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Gene: Dnmbp (dynamin binding protein) Rattus norvegicus

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Symbol:

Dnmbp

Name:

dynamin binding protein

RGD ID:

1583840

Description:

Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in cilium assembly and regulation of cell shape. Located in Golgi apparatus and presynapse. Is active in synaptic vesicle. Human ortholog(s) of this gene implicated in cataract 48. Orthologous to human DNMBP (dynamin binding protein); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; amphetamine; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC309362; scaffold protein Tuba; similar to Dynamin-binding protein (Scaffold protein Tuba); Tuba

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DNMBP (dynamin binding protein)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Dnmbp (dynamin binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dnmbp (dynamin binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DNMBP (dynamin binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DNMBP (dynamin binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dnmbp (dynamin binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	LOC100152738 (dynamin-binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DNMBP (dynamin binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dnmbp (dynamin binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Dnmbp (dynamin binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	DNMBP (dynamin binding protein)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Dnmbp (dynamin binding protein)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	dnmbp (dynamin binding protein)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	Y37A1B.17	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	Y37A1B.17	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	dnmbp	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	dnmbp	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	252,685,406 - 252,778,642 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	252,685,406 - 252,778,688 (-)	Ensembl				GRCr8
mRatBN7.2	1	242,736,189 - 242,829,431 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	242,736,189 - 242,802,604 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	250,885,129 - 250,979,514 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	257,582,130 - 257,676,440 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	250,235,271 - 250,329,661 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	263,625,503 - 263,718,784 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	263,625,501 - 263,718,745 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	271,070,712 - 271,163,976 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Celera	1	238,553,153 - 238,646,320 (-)	NCBI		Celera
Cytogenetic Map	1	q54	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

cataract 48 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-demecolcine (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-palmitoylglycerol (ISO)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

amphetamine (EXP)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

carbamazepine (ISO)

chlormequat chloride (EXP)

chloroacetaldehyde (ISO)

chlorpyrifos (ISO)

cocaine (EXP)

copper atom (ISO)

copper(0) (ISO)

crocidolite asbestos (ISO)

cyclosporin A (EXP)

DDE (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP)

dichloroacetic acid (ISO)

diethyl maleate (EXP)

dioxygen (ISO)

fenofibrate (EXP)

FR900359 (ISO)

gentamycin (EXP)

ibuprofen (EXP)

ifosfamide (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

metformin (EXP)

methapyrilene (EXP)

methotrexate (ISO)

paracetamol (EXP,ISO)

PD 0325901 (ISO)

pirinixic acid (ISO)

progesterone (ISO)

raloxifene (ISO)

rotenone (EXP)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

Soman (EXP)

sunitinib (ISO)

tamoxifen (ISO)

tert-butyl hydroperoxide (ISO)

testosterone (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

troglitazone (ISO)

urethane (ISO)

valproic acid (ISO)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cilium assembly (IBA,ISO)

intracellular signal transduction (IEA)

regulation of cell shape (IEA,ISO,ISS)

Cellular Component

anchoring junction (IEA)

cell-cell junction (IEA,ISO,ISS)

cytoplasm (IBA,IEA)

cytoskeleton (IEA)

cytosol (IEA,ISO)

Golgi apparatus (IDA)

Golgi stack (IEA)

presynapse (IDA)

synapse (IDA,IEA)

synaptic vesicle (IDA)

Molecular Function

guanyl-nucleotide exchange factor activity (IBA,IEA,ISO,ISS)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

clathrin-dependent synaptic vesicle endocytosis (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Dynamin binding protein gene expression and memory performance in aged rats.	Casoli T, etal., Neurobiol Aging. 2012 Mar;33(3):618.e15-9. doi: 10.1016/j.neurobiolaging.2010.11.012. Epub 2011 Jan 12.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Tuba stimulates intracellular N-WASP-dependent actin assembly.	Kovacs EM, etal., J Cell Sci. 2006 Jul 1;119(Pt 13):2715-26. doi: 10.1242/jcs.03005. Epub 2006 Jun 6.
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Comprehensive gene review and curation	RGD comprehensive gene curation
8.	Synaptic vesicle endocytosis.	Saheki Y and De Camilli P, Cold Spring Harb Perspect Biol. 2012 Sep 1;4(9):a005645. doi: 10.1101/cshperspect.a005645.
9.	Tuba, a novel protein containing bin/amphiphysin/Rvs and Dbl homology domains, links dynamin to regulation of the actin cytoskeleton.	Salazar MA, etal., J Biol Chem. 2003 Dec 5;278(49):49031-43. doi: 10.1074/jbc.M308104200. Epub 2003 Sep 22.

Additional References at PubMed

PMID:17015620	PMID:26895965

Genomics

Comparative Map Data

Dnmbp
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	252,685,406 - 252,778,642 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	252,685,406 - 252,778,688 (-)	Ensembl				GRCr8
mRatBN7.2	1	242,736,189 - 242,829,431 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	242,736,189 - 242,802,604 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	250,885,129 - 250,979,514 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	257,582,130 - 257,676,440 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	250,235,271 - 250,329,661 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	263,625,503 - 263,718,784 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	263,625,501 - 263,718,745 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	271,070,712 - 271,163,976 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Celera	1	238,553,153 - 238,646,320 (-)	NCBI		Celera
Cytogenetic Map	1	q54	NCBI

DNMBP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	99,875,571 - 100,009,947 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	99,875,577 - 100,009,947 (-)	Ensembl			hg38	GRCh38
GRCh37	10	101,635,328 - 101,769,704 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	101,625,324 - 101,759,666 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	10	101,626,897 - 101,721,871	NCBI
Celera	10	95,373,310 - 95,507,635 (-)	NCBI		Celera
Cytogenetic Map	10	q24.2	NCBI
HuRef	10	95,263,159 - 95,397,460 (-)	NCBI		HuRef
CHM1_1	10	101,918,170 - 102,052,972 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	100,759,305 - 100,893,694 (-)	NCBI		T2T-CHM13v2.0

Dnmbp
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	43,835,259 - 43,930,930 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	43,835,260 - 43,928,630 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	19	43,846,815 - 43,940,232 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	43,846,821 - 43,940,191 (-)	Ensembl			mm10	GRCm38
MGSCv37	19	43,922,457 - 43,986,882 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	19	43,901,278 - 43,973,731 (-)	NCBI		MGSCv36	mm8
Celera	19	44,631,197 - 44,695,446 (-)	NCBI		Celera
Cytogenetic Map	19	C3	NCBI
cM Map	19	36.67	NCBI

Dnmbp
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955507	5,801,182 - 5,876,972 (-)	Ensembl
ChiLan1.0	NW_004955507	5,801,350 - 5,876,972 (-)	NCBI	ChiLan1.0	ChiLan1.0

DNMBP
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	111,771,305 - 111,906,400 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	111,776,625 - 111,911,683 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	96,479,312 - 96,615,079 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	99,971,152 - 100,099,514 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	99,972,725 - 100,066,397 (-)	Ensembl			panPan2	panpan1.1

DNMBP
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	12,751,870 - 12,825,654 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	12,753,305 - 12,825,494 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	12,935,123 - 13,042,079 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	13,219,771 - 13,327,263 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	13,219,775 - 13,327,244 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	12,766,434 - 12,874,137 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	12,798,354 - 12,912,131 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	12,939,056 - 13,046,468 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Dnmbp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	34,173,434 - 34,240,699 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936636	211,459 - 279,819 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936636	212,572 - 279,815 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LOC100152738
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	111,044,177 - 111,167,323 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	14	111,044,174 - 111,167,299 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	120,489,421 - 120,614,960 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DNMBP
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	92,926,283 - 93,048,228 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	92,923,953 - 93,047,554 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666048	53,933,644 - 54,053,732 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dnmbp
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624737	11,715,311 - 11,821,882 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Dnmbp
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	43,378,870 - 43,472,696 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Dnmbp
728 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	170
Count of miRNA genes:	99
Interacting mature miRNAs:	104
Transcripts:	ENSRNOT00000074810, ENSRNOT00000075661
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578778	Pur4	Proteinuria QTL 4	3.3	0.003	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	1	160111531	262090437	Rat
1354646	Kidm18	Kidney mass QTL 18	5.7		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	160573753	266453731	Rat
1354652	Kidm20	Kidney mass QTL 20	4.3		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	186658830	266453731	Rat
2293674	Bss39	Bone structure and strength QTL 39	7.1	0.0001	femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	1	210980612	255980612	Rat
61327	Eae7	Experimental allergic encephalomyelitis QTL 7	5.6		body mass (VT:0001259)	change in body weight (CMO:0002045)	1	226175591	270518180	Rat
1578775	Iddm21	Insulin dependent diabetes mellitus QTL 21	4.13		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	245782829	270518180	Rat
1600395	Niddm69	Non-insulin dependent diabetes mellitus QTL 69	4.14	0.0002	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	205233991	267096252	Rat
1578763	Kidm29	Kidney mass QTL 29	3.3	0.0001	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	1	218829748	263829748	Rat
1354624	Cm35	Cardiac mass QTL35	5.7		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	186658830	266453731	Rat
1600396	Niddm68	Non-insulin dependent diabetes mellitus QTL 68	4.97	0.0003	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	205233991	267096252	Rat
631837	Niddm35	Non-insulin dependent diabetes mellitus QTL 35		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	1	248619887	269633915	Rat
1600397	Edcs4	Endometrial carcinoma susceptibility QTL 4	2.2		uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	1	176288899	270518180	Rat
631836	Stl31	Serum triglyceride level QTL 31	4.64	5e-06	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	1	247133834	270518180	Rat
1549837	Hcar15	Hepatocarcinoma resistance QTL 15		0.05	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	162548015	270518180	Rat
152025235	Bw194	Body weight QTL 194	4.86		body mass (VT:0001259)		1	132966869	252856240	Rat
1600388	Niddm67	Non-insulin dependent diabetes mellitus QTL 67	5.84	0.000004	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	205233991	267096252	Rat
2293694	Bss38	Bone structure and strength QTL 38	7.05	0.0001	femur strength trait (VT:0010010)	femur stiffness (CMO:0001674)	1	210980612	255980612	Rat
1598853	Memor3	Memory QTL 3	4.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	1	152919152	268496042	Rat
1578759	Uae30	Urinary albumin excretion QTL 30	3.3	0.003	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	160111531	262090437	Rat
1300108	Rf8	Renal function QTL 8	3.75		renal blood flow trait (VT:2000006)	absolute change in renal vascular resistance (CMO:0001900)	1	237995023	269633915	Rat
734767	Niddm57	Non-insulin dependent diabetes mellitus QTL 57			body mass (VT:0001259)	body weight (CMO:0000012)	1	233480549	270108840	Rat
1358898	Bp255	Blood pressure QTL 255	3.6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	200449456	256003563	Rat
631215	Stl8	Serum triglyceride level QTL 8	9.27	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	1	234540191	270518180	Rat
631843	Bw116	Body weight QTL 116	4.1	0.016	abdominal adipose amount (VT:1000220)	abdominal fat pad weight (CMO:0000088)	1	233480549	270108840	Rat
731175	Uae20	Urinary albumin excretion QTL 20	3.5	0.0018	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	207163993	269633915	Rat
2300175	Bmd40	Bone mineral density QTL 40	15.4	0.0001	femur mineral mass (VT:0010011)	bone mineral density (CMO:0001226)	1	210980612	255980612	Rat
1354661	Bw33	Body weight QTL 33	5.2		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
724538	Kidm1	Kidney mass QTL 1	3.2		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	223134011	262090599	Rat
2293655	Bss36	Bone structure and strength QTL 36	10.66	0.0001	femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	1	210980612	255980612	Rat
724531	Uae5	Urinary albumin excretion QTL 5	4		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	1	160111426	262090599	Rat
2314011	Gluco56	Glucose level QTL 56			blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	209203273	254203273	Rat
734769	Niddm58	Non-insulin dependent diabetes mellitus QTL 58			body mass (VT:0001259)	body weight (CMO:0000012)	1	225108840	270108840	Rat
724533	Rf51	Renal function QTL 51	5.3	0.0002	kidney plasma flow trait (VT:0005524)	renal plasma flow (CMO:0001914)	1	228180370	266453608	Rat
1354580	Scort1	Serum corticosterone level QTL 1	3.4		blood corticosterone amount (VT:0005345)	blood corticosterone level (CMO:0001172)	1	154961463	266453731	Rat
634313	Niddm43	Non-insulin dependent diabetes mellitus QTL 43			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	208479811	269633915	Rat
70211	Niddm24	Non-insulin dependent diabetes mellitus QTL 24	3.79		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	224633915	269633915	Rat
724552	Glom2	Glomerulus QTL 2	3.3	0.0001	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)	1	232312773	270518180	Rat
2316896	Gluco57	Glucose level QTL 57	7.2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	238398865	255849249	Rat
1358916	Kidm22	Kidney mass QTL 22	3.32		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	1	212738576	257738576	Rat
2312564	Glom18	Glomerulus QTL 18	2.4	0.003	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	1	194786607	262083703	Rat
2292218	Kidm35	Kidney mass QTL 35			kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	1	208798288	253798288	Rat
61400	Niddm1	Non-insulin dependent diabetes mellitus QTL 1	11		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	228180243	255849249	Rat
1354610	Bw34	Body weight QTL 34	4.1		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
2293700	Bmd27	Bone mineral density QTL 27	6.6	0.0001	femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	1	210980612	255980612	Rat
2293701	Bmd34	Bone mineral density QTL 34	8.3	0.0001	femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	1	210980612	255980612	Rat
7387289	Uae45	Urinary albumin excretion QTL 45	2.86	0.0021	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	233204160	270518180	Rat
1581544	Rf52	Renal function QTL 52		0.05	urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	1	241569529	269633915	Rat
1600363	Hc6	Hypercalciuria QTL 6	2.7		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	1	210980612	255980612	Rat
631536	Lnnr2	Liver neoplastic nodule remodeling QTL 2	2.9	0.0005	liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)	1	243953669	270518180	Rat
738032	Hcas5	Hepatocarcinoma susceptibility QTL 5	3.12		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	185857683	270518180	Rat
2302040	Pia35	Pristane induced arthritis QTL 35	3.8	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	1	226175591	270518180	Rat
631669	Iddm9	Insulin dependent diabetes mellitus QTL 9	2.8	0.039	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	233349180	270518180	Rat
7394701	Uae46	Urinary albumin excretion QTL 46	3.6	0.0056	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	210980612	255980612	Rat
1598821	Rf55	Renal function QTL 55	6.3		renal blood flow trait (VT:2000006)	ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)	1	228174566	270518180	Rat

Markers in Region

RH129496

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	242,736,252 - 242,736,409 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	263,625,567 - 263,625,723	NCBI	Rnor6.0
Rnor_5.0	1	271,070,776 - 271,070,932	UniSTS	Rnor5.0
Celera	1	238,553,217 - 238,553,373	UniSTS
RH 3.4 Map	1	1617.52	UniSTS
Cytogenetic Map	1	q51	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	90	59	6	354	190	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001376933	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001395001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006223762	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008760486	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008774849	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589724	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590382	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590383	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264624	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC096315	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ216506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000074810 ⟹ ENSRNOP00000064242

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	252,685,406 - 252,751,686 (-)	Ensembl
mRatBN7.2 Ensembl	1	242,736,189 - 242,802,604 (-)	Ensembl
Rnor_6.0 Ensembl	1	263,625,501 - 263,718,745 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096155 ⟹ ENSRNOP00000077401

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	252,685,406 - 252,778,688 (-)	Ensembl
mRatBN7.2 Ensembl	1	242,736,189 - 242,766,747 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096853 ⟹ ENSRNOP00000087128

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	252,685,406 - 252,726,462 (-)	Ensembl
mRatBN7.2 Ensembl	1	242,736,189 - 242,777,226 (-)	Ensembl

RefSeq Acc Id:

NM_001376933 ⟹ NP_001363862

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	252,685,406 - 252,715,964 (-)	NCBI
mRatBN7.2	1	242,736,189 - 242,766,747 (-)	NCBI

RefSeq Acc Id:

NM_001395001 ⟹ NP_001381930

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	252,685,406 - 252,778,642 (-)	NCBI
mRatBN7.2	1	242,736,189 - 242,829,431 (-)	NCBI

RefSeq Acc Id:

XM_008760486 ⟹ XP_008758708

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	252,685,406 - 252,751,888 (-)	NCBI
mRatBN7.2	1	242,736,189 - 242,802,694 (-)	NCBI
Rnor_6.0	1	263,625,503 - 263,692,458 (-)	NCBI

Sequence:

show sequence

AAATAAATAAATAAAACAAAAAAGGGTAGGAAAACTGACTGGGTGGGGTGGCTAAGAAGATAAT
TCGGAGGTTAAGAACACCGACTGCTCCTCCAGGATTAATTCCCAGCACCCGCATGGCAGTTCAT
AACCATCTAACTCCAGTCCCAAGAGATCTGACATCCTTTTTTGGTAGGTGCCCAGGCACACATG
TGACATACATACAGGCAAAACACCCATATGCGTAAGATAAAAATATATAAATCTTTTTTTAATG
AAGCTGATGGATGAGATCATCTGACCCGGAAGCAGGTCACTGTAACTGTCCAGGACTGTCGCTG
GGATTAAATACAGCGCAGTACTGTACAGGCTGAGCTTGCTTCCAGCAGCCCGAGTAAACCCGGT
TCACTCTGGATCTGTGGACGACGTCAGGAAGACTCAAGGTGTGTCTTGCTCTCGGGTGCTGGGA
TTGACAGGCATGTGCCGTCACACGTGACCCCGTGGGCTTATTTTAAAACCTGGTCAAAATTAGA
TTAACCAGGTTGAAATAAAGAAGGTCTGAAGTGTTTATACTCGAAGACAGTTTCTTCTCTGGTG
GCCAGGGACACAGATTTGAACTTGGAATTAGCTATGGACATGAGTTTTAGTAAGCTAATGTTTA
CTGAGAGGCTGTAACTGCCAGTAACTGAAGACAGTTAGGTGCCTGTCATGCCCTCAGCACCTTC
ACACAGCATCCTGGGTAAGGCTTTGGAGTCAGACAGATTTGGATTCCCATTCTGTGTCCGACTT
ACTGTGTGACTTGGAGTTATCACTTCTTCGAGCCTGTGTTCTCATCTGCCACATGGGAACCAAC
AGTGCACAGGCAGCACCAGGAAGCATGGAGCCTGGGTCCGTGGTGCGTGCCATCTTTGACTTCT
GCCCTAGCGTCTCGGAGGAGCTGCCACTCTTCGTGGGGGACGTAATTGAGGTGTTGACCGTGGT
GGATGAATTTTGGCTTTTAGGGAAGAAGGAAGATGTTACAGGACAGTTCCCCAGCAGTTTCGTG
GAGATCGTGACAATTCCCAGTCTGAAAGAGGGAGAGAGGCTGTTTGTTTGCACCTGCGATTTCA
TATCTCGAGAGCCGAATAGTCTTTCCCTCCATCGAGGAGACCTGGTGATTATTGATGGTACTCC
CACAGCAGGATGGCTGCAGGGCCGAAGCTCCCTGGGCGCCAGGGGTTTCTTTCCGTCTTCGTGC
ATCCATGAGCTCTGCCTCTCCTCTCAAAGCCGACAGTGGCATTCCCAGAACATGCTGCTGCAGG
TTCCAGAGTACTCCATGGGACAAGCACGGGCCCTCATGGGCCTCTCTGCCCAGTTGGATGAGGA
GTTAGACTTCAGGGAAGGAGACGTGATCACCATTATCGGGGTGCCTGAACCAGGCTGGTTTGAG
GGAGAGCTAGAGGGCCGAAGGGGCATTTTCCCAGAAGGTTTTGTAGAGCTTCTGGGGCCCCTGA
GGACTGCGGATGAGTCGGTAAACGCTGGAAGTGGAGATGACTCCACGCTCAATGATGAAGTGGA
TGTGTCTCCAGAAGAAGTGGAGAGTGAGGGTGACGAGGACGACCAGCAGGCGGGGACCTATGGG
ATTGCCCTCTACAGATTCCAAGCCCTGGAATCAAATGAGTTGGATTTTGAGGTAGGGGACAAAA
TTCGAATTCTGGGGACCTTGGAGGATGGCTGGCTGGAAGGGCGTCTGAAGGGCAAGACAGGCAT
CTTTCCCCATCGCTTTGTGAAGTTATGTCCTAGCAACAGATCAGAGGAAACCATGGCTCTGCCC
CAGGGAGACAGCTTCCCCAAGAACTCTGAAAGCTCAGCGGGCGAGATGGGGGACTCCGTGGTGG
AGGAAGCAAGACAGGATCCACAGGAGTGTGAAGAAGAAACACCTGACTCTGGTCTCCCAGAACA
AACCTCTGAGGAGCCCCTGGATCATGTGGCCCCCGAGTGTGTTGTAGATAAGATCTCTGGTCAG
GATGAAGATGCCTCAGGAAGCTCCCCAGATGTGGATCTTGAAGGGCCTCGTGCTGAAGACCCTT
CCACACCTGACCTCTCCCAGGAAGTCAATGGCATTTCTTCCCTGCCTCCACAGGTACCTCTTCA
ACCCGAAGAGGAGAAGAGCCAGCATTATTTAACAGCAGGAGGGAGCCGCCAATGCCCAGACACA
TTCTCCAAGCTTTTCCCTCTAGAAGCCAAGACCAGGAACTACTCCAGCCTGCCTCCAAGAAGAA
CATATACCCAGGGCTGGTCGCTTCAGAAGCCAGCGCCCCACCTCCACAGGGCCTCCTCCCTCAC
AGCGTCAAGAGTAAACAGACCTGGCCACTTTAGCCACACAGCCATGGCCAGCTGTGCTCAGAAG
CACCAAACATCTGCAGAAAATGCTGCCAGCCTCTGCTGTGCACCTGAGAGACCAAAGAGGAGGC
CTGGCCTACCAGACAAGGAACCCGCCACAGAAATAACCCCAGCGTCACAGGGGGACAACCTGGA
CTTAGATTCCAAGTTGACCCAACAGCTGATAGAGTTTGAGAAGAGTCTGTCAGGGCCCAGCACA
GAGCCAAAGAAAATTGTACGCCGCTTTTCAATCATGGACTTTTACTCAGAGAAGGATATCGTGA
GAGGCTCCTCAAACTCACTACCCTCACGGAATTTCCCTGAGAGGAGAAAGGCCCTGAGGCCACC
GCCGCCCAGACCTCATACCCCAACATCCACTTCTCCCCATTTGCTGGTTGACCAGAGCCCAAAA
CCTGGACCCCCCTTGGTTGTGAGGCCATCCCGCCCGGCTCCCCTGCCACCTCCTACCCAGCAGA
GGCTGAACACAGCCTCTCCCAAGCCCACCTCCTGTGCCCTTCCTGGCTGGGAGGCTCCAGAGAA
GGAGGGCTCTGAGTACACAGAGAAGAGCCCAGCCCAGCTTTTTCCGTGCCCATCTGTGCTGGCG
AGGATTCAGGATGTGGAACACGACTTGGACATGCACACCAGGGCTCAGGAAGAGCTGAACTTGC
TGTTAGAGGAAAAGCAAGATGAATCGTTGAGGGCGGAGACTCTCGAGACTCTCAAATCCTACGA
GAGCACCATTCAGAGTCTGAACCTGGAGCTCCAGCAGCTGAGAGAGATGACGCTCCTCTCCTCC
CAGTCTTCATCCCTGGCGGCCCCCTCTGGGTCTGTGTCCACCGAAAAGCCTGAGCAGAGGATGC
TGGAGAAGAGAGCCAAGGTGGTGGCTGAGCTTTTGCAGACGGAAAAAGACTACATCCGGGATCT
GGAGATGTGCGTCGAGAGGGTCATGGTGCCCCTGCAGCAGGCACAGGTACCAAACATTGATTTT
GAAGGACTTTTTGGAAACATGCAAACGGTGATTAAAGTCTCAAAGCAGTTGTTGGCAGCCTTGG
AAATCACCGATGCTGTAGGACCCGTGTTTCTGGATCACCGGGACGAACTTGAGGGGACGTACAG
ACTTTACTGCCAGAACCACGACGAAGCCATTTCACTGCTAGATATCTACGAGAAGGACGAGAGG
ATCCAGAAGCATCTCCAGGACTACTTGGCAGATCTCAAGAGCCTGTACCACGAATGGGGATGCA
CCAATTACATCAACCTGGGCTCTTTCCTCATCAAGCCCGTACAGAGAATAATGCGTTACCCGCT
GCTGCTAATGGAGCTGCTGAATTCCACCCCGGAATCCCACCCGGATAAAGCGCCTTTAACCAGC
GCAGTCCTGGCCATCAAGGAAATCAATGCTAACATTAATGAATATAAGCGTCGGAAGGATCTAG
TGCTTAAGTACCGCAAAGCGGATGAAGACAGCCTCATGGAGAAGATCTCCAAGCTCAACATCCA
CTCCATCATCAAGAAGTCCAGCCGGGTTAGCAGTCACCTGAAACACCTCACTGGCTTCGCTCCC
CAGCTAAAAGATGAAGCATTTGAAGAGACAGAAAAGAACTTCCGGATGCAGGAGAGATTGATTA
AATCTTTTATCCGAGACCTGTCCCTCTACCTCCAGCACATACGGGAATCTGCTTGTGTGAAGGT
GGTGGCAGCCATGAGCATATGGGATCTGTGCATGGAGAGGGGACATCATGACCTGGAACAGTTT
GAGAAGGTGCATCGATACATCAGCGACCAGCTCTTCACACGGTTTAAAGAGAGGACCGAGCGGC
TTGTCATCAATCCCTTAAACCAGCTGTTGAACATGTTCACGGGGCCCTACAAGCTGGTGCAGAA
GCGTTTCGACAAGCTCCTGGACTTCTACAACTGCACTGAGCGAGCGGAGAAGCTTAAGGACAAG
AAGACTCTGGAGGATCTCCAGTCAGCCCGAAACAACTACGAGGCCCTGAACTCCCAGCTGCTGG
ACGAGCTGCCCAAGTTCCAGCAGTACGCCCAGAGCCTCTTCACCAACTGCATCCACGGCTACGC
CGAAGCCCACTGTGACTTCGTGCAGAAGGCGCTGGAGCAGCTGCAGCCCCTGCTGTCGCTACTG
AAAGCCAGCGACCGAGAAGGCAACCTGATCGCCATCTTCCACGAGGAGCACAGCCGGGTCCTTC
AGCAGCTCCAGGTCTTCACTTTCTTCCCCGAGGCCCTCCCAGCCCCCAGGAAGCCCTTCGAGAG
GAAAACCACAGACCGCCAGTCATCACGGAAGGCCCTCCTGGGCATGCCAAGCTACATGCTGCAG
TCAGAAGAACTGCGGAGCTCCCTGCTGGCGAGGTACCCACCGGAAAAGCTCTTCCATGTCCAAC
GCAACTTCAACGCAGCTCAGGACTTGGATGTCTCCCTTTTGGAAGGTGATCTGGTGGGCGTGAT
CAAAAAGAAAGACCCCATGGGCAGCCAGAACCGCTGGCTCGTGGACAACGGAGTCACCAAAGGC
TTTGTCTACAGCTCCTTCCTGAAGCCTTACAACCCTCGATGCAGCCATTCGGATTCCTCTGTGG
TCAGCCACTCTTCCACAGAGTCCGAGCACAGCGGCTCCTCCCCCAGCTTCCATCGCCAGAACAG
CAGCAGTGCCTTGACCTTCAACTCCAACAGCATGACTGTGTCCTTCACCTCAGGGCTTCCCCAG
AAGCAGCCTCAGGACACATCTCCACTGAGGGAATGTGTCCCCGAAACTCTTGGTGTGTCCTCGA
ACACGGGGAACCCAGAAACTGGACCTTCCCCATGCCCTTCAGATCCAGGCTTCTCCTGCCAGCG
CAGGCCGGGCAACCCTGCAGATGGCACCCGAGAGATCAGCCAACCTGCTTCAACCTTGAGGGGC
TGCCAGCGACGCTCCCTGCATTCCGAAGTGCTCGGTTACCCTGTGCCAGGGCGCAGTGACCAAG
GCAGTGACTCCATAAAAGGAACCTCAAGAGCCTGTCAGACCGCAGGAGACAGAGACAGAGGGCT
CGGAAGCAGCGAGGCAGAGGGCAACCAGGTCTATTTTGCCATCTACACCTTCAAGGCACGAAAC
CCAAATGAGCTGACTGTGTTGGCCAATCAGAGACTCAGGATCCTTGAGTTTAAAGACGTCACAG
GCAATACAGAGTGGTGGTTGGCTGAAGTTAACGGAAAGAAGGGCTACGTCCCGTCCAACTATAT
CCGAAAAACTGAGTACACCTGAGCCAAGTTGCCTTGGGTCCCCACCTCGAGGCCGCTTTCAGTC
CACTGAGAAGTTCTGGTGGGCTCCAGGCACCTGCTGTCAAGCAGGGCTCCACCCCACTGCCTAT
CCATAACGCGGAGCGCACAATAAGCTTTGTTCTGATTGGGTTGTACACTTTGATGCTCGCTAGA
ATTTGACGTGGGTGGACCCCAAAGGTTTGCCAGTGACTCAGTGTCCACAGGAAGCAGGCCAAAT
GCTGGTGTCAGCTTTGGGAAATGAGACATTCCCAATCAGAAATGCAGTATTGTATGCCGGAAGC
TGTATGGCATCAGAGGATGCTGGCATTGGCTGCCTCGTACGCCTTGGTCAACTGAGTAGTCACG
GGGTGAGGAGGAGTGGGTTCCAAGACCTTCTCCATCTCGCCTCCATACACAGGAACAGTTATGT
CAGGATCACACCAAACCTGGTGTGTCAAGGTGTCTAAGACACCCCGGTGCCCGGCAGCCTTCTC
TCTCTGACACTTGCCCCTCACTCCTAGTTCTTAACACGATAGCCTTTCACTGCTTCCCCGTTGA
ATGTTTACAGTCTAACTTTTCTTCCACCCGTGAGTCTGGACCATGTGTCTGGAAGGTTCTCTTA
CCTTGTCGAACATGGTCATCTGCCTCTTCCCTGACACTCATCTTAATTTTATTTGATCTTGATG
GTGTCTCCTAACCTTTCTCCCTATACTTATTGACTGACAAGATTTCCCTAGTCTAGCGGGCTTG
GCACTCCGGCCAGCCACTGAAAGTATTCTGCTGGGTGGAAGCCAGACGCCTGCCCCACCCCCTT
CCACCGCAGCACTCTGCTGCGGTCTAGTCACCTCCACACGTGCTCAAGACAACCCACGTGGCTT
ATTTTGAAGTAGGTAGGACCGGTGGCCGAAGAAGCTTGCCTTAGAGTTTGGAAATAAGAATTTT
CTTTCTCACCACCAACTGCCATACTTCAAGGACAATATTTCAAAGTCAGACAGATGCTAATGTG
CCTAATGAGACCTCGAACCCAAGGCTGGAAGGTGATCGCTAAACCCTCATGTGAAGAAACGGTC
CCAGAGACTTGTCTCAGCATGGGTCCTAGACTGCAGCCTTCCAGATGCACATGTGGCCTTAAAA
TCCTGGTGAATCAGGGCAGCCTGTGGACACCCCGGCTGCACCACTGGTCGGAGCCTCTTATGAA
GTGTTTATATTTAGAGATGTTTATATTTAAGTCGCTATTTTTTAAATAAAGCATTTCTATTGAC
CGTAA

hide sequence

RefSeq Acc Id:

XM_017590382 ⟹ XP_017445871

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	252,685,406 - 252,729,303 (-)	NCBI
mRatBN7.2	1	242,736,189 - 242,778,894 (-)	NCBI
Rnor_6.0	1	263,625,503 - 263,667,207 (-)	NCBI

Sequence:

show sequence

AACAGTCGGTGCTCTTAACCTCTGAGCCATCTCTGCTGTGCCTTTTGCTTTATAGCATATGGTT
TTTGTGATGTCCCAAGTGAGCATCCCTTTGTTTCTCTTCTCAATGTTCATGTGTAAGACCTATC
TTCTATCTGTGTGTCTGTCTGTCTGTCAGAAACTTGCTGGATTCTCACAGGCACTTTCACGCCA
TCCTTTACGAGTCTAGCCACATTCTCTAGTTCTTAAACATAGTGTATAAACTGGATGGAAAATA
ATTTTCGAAAATGGATGGTGTGATGCTTTCTGATAAGAGTATCTAAGGAAAGAGAACATAACTT
TCTCAGACAAGACATTTCACACCGTGATTGCCATGACAGAGAAAGTGATGGGACAACCTATTCT
TCCTTCAGTGCGGTGGCTTCTGTGCCAGAGCTTGTGTGGCTGTGGGTTTGAGTGTGTACTGCCT
GGCTACTGGAGTCTCACAGGAGCGAAGCCCTCAGGCCAGAGGAGTGTGCTTCTCCGAGAAGAGA
ACCTTGGCTTTCCTTGGGGTCTAGAGGCCCCATTGGAGCTGCATTTGCTTTCATTCGGTGGCTT
CCTGAACGTGAGTCTGCAGGTTGATATAAGACCCTCCCCAGCCTGGCTCTGAAAGGGAGCTCTT
TCTCACATCACCTTTTCTACAAGACCTTGAGGGCATCAGAGTGCAGGTCCCTTCAGTGCGTAAA
GCAGCCAAGCCAGTCCGACCAGCTCAGGGAAACACCAACAATGCTGCCAAAACCAATCGCATGG
ATTCTAGTTACTAATTATCTCCTGGCCCCTGAGGAGAAGATAGAGTAGCTCACTGATTGGTTCC
TGAAGTTGAAATGACTCTACAGTGCCCTGTACTCCAGCCAGAGCAACTGGAAGACTGCAGAGCT
GTGGGAGACATTTTAAGGACAGAGCCAGCCTCAGGCTACACTGCACCTGTTGAGTTTCGGCCCA
GCCCCCGGAGCCCATGGGACAGAGAAGCAAAGCCCATGATCACACTGGCCATGAGTGAGACACG
GGGGATTGGGAAGGAAAGGGTCGCAGATCGGAAAGGGCCTCGGGGCTCCAGCTGGGAGTATGAA
GACTGCAGGAGCCTCCGGAAGAGGAGCCTTACTGAGCCAGGTGGGCTCCACCCTGAAAATGACC
TGGACACTACAAGCCGGGCCAAAAGGCGGAATCGGCCCTACAGAAAAAGGGATTGTGGGTACTG
GGATTTTGAGCAGAGTGAATCAGACTTTATGGACTCTGGAGAAACAAATCGAAGTGGAAAGGAG
GGTCTCTTCCCAGAAGGCTTTGCTGCTTACAGGAATGGAGAAGACATAGAGTGTATGAATGTCA
GGCCTGGGACAGAGGAACATCTACTTCTGCGAAGCCGGGCTGGGATCCCGGAAGCTGGAGAATG
TGAACCGGTGAATGGCTATGTAAATTGTAAGGACCTGATTTATAATCCTGAGGACCCGGAAAAA
GCCAGACATAGGAACGGCTACAGGGATCTGGGTGACTCTTTGGAGAATTTATATCAACCTCGGA
ACTGGTACATGGGCCTGAGGAATTTTAATTACAACCTTGAGGATTGTAAAGGAATTAACTTAGA
TCACAGAGATCACACTGACTCGTGTCTCGTTCCTGGGCCTTATACCAACGGTGAGTCTCTGGAG
CCTCCAGATTTGAATGGGGTCGCCGGAGGTGAAGAATTTGTTAGGTACTATGAAGGAGACAGGA
AGGTTTGCCAACGTAACAAAATCTACCTGAGAGCAAAGACTGACTGTCCCGCGGATCTGGCTAA
TGATACAGAAAATAAAGACCATGATACTCTCTCTTCAAACTCTGAGTCTCATGAGTACAGACAA
GCTGGTTCTCTCCATCGAGGAGAGGATTTGGAGTATGAGGACATCGACACGGGAATGAGGGTCC
CTGGAAACGGAGGAGACATCTCCGAGGGTCTGCAGCAGCATCCTGGGGGCGAGCAAAGAGAACA
TGGCTTTGGGATTGCCCGGGCCCCTGCATTAGAAAATACCTGGCACTTGGGGGAGATGAGAGCT
TTAAGTGGTTCAGAGCCCTGGGGAAGGAATGGCTGCTTCCGCCGCACGGCTCCCAGCACCCTGA
GACGCTCGGAGTTCGTGCAAAGAAGGAAGAAGCCTCAAGAGATGACGCTCCTCTCCTCCCAGTC
TTCATCCCTGGCGGCCCCCTCTGGGTCTGTGTCCACCGAAAAGCCTGAGCAGAGGATGCTGGAG
AAGAGAGCCAAGGTGGTGGCTGAGCTTTTGCAGACGGAAAAAGACTACATCCGGGATCTGGAGA
TGTGCGTCGAGAGGGTCATGGTGCCCCTGCAGCAGGCACAGGTACCAAACATTGATTTTGAAGG
ACTTTTTGGAAACATGCAAACGGTGATTAAAGTCTCAAAGCAGTTGTTGGCAGCCTTGGAAATC
ACCGATGCTGTAGGACCCGTGTTTCTGGATCACCGGGACGAACTTGAGGGGACGTACAGACTTT
ACTGCCAGAACCACGACGAAGCCATTTCACTGCTAGATATCTACGAGAAGGACGAGAGGATCCA
GAAGCATCTCCAGGACTACTTGGCAGATCTCAAGAGCCTGTACCACGAATGGGGATGCACCAAT
TACATCAACCTGGGCTCTTTCCTCATCAAGCCCGTACAGAGAATAATGCGTTACCCGCTGCTGC
TAATGGAGCTGCTGAATTCCACCCCGGAATCCCACCCGGATAAAGCGCCTTTAACCAGCGCAGT
CCTGGCCATCAAGGAAATCAATGCTAACATTAATGAATATAAGCGTCGGAAGGATCTAGTGCTT
AAGTACCGCAAAGCGGATGAAGACAGCCTCATGGAGAAGATCTCCAAGCTCAACATCCACTCCA
TCATCAAGAAGTCCAGCCGGGTTAGCAGTCACCTGAAACACCTCACTGGCTTCGCTCCCCAGCT
AAAAGATGAAGCATTTGAAGAGACAGAAAAGAACTTCCGGATGCAGGAGAGATTGATTAAATCT
TTTATCCGAGACCTGTCCCTCTACCTCCAGCACATACGGGAATCTGCTTGTGTGAAGGTGGTGG
CAGCCATGAGCATATGGGATCTGTGCATGGAGAGGGGACATCATGACCTGGAACAGTTTGAGAA
GGTGCATCGATACATCAGCGACCAGCTCTTCACACGGTTTAAAGAGAGGACCGAGCGGCTTGTC
ATCAATCCCTTAAACCAGCTGTTGAACATGTTCACGGGGCCCTACAAGCTGGTGCAGAAGCGTT
TCGACAAGCTCCTGGACTTCTACAACTGCACTGAGCGAGCGGAGAAGCTTAAGGACAAGAAGAC
TCTGGAGGATCTCCAGTCAGCCCGAAACAACTACGAGGCCCTGAACTCCCAGCTGCTGGACGAG
CTGCCCAAGTTCCAGCAGTACGCCCAGAGCCTCTTCACCAACTGCATCCACGGCTACGCCGAAG
CCCACTGTGACTTCGTGCAGAAGGCGCTGGAGCAGCTGCAGCCCCTGCTGTCGCTACTGAAAGC
CAGCGACCGAGAAGGCAACCTGATCGCCATCTTCCACGAGGAGCACAGCCGGGTCCTTCAGCAG
CTCCAGGTCTTCACTTTCTTCCCCGAGGCCCTCCCAGCCCCCAGGAAGCCCTTCGAGAGGAAAA
CCACAGACCGCCAGTCATCACGGAAGGCCCTCCTGGGCATGCCAAGCTACATGCTGCAGTCAGA
AGAACTGCGGAGCTCCCTGCTGGCGAGGTACCCACCGGAAAAGCTCTTCCATGTCCAACGCAAC
TTCAACGCAGCTCAGGACTTGGATGTCTCCCTTTTGGAAGGTGATCTGGTGGGCGTGATCAAAA
AGAAAGACCCCATGGGCAGCCAGAACCGCTGGCTCGTGGACAACGGAGTCACCAAAGGCTTTGT
CTACAGCTCCTTCCTGAAGCCTTACAACCCTCGATGCAGCCATTCGGATTCCTCTGTGGTCAGC
CACTCTTCCACAGAGTCCGAGCACAGCGGCTCCTCCCCCAGCTTCCATCGCCAGAACAGCAGCA
GTGCCTTGACCTTCAACTCCAACAGCATGACTGTGTCCTTCACCTCAGGGCTTCCCCAGAAGCA
GCCTCAGGACACATCTCCACTGAGGGAATGTGTCCCCGAAACTCTTGGTGTGTCCTCGAACACG
GGGAACCCAGAAACTGGACCTTCCCCATGCCCTTCAGATCCAGGCTTCTCCTGCCAGCGCAGGC
CGGGCAACCCTGCAGATGGCACCCGAGAGATCAGCCAACCTGCTTCAACCTTGAGGGGCTGCCA
GCGACGCTCCCTGCATTCCGAAGTGCTCGGTTACCCTGTGCCAGGGCGCAGTGACCAAGGCAGT
GACTCCATAAAAGGAACCTCAAGAGCCTGTCAGACCGCAGGAGACAGAGACAGAGGGCTCGGAA
GCAGCGAGGCAGAGGGCAACCAGGTCTATTTTGCCATCTACACCTTCAAGGCACGAAACCCAAA
TGAGCTGACTGTGTTGGCCAATCAGAGACTCAGGATCCTTGAGTTTAAAGACGTCACAGGCAAT
ACAGAGTGGTGGTTGGCTGAAGTTAACGGAAAGAAGGGCTACGTCCCGTCCAACTATATCCGAA
AAACTGAGTACACCTGAGCCAAGTTGCCTTGGGTCCCCACCTCGAGGCCGCTTTCAGTCCACTG
AGAAGTTCTGGTGGGCTCCAGGCACCTGCTGTCAAGCAGGGCTCCACCCCACTGCCTATCCATA
ACGCGGAGCGCACAATAAGCTTTGTTCTGATTGGGTTGTACACTTTGATGCTCGCTAGAATTTG
ACGTGGGTGGACCCCAAAGGTTTGCCAGTGACTCAGTGTCCACAGGAAGCAGGCCAAATGCTGG
TGTCAGCTTTGGGAAATGAGACATTCCCAATCAGAAATGCAGTATTGTATGCCGGAAGCTGTAT
GGCATCAGAGGATGCTGGCATTGGCTGCCTCGTACGCCTTGGTCAACTGAGTAGTCACGGGGTG
AGGAGGAGTGGGTTCCAAGACCTTCTCCATCTCGCCTCCATACACAGGAACAGTTATGTCAGGA
TCACACCAAACCTGGTGTGTCAAGGTGTCTAAGACACCCCGGTGCCCGGCAGCCTTCTCTCTCT
GACACTTGCCCCTCACTCCTAGTTCTTAACACGATAGCCTTTCACTGCTTCCCCGTTGAATGTT
TACAGTCTAACTTTTCTTCCACCCGTGAGTCTGGACCATGTGTCTGGAAGGTTCTCTTACCTTG
TCGAACATGGTCATCTGCCTCTTCCCTGACACTCATCTTAATTTTATTTGATCTTGATGGTGTC
TCCTAACCTTTCTCCCTATACTTATTGACTGACAAGATTTCCCTAGTCTAGCGGGCTTGGCACT
CCGGCCAGCCACTGAAAGTATTCTGCTGGGTGGAAGCCAGACGCCTGCCCCACCCCCTTCCACC
GCAGCACTCTGCTGCGGTCTAGTCACCTCCACACGTGCTCAAGACAACCCACGTGGCTTATTTT
GAAGTAGGTAGGACCGGTGGCCGAAGAAGCTTGCCTTAGAGTTTGGAAATAAGAATTTTCTTTC
TCACCACCAACTGCCATACTTCAAGGACAATATTTCAAAGTCAGACAGATGCTAATGTGCCTAA
TGAGACCTCGAACCCAAGGCTGGAAGGTGATCGCTAAACCCTCATGTGAAGAAACGGTCCCAGA
GACTTGTCTCAGCATGGGTCCTAGACTGCAGCCTTCCAGATGCACATGTGGCCTTAAAATCCTG
GTGAATCAGGGCAGCCTGTGGACACCCCGGCTGCACCACTGGTCGGAGCCTCTTATGAAGTGTT
TATATTTAGAGATGTTTATATTTAAGTCGCTATTTTTTAAATAAAGCATTTCTATTGACCGTAA

hide sequence

RefSeq Acc Id:

XM_039080062 ⟹ XP_038935990

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	252,685,406 - 252,771,570 (-)	NCBI
mRatBN7.2	1	242,736,189 - 242,822,326 (-)	NCBI

RefSeq Acc Id:

XM_039080066 ⟹ XP_038935994

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	252,685,406 - 252,753,098 (-)	NCBI
mRatBN7.2	1	242,736,189 - 242,806,260 (-)	NCBI

RefSeq Acc Id:

XM_063264624 ⟹ XP_063120694

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	252,685,406 - 252,778,627 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001363862	(Get FASTA)	NCBI Sequence Viewer
	NP_001381930	(Get FASTA)	NCBI Sequence Viewer
	XP_008758708	(Get FASTA)	NCBI Sequence Viewer
	XP_017445871	(Get FASTA)	NCBI Sequence Viewer
	XP_038935990	(Get FASTA)	NCBI Sequence Viewer
	XP_038935994	(Get FASTA)	NCBI Sequence Viewer
	XP_063120694	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL94265	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000064242
	ENSRNOP00000077401
	ENSRNOP00000087128
GenBank Protein	M0R4F8	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_008758708 ⟸ XM_008760486
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2UNI9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGTNSAQAAPGSMEPGSVVRAIFDFCPSVSEELPLFVGDVIEVLTVVDEFWLLGKKEDVTGQFP SSFVEIVTIPSLKEGERLFVCTCDFISREPNSLSLHRGDLVIIDGTPTAGWLQGRSSLGARGFF PSSCIHELCLSSQSRQWHSQNMLLQVPEYSMGQARALMGLSAQLDEELDFREGDVITIIGVPEP GWFEGELEGRRGIFPEGFVELLGPLRTADESVNAGSGDDSTLNDEVDVSPEEVESEGDEDDQQA GTYGIALYRFQALESNELDFEVGDKIRILGTLEDGWLEGRLKGKTGIFPHRFVKLCPSNRSEET MALPQGDSFPKNSESSAGEMGDSVVEEARQDPQECEEETPDSGLPEQTSEEPLDHVAPECVVDK ISGQDEDASGSSPDVDLEGPRAEDPSTPDLSQEVNGISSLPPQVPLQPEEEKSQHYLTAGGSRQ CPDTFSKLFPLEAKTRNYSSLPPRRTYTQGWSLQKPAPHLHRASSLTASRVNRPGHFSHTAMAS CAQKHQTSAENAASLCCAPERPKRRPGLPDKEPATEITPASQGDNLDLDSKLTQQLIEFEKSLS GPSTEPKKIVRRFSIMDFYSEKDIVRGSSNSLPSRNFPERRKALRPPPPRPHTPTSTSPHLLVD QSPKPGPPLVVRPSRPAPLPPPTQQRLNTASPKPTSCALPGWEAPEKEGSEYTEKSPAQLFPCP SVLARIQDVEHDLDMHTRAQEELNLLLEEKQDESLRAETLETLKSYESTIQSLNLELQQLREMT LLSSQSSSLAAPSGSVSTEKPEQRMLEKRAKVVAELLQTEKDYIRDLEMCVERVMVPLQQAQVP NIDFEGLFGNMQTVIKVSKQLLAALEITDAVGPVFLDHRDELEGTYRLYCQNHDEAISLLDIYE KDERIQKHLQDYLADLKSLYHEWGCTNYINLGSFLIKPVQRIMRYPLLLMELLNSTPESHPDKA PLTSAVLAIKEINANINEYKRRKDLVLKYRKADEDSLMEKISKLNIHSIIKKSSRVSSHLKHLT GFAPQLKDEAFEETEKNFRMQERLIKSFIRDLSLYLQHIRESACVKVVAAMSIWDLCMERGHHD LEQFEKVHRYISDQLFTRFKERTERLVINPLNQLLNMFTGPYKLVQKRFDKLLDFYNCTERAEK LKDKKTLEDLQSARNNYEALNSQLLDELPKFQQYAQSLFTNCIHGYAEAHCDFVQKALEQLQPL LSLLKASDREGNLIAIFHEEHSRVLQQLQVFTFFPEALPAPRKPFERKTTDRQSSRKALLGMPS YMLQSEELRSSLLARYPPEKLFHVQRNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLVDNG VTKGFVYSSFLKPYNPRCSHSDSSVVSHSSTESEHSGSSPSFHRQNSSSALTFNSNSMTVSFTS GLPQKQPQDTSPLRECVPETLGVSSNTGNPETGPSPCPSDPGFSCQRRPGNPADGTREISQPAS TLRGCQRRSLHSEVLGYPVPGRSDQGSDSIKGTSRACQTAGDRDRGLGSSEAEGNQVYFAIYTF KARNPNELTVLANQRLRILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTEYT hide sequence

RefSeq Acc Id:	XP_017445871 ⟸ XM_017590382
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6A777 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTLQCPVLQPEQLEDCRAVGDILRTEPASGYTAPVEFRPSPRSPWDREAKPMITLAMSETRGIG KERVADRKGPRGSSWEYEDCRSLRKRSLTEPGGLHPENDLDTTSRAKRRNRPYRKRDCGYWDFE QSESDFMDSGETNRSGKEGLFPEGFAAYRNGEDIECMNVRPGTEEHLLLRSRAGIPEAGECEPV NGYVNCKDLIYNPEDPEKARHRNGYRDLGDSLENLYQPRNWYMGLRNFNYNLEDCKGINLDHRD HTDSCLVPGPYTNGESLEPPDLNGVAGGEEFVRYYEGDRKVCQRNKIYLRAKTDCPADLANDTE NKDHDTLSSNSESHEYRQAGSLHRGEDLEYEDIDTGMRVPGNGGDISEGLQQHPGGEQREHGFG IARAPALENTWHLGEMRALSGSEPWGRNGCFRRTAPSTLRRSEFVQRRKKPQEMTLLSSQSSSL AAPSGSVSTEKPEQRMLEKRAKVVAELLQTEKDYIRDLEMCVERVMVPLQQAQVPNIDFEGLFG NMQTVIKVSKQLLAALEITDAVGPVFLDHRDELEGTYRLYCQNHDEAISLLDIYEKDERIQKHL QDYLADLKSLYHEWGCTNYINLGSFLIKPVQRIMRYPLLLMELLNSTPESHPDKAPLTSAVLAI KEINANINEYKRRKDLVLKYRKADEDSLMEKISKLNIHSIIKKSSRVSSHLKHLTGFAPQLKDE AFEETEKNFRMQERLIKSFIRDLSLYLQHIRESACVKVVAAMSIWDLCMERGHHDLEQFEKVHR YISDQLFTRFKERTERLVINPLNQLLNMFTGPYKLVQKRFDKLLDFYNCTERAEKLKDKKTLED LQSARNNYEALNSQLLDELPKFQQYAQSLFTNCIHGYAEAHCDFVQKALEQLQPLLSLLKASDR EGNLIAIFHEEHSRVLQQLQVFTFFPEALPAPRKPFERKTTDRQSSRKALLGMPSYMLQSEELR SSLLARYPPEKLFHVQRNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLVDNGVTKGFVYSS FLKPYNPRCSHSDSSVVSHSSTESEHSGSSPSFHRQNSSSALTFNSNSMTVSFTSGLPQKQPQD TSPLRECVPETLGVSSNTGNPETGPSPCPSDPGFSCQRRPGNPADGTREISQPASTLRGCQRRS LHSEVLGYPVPGRSDQGSDSIKGTSRACQTAGDRDRGLGSSEAEGNQVYFAIYTFKARNPNELT VLANQRLRILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTEYT hide sequence

Ensembl Acc Id:

ENSRNOP00000064242 ⟸ ENSRNOT00000074810

RefSeq Acc Id:	XP_038935990 ⟸ XM_039080062
- Peptide Label:	isoform X2
- UniProtKB:	M0R4F8 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038935994 ⟸ XM_039080066
- Peptide Label:	isoform X2
- UniProtKB:	M0R4F8 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	NP_001363862 ⟸ NM_001376933
- Peptide Label:	isoform 2
- UniProtKB:	A0A8I5Y9I1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000077401 ⟸ ENSRNOT00000096155

Ensembl Acc Id:

ENSRNOP00000087128 ⟸ ENSRNOT00000096853

RefSeq Acc Id:	NP_001381930 ⟸ NM_001395001
- Peptide Label:	isoform 1
- UniProtKB:	M0R4F8 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063120694 ⟸ XM_063264624
- Peptide Label:	isoform X3

Protein Domains

BAR DH SH3

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0R4F8-F1-model_v2	AlphaFold	M0R4F8	1-1577	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13690937

Promoter ID:

EPDNEW_R1455

Type:

single initiation site

Name:

Dnmbp_1

Description:

dynamin binding protein

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	1	263,718,720 - 263,718,780	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1583840	AgrOrtholog
BioCyc Gene	G2FUF-55617	BioCyc
Ensembl Genes	ENSRNOG00000050742	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000074810	ENTREZGENE
	ENSRNOT00000096155	ENTREZGENE
	ENSRNOT00000096853	ENTREZGENE
Gene3D-CATH	1.20.1270.60	UniProtKB/Swiss-Prot
	1.20.900.10	UniProtKB/Swiss-Prot
	SH3 Domains	UniProtKB/Swiss-Prot
InterPro	AH/BAR_dom_sf	UniProtKB/Swiss-Prot
	BAR_dom	UniProtKB/Swiss-Prot
	DBL_dom_sf	UniProtKB/Swiss-Prot
	DH-domain	UniProtKB/Swiss-Prot
	DNMBP_SH3_C1	UniProtKB/Swiss-Prot
	DNMBP_SH3_N1	UniProtKB/Swiss-Prot
	DNMBP_SH3_N2	UniProtKB/Swiss-Prot
	DNMBP_SH3_N3	UniProtKB/Swiss-Prot
	Dynamin-Rho_GEF	UniProtKB/Swiss-Prot
	GDS_CDC24_CS	UniProtKB/Swiss-Prot
	SH3-like_dom_sf	UniProtKB/Swiss-Prot
	SH3_domain	UniProtKB/Swiss-Prot
NCBI Gene	309362	ENTREZGENE
PANTHER	NUCLEAR FUSION PROTEIN FUS2	UniProtKB/Swiss-Prot
	PTHR22834:SF19	UniProtKB/Swiss-Prot
Pfam	BAR	UniProtKB/Swiss-Prot
	RhoGEF	UniProtKB/Swiss-Prot
	SH3_1	UniProtKB/Swiss-Prot
	SH3_2	UniProtKB/Swiss-Prot
	SH3_9	UniProtKB/Swiss-Prot
PhenoGen	Dnmbp	PhenoGen
PRINTS	P67PHOX	UniProtKB/Swiss-Prot
PROSITE	BAR	UniProtKB/Swiss-Prot
	DH_1	UniProtKB/Swiss-Prot
	DH_2	UniProtKB/Swiss-Prot
	SH3	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000050742	RatGTEx
SMART	BAR	UniProtKB/Swiss-Prot
	RhoGEF	UniProtKB/Swiss-Prot
	SH3	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF103657	UniProtKB/Swiss-Prot
	SSF48065	UniProtKB/Swiss-Prot
	SSF50044	UniProtKB/Swiss-Prot
UniProt	A0A8I5Y9I1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A777	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2UNI9	ENTREZGENE, UniProtKB/TrEMBL
	DNMBP_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-04	Dnmbp	dynamin binding protein	LOC309362	similar to Dynamin-binding protein (Scaffold protein Tuba)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-11-19	LOC309362	similar to Dynamin-binding protein (Scaffold protein Tuba)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

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