCCTTCTAAGACCAATGGCGCTG
CAAGAAGTGCTTCTGGGCAGCTGGGAACAGCTAATTCTGGTCGTCCTCTTCAGTCGCCTGGCTA
TAAGATGACTACAGAAGATTATAAGAAGCTAGCCCCGTACAACATCAGGTGCAGCTCCGTATCA
GGGACTGAGGAAGAGGAGGTGCCATTCACCCCAGATGAGCAGAAACGGAGGTCCCAAGCTGCAA
TTGGTGTTCTCAGGAAGACAGCACCACGGGAGCACTCTTACGTCCTTTCAGCAGCTAAGAAGAC
CACTAGTCCTACCCAGGAACTACAGTCGCCATTTATTGCAAAAAGGGTTGATGTGGTAGATGAG
GACGTGCTTCCTGAAAAGAGACAAGAACCACCTGCTCTGACAAGACATACTCCTGGCTTAAGTG
TGGATGGAAGAAGGACCCAAATATCTCAGGAGATTCTAATTGAGTGCATGCCAAATATGCCTAG
CCCTTCTGGAAACCAGGAACCCAGCTTGACAACTGAGAAGATTGTCCATCTGCAGATCTCAACC
CCCAGAGCAGGACTCCACCTGGTGGCCCCAGACCTGGAAGCCCTGAGCCCCTCAGGTGATTATA
AGACAAATATGGACCCCAAGACCATCGAGGCCTGGCAAGAGATGCCTGATGATATGAAAGGTGA
CCAAGGAGACCTACTAACAACCACTGAATATGCTGCAGATCCCAGCACCCCCCATCTGCAGAGC
AACCCCAGTGCACTCAATCAGCTCGTCAAACATGATGCTTGTGCCAGCAGCACTCCAGATGCTT
GTGAGAAGAAAAATACAGCCCCCAAGAACATCCACGCCTTACAGGAGATACATGGTGACTCAAA
TGTGGCTTCTCAACAACTTGCAGATCTCAGCATTCCAAAGCCACAGAGTAGCCCCAGCAAACCC
CAGCAGCAAATCAAAGTAGAGGATTATACCAACAATCAGAAAAGCCCTTCAAGCAGCATTGCCA
CTGTTACTGTCTCCAACACCTCCGAACAATCTCAATTGACTGTTGCTGGTGCCTCAAGTGAGGT
GGACTCCAGCTCAACTATCAAAGGGATTCTTTTCGTGAAGGAATACATGAATGCTAGTGAAGTG
TCTTCTGGGAAGCCAGTGTTTTCACACTGTGACAGTACCAGCTGCATTGAAGACTCATTGGATC
TGGCAAAGAAAGCCCCCCGTGATGGCACTCCACCTTCTGACAGACCAACTGAAGGGGTCTGTAC
TTACTGTAGCCGTGAGATCCAAGACTGTCCGAAGATTACCCTTGAACATCTTGGCATCTGCTGC
CATGAGTATTGTTTTAAGTGTGAGATTTGCAATAAACCAATGGGAGATCTCCTAGATCAGATCT
TTATTCACCGTGACACCATCCACTGTGGGAAATGCTATGAGAAGCTCTTCTAGGCTGAACAGAA
GCTGATGATCCCCAGCTGTCTTTGGCTGTCCAGTTGACCCAAATTGTTGGCTCCTCCTCCCTTA
TATCCTCCATGGTTCCACTGTACTTCTGCCCACCTTGTACTGAAGTAGCATACATTCAAGATTG
TATAACAATGATGTTATAATTACTTTTGTGTAGCCTTTTATACCTTAGGAATATCTCAGTTCAG
GCTTGAAATCCTTGCTTCCAATATAAATGAATCCACTTTGACTTCCCTAAGATATGTTGGCTTT
GTAATGAGTGCAGATGGCCCAGTATGTTAGACATGGGTACAAGTCTAGGTATCAGCTTATGCAG
ACTTTCTGAAACTTCTGATGGGCCAAGCCAAAGAAACTGTTGACGATCCCTGGTAGGGAAATTA
CAGGCATTGAATGCTAAGGGTTGGCAATAGGCTAATGTTTAGCTTGTCTATTCATTCTGTGTGA
GTGTGTGGATGTGTGTATTTTTAAATTTCTCACAATTTTTGAAATAGTTAATTGTCTTTGATTG
AATTGTGTAGCAGATTTAAATTACCTCCTCCCATTCTCCTTTGAGTTTTTCCAGTCAGTTATGT
CAGCACATGTTGGAAAGTTTACCCAGCTTTAAATTTGATAAGATACACTATTAGAAGGCTTCTA
ACCAAAGGGATATCCTTGTCCGTTTGAATTTTCATAGTTGGTTAAAATCTTTAGCTTCAGTATT
TCTGGACTTTTATTCTCTGAGCTGCTTTTAAGGTGTATAGATCTTAAAAGGGTAAAGAAGAAAA
CAGATAAGGTTTCTTGAGACTTCGCCACACACCCGGCATTACCACAAAGCACTGGCTTGGATCT
AATTAATAATCTCTAAGATATTCTCATCTTCAGTTTAGAAATGAAGAAAGTAATGCTCAGAGAA
GTGTGAAAACTCCTGTAGAACCACTGTTGTCTCTCTCTTTCTCCCTTTCTCCTCCCCCAACCCC
CCAGAGCCCATACTTTCTCCAGAAGCGATAACCACAATGGCACTGACTATGTGTCAGGCTGTTT
GAAGGGCCCCTGTTCCTAATGTGAAATATTTCCCTGAAGTGTAGTGTTAGAAATGGTTTTGAAA
AGTGTGAAATTCACCCCATCTCTGGGCTTCTTGGGTCCCTCCTCGAAACACTACGGTAATTTAA
CTGCTCCCTTTCCCTCTCCTACAAACAGAGGTGTTCACATGGGAACAAATTTGGCTTATGCAAC
TTCTCAAAGAAAAGCTTGCTATCCAGTGAGATGTGCAGTAGGCTCTCTGCCCTGATCACATTGC
CTTTTGTGACCTGTTTTCTAGTCCTGAATCTGTCTCAAACTAACATCAACTTCTAGGTCCCCAG
GTACTCAAACACTGCCAGCTGATGTCTGACCCAGCAGACGCAGGTTCATCCCTGAGTTTACTAA
TACACTGCTCGGATTCAACTTCACTCTGCTGCCTTTGGGCTCGGCCTTAAATTGGAAGCTCCTT
GAAAGGAAAAATAGCCCTCAAGACTTGGGGATGCAAAATGAAGGCCTCTTTGTTGGATTTACTT
ATAACTCTTCTCTTTCTCCAGAATTTGAACCCTAGACACATTTGAGTGTGGACTTGTTCTTCCT
ATCATGTAATCAGAGAAGAACATTCTATTTATTTGACTATCTGTTACATGTACTCTGAAGAGGA
GAAGGAGTACATTGTTCCACACCCAGATACTAATTATGAACTAGTCTTCTCAAGTTCAGCTCTA
GGATGGGACTTAGCAGATGATGGGCATTACCATATGTGTGCCAAATGAATTAATAAGAGAACAC
TAAGTTACTCCCTTAGTTACCTGGGCATGTCAGTACAGGCCTCAGGGATGGAAGAAGAGGCTCT
GTATCTGATGAATTCCCCACCTTAAAGGTGTACTCTGCCATTTAAAGAGTTTTAGAAATATGGA
ATATACTCAGACAGCTTGTAAGGTTAGTACTGATTTGAATCCAAAACAGCCCTTTTGTGTCTTA
GACACAAAATTCTGCAGCTAACAGACGGATGGTTTTGCATTAATTTACTTCTTTTTAATTGCTT
AGTGTTTTAATTATACTTGTTTAATCCACATTAATGTACACAAATGACAATAAATGTTAAGATA
TTA

hide sequence

RefSeq Acc Id:

XM_017602422 ⟹ XP_017457911

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	155,883,336 - 155,919,921 (+)	NCBI
mRatBN7.2	X	150,841,069 - 150,877,652 (+)	NCBI
Rnor_6.0	X	152,996,235 - 153,034,289 (+)	NCBI

Sequence:

show sequence

CATGCTGTGTAGCCAAGGATGACCTTGCACTTCTGATCTTACTGCCACCATCTTCCCTGTGCTA
AGAACACAGGAATTTACCATAGACCTAGTTATGTGATGGCGAGAATGGAACCCAGGACCTTGCA
GATGCTCAACAAGTAGTGATCCAACTGCAGTACATTTGTCGTCCCTTTCAGGTTTACTGTCTTG
TTGGAAGGGGAATTGGATTTCCGAGATCAGTCAGGTCTGAGGGAAAGCTGGTGACATGGAAGCC
CCAGCCCCAGACCTTTCTGGCACACATCCTTGCTCCTTTGCCTGGGGAGTGTTGTAATTTGAGA
AGTGGCTTATTTGGTTCTAATGTGTTAGGAAACTTCTAGACAACATGGCTATTGAATCTATCAA
AGGGAAAACTCATAAGTTCTGGGTTTAGTACAAGGCCTAGCATAGATGTGGCTGCTATAGTGGG
GATGAGCTTCACCTGCTTGCCCAGTTCCTGTGTGGAGGAAACCGGTAGCCACAGTCTCTGGGGT
CTTGGAAAGGAGTATTTCCTTGAGGTGCCTTACAGAAAATAAGTTAAGACAGCAAAAAAGGCCT
AGTGTATTGGAGGGACCAACAGGGGCCATTTGCTTTCATGCAAAGAGGAGAGGGGCTGTCTAAG
GTTTTCACACTTGTTAGCATGAAAAGACCGAGGGACTGAAGGCTCAGGCTTTAGTGGTCTGCAT
ACAGGCACTGACTCTCCCATACATTCTGCCTCATGGAGTCACTACACATGCCTGTTAAGATGCA
AACTGCTGGGTTTATACAACCATAAGAGCAACTGAACTCTGATGTGGCAGCTTTAGTGCCATGA
TGAGGTTCCATTCCTGGCATGTAGAAGGTTCAGCCTGCCTGGACTGCTCACTTGGTACAGTTTA
TGGGAGAGCAGGCTCTTGCTGATGTGGCTAATTTACTTTGGTCTTGGCCTCCTTCCCTTCCTCC
TTTAGTGTGCCCCCCCACTTCCATGGAAACATATCCAGGTCCTGCCAGCTGAACTAGGTCAGAG
ACTAGCCCTGGAGGGACCCAAGGGTTGGCAGACCCCAGGGAGAAAGGCCTGTCTGCCTTAGCAC
CTCCAGAGCCTTGCTTTCTATCCTGTCCACACCTCTGAACCTCCCAGGCTCTCTTTATGTCCAA
AAGATCTAGTGTAGTTATTAAGGGCAATATCCAAACCCACAGTCTAGGCCTTTCCTCTTCCTCA
GCTTTGGGTCTCTCAGCCTGGAGAACAGACTATGAGGAAGCTGTTGGCTCTAACCAGAGTCTCC
TCATCTGATGCTGAGGCCACTCCTTAGCACTGGGTTCTTGTGAGGAAACAGGATGAGGAGCCAA
CCTCAACTAGGTCTGCAAATACCCACTTTGTCCTGTACTGATTAAAGAACACTGGCTGGCTGTC
TTCCAACAAACAGATTTAAAGTCACTACAACTTGACTTACGTCAAGCTGCCCAATGATATTCCT
GACTTGACAGCAGTCCAGAAATGTAGATCATTTCATTCTCATCTTACAGGTGATAAAACTGAGG
CAGCCCAGAGAAATTAACTGATTTGTCCAAGGCCTGACAGCTAGTGTAAGAAAGATGGTCGAGT
GCTAAAACAGCTGGTTCCCTGAGCCCTTGCCCTACCTCCAAGTCATTTTGCCTTTTCTCAAAGG
TGATGTGCCTGAGATGTGCTTCAGTCCTACTGTCTGGCTCAGCGCCATCCTCGTCTCCATGACA
TCGTTAGAACGTCTTTATTACCACCAGCTCCCTTCCCCAGAGTCTTTCCATTAGCACTGTCTGT
GGGCTACTCTTAATAACTGACTAGAGCAGACAGTTCTTGACCGCCCACAGGTTTCCATATTCTC
CAGGTGAGCAGCCATGGCTATAAAGGTAGGTGGAATGTGTGCTTAGTCCTTGCCCTCTCATACA
TTCTGAATTCCATTGAGTCTTTTCAACCCTGATACCTGCAGGGGAACCTGCATGATCTTGGTGT
GCTAAGATCACACCAGGCTCATTTCACTATTATGATGTCATACTTGAGGCTAGGTGCTAGGCTA
GAGAAAATATATTCATTTACTTCTGGAGACTCAAAAGCATAGCAATAGTACCATCTTAGTCAGG
AGCCCACTGAATCCACTAATTGCAGAACTGAAAGATAAACATCATGAGTATTTCTTCATTAGGA
GATATTGGAAAAGGGAGGCCTTTACCATCAGGAGAAGAGGAGCGCAATAATATCCTAAAACAGA
TGAAAGTACGAACTACACTGAAGGGTGACCAGAGCTGGATCACCAAGCATGACAACTCTGAGGA
CCATACCAAAGAGCCATTGTCAAGTCAAAACCGAGCTACATCCTTCTCATCTGTGAGAGACGAA
TCAAATGTCAGGTCTCCAAACACAAGAGCTCCAGCTGGTTATATCATCCGGGGAGTGTTCACCC
GAACAATAGATAGTTCTTCTCACTCCCAGCATCACCCTTCTAAGACCAATGGCGCTGCAAGAAG
TGCTTCTGGGCAGCTGGGAACAGCTAATTCTGGTCGTCCTCTTCAGTCGCCTGGCTATAAGATG
ACTACAGAAGATTATAAGAAGCTAGCCCCGTACAACATCAGGTGCAGCTCCGTATCAGGGACTG
AGGAAGAGGAGGTGCCATTCACCCCAGATGAGCAGAAACGGAGGTCCCAAGCTGCAATTGGTGT
TCTCAGGAAGACAGCACCACGGGAGCACTCTTACGTCCTTTCAGCAGCTAAGAAGACCACTAGC
AGTCCTACCCAGGAACTACAGTCGCCATTTATTGCAAAAAGGGTTGATGTGGTAGATGAGGACG
TGCTTCCTGAAAAGAGACAAGAACCACCTGCTCTGACAAGACATACTCCTGGCTTAAGTGTGGA
TGGAAGAAGGACCCAAATATCTCAGGAGATTCTAATTGAGTGCATGCCAAATATGCCTAGCCCT
TCTGGAAACCAGGAACCCAGCTTGACAACTGAGAAGATTGTCCATCTGCAGATCTCAACCCCCA
GAGCAGGACTCCACCTGGTGGCCCCAGACCTGGAAGCCCTGAGCCCCTCAGGTGATTATAAGAC
AAATATGGACCCCAAGACCATCGAGGCCTGGCAAGAGATGCCTGATGATATGAAAGGTGACCAA
GGAGACCTACTAACAACCACTGAATATGCTGCAGATCCCAGCACCCCCCATCTGCAGAGCAACC
CCAGTGCACTCAATCAGCTCGTCAAACATGATGCTTGTGCCAGCAGCACTCCAGATGCTTGTGA
GAAGAAAAATACAGCCCCCAAGAACATCCACGCCTTACAGGAGATACATGGTGACTCAAATGTG
GCTTCTCAACAACTTGCAGATCTCAGCATTCCAAAGCCACAGAGTAGCCCCAGCAAACCCCAGC
AGCAAATCAAAGTAGAGGATTATACCAACAATCAGAAAAGCCCTTCAAGCAGCATTGCCACTGT
TACTGTCTCCAACACCTCCGAACAATCTCAATTGACTGTTGCTGGTGCCTCAAGTGAGGTGGAC
TCCAGCTCAACTATCAAAGGGATTCTTTTCGTGAAGGAATACATGAATGCTAGTGAAGTGTCTT
CTGGGAAGCCAGTGTTTTCACACTGTGACAGTACCAGCTGCATTGAAGACTCATTGGATCTGGC
AAAGAAAGCCCCCCGTGATGGCACTCCACCTTCTGACAGACCAACTGAAGGGGTCTGTACTTAC
TGTAGCCGTGAGATCCAAGACTGTCCGAAGATTACCCTTGAACATCTTGGCATCTGCTGCCATG
AGTATTGTTTTAAGTGTGAGATTTGCAATAAACCAATGGGAGATCTCCTAGATCAGATCTTTAT
TCACCGTGACACCATCCACTGTGGGAAATGCTATGAGAAGCTCTTCTAGGCTGAACAGAAGCTG
ATGATCCCCAGCTGTCTTTGGCTGTCCAGTTGACCCAAATTGTTGGCTCCTCCTCCCTTATATC
CTCCATGGTTCCACTGTACTTCTGCCCACCTTGTACTGAAGTAGCATACATTCAAGATTGTATA
ACAATGATGTTATAATTACTTTTGTGTAGCCTTTTATACCTTAGGAATATCTCAGTTCAGGCTT
GAAATCCTTGCTTCCAATATAAATGAATCCACTTTGACTTCCCTAAGATATGTTGGCTTTGTAA
TGAGTGCAGATGGCCCAGTATGTTAGACATGGGTACAAGTCTAGGTATCAGCTTATGCAGACTT
TCTGAAACTTCTGATGGGCCAAGCCAAAGAAACTGTTGACGATCCCTGGTAGGGAAATTACAGG
CATTGAATGCTAAGGGTTGGCAATAGGCTAATGTTTAGCTTGTCTATTCATTCTGTGTGAGTGT
GTGGATGTGTGTATTTTTAAATTTCTCACAATTTTTGAAATAGTTAATTGTCTTTGATTGAATT
GTGTAGCAGATTTAAATTACCTCCTCCCATTCTCCTTTGAGTTTTTCCAGTCAGTTATGTCAGC
ACATGTTGGAAAGTTTACCCAGCTTTAAATTTGATAAGATACACTATTAGAAGGCTTCTAACCA
AAGGGATATCCTTGTCCGTTTGAATTTTCATAGTTGGTTAAAATCTTTAGCTTCAGTATTTCTG
GACTTTTATTCTCTGAGCTGCTTTTAAGGTGTATAGATCTTAAAAGGGTAAAGAAGAAAACAGA
TAAGGTTTCTTGAGACTTCGCCACACACCCGGCATTACCACAAAGCACTGGCTTGGATCTAATT
AATAATCTCTAAGATATTCTCATCTTCAGTTTAGAAATGAAGAAAGTAATGCTCAGAGAAGTGT
GAAAACTCCTGTAGAACCACTGTTGTCTCTCTCTTTCTCCCTTTCTCCTCCCCCAACCCCCCAG
AGCCCATACTTTCTCCAGAAGCGATAACCACAATGGCACTGACTATGTGTCAGGCTGTTTGAAG
GGCCCCTGTTCCTAATGTGAAATATTTCCCTGAAGTGTAGTGTTAGAAATGGTTTTGAAAAGTG
TGAAATTCACCCCATCTCTGGGCTTCTTGGGTCCCTCCTCGAAACACTACGGTAATTTAACTGC
TCCCTTTCCCTCTCCTACAAACAGAGGTGTTCACATGGGAACAAATTTGGCTTATGCAACTTCT
CAAAGAAAAGCTTGCTATCCAGTGAGATGTGCAGTAGGCTCTCTGCCCTGATCACATTGCCTTT
TGTGACCTGTTTTCTAGTCCTGAATCTGTCTCAAACTAACATCAACTTCTAGGTCCCCAGGTAC
TCAAACACTGCCAGCTGATGTCTGACCCAGCAGACGCAGGTTCATCCCTGAGTTTACTAATACA
CTGCTCGGATTCAACTTCACTCTGCTGCCTTTGGGCTCGGCCTTAAATTGGAAGCTCCTTGAAA
GGAAAAATAGCCCTCAAGACTTGGGGATGCAAAATGAAGGCCTCTTTGTTGGATTTACTTATAA
CTCTTCTCTTTCTCCAGAATTTGAACCCTAGACACATTTGAGTGTGGACTTGTTCTTCCTATCA
TGTAATCAGAGAAGAACATTCTATTTATTTGACTATCTGTTACATGTACTCTGAAGAGGAGAAG
GAGTACATTGTTCCACACCCAGATACTAATTATGAACTAGTCTTCTCAAGTTCAGCTCTAGGAT
GGGACTTAGCAGATGATGGGCATTACCATATGTGTGCCAAATGAATTAATAAGAGAACACTAAG
TTACTCCCTTAGTTACCTGGGCATGTCAGTACAGGCCTCAGGGATGGAAGAAGAGGCTCTGTAT
CTGATGAATTCCCCACCTTAAAGGTGTACTCTGCCATTTAAAGAGTTTTAGAAATATGGAATAT
ACTCAGACAGCTTGTAAGGTTAGTACTGATTTGAATCCAAAACAGCCCTTTTGTGTCTTAGACA
CAAAATTCTGCAGCTAACAGACGGATGGTTTTGCATTAATTTACTTCTTTTTAATTGCTTAGTG
TTTTAATTATACTTGTTTAATCCACATTAATGTACACAAATGACAATAAATGTTAAGATATTA

hide sequence

RefSeq Acc Id:

XM_039100265 ⟹ XP_038956193

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	155,874,138 - 155,919,921 (+)	NCBI
mRatBN7.2	X	150,831,869 - 150,877,652 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001419950	(Get FASTA)	NCBI Sequence Viewer
	NP_001419951	(Get FASTA)	NCBI Sequence Viewer
	NP_001419952	(Get FASTA)	NCBI Sequence Viewer
	NP_001419953	(Get FASTA)	NCBI Sequence Viewer
	NP_001419954	(Get FASTA)	NCBI Sequence Viewer
	XP_006229582	(Get FASTA)	NCBI Sequence Viewer
	XP_006229584	(Get FASTA)	NCBI Sequence Viewer
	XP_017457911	(Get FASTA)	NCBI Sequence Viewer
	XP_038956193	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL82841	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000069186
	ENSRNOP00000069186.2
	ENSRNOP00000087665.1
	ENSRNOP00000106478.1
	ENSRNOP00000110152.1

RefSeq Acc Id:

XP_006229582 ⟸ XM_006229520

- Peptide Label:

isoform X1

- Sequence:

show sequence

MSISSLGDIGKGRPLPSGEEERNNILKQMKVRTTLKGDQSWITKHDNSEDHTKEPLSSQNRATS
FSSVRDESNVRSPNTRAPAGYIIRGVFTRTIDSSSHSQHHPSKTNGAARSASGQLGTANSGRPL
QSPGYKMTTEDYKKLAPYNIRCSSVSGTEEEEVPFTPDEQKRRSQAAIGVLRKTAPREHSYVLS
AAKKTTSSPTQELQSPFIAKRVDVVDEDVLPEKRQEPPALTRHTPGLSVDGRRTQISQEILIEC
MPNMPSPSGNQEPSLTTEKIVHLQISTPRAGLHLVAPDLEALSPSGDYKTNMDPKTIEAWQEMP
DDMKGDQGDLLTTTEYAADPSTPHLQSNPSALNQLVKHDACASSTPDACEKKNTAPKNIHALQE
IHGDSNVASQQLADLSIPKPQSSPSKPQQQIKVEDYTNNQKSPSSSIATVTVSNTSEQSQLTVA
GASSEVDSSSTIKGILFVKEYMNASEVSSGKPVFSHCDSTSCIEDSLDLAKKAPRDGTPPSDRP
TEGVCTYCSREIQDCPKITLEHLGICCHEYCFKCEICNKPMGDLLDQIFIHRDTIHCGKCYEKL
F

hide sequence

RefSeq Acc Id:	XP_006229584 ⟸ XM_006229522
- Peptide Label:	isoform X2
- UniProtKB:	A6KSY8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSISSLGDIGKGRPLPSGEEERNNILKQMKVRTTLKGDQSWITKHDNSEDHTKEPLSSQNRATS FSSVRDESNVRSPNTRAPAGYIIRGVFTRTIDSSSHSQHHPSKTNGAARSASGQLGTANSGRPL QSPGYKMTTEDYKKLAPYNIRCSSVSGTEEEEVPFTPDEQKRRSQAAIGVLRKTAPREHSYVLS AAKKTTSPTQELQSPFIAKRVDVVDEDVLPEKRQEPPALTRHTPGLSVDGRRTQISQEILIECM PNMPSPSGNQEPSLTTEKIVHLQISTPRAGLHLVAPDLEALSPSGDYKTNMDPKTIEAWQEMPD DMKGDQGDLLTTTEYAADPSTPHLQSNPSALNQLVKHDACASSTPDACEKKNTAPKNIHALQEI HGDSNVASQQLADLSIPKPQSSPSKPQQQIKVEDYTNNQKSPSSSIATVTVSNTSEQSQLTVAG ASSEVDSSSTIKGILFVKEYMNASEVSSGKPVFSHCDSTSCIEDSLDLAKKAPRDGTPPSDRPT EGVCTYCSREIQDCPKITLEHLGICCHEYCFKCEICNKPMGDLLDQIFIHRDTIHCGKCYEKLF hide sequence

RefSeq Acc Id:

XP_017457911 ⟸ XM_017602422

- Peptide Label:

isoform X1

- Sequence:

show sequence

MSISSLGDIGKGRPLPSGEEERNNILKQMKVRTTLKGDQSWITKHDNSEDHTKEPLSSQNRATS
FSSVRDESNVRSPNTRAPAGYIIRGVFTRTIDSSSHSQHHPSKTNGAARSASGQLGTANSGRPL
QSPGYKMTTEDYKKLAPYNIRCSSVSGTEEEEVPFTPDEQKRRSQAAIGVLRKTAPREHSYVLS
AAKKTTSSPTQELQSPFIAKRVDVVDEDVLPEKRQEPPALTRHTPGLSVDGRRTQISQEILIEC
MPNMPSPSGNQEPSLTTEKIVHLQISTPRAGLHLVAPDLEALSPSGDYKTNMDPKTIEAWQEMP
DDMKGDQGDLLTTTEYAADPSTPHLQSNPSALNQLVKHDACASSTPDACEKKNTAPKNIHALQE
IHGDSNVASQQLADLSIPKPQSSPSKPQQQIKVEDYTNNQKSPSSSIATVTVSNTSEQSQLTVA
GASSEVDSSSTIKGILFVKEYMNASEVSSGKPVFSHCDSTSCIEDSLDLAKKAPRDGTPPSDRP
TEGVCTYCSREIQDCPKITLEHLGICCHEYCFKCEICNKPMGDLLDQIFIHRDTIHCGKCYEKL
F

hide sequence

Ensembl Acc Id:

ENSRNOP00000069186 ⟸ ENSRNOT00000088234

RefSeq Acc Id:	XP_038956193 ⟸ XM_039100265
- Peptide Label:	isoform X3
- UniProtKB:	A6KSY8 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000087665 ⟸ ENSRNOT00000096881

Ensembl Acc Id:

ENSRNOP00000106478 ⟸ ENSRNOT00000151616

Ensembl Acc Id:

ENSRNOP00000110152 ⟸ ENSRNOT00000161009

Protein Domains

LIM zinc-binding

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2JUQ6-F1-model_v2	AlphaFold	A0A0G2JUQ6	1-483	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1586351	AgrOrtholog
BioCyc Gene	G2FUF-691	BioCyc
Ensembl Genes	ENSRNOG00000051704	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000088234	ENTREZGENE
	ENSRNOT00000088234.3	UniProtKB/TrEMBL
	ENSRNOT00000096881.2	UniProtKB/TrEMBL
	ENSRNOT00000151616.1	UniProtKB/TrEMBL
	ENSRNOT00000161009.1	UniProtKB/TrEMBL
Gene3D-CATH	Cysteine Rich Protein	UniProtKB/TrEMBL
InterPro	Cell_Prolif/Cornif_Regul	UniProtKB/TrEMBL
	Znf_LIM	UniProtKB/TrEMBL
KEGG Report	rno:689949	UniProtKB/TrEMBL
NCBI Gene	689949	ENTREZGENE
PANTHER	PTHR15468:SF2	UniProtKB/TrEMBL
	ZNF185	UniProtKB/TrEMBL
PhenoGen	Zfp185	PhenoGen
PROSITE	LIM_DOMAIN_1	UniProtKB/TrEMBL
	LIM_DOMAIN_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000051704	RatGTEx
SMART	LIM	UniProtKB/TrEMBL
UniProt	A0A0G2JUQ6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AH10	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LWZ6_RAT	UniProtKB/TrEMBL
	A0ABK0M784_RAT	UniProtKB/TrEMBL
	A6KSY8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-06	Zfp185	zinc finger protein 185	LOC689949	similar to zinc finger protein 185	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-11-19	LOC689949	similar to zinc finger protein 185			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar