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Gene: Fam168b (family with sequence similarity 168, member B) Rattus norvegicus

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Symbol:

Fam168b

Name:

family with sequence similarity 168, member B

RGD ID:

1583985

Description:

Predicted to act upstream of or within axonogenesis and gene expression. Predicted to be located in axon; perinuclear region of cytoplasm; and plasma membrane. Predicted to be active in membrane. Orthologous to human FAM168B (family with sequence similarity 168 member B); INTERACTS WITH acetamide; bisphenol A; tetrachloromethane.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC690188; mani; myelin-associated neurite-outgrowth inhibitor; similar to Protein KIAA0280

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	44,501,466 - 44,534,571 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	44,502,584 - 44,534,974 (-)	Ensembl				GRCr8
mRatBN7.2	9	37,005,569 - 37,038,631 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	37,006,689 - 37,033,723 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	45,503,603 - 45,535,540 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	50,634,778 - 50,666,718 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	48,916,704 - 48,948,647 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	41,305,570 - 41,337,536 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	41,305,570 - 41,337,498 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	40,974,258 - 41,006,776 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	33,543,343 - 33,574,412 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	34,790,646 - 34,822,435 (-)	NCBI		Celera
Cytogenetic Map	9	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

myoepithelioma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

acetamide (EXP)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

benzene (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

caffeine (ISO)

cisplatin (ISO)

corosolic acid (ISO)

coumarin (ISO)

Dibutyl phosphate (ISO)

doxorubicin (ISO)

ethanol (ISO)

folic acid (ISO)

methylmercury chloride (ISO)

nitrates (ISO)

paracetamol (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

sodium arsenite (ISO)

tetrachloromethane (EXP)

thimerosal (ISO)

thiram (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axonogenesis (ISO)

gene expression (ISO)

neurogenesis (ISO)

neuron differentiation (ISO)

Cellular Component

axon (IEA)

membrane (ISO)

perinuclear region of cytoplasm (IEA)

plasma membrane (IEA)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:20716133	PMID:22771904	PMID:23533145

Genomics

Comparative Map Data

Fam168b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	44,501,466 - 44,534,571 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	44,502,584 - 44,534,974 (-)	Ensembl				GRCr8
mRatBN7.2	9	37,005,569 - 37,038,631 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	37,006,689 - 37,033,723 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	45,503,603 - 45,535,540 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	50,634,778 - 50,666,718 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	48,916,704 - 48,948,647 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	41,305,570 - 41,337,536 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	41,305,570 - 41,337,498 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	40,974,258 - 41,006,776 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	33,543,343 - 33,574,412 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	34,790,646 - 34,822,435 (-)	NCBI		Celera
Cytogenetic Map	9	q21	NCBI

FAM168B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	131,047,876 - 131,093,460 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	131,047,876 - 131,093,487 (-)	Ensembl			hg38	GRCh38
GRCh37	2	131,805,449 - 131,851,033 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	131,521,919 - 131,567,474 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	2	124,726,677 - 124,772,234 (+)	NCBI		Celera
Cytogenetic Map	2	q21.1	NCBI
HuRef	2	123,873,156 - 123,918,547 (-)	NCBI		HuRef
CHM1_1	2	131,809,464 - 131,855,017 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	131,482,169 - 131,527,429 (-)	NCBI		T2T-CHM13v2.0

Fam168b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	34,852,307 - 34,882,094 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	34,852,300 - 34,882,146 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	34,813,218 - 34,843,050 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	34,813,219 - 34,843,065 (-)	Ensembl			mm10	GRCm38
MGSCv37	1	34,870,063 - 34,899,895 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	34,757,772 - 34,787,520 (-)	NCBI		MGSCv36	mm8
Celera	1	34,582,736 - 34,613,088 (-)	NCBI		Celera
Cytogenetic Map	1	B	NCBI
cM Map	1	13.34	NCBI

Fam168b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955459	534,682 - 567,652 (-)	Ensembl
ChiLan1.0	NW_004955459	534,682 - 567,651 (-)	NCBI	ChiLan1.0	ChiLan1.0

FAM168B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	44,551,456 - 44,598,055 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	44,567,401 - 44,613,028 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	29,717,246 - 29,762,842 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	131,801,321 - 131,845,956 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	131,801,321 - 131,835,725 (-)	Ensembl			panPan2	panpan1.1

FAM168B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	19	20,734,167 - 20,775,792 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	19	20,738,223 - 20,775,792 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	19	20,981,096 - 21,032,324 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	19	22,059,129 - 22,110,366 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	19	22,059,130 - 22,110,433 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	19	20,699,652 - 20,750,958 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	19	20,959,862 - 21,011,092 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	19	22,002,149 - 22,052,909 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Fam168b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	100,114,596 - 100,146,750 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936469	41,470,957 - 41,504,623 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936469	41,472,044 - 41,503,222 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FAM168B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	57,375,167 - 57,419,054 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	15	57,375,164 - 57,419,257 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

