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Gene: Ccdc157 (coiled-coil domain containing 157) Rattus norvegicus

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Symbol:

Ccdc157

Name:

coiled-coil domain containing 157

RGD ID:

1584653

Description:

Orthologous to human CCDC157 (coiled-coil domain containing 157); INTERACTS WITH atrazine; bisphenol A; copper atom.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

coiled-coil domain-containing protein 157; hypothetical protein LOC681091; LOC681091

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CCDC157 (coiled-coil domain containing 157)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Ccdc157 (coiled-coil domain containing 157)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ccdc157 (coiled-coil domain containing 157)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CCDC157 (coiled-coil domain containing 157)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CCDC157 (coiled-coil domain containing 157)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ccdc157 (coiled-coil domain containing 157)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CCDC157 (coiled-coil domain containing 157)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CCDC157 (coiled-coil domain containing 157)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ccdc157 (coiled-coil domain containing 157)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ccdc157 (coiled-coil domain containing 157)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	CCDC157 (coiled-coil domain containing 157)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ccdc157 (coiled-coil domain containing 157)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ccdc157 (coiled-coil domain containing 157)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ccdc157 (coiled-coil domain containing 157)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ccdc157	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ccdc157	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	83,236,010 - 83,255,012 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	14	83,237,956 - 83,267,666 (-)	Ensembl				GRCr8
mRatBN7.2	14	79,012,433 - 79,031,458 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	79,014,925 - 79,031,671 (-)	Ensembl				mRatBN7.2
Rnor_6.0	14	84,376,167 - 84,393,235 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	84,376,591 - 84,393,421 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	14	85,058,372 - 85,074,898 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	14	84,769,678 - 84,777,779 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	14	77,925,376 - 77,942,444 (-)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

oligoasthenoteratozoospermia (ISS)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

atrazine (EXP)

beta-lapachone (ISO)

bisphenol A (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

copper atom (EXP)

copper(0) (EXP)

Cuprizon (EXP)

cyclosporin A (ISO)

endosulfan (EXP)

folic acid (ISO)

gentamycin (EXP)

leflunomide (ISO)

paracetamol (EXP)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

rotenone (ISO)

sunitinib (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

valproic acid (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Ccdc157
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	83,236,010 - 83,255,012 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	14	83,237,956 - 83,267,666 (-)	Ensembl				GRCr8
mRatBN7.2	14	79,012,433 - 79,031,458 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	79,014,925 - 79,031,671 (-)	Ensembl				mRatBN7.2
Rnor_6.0	14	84,376,167 - 84,393,235 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	84,376,591 - 84,393,421 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	14	85,058,372 - 85,074,898 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	14	84,769,678 - 84,777,779 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	14	77,925,376 - 77,942,444 (-)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

CCDC157
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	30,356,624 - 30,378,673 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	30,356,635 - 30,378,673 (+)	Ensembl			hg38	GRCh38
GRCh37	22	30,752,613 - 30,774,662 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	29,083,036 - 29,102,818 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	22	14,552,315 - 14,572,502 (+)	NCBI		Celera
Cytogenetic Map	22	q12.2	NCBI
HuRef	22	13,714,315 - 13,734,501 (+)	NCBI		HuRef
CHM1_1	22	30,711,747 - 30,731,992 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	22	30,819,964 - 30,842,006 (+)	NCBI		T2T-CHM13v2.0

Ccdc157
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	4,091,123 - 4,110,999 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	4,091,123 - 4,110,293 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	11	4,141,123 - 4,160,293 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	4,141,123 - 4,160,293 (-)	Ensembl			mm10	GRCm38
MGSCv37	11	4,041,126 - 4,060,296 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	11	4,043,612 - 4,060,223 (-)	NCBI		MGSCv36	mm8
Celera	11	4,637,467 - 4,656,637 (-)	NCBI		Celera
Cytogenetic Map	11	A1	NCBI
cM Map	11	2.9	NCBI

Ccdc157
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955455	4,608,216 - 4,614,548 (+)	Ensembl
ChiLan1.0	NW_004955455	4,601,941 - 4,616,385 (+)	NCBI	ChiLan1.0	ChiLan1.0

CCDC157
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	40,324,050 - 40,345,733 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	43,022,686 - 43,044,371 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	11,393,064 - 11,414,508 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	29,194,950 - 29,215,795 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	29,194,950 - 29,214,932 (+)	Ensembl			panPan2	panpan1.1

CCDC157
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	26	23,504,167 - 23,520,311 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	26	23,504,882 - 23,518,927 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	23,375,315 - 23,390,106 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	26	23,888,354 - 23,903,149 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	26	23,888,351 - 23,905,411 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	26	23,589,796 - 23,604,590 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	26	23,852,618 - 23,867,399 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	26	23,912,975 - 23,927,765 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ccdc157
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	116,424,110 - 116,438,165 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936904	296,162 - 310,722 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936904	295,263 - 310,066 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCDC157
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	14	47,335,500 - 47,351,171 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	50,419,992 - 50,434,232 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CCDC157
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	13,237,213 - 13,256,200 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	13,237,337 - 13,256,119 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666045	112,890,445 - 112,909,014 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ccdc157
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624747	6,687,264 - 6,693,928 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624747	6,679,685 - 6,695,187 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ccdc157
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	11	73,125,209 - 73,143,689 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ccdc157
244 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	70
Count of miRNA genes:	61
Interacting mature miRNAs:	70
Transcripts:	ENSRNOT00000006911
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1582236	Gluco22	Glucose level QTL 22	3.3	0.0164	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	77640071	96755654	Rat
9590294	Uminl4	Urine mineral level QTL 4	5.66	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	14	59848686	104848686	Rat
2300197	Scl59	Serum cholesterol level QTL 59			blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	14	77914838	104348525	Rat
70214	Niddm28	Non-insulin dependent diabetes mellitus QTL 28	4.06		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	14	39009444	84009444	Rat
70153	Bp59	Blood pressure QTL 59	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	14	72970210	87582095	Rat
70187	Pancm5	Pancreatic morphology QTL 5	16.7		pancreas mass (VT:0010144)	pancreas weight to body weight ratio (CMO:0000630)	14	30674469	85041098	Rat
631523	Pia13	Pristane induced arthritis QTL 13	3.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	14	33424686	102238540	Rat
1582259	Gluco23	Glucose level QTL 23	3.1	0.0008	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	14	74255551	109089856	Rat
1582197	Gluco27	Glucose level QTL 27	3.4	0.0006	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	14	77640071	96755654	Rat
634328	Hc5	Hypercalciuria QTL 5	2.3		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	14	62398852	107398852	Rat
1582250	Gluco26	Glucose level QTL 26	3.3	0.0009	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	77640071	100078267	Rat
2317879	Alcrsp27	Alcohol response QTL 27	3.3	0.63	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	14	60854936	105854936	Rat
1641900	Alcrsp11	Alcohol response QTL 11			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	14	74255551	109089856	Rat
631839	Niddm37	Non-insulin dependent diabetes mellitus QTL 37	3.37		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	11334716	100078267	Rat
1582255	Gluco29	Glucose level QTL 29	3.1	0.0025	blood glucose amount (VT:0000188)	absolute change in blood glucose level area under curve (CMO:0002034)	14	77640071	96755654	Rat
9589034	Epfw11	Epididymal fat weight QTL 11	6	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	14	59848686	104848686	Rat
1582209	Gluco20	Glucose level QTL 20	3.8	0.0005	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	77640071	96755654	Rat
1300136	Rf22	Renal function QTL 22	3.9		renal blood flow trait (VT:2000006)	absolute change in renal vascular resistance (CMO:0001900)	14	42616258	99224555	Rat
1549834	Scl45	Serum cholesterol level QTL 45	5.8		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	14	65920283	99224555	Rat
738037	Hcas6	Hepatocarcinoma susceptibility QTL 6	2.93		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)	14	39411170	87582095	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	161	91	90	59	88	59	6	352	188	11	140	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001432845	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001062582	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_002724989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC119662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	MT981182	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000006911 ⟹ ENSRNOP00000006911

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	83,237,956 - 83,255,211 (-)	Ensembl
mRatBN7.2 Ensembl	14	79,014,925 - 79,031,671 (-)	Ensembl
Rnor_6.0 Ensembl	14	84,376,591 - 84,393,421 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000129263 ⟹ ENSRNOP00000107392

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	83,237,956 - 83,258,487 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000145555 ⟹ ENSRNOP00000105936

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	83,237,956 - 83,267,666 (-)	Ensembl

RefSeq Acc Id:

XM_001062582 ⟹ XP_001062582

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	83,236,010 - 83,255,012 (-)	NCBI
mRatBN7.2	14	79,012,433 - 79,031,458 (-)	NCBI
Rnor_6.0	14	84,376,167 - 84,393,235 (-)	NCBI
Rnor_5.0	14	85,058,372 - 85,074,898 (-)	NCBI
RGSC_v3.4	14	84,769,678 - 84,777,779 (-)	RGD

Sequence:

show sequence

GTCTCCAACTCAATGGCAAGATGGCGACGACCCAGAGAAAAGCCGCGGAGGCACTTCCGGCCCC
GCCCCCTCGCCGTGTCTCACTTCCAGCCCCGCCCCGCGTGCACGATGGCACGGTACGCCGTTGC
TATGGCAGCGTCCTGGGCGCCCTGCTTTAGAGTTTCGAGGGATCCCTGGAGCCGCAGGCGCTCC
GGAGGAAGTTCTGTGAGCTTGCCAGACACAGAGCTGAGGCTGCGACGCCGGAGACAGGGATGGG
AGGGCCGCTTGCGGCCAGCCCTGAACCAGGAAGCCAGGAGCCAGAAAGCCAGGCACCTGCATGA
GTCCCGGACCTCACAGCCTAGTCCAAAAGCTGGACATAGTCGGTCACTCCAGCTTCATGGGCAA
ACATCTGTGAGAGGAGCTGTGGGGATGGCACACCTGCTAGGCAGCCAGGCTTGTATGGACAGCC
TGCGCAAGGACCTCACCGACCTGCAAGGCACCATTGTGGATGTGTTCTCCCGTGCCGGGCCTGT
GCGCTTCCCCTCCTGGAAGTTTCCTGACCGTGTGGCCTGTGACCTTGACATGGTGGCCCTTCTA
GAGCACTATGACCATGTGCCAGGTGACCCTGAGTTCACACAGTTGTCCCATGCCGTGCTGCTGG
AGCTGGTCATTGACAGGCTCCTGCTGCTACTTCAGAGTTGTGCCAGCTACGTGGAGAACCTCAG
TTTGGAGCAGATGATGCCTCCTGCCCGGGTTGCAGGGCCATGCATGTCCGTGGGGCTTACAGTA
AGGCGCTTCTGGAGCAACCTGCTTAGGCTGGGCATGCACTACCAGCAGGTAGTCCCCCAGAAAA
GAACAAACCAAGGGGAGATTTCTATCACCAAGCCCACAGCTAAGGGTGAACCAGCCAGGAGCCC
TGAATGTATGACTGCCAAGTTCATCAAGCCCCCCTCCCCCGTGCCAGGTTTGCCTTTGATCTGC
CAAGGGCTGCAGAGCCTCCCTGTCAGAGTCTCCCTGCGGAGCCCAGGTGGGACCTCTGAGAAAA
CTAAGAGCGTCTACTCCCAGACCGTCGAGACAGCCTTGGTACCCTGTGATGCTTGCACCAGTGT
CCAGGGCAGCCTATGGGAGGTGGGCAAGGTGATTATCAACCTATGTCAGAGCCAAAACTTGCCT
TCATCCTTGGGCCAGTTCCAGAGATTGGTGCAGGACAGCCTGGGGCTTAAACCACTGCCAGCTG
CCACCGTGGGCCACTGGGCAGCAGAGCAGAGCAAAGACCTGACTCGTCTCAATAAACACGTGGG
GGCCCTCACCCAGCTTGTTGGGCCCCTTAGGGCCCAGCTGGAAGAGGCTGAGGGGCAGAAGGAT
GGACTGAGGAAGCAGGTGAGCAAACTGGAACAGACCCTGCAGCAGGAGCAAGGGGAGCGGCAGC
GGCAGACAGAAGAGGCTAAGCGGACCCTGGCCCAGTTCGAGCATGACAGGCACCAGCTGCTCAC
AGAAACATGTGACCTAAAGACAAAGGTGGCCATTCTGGAGGAAGACCTGAAACAGCAGCAGAAG
TCCATGCAGGCCATGGAGGCAAAGGCCCAGCAGCTGGAAGAGGAAGGTGAGCGTAGGGCGGCAG
CTGAGAGACAGGTGCAGCAGCTGGAGGAGCAGGTGCAGCTGCTGGCAGGGCGGCTGGATGGGGC
TAGCCAGCAGATCCGCTGGGCTAGCACAGAGCTGGACAAGGAGAAGGCCCGCGTCGACAGCATG
GTCCGTCATCAGGAGTCCCTGCAGGCCAAGCAGAGGACTTTGCTGCAGCAGCTGGACTGTCTGG
ACCAGGAGCGGGAAGAGCTGCGGGGCAATCTGGATGAGGCTGAGGTCCAGCGGTCTGAGTTGGA
GGAGCAGCTGCAGAGCCTCCAGAGCGAAAGGGAACAGGGACAGTGCCAGCTGCAGGCCCAGCAG
GAAGTGCTGCAGAGCCTGCAGCAGGAGAAACAGGACCTGGAACAGGTAATTACAGACCTGCAGC
TGACCATCTCAGAGCTGCAGCAGCAGCTGGAGGAACTGAAGGAACGGGAGCGACTGCTGGTGGC
CTTCCCAGACCTGCACCAGCCAGTGGAGGCCCAGATCCAAAGCTCTAGCAATGTCACCCATGAC
ATGGAGAGGCAAGTGCAAGCCAATGACATCCGAATCCAGGTCCTACAGGAGGAGAACAAGCGGC
TCCAGTCCATGCTGACCAAAATCCGGGAGGTGGCCCAGCAGGGAGGCCTCAAGATGGTCTCGCA
GGGCCAGCTCTGGTCCTCTCCCTACAAGGGCATCCAGGGAACAATACCCCCAGCCCAGGCCCAG
AGTGCATTGTCAGGACCCACAGGCAGACGGCAGTCTCCTGGCAGCAAGACAAGCGGTTCAGGCA
AGACCCATCCAGGCGGGCCCCGAACATCCCCCTCTCGGCAGCCTGGCAGCTTGCCCAGCAAGTC
CTCTTCGGGGGATGGAGCCCATTCAGCCACCTGCACCCAGAACCCCATAAGGGCCTTGGCCAGG
CTGAGGAGAAAGCTTTCACCGAACAGAGGTCAGGCTGGTTCTCCATACCAGCCCCAGGAGCGGC
CCATGTAACCCGCAGCAGGGGTAGGGCTGGAGGGTAGGTGGCTAGCAACCCCCCATGGAATAAA
AGCCCCAGCCATCTGCCCACAGCTATCTTGGCCTCAGCGTGGCTGAGCTGGGGGAACAGACCTT
CCCTTCTTGTTGGGTAAGGGCCTCTGTGATCCCACCATGCAGGTCGCTGGCCAACAGAAGCCTG
GCACTGAGTTGGGAGCTTCCTGTTTGCTCCAGATGGGCCTGTGGGAGGACCACACTGAGGGGTA
GCCAGGTCACCTGAGCAGAGTGAAGCACAGCCTTCCCATAGAAAGGGCTGAGGGGACTGGGTTT
CCTGACGGCACTCAGGTTAGGACTCGGGTGTGAGCACACATCTGAAATAAGGAGCCAGAGGCCA
GGAGCTTGCTGCTCGCCCTCTGGTTCAGCAAGGCAGGCAGAGAACAGTGTTGTTTTTGCCTTTG
TCGCCCACCCGGGCTCTGCATCTCATGCAGACCAAAGAGCATCAGGCAGCTCACCAAAGAGCTT
GCTCCTCTAGGAACTGCTGCGAGGTCCCTCTCAAGCCCTACAGGTCAGAGCCCCACCAAACCAT
GGGAGGAAAGTCCAGGACTTTGGATACCTTAGCCATCCATGGTTTGATGAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001419774	(Get FASTA)	NCBI Sequence Viewer
	XP_001062582	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000006911
	ENSRNOP00000006911.6
	ENSRNOP00000105936.1
	ENSRNOP00000107392.1
GenBank Protein	UDP68719	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_001062582 ⟸ XM_001062582

- UniProtKB:

D3ZKW4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MARWRRPREKPRRHFRPRPLAVSHFQPRPACTMARYAVAMAASWAPCFRVSRDPWSRRRSGGSS
VSLPDTELRLRRRRQGWEGRLRPALNQEARSQKARHLHESRTSQPSPKAGHSRSLQLHGQTSVR
GAVGMAHLLGSQACMDSLRKDLTDLQGTIVDVFSRAGPVRFPSWKFPDRVACDLDMVALLEHYD
HVPGDPEFTQLSHAVLLELVIDRLLLLLQSCASYVENLSLEQMMPPARVAGPCMSVGLTVRRFW
SNLLRLGMHYQQVVPQKRTNQGEISITKPTAKGEPARSPECMTAKFIKPPSPVPGLPLICQGLQ
SLPVRVSLRSPGGTSEKTKSVYSQTVETALVPCDACTSVQGSLWEVGKVIINLCQSQNLPSSLG
QFQRLVQDSLGLKPLPAATVGHWAAEQSKDLTRLNKHVGALTQLVGPLRAQLEEAEGQKDGLRK
QVSKLEQTLQQEQGERQRQTEEAKRTLAQFEHDRHQLLTETCDLKTKVAILEEDLKQQQKSMQA
MEAKAQQLEEEGERRAAAERQVQQLEEQVQLLAGRLDGASQQIRWASTELDKEKARVDSMVRHQ
ESLQAKQRTLLQQLDCLDQEREELRGNLDEAEVQRSELEEQLQSLQSEREQGQCQLQAQQEVLQ
SLQQEKQDLEQVITDLQLTISELQQQLEELKERERLLVAFPDLHQPVEAQIQSSSNVTHDMERQ
VQANDIRIQVLQEENKRLQSMLTKIREVAQQGGLKMVSQGQLWSSPYKGIQGTIPPAQAQSALS
GPTGRRQSPGSKTSGSGKTHPGGPRTSPSRQPGSLPSKSSSGDGAHSATCTQNPIRALARLRRK
LSPNRGQAGSPYQPQERPM

hide sequence

Ensembl Acc Id:

ENSRNOP00000006911 ⟸ ENSRNOT00000006911

Ensembl Acc Id:

ENSRNOP00000107392 ⟸ ENSRNOT00000129263

Ensembl Acc Id:

ENSRNOP00000105936 ⟸ ENSRNOT00000145555

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZKW4-F1-model_v2	AlphaFold	D3ZKW4	1-851	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1584653	AgrOrtholog
BioCyc Gene	G2FUF-15184	BioCyc
Ensembl Genes	ENSRNOG00000005147	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000006911	ENTREZGENE
	ENSRNOT00000006911.7	UniProtKB/TrEMBL
	ENSRNOT00000129263.1	UniProtKB/TrEMBL
	ENSRNOT00000145555.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.287.1490	UniProtKB/TrEMBL
InterPro	CCDC157	UniProtKB/TrEMBL
KEGG Report	rno:681091	UniProtKB/TrEMBL
NCBI Gene	681091	ENTREZGENE
PANTHER	COILED-COIL DOMAIN-CONTAINING PROTEIN 157	UniProtKB/TrEMBL
	PTHR43696	UniProtKB/TrEMBL
PhenoGen	Ccdc157	PhenoGen
RatGTEx	ENSRNOG00000005147	RatGTEx
Superfamily-SCOP	Tropomyosin	UniProtKB/TrEMBL
UniProt	A0ABK0LJN2_RAT	UniProtKB/TrEMBL
	A0ABK0LQI7_RAT	UniProtKB/TrEMBL
	A6IKF1	ENTREZGENE, UniProtKB/TrEMBL
	D3ZKW4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2010-04-21	Ccdc157	coiled-coil domain containing 157	LOC681091	hypothetical protein LOC681091	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-01-09	LOC681091	hypothetical protein LOC681091	LOC683097	hypothetical protein LOC683097	Data merged from RGD:1591513	1643240	APPROVED
2006-11-20	LOC683097	hypothetical protein LOC683097			Symbol and Name status set to provisional	70820	PROVISIONAL
2006-11-19	LOC681091	hypothetical protein LOC681091			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - MGI