Dhrs2 (dehydrogenase/reductase 2) - Rat Genome Database

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Gene: Dhrs2 (dehydrogenase/reductase 2) Rattus norvegicus
Analyze
Symbol: Dhrs2
Name: dehydrogenase/reductase 2
RGD ID: 1583909
Description: Predicted to enable carbonyl reductase (NADPH) activity. Predicted to be involved in several processes, including cellular response to oxidative stress; electron transport chain; and myeloid dendritic cell differentiation. Predicted to be located in mitochondrion; nuclear envelope; and nucleoplasm. Orthologous to human DHRS2 (dehydrogenase/reductase 2); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: dehydrogenase/reductase (SDR family) member 2; dehydrogenase/reductase member 2; dehydrogenase/reductase SDR family member 2, mitochondrial; LOC691464; similar to dehydrogenase/reductase member 2
RGD Orthologs
Human
Mouse
Bonobo
Dog
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81532,658,855 - 32,673,591 (+)NCBIGRCr8
mRatBN7.21528,688,881 - 28,703,646 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1528,688,940 - 28,703,644 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01533,876,701 - 33,891,559 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1533,885,106 - 33,891,539 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01537,760,918 - 37,775,697 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41533,286,599 - 33,337,467 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1528,265,474 - 28,280,251 (+)NCBICelera
Cytogenetic Map15p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
1-fluoro-2,4-dinitrobenzene  (ISO)
1-phenyl-1,2-propanedione  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (ISO)
8-Br-cAMP  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
belinostat  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
butanal  (ISO)
cadmium dichloride  (EXP)
calcitriol  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cordycepin  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
CU-O LINKAGE  (ISO)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
decabromodiphenyl ether  (ISO)
diarsenic trioxide  (ISO)
dimethylarsinous acid  (ISO)
disulfiram  (ISO)
dorsomorphin  (ISO)
Enterolactone  (ISO)
entinostat  (ISO)
ethyl methanesulfonate  (ISO)
formaldehyde  (ISO)
FR900359  (ISO)
genistein  (ISO)
hydrogen peroxide  (ISO)
lipopolysaccharide  (ISO)
MeIQx  (ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
mitoxantrone  (ISO)
N-nitrosodiethylamine  (ISO)
N-Nitrosopyrrolidine  (ISO)
NADP zwitterion  (ISO)
NADP(+)  (ISO)
O-methyleugenol  (ISO)
p-chloromercuribenzoic acid  (ISO)
paracetamol  (ISO)
pentanal  (ISO)
phenylmercury acetate  (ISO)
PhIP  (ISO)
propanal  (ISO)
pterostilbene  (ISO)
raloxifene  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
senecionine  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sotorasib  (ISO)
tanespimycin  (ISO)
temozolomide  (ISO)
testosterone  (EXP,ISO)
trametinib  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vincristine  (ISO)
zearalenone  (ISO)
zinc atom  (ISO)
zinc dichloride  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (ISO)
mitochondrion  (ISO)
nuclear envelope  (ISO)
nucleoplasm  (IEA,ISO)
nucleus  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1847869   PMID:11944995   PMID:11997086   PMID:16685466   PMID:19443906   PMID:23036705   PMID:23376485  


Genomics

Comparative Map Data
Dhrs2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81532,658,855 - 32,673,591 (+)NCBIGRCr8
mRatBN7.21528,688,881 - 28,703,646 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1528,688,940 - 28,703,644 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01533,876,701 - 33,891,559 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1533,885,106 - 33,891,539 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01537,760,918 - 37,775,697 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41533,286,599 - 33,337,467 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1528,265,474 - 28,280,251 (+)NCBICelera
Cytogenetic Map15p13NCBI
DHRS2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381423,630,115 - 23,645,639 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1423,630,115 - 23,645,639 (+)EnsemblGRCh38hg38GRCh38
GRCh371424,099,324 - 24,114,848 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361423,175,422 - 23,184,688 (+)NCBINCBI36Build 36hg18NCBI36
Build 341423,175,421 - 23,184,686NCBI
Celera143,968,304 - 3,977,579 (+)NCBICelera
Cytogenetic Map14q11.2NCBI
HuRef144,222,777 - 4,232,052 (+)NCBIHuRef
CHM1_11424,104,263 - 24,113,538 (+)NCBICHM1_1
T2T-CHM13v2.01417,830,743 - 17,846,267 (+)NCBIT2T-CHM13v2.0
Dhrs2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391455,459,464 - 55,478,897 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1455,459,464 - 55,478,892 (+)EnsemblGRCm39 Ensembl
GRCm381455,222,007 - 55,241,440 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1455,222,007 - 55,241,435 (+)EnsemblGRCm38mm10GRCm38
MGSCv371455,840,844 - 55,860,277 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361454,176,076 - 54,195,508 (+)NCBIMGSCv36mm8
Celera1453,027,537 - 53,046,941 (+)NCBICelera
Cytogenetic Map14C3NCBI
cM Map1428.12NCBI
LOC100976049
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21525,063,775 - 25,079,146 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11424,280,267 - 24,295,638 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0144,457,316 - 4,466,551 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11422,549,693 - 22,558,926 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1422,551,645 - 22,558,926 (+)Ensemblpanpan1.1panPan2
DHRS2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.183,820,269 - 3,847,217 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl83,836,476 - 3,845,916 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha83,732,014 - 3,769,128 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.083,920,628 - 3,957,549 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl83,946,351 - 3,957,633 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.183,611,820 - 3,648,643 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.083,673,263 - 3,710,098 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.083,935,372 - 3,972,471 (+)NCBIUU_Cfam_GSD_1.0
DHRS2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12924,015,535 - 24,022,897 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2924,016,071 - 24,022,500 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605922,391,461 - 22,400,491 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Dhrs2
66 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:23
Count of miRNA genes:22
Interacting mature miRNAs:23
Transcripts:ENSRNOT00000024483
Prediction methods:Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354657Despr13Despair related QTL 130.0022locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)15129912054Rat
8552920Pigfal8Plasma insulin-like growth factor 1 level QTL 83blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)15134723002Rat
8694361Abfw6Abdominal fat weight QTL 610.20.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)15134723002Rat
9589149Insul29Insulin level QTL 299.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)15134723002Rat
731170Pur3Proteinuria QTL 32.30.0005urine protein amount (VT:0005160)urine protein excretion rate (CMO:0000759)15141686771Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1530632945306329Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat
1582251Gluco24Glucose level QTL 243.20.0008blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)15553075650530756Rat
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)151059608955596089Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2293688Bss29Bone structure and strength QTL 295.310.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)151111114256111142Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151249614165205939Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151672552880672115Rat
1331729Rf42Renal function QTL 423.071kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)151736289773690657Rat
631550Bw7Body weight QTL 73.6body mass (VT:0001259)body weight (CMO:0000012)151985656634924750Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)151985656646187442Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152211793367117933Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)152280624098288169Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)152280624098288169Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)152280624098288169Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)152803066582262678Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)152803066582262678Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)152803066582262678Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 7
Low 11 7
Below cutoff 1 10 6 4 6 1 2 48 2 11 2 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000024483   ⟹   ENSRNOP00000024484
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1528,688,940 - 28,703,644 (+)Ensembl
Rnor_6.0 Ensembl1533,885,106 - 33,891,539 (+)Ensembl
RefSeq Acc Id: XM_001078405   ⟹   XP_001078405
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81532,658,855 - 32,673,591 (+)NCBI
mRatBN7.21528,688,881 - 28,703,646 (+)NCBI
Rnor_6.01533,876,701 - 33,891,559 (+)NCBI
Rnor_5.01537,760,918 - 37,775,697 (+)NCBI
RGSC_v3.41533,286,599 - 33,337,467 (+)RGD
Sequence:
RefSeq Acc Id: XM_039093835   ⟹   XP_038949763
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81532,668,174 - 32,673,591 (+)NCBI
mRatBN7.21528,698,218 - 28,703,646 (+)NCBI
Protein Sequences
Protein RefSeqs XP_001078405 (Get FASTA)   NCBI Sequence Viewer  
  XP_038949763 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM14222 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000024484
  ENSRNOP00000024484.4
Reference Protein Sequences
RefSeq Acc Id: XP_001078405   ⟸   XM_001078405
- Peptide Label: isoform X1
- UniProtKB: D3ZEZ3 (UniProtKB/TrEMBL),   A6KGZ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000024484   ⟸   ENSRNOT00000024483
RefSeq Acc Id: XP_038949763   ⟸   XM_039093835
- Peptide Label: isoform X2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZEZ3-F1-model_v2 AlphaFold D3ZEZ3 1-284 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1583909 AgrOrtholog
BioCyc Gene G2FUF-13736 BioCyc
Ensembl Genes ENSRNOG00000018177 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000024483.5 UniProtKB/TrEMBL
Gene3D-CATH NAD(P)-binding Rossmann-like Domain UniProtKB/TrEMBL
InterPro Glc/ribitol_DH UniProtKB/TrEMBL
  NAD(P)-bd_dom_sf UniProtKB/TrEMBL
  Sc_DH/Rdtase_CS UniProtKB/TrEMBL
KEGG Report rno:691464 UniProtKB/TrEMBL
NCBI Gene 691464 ENTREZGENE
PANTHER DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4 UniProtKB/TrEMBL
  DEHYDROGENASE/REDUCTASE MEMBER 2 UniProtKB/TrEMBL
Pfam adh_short_C2 UniProtKB/TrEMBL
PhenoGen Dhrs2 PhenoGen
PRINTS GDHRDH UniProtKB/TrEMBL
  SDRFAMILY UniProtKB/TrEMBL
PROSITE ADH_SHORT UniProtKB/TrEMBL
RatGTEx ENSRNOG00000018177 RatGTEx
Superfamily-SCOP SSF51735 UniProtKB/TrEMBL
UniProt A6KGZ3 ENTREZGENE, UniProtKB/TrEMBL
  D3ZEZ3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-06-01 Dhrs2  dehydrogenase/reductase 2  Dhrs2  dehydrogenase/reductase (SDR family) member 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-01-10 Dhrs2  dehydrogenase/reductase (SDR family) member 2  Dhrs2  dehydrogenase/reductase member 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-10-15 Dhrs2  dehydrogenase/reductase member 2  Dhrs2  dehydrogenase/reductase (SDR family) member 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-26 Dhrs2  dehydrogenase/reductase (SDR family) member 2  Dhrs2  dehydrogenase/reductase member 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-06 Dhrs2  dehydrogenase/reductase member 2  LOC691464  similar to dehydrogenase/reductase member 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-01-09 LOC691464  similar to dehydrogenase/reductase member 2  LOC679180  similar to dehydrogenase/reductase member 2  Data merged from RGD:1591818 1643240 APPROVED
2006-11-20 LOC679180  similar to dehydrogenase/reductase member 2      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC691464  similar to dehydrogenase/reductase member 2      Symbol and Name status set to provisional 70820 PROVISIONAL