FAM168B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Vero_WHO_p1.0	NW_023666037	772,706 - 811,487 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fam168b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624732	15,110,730 - 15,149,866 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624732	15,110,730 - 15,149,464 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Fam168b
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	111,022,781 - 111,055,437 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Fam168b
202 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	156
Count of miRNA genes:	102
Interacting mature miRNAs:	108
Transcripts:	ENSRNOT00000039480, ENSRNOT00000073440
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2303170	Bp332	Blood pressure QTL 332	3.73	0.027	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	6714888	84474983	Rat
631211	Bw4	Body weight QTL4	5.31		retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	9	5346479	50346479	Rat
7411571	Bw138	Body weight QTL 138	14.3	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	9	40029925	85029925	Rat
2303559	Gluco54	Glucose level QTL 54	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	9	8750492	53750492	Rat
1300180	Bw14	Body weight QTL 14	3.776		body mass (VT:0001259)	body weight (CMO:0000012)	9	31250432	68875676	Rat
8662828	Vetf6	Vascular elastic tissue fragility QTL 6	3.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	9	44458256	99506504	Rat
61450	Ciaa3	CIA Autoantibody QTL 3	6.5		blood autoantibody amount (VT:0003725)	calculated serum anti-type 2 collagen antibody titer (CMO:0001279)	9	29567664	74567664	Rat
1598834	Memor11	Memory QTL 11	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	9	44458256	85262605	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	29567664	83835942	Rat
70218	Cm28	Cardiac mass QTL 28	8.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	41720295	86720295	Rat
9589055	Scfw5	Subcutaneous fat weight QTL 5	5.55	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	9	496645	45496645	Rat
1641911	Alcrsp13	Alcohol response QTL 13			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	6214995	51214995	Rat
1354650	Despr5	Despair related QTL 5	4.01	0.0017	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	9	8750492	53750492	Rat
2290450	Scl57	Serum cholesterol level QTL 57	4.15		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	9	44458256	121768150	Rat
7207805	Bmd88	Bone mineral density QTL 88	4		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	9	31250432	65651574	Rat
61425	Cia15	Collagen induced arthritis QTL 15	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	9	5346479	50416711	Rat
9589158	Gluco65	Glucose level QTL 65	6.82	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	9	496645	45496645	Rat
1581517	Bp284	Blood pressure QTL 284			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	39220186	84220186	Rat
1600365	Mcs20	Mammary carcinoma susceptibility QTL 20	3		mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	9	21031430	49025574	Rat
7411592	Foco8	Food consumption QTL 8	7.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	496645	45496645	Rat
7411656	Foco26	Food consumption QTL 26	9.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	40029925	85029925	Rat
1298088	Edpm11	Estrogen-dependent pituitary mass QTL 11	2.5		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	6214995	51214995	Rat
1641894	Alcrsp12	Alcohol response QTL 12			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	34960590	79960590	Rat
1598823	Memor16	Memory QTL 16	1.9		exploratory behavior trait (VT:0010471)	difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	9	31456061	57460683	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001271134	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596645	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596646	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596647	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596648	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267764	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000039480 ⟹ ENSRNOP00000033168

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	44,502,584 - 44,534,524 (-)	Ensembl
mRatBN7.2 Ensembl	9	37,006,689 - 37,033,723 (-)	Ensembl
Rnor_6.0 Ensembl	9	41,305,570 - 41,337,498 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000127370 ⟹ ENSRNOP00000112438

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	44,502,584 - 44,534,974 (-)	Ensembl

RefSeq Acc Id:

NM_001271134 ⟹ NP_001258063

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	44,502,584 - 44,534,524 (-)	NCBI
mRatBN7.2	9	37,006,689 - 37,038,631 (-)	NCBI
Rnor_6.0	9	41,305,570 - 41,337,498 (-)	NCBI
Rnor_5.0	9	40,974,258 - 41,006,776 (-)	NCBI
Celera	9	34,790,646 - 34,822,435 (-)	NCBI

Sequence:

show sequence

GCGGTGTCTGCGCAGCGTCGGCGGTAGCGGGGGCCGCGGCGAGGCGGGCGGGAGGCAGCGCGGG
CCTAGCGGTCAGCCGCAACCGAGCGTCGTCTGGGCACTGCCCGTCGCCGAGCCACACGCCGTGC
CGGCTCGGGCCGGCGCGCGCCGGTCCCGGAGGCGCAGGCTACCTACTTGAAGTCATGAATCCTG
TTTATAGCCCTGGGTCTTCTGGGGTTCCCTATGCAAATGCCAAAGGAATTGGATATCCAGCTGG
TTTCCCTGTGGGCTATGCAGCAGCTCCTGCCTATTCTCCTAACATGTACCCTGGAGCGAACCCT
ACCTTCCAAACAGGTTACACTCCTGGCACACCTTACAAAGTGTCCTGTTCCCCAACCAGTGGGG
CTGTGCCGCCATACTCCTCCTCCCCCAATCCTTACCAGACGGCTGTGTACCCAGTGAGAAGTGC
CTATCCCCAGCAGAGCCCATACGCCCAGCAAGGCACGTACTACACACAACCTCTGTATGCAGCA
CCTCCTCACGTCATTCACCACACCACAGTGGTGCAGCCCAATGGCATGCCAGCGACCGTCTACC
CTGCTCCCATCCCTCCTCCTAGAGGCAGCGGGGTCACCATGGGCATGGTTGCTGGGACCACAAT
GGCCATGTCAGCAGGTACCCTGCTGACTGCTCATTCTCCAACTCCTGTAGCCCCTCACCCAGTC
ACTGTCCCCACATACCGAGCCCCAGGAACACCCACCTACAGCTATGTGCCCCCGCAGTGGTGAT
CACCCTGCAAATTAATATGTGAGGATGGAGCTGTGCAGTCACTTCATTGAGTCCCACAGCTGGT
GCTGCAGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTAATGCTCTCGACACTTAGCTAAACAT
GACTGCGTCCCAGCCCAGCAGGTCCCAGCTCGCTAGTCTCCAGCTAACTCTGTGGGTTGGTTTT
AAAGCAAATCCTGTTTGTGGACTGCCTGGCAAATTTTTTAGCTAACTGTAATGATAAAAAAGGG
AGTATTATTCTATTCTGAATCATATCTAGTTGAATGCATGTTTATAAAAACAAACAAAAAAGCT
TGCTCAATCTACCTGCAGTGACTGATGCAAAACCCAAAGGACGGGACCGTGTTCTACAGCCTGT
GTCACTCACGCACCTCTGTCATGTATGCTGAGTCTCAGTTACACTCGTGCAAGGGATGTCCTCA
CTGAAGCGTCGGGAGTGCTGGAGGGGACTCTTAGGGTGCTGGGTTTGCCAGTTATGGACATAGA
CTTAGAGTTTTCAGCAGCCTGGTTTTTTTGGCACTGACTGACTGATCCTGGAGGGAGCCGCAGG
GACTGGGAGAGAATGTGAGCCTGCAGCAGCTCCAGACAGCAGCAGCAGCAGGGATAGTAGGGTC
CCTGCTTCACTTCAGCTGGAGTGTGCTCTGGGAAGCAGGGGTCTACCTGAAGCTTAGCAGGAAG
TCTAGGAGCGTGGTGAGCAGTCCAGCTGGGGTGAAGCGAGGTCTGTGTGTCAGTAGAGCAGTGT
CTGCCATCTGAGTTCCCACTGTCTGTCTTACAGGATAATGTCTTTTGTATCTGTTGGGACTGTT
GGAAAAGTCCATTGTAGAAGTAAACTGTCTTCCTAGGAGGGAAGAAGTCAAAGAGAAGAGGCAG
CCGCACTGGAACGGTGGTGTCTTTTGCTTTATTTCGCTTAGGGAACCATTCCTAATGTCCCCTG
AGAATAATGAGTCAGCTGAAAATACAGGCGCTGTGTACTCTCCCATAAAGACTGAAGCTGGGTG
CTGTGGAGCGCGTTGTACATGGAAGACTGGTTACAAGGGAATAAGTGTATTTTTAAGTTAGTTC
CTCATGTTTCTTGTAGAGAAGCAGGGCTGTGATTATGTCTAAAAATGTAGAAATAATGTAGCTT
GTCTTGGGGTTATTCACCTGAGGATGACCTGTCCTCTGTGATTAGTAGGTGAGACCTGGAAAGC
CTGCATAAGTGGCTTTGCCACTCTTCTGTAGCTGAAGGCACCCAGTACCAAGCACATGTGGAAA
GTGGAAAGGCCGGGCAGTTCTGGAACGCACTTGCCTGAAAGGCTCTGTGGTGGGAAAGATTTTG
AGTGCGTACGTAAGAAATCAAGAGGGTTCTTTTCACCTGAAAATATGCCCGACTTGAATCTAGG
AGAGTGTTTCTGTTGAGTATGGACCAAAGGGGCAGGACACGAGGACTTTTCTGGGATCTGTCAA
GTGGGGGTGTGCTTTTTATCTCCTTGTTGAACCCCATTGAATTGCTGGGGCTTTGGAAGGGGTG
CTTGTCTCTGGCAGCTAAGTCAGGGCTTCCATGTCGGTGTGGAGGTCGCCTCAGTAGCAGTCAG
CTTAGCTAGTGGCTGGGTCACCTGGATATTGAACCTTCGGTGACCTTACTTTTATAGTAATGCT
CTCCATAATTTTTTTAGCATTTTATTTTATGAGAAGTTTATGAAGATTTCTGCATGAATCAGTG
TGAACAGAAGGTTTCTCATTCCCAGTGTCCATGAACATAGAATATTTATGGATGAGTATGTTTA
ATTGCTTCGTGAGCACTTAAGAGAGAGTGCGTGTGTGTGACTGGGGTGTGCGTGCGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACGCGCACGCGCGCATGCGAATG
CATCGGGGGAGGGTAGCCCAAGAAAGCACACACTGCACAGAGATAGAAACCTTTGCTGTGGCAC
ATAGCTTGCATCGTGCTTCTGTGTGGGATCCCACCCCTGTGGTGGATGGTGTGCAGTGCTGGGA
GTGTTCCAGTCTCCCAGACTCCATAGACAGAAGGTGGTGTCCAGTGAATAATCACGATCATTGG
GACAAAGGTACCTGTGATTTTTGCATGTGTTTGAAAAAGTCTACTCGCCCACTCTCAACTGAGC
ATAGCTGTCCCCTGCCTGGAAACTCCGCAGGGAGCTCCCAAGTCTTTGGACCTACCTGCAGCTG
CACACAGTGTGTGCTTCCACAGGCCCTGGGTTCTCAGGAGAAAGAAGAGCGGGGTTTCTGCCCT
CCTGCTGATCACATCAGCCTCACACACTTGCTCTGGGACTGTGTAAATGGAATGACTATCAACA
CCTCTGATTGATAAAACCCGTCTGTGTGTAGATCTTTTCTGTCGTGAAGCCGTCAGGTCATTGC
TGTGGAGTCTGCTGGTGAAAGATCTTAGTGAAAACCTGAGCACATGGATGGCAGTAAACTGTCA
CAGGTGGTGACTTTAAAAACATTCAGTTCTAGGAAACTTAAGGAACAGAATTGGCTCAGTACAG
ACACCCCAAAACATTGAGAACATTCCAAGAAAGTGCTTTTTCTGTGTATGACATTCCTGACGAG
AGGTCATCAGCTGAGTCGACAGGCAGGCAGGTCTGATACTCACTGACCTCACTGCTAAGGATGC
GTGGATGGATGCATGCATGCATGGGTGGATGGATGCGTGGATGGATGGATGGATGGATGCATGC
ATGGATGCGTGGATGGATGCGTGGATGCGTGGATGGATGCATGGATGCGTGGATGGATGCGTGG
ATGGATGGATGCATGGATGGATGCGTGGATGCATGGATGTGTGGATGGATGCGTGGATGGATGC
ATGGATGGATGGAGTATATAAAGTTTATTTTCTGTTCCTTCCCTTAGGCTGGGGAGCTTTGTTC
CTCTGCTGCTGCTGTTTGCAGTTTAAGGTTGTGGAGTACTGAACCTGTGAGCTCCTTGTCTCAG
GAGAAGTAAGCCCACCGTCAGGATTAGGCCAGTGAGGCTGCCGGCATGGAAGCGGCCTCTGGAG
CTGTTGTCTCTTGTGGTCTTCCTTGGGAGACCTGTTGAGCGGCTGTTGGCCTGCCAGTTGCCAT
TCTGGGGGTAGCGGCTTCTGAGTGTTTTGCAGAGGCAGTGTTTTCAGCAGGCGGGGAGGTCCCC
AGTTCTGGATTGGTTGTCGAGTGTCCTGCCTTCCCTCAGCCGTACATCTGGTGTCTTACTGTAT
CT

hide sequence

RefSeq Acc Id:

XM_008766975 ⟹ XP_008765197

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	44,501,466 - 44,534,564 (-)	NCBI
mRatBN7.2	9	37,005,569 - 37,038,596 (-)	NCBI
Rnor_6.0	9	41,307,495 - 41,337,534 (-)	NCBI

Sequence:

show sequence

TCTGGCGCGCGGCGGGCGGAAGTGAGGTCGTGGGCTGCGGTGTCTGCGCAGCGTCGGCGGTAGC
GGGGGCCGCGGCGAGGCGGGCGGGAGGCAGCGCGGGCCTAGCGGTCAGCCGCAACCGAGCGTCG
TCTGGGCACTGCCCGTCGCCGAGCCACACGCCGTGCCGGCTCGGGCCGGCGCGCGCCGGTCCCG
GAGGCGCAGGCTACCTACTTGAAGTCATGAATCCTGTTTATAGCCCTGGGTCTTCTGGGGTTCC
CTATGCAAATGCCAAAGGAATTGGATATCCAGCTGGTTTCCCTGTGGGCTATGCAGCAGCTCCT
GCCTATTCTCCTAACATGTACCCTGGAGCGAACCCTACCTTCCAAACAGTGCTGGAGATTGAAC
CCAGGGTCTTGCACATGTTAGGTTACACTCCTGGCACACCTTACAAAGTGTCCTGTTCCCCAAC
CAGTGGGGCTGTGCCGCCATACTCCTCCTCCCCCAATCCTTACCAGACGGCTGTGTACCCAGTG
AGAAGTGCCTATCCCCAGCAGAGCCCATACGCCCAGCAAGGCACGTACTACACACAACCTCTGT
ATGCAGCACCTCCTCACGTCATTCACCACACCACAGTGGTGCAGCCCAATGGCATGCCAGCGAC
CGTCTACCCTGCTCCCATCCCTCCTCCTAGAGGCAGCGGGGTCACCATGGGCATGGTTGCTGGG
ACCACAATGGCCATGTCAGCAGGTACCCTGCTGACTGCTCATTCTCCAACTCCTGTAGCCCCTC
ACCCAGTCACTGTCCCCACATACCGAGCCCCAGGAACACCCACCTACAGCTATGTGCCCCCGCA
GTGGTGATCACCCTGCAAATTAATATGTGAGGATGGAGCTGTGCAGTCACTTCATTGAGTCCCA
CAGCTGGTGCTGCAGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTAATGCTCTCGACACTTAG
CTAAACATGACTGCGTCCCAGCCCAGCAGGTCCCAGCTCGCTAGTCTCCAGCTAACTCTGTGGG
TTGGTTTTAAAGCAAATCCTGTTTGTGGACTGCCTGGCAAATTTTTTAGCTAACTGTAATGATA
AAAAAGGGAGTATTATTCTATTCTGAATCATATCTAGTTGAATGCATGTTTATAAAAACAAACA
AAAAAGCTTGCTCAATCTACCTGCAGTGACTGATGCAAAACCCAAAGGACGGGACCGTGTTCTA
CAGCCTGTGTCACTCACGCACCTCTGTCATGTATGCTGAGTCTCAGTTACACTCGTGCAAGGGA
TGTCCTCACTGAAGCGTCGGGAGTGCTGGAGGGGACTCTTAGGGTGCTGGGTTTGCCAGTTATG
GACATAGACTTAGAGTTTTCAGCAGCCTGGTTTTTTTGGCACTGACTGACTGATCCTGGAGGGA
GCCGCAGGGACTGGGAGAGAATGTGAGCCTGCAGCAGCTCCAGACAGCAGCAGCAGCAGGGATA
GTAGGGTCCCTGCTTCACTTCAGCTGGAGTGTGCTCTGGGAAGCAGGGGTCTACCTGAAGCTTA
GCAGGAAGTCTAGGAGCGTGGTGAGCAGTCCAGCTGGGGTGAAGCGAGGTCTGTGTGTCAGTAG
AGCAGTGTCTGCCATCTGAGTTCCCACTGTCTGTCTTACAGGATAATGTCTTTTGTATCTGTTG
GGACTGTTGGAAAAGTCCATTGTAGAAGTAAACTGTCTTCCTAGGAGGGAAGAAGTCAAAGAGA
AGAGGCAGCCGCACTGGAACGGTGGTGTCTTTTGCTTTATTTCGCTTAGGGAACCATTCCTAAT
GTCCCCTGAGAATAATGAGTCAGCTGAAAATACAGGCGCTGTGTACTCTCCCATAAAGACTGAA
GCTGGGTGCTGTGGAGCGCGTTGTACATGGAAGACTGGTTACAAGGGAATAAGTGTATTTTTAA
GTTAGTTCCTCATGTTTCTTGTAGAGAAGCAGGGCTGTGATTATGTCTAAAAATGTAGAAATAA
TGTAGCTTGTCTTGGGGTTATTCACCTGAGGATGACCTGTCCTCTGTGATTAGTAGGTGAGACC
TGGAAAGCCTGCATAAGTGGCTTTGCCACTCTTCTGTAGCTGAAGGCACCCAGTACCAAGCACA
TGTGGAAAGTGGAAAGGCCGGGCAGTTCTGGAACGCACTTGCCTGAAAGGCTCTGTGGTGGGAA
AGATT

hide sequence

RefSeq Acc Id:

XM_008766978 ⟹ XP_008765200

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	44,501,466 - 44,534,566 (-)	NCBI
mRatBN7.2	9	37,005,569 - 37,038,596 (-)	NCBI
Rnor_6.0	9	41,307,495 - 41,337,536 (-)	NCBI

Sequence:

show sequence

CGTCTGGCGCGCGGCGGGCGGAAGTGAGGTCGTGGGCTGCGGTGTCTGCGCAGCGTCGGCGGTA
GCGGGGGCCGCGGCGAGGCGGGCGGGAGGCAGCGCGGGCCTAGCGGTCAGCCGCAACCGAGCGT
CGTCTGGGCACTGCCCGTCGCCGAGCCACACGCCGTGCCGGCTCGGGCCGGCGCGCGCCGGTCC
CGGAGGCGCAGGCTACCTACTTGAAGTCATGAATCCTGTTTATAGCCCTGGGTCTTCTGGGGTT
CCCTATGCAAATGCCAAAGGAATTGGATATCCAGCTGGTTTCCCTGTGGGCTATGCAGCAGCTC
CTGCCTATTCTCCTAACATGTACCCTGGAGCGAACCCTACCTTCCAAACAGTGCTGGAGATTGA
ACCCAGGGTCTTGCACATGTTAGGTTACACTCCTGGCACACCTTACAAAGTGTCCTGTTCCCCA
ACCAGTGGGGCTGTGCCGCCATACTCCTCCTCCCCCAATCCTTACCAGACGGCTGTGTACCCAG
TGAGAAGTGCCTATCCCCAGCAGAGCCCATACGCCCAGTTGTCTCTGTTTTCCCCACAGCAAGG
CACGTACTACACACAACCTCTGTATGCAGCACCTCCTCACGTCATTCACCACACCACAGTGGTG
CAGCCCAATGGCATGCCAGCGACCGTCTACCCTGCTCCCATCCCTCCTCCTAGAGGCAGCGGGG
TCACCATGGGCATGGTTGCTGGGACCACAATGGCCATGTCAGCAGGTACCCTGCTGACTGCTCA
TTCTCCAACTCCTGTAGCCCCTCACCCAGTCACTGTCCCCACATACCGAGCCCCAGGAACACCC
ACCTACAGCTATGTGCCCCCGCAGTGGTGATCACCCTGCAAATTAATATGTGAGGATGGAGCTG
TGCAGTCACTTCATTGAGTCCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAACCAGGACTTTC
TTCTTAATGCTCTCGACACTTAGCTAAACATGACTGCGTCCCAGCCCAGCAGGTCCCAGCTCGC
TAGTCTCCAGCTAACTCTGTGGGTTGGTTTTAAAGCAAATCCTGTTTGTGGACTGCCTGGCAAA
TTTTTTAGCTAACTGTAATGATAAAAAAGGGAGTATTATTCTATTCTGAATCATATCTAGTTGA
ATGCATGTTTATAAAAACAAACAAAAAAGCTTGCTCAATCTACCTGCAGTGACTGATGCAAAAC
CCAAAGGACGGGACCGTGTTCTACAGCCTGTGTCACTCACGCACCTCTGTCATGTATGCTGAGT
CTCAGTTACACTCGTGCAAGGGATGTCCTCACTGAAGCGTCGGGAGTGCTGGAGGGGACTCTTA
GGGTGCTGGGTTTGCCAGTTATGGACATAGACTTAGAGTTTTCAGCAGCCTGGTTTTTTTGGCA
CTGACTGACTGATCCTGGAGGGAGCCGCAGGGACTGGGAGAGAATGTGAGCCTGCAGCAGCTCC
AGACAGCAGCAGCAGCAGGGATAGTAGGGTCCCTGCTTCACTTCAGCTGGAGTGTGCTCTGGGA
AGCAGGGGTCTACCTGAAGCTTAGCAGGAAGTCTAGGAGCGTGGTGAGCAGTCCAGCTGGGGTG
AAGCGAGGTCTGTGTGTCAGTAGAGCAGTGTCTGCCATCTGAGTTCCCACTGTCTGTCTTACAG
GATAATGTCTTTTGTATCTGTTGGGACTGTTGGAAAAGTCCATTGTAGAAGTAAACTGTCTTCC
TAGGAGGGAAGAAGTCAAAGAGAAGAGGCAGCCGCACTGGAACGGTGGTGTCTTTTGCTTTATT
TCGCTTAGGGAACCATTCCTAATGTCCCCTGAGAATAATGAGTCAGCTGAAAATACAGGCGCTG
TGTACTCTCCCATAAAGACTGAAGCTGGGTGCTGTGGAGCGCGTTGTACATGGAAGACTGGTTA
CAAGGGAATAAGTGTATTTTTAAGTTAGTTCCTCATGTTTCTTGTAGAGAAGCAGGGCTGTGAT
TATGTCTAAAAATGTAGAAATAATGTAGCTTGTCTTGGGGTTATTCACCTGAGGATGACCTGTC
CTCTGTGATTAGTAGGTGAGACCTGGAAAGCCTGCATAAGTGGCTTTGCCACTCTTCTGTAGCT
GAAGGCACCCAGTACCAAGCACATGTGGAAAGTGGAAAGGCCGGGCAGTTCTGGAACGCACTTG
CCTGAAAGGCTCTGTGGTGGGAAAGATT

hide sequence

RefSeq Acc Id:

XM_017596648 ⟹ XP_017452137

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	44,501,466 - 44,534,571 (-)	NCBI
mRatBN7.2	9	37,005,569 - 37,038,596 (-)	NCBI
Rnor_6.0	9	41,307,495 - 41,337,535 (-)	NCBI

Sequence:

show sequence

GTCTGGCGCGCGGCGGGCGGAAGTGAGGTCGTGGGCTGCGGTGTCTGCGCAGCGTCGGCGGTAG
CGGGGGCCGCGGCGAGGCGGGCGGGAGGCAGCGCGGGCCTAGCGGTCAGCCGCAACCGAGCGTC
GTCTGGGCACTGCCCGTCGCCGAGCCACACGCCGTGCCGGCTCGGGCCGGCGCGCGCCGGTCCC
GGAGGCGCAGGCTACCTACTTGAAGTCATGAATCCTGTTTATAGCCCTGGGTCTTCTGGGGTTC
CCTATGCAAATGCCAAAGGAATTGGATATCCAGCTGGTTTCCCTGTGGGCTATGCAGCAGCTCC
TGCCTATTCTCCTAACATGTACCCTGGAGCGAACCCTACCTTCCAAACAGGTTACACTCCTGGC
ACACCTTACAAAGTGTCCTGTTCCCCAACCAGTGGGGCTGTGCCGCCATACTCCTCCTCCCCCA
ATCCTTACCAGACGGCTGTGTACCCAGTGAGAAGTGCCTATCCCCAGCAGAGCCCATACGCCCA
GTTGTCTCTGTTTTCCCCACAGCAAGGCACGTACTACACACAACCTCTGTATGCAGCACCTCCT
CACGTCATTCACCACACCACAGTGGTGCAGCCCAATGGCATGCCAGCGACCGTCTACCCTGCTC
CCATCCCTCCTCCTAGAGGCAGCGGGGTCACCATGGGCATGGTTGCTGGGACCACAATGGCCAT
GTCAGCAGGTACCCTGCTGACTGCTCATTCTCCAACTCCTGTAGCCCCTCACCCAGTCACTGTC
CCCACATACCGAGCCCCAGGAACACCCACCTACAGCTATGTGCCCCCGCAGTGGTGATCACCCT
GCAAATTAATATGTGAGGATGGAGCTGTGCAGTCACTTCATTGAGTCCCACAGCTGGTGCTGCA
GGCCTTGTGCCTCCAACCAGGACTTTCTTCTTAATGCTCTCGACACTTAGCTAAACATGACTGC
GTCCCAGCCCAGCAGGTCCCAGCTCGCTAGTCTCCAGCTAACTCTGTGGGTTGGTTTTAAAGCA
AATCCTGTTTGTGGACTGCCTGGCAAATTTTTTAGCTAACTGTAATGATAAAAAAGGGAGTATT
ATTCTATTCTGAATCATATCTAGTTGAATGCATGTTTATAAAAACAAACAAAAAAGCTTGCTCA
ATCTACCTGCAGTGACTGATGCAAAACCCAAAGGACGGGACCGTGTTCTACAGCCTGTGTCACT
CACGCACCTCTGTCATGTATGCTGAGTCTCAGTTACACTCGTGCAAGGGATGTCCTCACTGAAG
CGTCGGGAGTGCTGGAGGGGACTCTTAGGGTGCTGGGTTTGCCAGTTATGGACATAGACTTAGA
GTTTTCAGCAGCCTGGTTTTTTTGGCACTGACTGACTGATCCTGGAGGGAGCCGCAGGGACTGG
GAGAGAATGTGAGCCTGCAGCAGCTCCAGACAGCAGCAGCAGCAGGGATAGTAGGGTCCCTGCT
TCACTTCAGCTGGAGTGTGCTCTGGGAAGCAGGGGTCTACCTGAAGCTTAGCAGGAAGTCTAGG
AGCGTGGTGAGCAGTCCAGCTGGGGTGAAGCGAGGTCTGTGTGTCAGTAGAGCAGTGTCTGCCA
TCTGAGTTCCCACTGTCTGTCTTACAGGATAATGTCTTTTGTATCTGTTGGGACTGTTGGAAAA
GTCCATTGTAGAAGTAAACTGTCTTCCTAGGAGGGAAGAAGTCAAAGAGAAGAGGCAGCCGCAC
TGGAACGGTGGTGTCTTTTGCTTTATTTCGCTTAGGGAACCATTCCTAATGTCCCCTGAGAATA
ATGAGTCAGCTGAAAATACAGGCGCTGTGTACTCTCCCATAAAGACTGAAGCTGGGTGCTGTGG
AGCGCGTTGTACATGGAAGACTGGTTACAAGGGAATAAGTGTATTTTTAAGTTAGTTCCTCATG
TTTCTTGTAGAGAAGCAGGGCTGTGATTATGTCTAAAAATGTAGAAATAATGTAGCTTGTCTTG
GGGTTATTCACCTGAGGATGACCTGTCCTCTGTGATTAGTAGGTGAGACCTGGAAAGCCTGCAT
AAGTGGCTTTGCCACTCTTCTGTAGCTGAAGGCACCCAGTACCAAGCACATGTGGAAAGTGGAA
AGGCCGGGCAGTTCTGGAACGCACTTGCCTGAAAGGCTCTGTGGTGGGAAAGATT

hide sequence

RefSeq Acc Id:

XM_017596649 ⟹ XP_017452138

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	44,501,466 - 44,534,565 (-)	NCBI
mRatBN7.2	9	37,005,569 - 37,038,596 (-)	NCBI
Rnor_6.0	9	41,307,495 - 41,337,536 (-)	NCBI

Sequence:

show sequence

CGTCTGGCGCGCGGCGGGCGGAAGTGAGGTCGTGGGCTGCGGTGTCTGCGCAGCGTCGGCGGTA
GCGGGGGCCGCGGCGAGGCGGGCGGGAGGCAGCGCGGGCCTAGCGGTCAGCCGCAACCGAGCGT
CGTCTGGGCACTGCCCGTCGCCGAGCCACACGCCGTGCCGGCTCGGGCCGGCGCGCGCCGGTCC
CGGAGGCGCAGGCTACCTACTTGAAGTCATGAATCCTGTTTATAGCCCTGGGTCTTCTGGGGTT
CCCTATGCAAATGCCAAAGGAATTGGATATCCAGGTTACACTCCTGGCACACCTTACAAAGTGT
CCTGTTCCCCAACCAGTGGGGCTGTGCCGCCATACTCCTCCTCCCCCAATCCTTACCAGACGGC
TGTGTACCCAGTGAGAAGTGCCTATCCCCAGCAGAGCCCATACGCCCAGTTGTCTCTGTTTTCC
CCACAGCAAGGCACGTACTACACACAACCTCTGTATGCAGCACCTCCTCACGTCATTCACCACA
CCACAGTGGTGCAGCCCAATGGCATGCCAGCGACCGTCTACCCTGCTCCCATCCCTCCTCCTAG
AGGCAGCGGGGTCACCATGGGCATGGTTGCTGGGACCACAATGGCCATGTCAGCAGGTACCCTG
CTGACTGCTCATTCTCCAACTCCTGTAGCCCCTCACCCAGTCACTGTCCCCACATACCGAGCCC
CAGGAACACCCACCTACAGCTATGTGCCCCCGCAGTGGTGATCACCCTGCAAATTAATATGTGA
GGATGGAGCTGTGCAGTCACTTCATTGAGTCCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAA
CCAGGACTTTCTTCTTAATGCTCTCGACACTTAGCTAAACATGACTGCGTCCCAGCCCAGCAGG
TCCCAGCTCGCTAGTCTCCAGCTAACTCTGTGGGTTGGTTTTAAAGCAAATCCTGTTTGTGGAC
TGCCTGGCAAATTTTTTAGCTAACTGTAATGATAAAAAAGGGAGTATTATTCTATTCTGAATCA
TATCTAGTTGAATGCATGTTTATAAAAACAAACAAAAAAGCTTGCTCAATCTACCTGCAGTGAC
TGATGCAAAACCCAAAGGACGGGACCGTGTTCTACAGCCTGTGTCACTCACGCACCTCTGTCAT
GTATGCTGAGTCTCAGTTACACTCGTGCAAGGGATGTCCTCACTGAAGCGTCGGGAGTGCTGGA
GGGGACTCTTAGGGTGCTGGGTTTGCCAGTTATGGACATAGACTTAGAGTTTTCAGCAGCCTGG
TTTTTTTGGCACTGACTGACTGATCCTGGAGGGAGCCGCAGGGACTGGGAGAGAATGTGAGCCT
GCAGCAGCTCCAGACAGCAGCAGCAGCAGGGATAGTAGGGTCCCTGCTTCACTTCAGCTGGAGT
GTGCTCTGGGAAGCAGGGGTCTACCTGAAGCTTAGCAGGAAGTCTAGGAGCGTGGTGAGCAGTC
CAGCTGGGGTGAAGCGAGGTCTGTGTGTCAGTAGAGCAGTGTCTGCCATCTGAGTTCCCACTGT
CTGTCTTACAGGATAATGTCTTTTGTATCTGTTGGGACTGTTGGAAAAGTCCATTGTAGAAGTA
AACTGTCTTCCTAGGAGGGAAGAAGTCAAAGAGAAGAGGCAGCCGCACTGGAACGGTGGTGTCT
TTTGCTTTATTTCGCTTAGGGAACCATTCCTAATGTCCCCTGAGAATAATGAGTCAGCTGAAAA
TACAGGCGCTGTGTACTCTCCCATAAAGACTGAAGCTGGGTGCTGTGGAGCGCGTTGTACATGG
AAGACTGGTTACAAGGGAATAAGTGTATTTTTAAGTTAGTTCCTCATGTTTCTTGTAGAGAAGC
AGGGCTGTGATTATGTCTAAAAATGTAGAAATAATGTAGCTTGTCTTGGGGTTATTCACCTGAG
GATGACCTGTCCTCTGTGATTAGTAGGTGAGACCTGGAAAGCCTGCATAAGTGGCTTTGCCACT
CTTCTGTAGCTGAAGGCACCCAGTACCAAGCACATGTGGAAAGTGGAAAGGCCGGGCAGTTCTG
GAACGCACTTGCCTGAAAGGCTCTGTGGTGGGAAAGATT

hide sequence

RefSeq Acc Id:

XM_063267764 ⟹ XP_063123834

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	44,501,466 - 44,534,561 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001258063	(Get FASTA)	NCBI Sequence Viewer
	XP_008765197	(Get FASTA)	NCBI Sequence Viewer
	XP_008765200	(Get FASTA)	NCBI Sequence Viewer
	XP_017452137	(Get FASTA)	NCBI Sequence Viewer
	XP_017452138	(Get FASTA)	NCBI Sequence Viewer
	XP_063123834	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	D4AEP3	(Get FASTA)	NCBI Sequence Viewer
	EDL99300	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000033168
	ENSRNOP00000112438

RefSeq Acc Id:	NP_001258063 ⟸ NM_001271134
- UniProtKB:	D4AEP3 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MNPVYSPGSSGVPYANAKGIGYPAGFPVGYAAAPAYSPNMYPGANPTFQTGYTPGTPYKVSCSP TSGAVPPYSSSPNPYQTAVYPVRSAYPQQSPYAQQGTYYTQPLYAAPPHVIHHTTVVQPNGMPA TVYPAPIPPPRGSGVTMGMVAGTTMAMSAGTLLTAHSPTPVAPHPVTVPTYRAPGTPTYSYVPP QW hide sequence

RefSeq Acc Id:	XP_008765200 ⟸ XM_008766978
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QHF9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNPVYSPGSSGVPYANAKGIGYPAGFPVGYAAAPAYSPNMYPGANPTFQTVLEIEPRVLHMLGY TPGTPYKVSCSPTSGAVPPYSSSPNPYQTAVYPVRSAYPQQSPYAQLSLFSPQQGTYYTQPLYA APPHVIHHTTVVQPNGMPATVYPAPIPPPRGSGVTMGMVAGTTMAMSAGTLLTAHSPTPVAPHP VTVPTYRAPGTPTYSYVPPQW hide sequence

RefSeq Acc Id:	XP_008765197 ⟸ XM_008766975
- Peptide Label:	isoform X2
- UniProtKB:	A0A8L2QHF9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNPVYSPGSSGVPYANAKGIGYPAGFPVGYAAAPAYSPNMYPGANPTFQTVLEIEPRVLHMLGY TPGTPYKVSCSPTSGAVPPYSSSPNPYQTAVYPVRSAYPQQSPYAQQGTYYTQPLYAAPPHVIH HTTVVQPNGMPATVYPAPIPPPRGSGVTMGMVAGTTMAMSAGTLLTAHSPTPVAPHPVTVPTYR APGTPTYSYVPPQW hide sequence

RefSeq Acc Id:	XP_017452138 ⟸ XM_017596649
- Peptide Label:	isoform X4
- Sequence:	show sequence MNPVYSPGSSGVPYANAKGIGYPGYTPGTPYKVSCSPTSGAVPPYSSSPNPYQTAVYPVRSAYP QQSPYAQLSLFSPQQGTYYTQPLYAAPPHVIHHTTVVQPNGMPATVYPAPIPPPRGSGVTMGMV AGTTMAMSAGTLLTAHSPTPVAPHPVTVPTYRAPGTPTYSYVPPQW hide sequence

RefSeq Acc Id:	XP_017452137 ⟸ XM_017596648
- Peptide Label:	isoform X3
- UniProtKB:	A0A8L2QHF9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNPVYSPGSSGVPYANAKGIGYPAGFPVGYAAAPAYSPNMYPGANPTFQTGYTPGTPYKVSCSP TSGAVPPYSSSPNPYQTAVYPVRSAYPQQSPYAQLSLFSPQQGTYYTQPLYAAPPHVIHHTTVV QPNGMPATVYPAPIPPPRGSGVTMGMVAGTTMAMSAGTLLTAHSPTPVAPHPVTVPTYRAPGTP TYSYVPPQW hide sequence

Ensembl Acc Id:

ENSRNOP00000033168 ⟸ ENSRNOT00000039480

RefSeq Acc Id:	XP_063123834 ⟸ XM_063267764
- Peptide Label:	isoform X5

Ensembl Acc Id:

ENSRNOP00000112438 ⟸ ENSRNOT00000127370

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4AEP3-F1-model_v2	AlphaFold	D4AEP3	1-194	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696596

Promoter ID:

EPDNEW_R7121

Type:

multiple initiation site

Name:

Fam168b_1

Description:

family with sequence similarity 168, member B

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	9	41,337,511 - 41,337,571	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1583985	AgrOrtholog
BioCyc Gene	G2FUF-27848	BioCyc
Ensembl Genes	ENSRNOG00000023467	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000039480	ENTREZGENE
	ENSRNOT00000127370	ENTREZGENE
InterPro	FAM168A/MANI	UniProtKB/Swiss-Prot
KEGG Report	rno:690188	UniProtKB/Swiss-Prot
NCBI Gene	690188	ENTREZGENE
PANTHER	PTHR31844	UniProtKB/Swiss-Prot
Pfam	TCRP1	UniProtKB/Swiss-Prot
PhenoGen	Fam168b	PhenoGen
RatGTEx	ENSRNOG00000023467	RatGTEx
UniProt	A0A8L2QHF9	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0M0A6_RAT	UniProtKB/TrEMBL
	D4AEP3	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-10-23	Fam168b	family with sequence similarity 168, member B	LOC690188	similar to Protein KIAA0280	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-01-09	LOC690188	similar to Protein KIAA0280	LOC679302	similar to Protein KIAA0280	Data merged from RGD:1589567	1643240	APPROVED
2006-11-19	LOC690188	similar to Protein KIAA0280			Symbol and Name status set to provisional	70820	PROVISIONAL
2006-11-19	LOC679302	similar to Protein KIAA0280			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar