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Gene: Ankrd6 (ankyrin repeat domain 6) Rattus norvegicus

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Symbol:

Ankrd6

Name:

ankyrin repeat domain 6

RGD ID:

1583731

Description:

Predicted to be involved in establishment or maintenance of cell polarity and regulation of Wnt signaling pathway. Predicted to act upstream of or within negative regulation of canonical Wnt signaling pathway and positive regulation of Wnt signaling pathway, planar cell polarity pathway. Predicted to be located in cytoplasm and nucleus. Orthologous to human ANKRD6 (ankyrin repeat domain 6); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

ankyrin repeat domain-containing protein 6; LOC500430; MGC188478; similar to ankyrin repeat domain 6

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ANKRD6 (ankyrin repeat domain 6)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Ankrd6 (ankyrin repeat domain 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ankrd6 (ankyrin repeat domain 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ANKRD6 (ankyrin repeat domain 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ANKRD6 (ankyrin repeat domain 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ankrd6 (ankyrin repeat domain 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ANKRD6 (ankyrin repeat domain 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ANKRD6 (ankyrin repeat domain 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ankrd6 (ankyrin repeat domain 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ankrd6 (ankyrin repeat domain 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ANKRD6 (ankyrin repeat domain 6)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ankrd6 (ankyrin repeat domain 6)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ankrd6b (ankyrin repeat domain 6b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ankrd6a (ankyrin repeat domain 6a)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	ankrd6a (ankyrin repeat domain 6a)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PhylomeDB)
Drosophila melanogaster (fruit fly):	dgo	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Drosophila melanogaster (fruit fly):	dgo	Alliance	DIOPT (Ensembl Compara\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ankrd6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	51,999,225 - 52,139,623 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	51,999,221 - 52,139,594 (-)	Ensembl				GRCr8
mRatBN7.2	5	47,197,981 - 47,343,183 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	47,202,873 - 47,343,090 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	49,344,727 - 49,455,057 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	50,943,885 - 51,054,241 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	50,889,350 - 51,000,727 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	48,052,610 - 48,167,568 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	48,052,401 - 48,194,294 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	52,640,128 - 52,778,289 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	49,098,952 - 49,211,771 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	45,962,187 - 46,073,919 (-)	NCBI		Celera
Cytogenetic Map	5	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,1-dichloroethene (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium dichloride (EXP)

chlordecone (ISO)

diarsenic trioxide (ISO)

dibutyl phthalate (EXP)

diuron (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

entinostat (ISO)

ethanol (ISO)

fenvalerate (EXP)

fulvestrant (ISO)

lead(0) (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methotrexate (ISO)

methoxychlor (EXP)

methylmercury chloride (ISO)

N-ethyl-N-nitrosourea (ISO)

nickel sulfate (ISO)

paracetamol (EXP)

perfluorohexanesulfonic acid (ISO)

permethrin (ISO)

phenylmercury acetate (ISO)

pyrogallol (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

tert-butyl hydroperoxide (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

zebularine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

establishment or maintenance of cell polarity (IBA)

negative regulation of canonical Wnt signaling pathway (ISO)

positive regulation of Wnt signaling pathway, planar cell polarity pathway (ISO)

regulation of Wnt signaling pathway (IBA)

Cellular Component

cytoplasm (IEA,ISO)

nucleus (IEA,ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15647854	PMID:19591803

Genomics

Comparative Map Data

Ankrd6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	51,999,225 - 52,139,623 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	51,999,221 - 52,139,594 (-)	Ensembl				GRCr8
mRatBN7.2	5	47,197,981 - 47,343,183 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	47,202,873 - 47,343,090 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	49,344,727 - 49,455,057 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	50,943,885 - 51,054,241 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	50,889,350 - 51,000,727 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	48,052,610 - 48,167,568 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	48,052,401 - 48,194,294 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	52,640,128 - 52,778,289 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	49,098,952 - 49,211,771 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	45,962,187 - 46,073,919 (-)	NCBI		Celera
Cytogenetic Map	5	q21	NCBI

ANKRD6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	89,433,152 - 89,633,834 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	89,433,119 - 89,633,838 (+)	Ensembl			hg38	GRCh38
GRCh37	6	90,142,871 - 90,343,553 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	90,199,616 - 90,400,124 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	6	90,199,650 - 90,397,935	NCBI
Celera	6	90,561,418 - 90,762,379 (+)	NCBI		Celera
Cytogenetic Map	6	q15	NCBI
HuRef	6	87,360,022 - 87,560,501 (+)	NCBI		HuRef
CHM1_1	6	90,240,543 - 90,441,151 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	90,642,513 - 90,843,208 (+)	NCBI		T2T-CHM13v2.0

Ankrd6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	32,804,027 - 32,950,884 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	32,804,035 - 32,950,841 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	32,804,027 - 32,950,885 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	32,804,035 - 32,950,841 (-)	Ensembl			mm10	GRCm38
MGSCv37	4	32,891,010 - 33,037,801 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	33,132,648 - 33,279,439 (-)	NCBI		MGSCv36	mm8
Celera	4	32,543,432 - 32,691,408 (-)	NCBI		Celera
Cytogenetic Map	4	A5	NCBI
cM Map	4	14.42	NCBI

Ankrd6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955411	16,214,094 - 16,360,573 (+)	Ensembl
ChiLan1.0	NW_004955411	16,206,819 - 16,358,322 (+)	NCBI	ChiLan1.0	ChiLan1.0

ANKRD6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	109,643,051 - 109,714,379 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	107,543,901 - 107,615,223 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	87,306,496 - 87,509,352 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	90,631,672 - 90,782,762 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	90,710,411 - 90,782,762 (+)	Ensembl			panPan2	panpan1.1

ANKRD6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	48,646,173 - 48,844,231 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	48,646,173 - 48,842,451 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	48,453,031 - 48,650,863 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	49,455,055 - 49,652,998 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	49,455,072 - 49,651,210 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	48,771,322 - 48,968,238 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	48,671,428 - 48,869,392 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	48,863,886 - 49,061,782 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ankrd6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	83,718,038 - 83,857,904 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936510	2,611,290 - 2,752,843 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936510	2,612,492 - 2,665,063 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ANKRD6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	57,438,000 - 57,645,957 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	57,437,947 - 57,648,262 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	64,482,282 - 64,551,241 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ANKRD6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	14,187,531 - 14,392,800 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	14,321,797 - 14,389,917 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666040	190,504,832 - 190,709,462 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ankrd6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624799	4,534,668 - 4,598,814 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624799	4,532,071 - 4,598,874 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ankrd6
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	110,087,503 - 110,230,079 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ankrd6
964 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	702
Count of miRNA genes:	301
Interacting mature miRNAs:	378
Transcripts:	ENSRNOT00000065912
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1298067	Scl15	Serum cholesterol level QTL 15	4.8	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	38011670	83011670	Rat
1578776	Stresp18	Stress response QTL 18	2.9		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	5	32751649	77751649	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	44924861	153890773	Rat
6907115	Mcs29	Mammary carcinoma susceptibility QTL 29			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	38004331	83004331	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	38207390	136631402	Rat
1358353	Srcrtb2	Stress Responsive Cort Basal QTL 2	3.48	0.003	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	23671493	79046465	Rat
1300117	Hrtrt8	Heart rate QTL 8	3.49		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	5	8627230	52665523	Rat
634305	Mamtr1	Mammary tumor resistance QTL 1		0.0001	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	17576633	62576633	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	48523123	134369373	Rat
1578774	Tcas8	Tongue tumor susceptibility QTL 8	3.47		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	15707451	60707451	Rat
1598807	Glom12	Glomerulus QTL 12	2.7		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	38011670	83011670	Rat
1302786	Kidm8	Kidney mass QTL 8	28.15		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	38011670	83011670	Rat
1331782	Rf36	Renal function QTL 36	3.296		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	39019942	102105896	Rat
6903292	Stl28	Serum triglyceride level QTL 28	2.6	0.0073	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	5	33311673	78311673	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
1578767	Stresp17	Stress response QTL 17	4.3	0.01	blood aldosterone amount (VT:0005346)	plasma aldosterone level (CMO:0000551)	5	32751649	77751649	Rat
1641922	Alcrsp8	Alcohol response QTL 8			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	5	17486080	62486080	Rat
2313085	Bss59	Bone structure and strength QTL 59	2.9	0.0001	long bone metaphysis morphology trait (VT:0000133)	tibia midshaft total cross-sectional area (CMO:0001715)	5	8627230	53627230	Rat
1641912	Alcrsp18	Alcohol response QTL 18			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	39985948	84985948	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	6922282	81330203	Rat
6903306	Scl35	Serum cholesterol QTL 35	2.6	0.0073	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	33311673	78311673	Rat
1576317	Eutr2	Estrogen induced uterine response QTL 2		0.01	uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	39526924	84526924	Rat
7394712	Emca13	Estrogen-induced mammary cancer QTL 13			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	14606078	59606078	Rat
1331773	Scl26	Serum cholesterol level QTL 26	3.065		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	48523123	91770353	Rat
1331771	Rf35	Renal function QTL 35	4.36965		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	91770353	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	36460764	136631402	Rat
8662454	Vetf3	Vascular elastic tissue fragility QTL 3	27.4		artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	5	7065535	74335773	Rat
1641903	Alcrsp3	Alcohol response QTL 3			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	17486080	62486080	Rat
1331756	Rf34	Renal function QTL 34	4.16275		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	87027358	Rat
8552954	Pigfal14	Plasma insulin-like growth factor 1 level QTL 14	9		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	26023211	71023211	Rat
2303577	Gluco47	Glucose level QTL 47	3		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	16520019	61520019	Rat
1600358	Mamtr5	Mammary tumor resistance QTL 5			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	23671493	68671493	Rat

Markers in Region

BE119283

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	47,203,128 - 47,203,300 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	48,052,867 - 48,053,038	NCBI	Rnor6.0
Rnor_5.0	5	52,640,385 - 52,640,556	UniSTS	Rnor5.0
RGSC_v3.4	5	49,099,200 - 49,099,371	UniSTS	RGSC3.4
Celera	5	45,962,435 - 45,962,606	UniSTS
RH 3.4 Map	5	247.2	UniSTS
Cytogenetic Map	5	q21	UniSTS

RH137753

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	47,202,948 - 47,203,174 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	48,052,687 - 48,052,912	NCBI	Rnor6.0
Rnor_5.0	5	52,640,205 - 52,640,430	UniSTS	Rnor5.0
RGSC_v3.4	5	49,099,020 - 49,099,245	UniSTS	RGSC3.4
Celera	5	45,962,255 - 45,962,480	UniSTS
RH 3.4 Map	5	254.1	UniSTS
Cytogenetic Map	5	q21	UniSTS

BE118115

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	47,213,821 - 47,213,995 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	48,063,571 - 48,063,744	NCBI	Rnor6.0
Rnor_5.0	5	52,650,711 - 52,650,884	UniSTS	Rnor5.0
RGSC_v3.4	5	49,109,741 - 49,109,914	UniSTS	RGSC3.4
Celera	5	45,972,748 - 45,972,921	UniSTS
RH 3.4 Map	5	247.7	UniSTS
Cytogenetic Map	5	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	86	85	54	89	54	6	348	189	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001134969	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001438209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593571	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110548	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110550	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288211	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288212	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288214	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC168675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000065912 ⟹ ENSRNOP00000061313

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	51,999,221 - 52,139,423 (-)	Ensembl
mRatBN7.2 Ensembl	5	47,202,873 - 47,343,090 (-)	Ensembl
Rnor_6.0 Ensembl	5	48,052,610 - 48,194,294 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000081748 ⟹ ENSRNOP00000069829

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	51,999,221 - 52,139,423 (-)	Ensembl
mRatBN7.2 Ensembl	5	47,202,873 - 47,343,090 (-)	Ensembl
Rnor_6.0 Ensembl	5	48,052,401 - 48,194,251 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000085856

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	5	48,084,643 - 48,085,291 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000088179 ⟹ ENSRNOP00000074598

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	51,999,221 - 52,139,423 (-)	Ensembl
mRatBN7.2 Ensembl	5	47,205,022 - 47,343,090 (-)	Ensembl
Rnor_6.0 Ensembl	5	48,052,619 - 48,165,317 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097606 ⟹ ENSRNOP00000089036

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	52,001,370 - 52,139,423 (-)	Ensembl
mRatBN7.2 Ensembl	5	47,205,022 - 47,343,090 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000128239 ⟹ ENSRNOP00000105814

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	51,999,221 - 52,095,121 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000137740 ⟹ ENSRNOP00000098716

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	51,999,221 - 52,139,594 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000151182 ⟹ ENSRNOP00000102555

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	51,999,221 - 52,029,408 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000164914 ⟹ ENSRNOP00000105781

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	51,999,221 - 52,139,423 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000173159 ⟹ ENSRNOP00000106482

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	51,999,221 - 52,139,423 (-)	Ensembl

RefSeq Acc Id:

NM_001134969 ⟹ NP_001128441

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,999,229 - 52,112,700 (-)	NCBI
mRatBN7.2	5	47,202,881 - 47,316,359 (-)	NCBI
Rnor_6.0	5	48,052,619 - 48,165,317 (-)	NCBI
Rnor_5.0	5	52,640,128 - 52,778,289 (-)	NCBI
RGSC_v3.4	5	49,098,952 - 49,211,771 (-)	RGD
Celera	5	45,962,187 - 46,073,919 (-)	RGD

Sequence:

show sequence

TGCTGTCGTGCCTTTGTGCTGGCTGTCCCTTGTCCCACAGAGGCTAGCGAGGTCGGTAAGAGTC
CTCCATTGTGAAACTCCATTGTGGTCTGAGGCTGGACTGAAGGTTCTGCCAGCCCGCGTGGCCA
GAGCTGCGTCTTGGGAGTGCTCTTTCCTGGATGTGGACAGAGGGACTCTTGACAGGGTTTGAAG
TGGAAATGAGAACTACTAGGGCCTGAAGATGGAGTAGTAACAAAGGCATCCCCCATGATTCTCA
GCACCCTTCCCTGTGGACTCCAGCCCCAGCCAGAGGCTGCATGTGGAGCTGAAGAAACTGACCA
GCTGCTTTCCTGAGAGCCCCTTTCTCTCCTAATTCATGAGCCAGCAGGATGCGGTCGCCGCGCT
TTCAGAACGCCTGCTCATAGCTGCGTACAAAGGCCAAACAGAGAATGTGGTTCAGCTCATCAAC
AAGGGTGCCAAGGTAGCGGTTACCAAGCATGGCCGGACCCCCTTGCACCTCGCTGCCAATAAGG
GTCATCTTTCTGTGGTGCAGATTTTGCTGAAGGCTGGCTGTGACCTCGATGTACAAGATGATGG
GGACCAGACAGCCTTGCACCGGGCCACTGTGGTGGGCAACACTGAGATCCTCACAGCGCTTATC
CGGGAGGGATGTGCCCTGGACAGACAGGACAAGGATGGGAATACGGCCCTGCATGAAGCCGCCT
GGCATGGATTCAGCCAGTCAGCCAAGCTGCTCGTTAAAGCCGGAGCCAACGTGCTTGCCAGAAA
CAAGGCAGGGAACACGGCTCTGCACCTGGCCTGCCAGAATAGTCACTCCCAGAGCACACGCGTC
CTCCTGCTGGGCGGCTCCCGGGCTGACCTCAAAAATAATGCAGGGGACACCTGCTTGCACGTGG
CTGCGCGCTATAACCACTTGTCCGTTGTTAGACTCCTCCTCAGTGCTTTCTGCTCTGTTCATGA
AAAGAACCAGGCTGGAGACACGGCCCTCCATGTGGCCGCTGCCCTAAATCACAAGAAGGTAGTT
AAAATCCTGCTGGAAGCCGGTGCTGACACGACCCTTGTGAACAATGCAGGGCAGACCCCACTGG
AGACCGCCCGCTACCACGACAATCCCGAAGTTGCTCTGCTCCTCACCAAGGCTCCCCAGATCTT
GCGCTTCAGTCGTGGGCGAAGCCTGAGGAAAAGGAGGGAGAGGCTCAAGGAAGAGAGGAGGGCT
CAGTCTGTGCCCAGAGATGAGGTGGCCCAGAGCAAGGGAAGCGTCTCAGCAGGAGACACCCCCA
GCAGTGAACAAGCTGTACCCGAAAAGGAAGAAGCTAGGAGAGATTGCCCACCAGCTTCCCAGGA
GCCAAGAAAGGATGAAAGGAGGAGAAAGTCAAGGCCAGAGGTGTCAGCACTATCTGACCCCACC
CCAGCAGCAGACCAACAACCTGGACACCAAAAGAACCTACATGGTCATCACCACCAAAAAAAGA
AGAGCAGACATCGATGCTGGTCCCCACCACCGCCCCACGGGTTCAGGGCGTACCAGCTCTACAC
GCTGTACCGTGGCGAGGACGGGAAAGTGATGCAGGCACCAATCAAAGGTTGTCGCTGTGAGCCT
CTGATCAACAAGCTGGAGAACCAGCTGGAGGCGGCTGTGGAGGAGTTAAGAGCTGAGCTGGGAA
CAGTGCAGGACAAAGTGAACACAAAGCTGGGCCACATGGAGAGCAAGAGCCAGCACCAAATGTG
CGTTTTGGACAAACTGATGGTGGAGCGGCTGTCAGCTGAGAGAACGGAATGTCTGAATCGCCTG
CAGCAGCATGCAGCTGCTGAGAAGCAGGAGGGAGAGAAACGTCAGATGTCATTGGTGGATGAAC
TGAAATCCTGGTGTATGTTGAAGATCCAGAATCTGGAGTTGAGACTTTCGGGAGAGTCTCGGAC
CTTTAGAGCTAAATCCACACCATCTCCCTCCGACTCCTCTCCAGCTGTAGACCAACCAGTGGTA
GCTGCAGGGCCGGGAGCAGCTTCCGACAGCTCCTCTCAGGTTGTGAGGCCCAAGGACAAGGCAC
TCAATGCCACTGCTGTCCCCAGACACCAGCAGGAGCTGCTTCCCTCTGATTGCACAGGCTCCGG
GTTAAGGAAGGTCAAGGCCCCGGCTGCTTCCAGACTGGGTGATCAGCAGACTGGGTCCTGTGTC
AACCGAGGCACTCAAACCAAGAAGTCTGCGAGAGGTGGGCAGACCAAGCATCGAGGCCAACAAC
CGACAGCCAGCAGCCCCAGTGGGCAGCAGCCATCCGCGGCAAGCAGTGACGCCCGAGATGCCTC
GCAAGCCCTGGAGCTAACCCAGTATTTTTTTGAGGCTGTTTCTGCTCAGATGGAAAAGTGGTAC
GAACGGAAAATTGAAGAAGCACGAAGCCAGGCCAGTCAGAAAGCTCAGCAAGATGAGGCCACAC
TGAAGGAGCACATCAGGAGTCTAGAAGAGGAGGTTGCCAAGCTGCGCACAAAGATGCACAAGTA
AAACCAGATTCTGAAGTGGACCCAGCAGGGTTTCCAGCTTGATAACAGCAAAGTAACTGTGTCC
CCGGAGTTGGTTGTCATGCACAAGGTGGATTTGCCTTTAATAGAGTCACTAATTGGTTGTGGAC
ACATACTTCGTGCTCTGAAGTTACAAGGCCTTCACTGGTTAAAATGAATCCTGGGAAGATGTCT
ATAAACAGCAAGACACCAAGAAGAGGAGGTGTGACCCACGTCTGTGATTCATGAAGTGTGTCAG
AAGCAAAGCAGAGAACTCTGGGAACCCAGTAGCCATTCACGTCCATGCCAACACACCTGCTGTG
CCTAGACGGTCCTTCTAGCAGAGCTGGGACTCAGATGCGGGAAGCCCTCTTTCTCCCATGTAAC
TCAAGATGCTCATCTTTTAAAGGGGTGAAACCCTTTCAGGTTGTGAGGATATACACTGTAATGA
CCTCAGTGTCCAGTGTGTCTTCAAGTAAGTTTAAGGATCATATAAAGGAGTAGCAATTGCTGAC
TGTCAAGTGAGAAGGGTTTAAACCATTGGTCAGTTACTGTGATTTTGGCCAAATAACTGAGCAG
ATTAATGGAAAAATATTCACCAAACAACTCCAGCCAGTTACCTTAGATTACCTTTCTAGAGTCA
AGACGTTTGTTCCATGTTTTGTAAAGAAATCAGGAAATATCACGAAAGTTTAATTTTGAATTGA
CTTCTCACTGAAGAACATCAAGCCGTCAAAAGGCGTTGCCTGTTTACTGAGTAAGATGTACCAG
ACTGAGGTGGTGACTCTATCTTGGTTGGGACCTTGGATTTGCCTAATCCTTTGGTACATGGAAC
ACGGATTATGTCTGTCTCCACATATGCATAGAAACGTATGTTTCTCTAAGCCTAAGGACCTAAT
AACTACTATCCATGAATTGTAACTAAAATGCTGTTCATTGAGCCAAAGAGAAGTGATCTTTGCG
GAATAGTATGCATTTATGCCTTGGTCAAGCCAAGTTCTTCCTTTTGCTTATAGTGACAATCCAC
GGATAGACATTCGTATAAACACGACAGGGCAGATATTGGGTATGCATCATCCAGTGAGCCCAAT
TATTTCCTGGGACCGACCTATCCTCAGCCTCTTGGGAGGTACAGCCCTTCCCCATTCTCCTTCA
CCGGAGTCCTGTCCTCAGCTCACTTGCACCTGAGCCCTGCTATGACACTACCCACAACAAAATG
TCACTCACTCCTGTAGGATCACTCCTTATTCATACAGCAAATTATTGGGAACTGCCTAATACTA
AGTAAGAGATGAAACCCCGAGTTCAGCATGAGTTATTTTCACTATTAGAATACTCATTACCTCA
AGAAACCCTTGACAAGAAGGGCAGAAATCAACTGTAACTGAACATCAAGTCTAGACCACAGAAT
ATCTTAGTGGCAGTGCTTTGATGATATCCTCCTACCTATGAGAAGCAGGCAGCTTATCACTGTG
AATGGATGTTTTTGTCAAGTCATTAAGCATAAAGACCAGGCTATTGTCTAAGGCCAGTCAGCCC
CTTACCCACAGGGTTGACTTCTGAGGAAGTGGTGGTTGGCTTGTTTTTGGAAGGCTTACCGTGT
ACTCTAGACTGGCTTTGGTCTCATGACCTTCCTGTCGCAGCCACCTGAGTTGGGACTAAAGGAG
TGAGCCCCATGGCCAATCATGTTTTGTTTGTAACACCAGTGTTAGGTTTGTGGCAATTGGTCCT
CAGCATTGTACAGCACTGAGGATCAGCTGTGTCTTTCCCCTCGTGCTGTGTGCAAAAAACAAAT
ATCCCAGCTGTACTTTTACAGATAACTGCTCATACCATACACTCTCACAATAGGTCATGTTTCA
AACCGAGGCCTAAAAAGTGTCAACAGCCGTGAAGAAACATGTTATAAAACAGTAGTGTTGCATA
TCAATGTCCTTTTTAAAAAACAGGTAATTGTTAGCACATCCCTTAGAGTGCATACTGAGCATCT
GTGCTGGGGTGAAAGTGTTAGTCTAGCATCACTTTTGATGTGGAGTCCAAAATACAGGTTTTTC
ATGTTTAGATTTGTGTGTGCAAGGCATGCTGTCTAATTTTTTTAGTCACCTTGAACTTGTGTCT
CCTATAAGCATTAAACGTTTGAGTTCTGTC

hide sequence

RefSeq Acc Id:

XM_006237978 ⟹ XP_006238040

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,999,225 - 52,139,409 (-)	NCBI
mRatBN7.2	5	47,202,872 - 47,343,085 (-)	NCBI
Rnor_6.0	5	48,052,610 - 48,167,568 (-)	NCBI
Rnor_5.0	5	52,640,128 - 52,778,289 (-)	NCBI

Sequence:

show sequence

CTGGCACTATATAGGGAGACCCTGTCTCTATACAGTAGCAGTAACAGCAGCGTGATTAGTGCCG
AGTACTGCTAGAGGCTGCACAGGAAGAGGCTCTCCCACAGAGGGCAGCTGAGAATATGCGCTGT
ACTTGGAGGCCCACTTACCAGTCTTTATCCAGGTTTTATATGGTTTCCTGTTGACAGCTGTTCT
ATAATATCTGTAGGGATTGTTTGCAGAGCAAGTGTGTTGGCTTAAGCTTACTGTGGTGGTTTAA
GCACTAAGCCTGCTCCCTGATGAAGTTTAGTAAAATCAATCCAAGCTAGCTTTGTACCCAAAAT
AGTTCTGGGGACAGTGTAAGGCCAGGCAGTTCTGAGTTTTTCACAGCACAGGTCAAGACACTCT
TTCCTGGGAGGGAGATTTTTGCCATCGTCTATCCCAGGATGGAGATAGCGTCCATCCATGTCCT
ATTCAGAAGACACTTTCTAGAGACTCCCTTCTGTCTTGTGCTTCCTAGGTCTAGACCAGCAGGG
GACCCTGTGAAACACTGTTGAAGCCCAGTTGACCACCAAACACTTTTAAGGGCCTGAAGATGGA
GTAGTAACAAAGGCATCCCCCATGATTCTCAGCACCCTTCCCTGTGGACTCCAGCCCCAGCCAG
AGGCTGCATGTGGAGCTGAAGAAACTGACCAGCTGCTTTCCTGAGAGCCCCTTTCTCTCCTAAT
TCATGAGCCAGCAGGATGCGGTCGCCGCGCTTTCAGAACGCCTGCTCATAGCTGCGTACAAAGG
CCAAACAGAGAATGTGGTTCAGCTCATCAACAAGGGTGCCAAGGTAGCGGTTACCAAGCATGGC
CGGACCCCCTTGCACCTCGCTGCCAATAAGGGTCATCTTTCTGTGGTGCAGATTTTGCTGAAGG
CTGGCTGTGACCTCGATGTACAAGATGATGGGGACCAGACAGCCTTGCACCGGGCCACTGTGGT
GGGCAACACTGAGATCCTCACAGCGCTTATCCGGGAGGGATGTGCCCTGGACAGACAGGACAAG
GATGGGAATACGGCCCTGCATGAAGCCGCCTGGCATGGATTCAGCCAGTCAGCCAAGCTGCTCG
TTAAAGCCGGAGCCAACGTGCTTGCCAGAAACAAGGCAGGGAACACGGCTCTGCACCTGGCCTG
CCAGAATAGTCACTCCCAGAGCACACGCGTCCTCCTGCTGGGCGGCTCCCGGGCTGACCTCAAA
AATAATGCAGGGGACACCTGCTTGCACGTGGCTGCGCGCTATAACCACTTGTCCGTTGTTAGAC
TCCTCCTCAGTGCTTTCTGCTCTGTTCATGAAAAGAACCAGGCTGGAGACACGGCCCTCCATGT
GGCCGCTGCCCTAAATCACAAGAAGGTAGTTAAAATCCTGCTGGAAGCCGGTGCTGACACGACC
CTTGTGAACAATGCAGGGCAGACCCCACTGGAGACCGCCCGCTACCACGACAATCCCGAAGTTG
CTCTGCTCCTCACCAAGGCTCCCCAGATCTTGCGCTTCAGTCGTGGGCGAAGCCTGAGGAAAAG
GAGGGAGAGGCTCAAGGAAGAGAGGAGGGCTCAGTCTGTGCCCAGAGATGAGGTGGCCCAGAGC
AAGGGAAGCGTCTCAGCAGGAGACACCCCCAGCAGTGAACAAGCTGTACCCGAAAAGGAAGAAG
CTAGGAGAGATTGCCCACCAGCTTCCCAGGAGCCAAGAAAGGATGAAAGGAGGAGAAAGTCAAG
GCCAGAGGTGTCAGCACTATCTGACCCCACCCCAGCAGCAGACCAACAACCTGGACACCAAAAG
AACCTACATGGTCATCACCACCAAAAAAAGAAGAGCAGACATCGATGCTGGTCCCCACCACCGC
CCCACGGGTTCAGGGCGTACCAGCTCTACACGCTGTACCGTGGCGAGGACGGGAAAGTGATGCA
GGCACCAATCAAAGGTTGTCGCTGTGAGCCTCTGATCAACAAGCTGGAGAACCAGCTGGAGGCG
GCTGTGGAGGAGTTAAGAGCTGAGCTGGGAACAGTGCAGGACAAAGTGAACACAAAGCTGGGCC
ACATGGAGAGCAAGAGCCAGCACCAAATGTGCGTTTTGGACAAACTGATGGTGGAGCGGCTGTC
AGCTGAGAGAACGGAATGTCTGAATCGCCTGCAGCAGCATGCAGCTGCTGAGAAGCAGGAGGGA
GAGAAACGTCAGATGTCATTGGTGGATGAACTGAAATCCTGGTGTATGTTGAAGATCCAGAATC
TGGAGTTGAGACTTTCGGGAGAGTCTCGGACCTTTAGAGCTAAATCCACACCATCTCCCTCCGA
CTCCTCTCCAGCTGTAGACCAACCAGTGGTAGCTGCAGGGCCGGGAGCAGCTTCCGACAGCTCC
TCTCAGGTTGTGAGGCCCAAGGACAAGGCACTCAATGCCACTGCTGTCCCCAGACACCAGCAGG
AGCTGCTTCCCTCTGATTGCACAGGCTCCGGGTTAAGGAAGGTCAAGGCCCCGGCTGCTTCCAG
ACTGGGTGATCAGCAGACTGGGTCCTGTGTCAACCGAGGCACTCAAACCAAGAAGTCTGCGAGA
GGTGGGCAGACCAAGCATCGAGGCCAACAACCGACAGCCAGCAGCCCCAGTGGGCAGCAGCCAT
CCGCGGCAAGCAGTGACGCCCGAGATGCCTCGCAAGCCCTGGAGCTAACCCAGTATTTTTTTGA
GGCTGTTTCTGCTCAGATGGAAAAGTGGTACGAACGGAAAATTGAAGAAGCACGAAGCCAGGCC
AGTCAGAAAGCTCAGCAAGATGAGGCCACACTGAAGGAGCACATCAGGAGTCTAGAAGAGGAGG
TTGCCAAGCTGCGCACAAAGATGCACAAGTAAAACCAGATTCTGAAGTGGACCCAGCAGGGTTT
CCAGCTTGATAACAGCAAAGTAACTGTGTCCCCGGAGTTGGTTGTCATGCACAAGGTGGATTTG
CCTTTAATAGAGTCACTAATTGGTTGTGGACACATACTTCGTGCTCTGAAGTTACAAGGCCTTC
ACTGGTTAAAATGAATCCTGGGAAGATGTCTATAAACAGCAAGACACCAAGAAGAGGAGGTGTG
ACCCACGTCTGTGATTCATGAAGTGTGTCAGAAGCAAAGCAGAGAACTCTGGGAACCCAGTAGC
CATTCACGTCCATGCCAACACACCTGCTGTGCCTAGACGGTCCTTCTAGCAGAGCTGGGACTCA
GATGCGGGAAGCCCTCTTTCTCCCATGTAACTCAAGATGCTCATCTTTTAAAGGGGTGAAACCC
TTTCAGGTTGTGAGGATATACACTGTAATGACCTCAGTGTCCAGTGTGTCTTCAAGTAAGTTTA
AGGATCATATAAAGGAGTAGCAATTGCTGACTGTCAAGTGAGAAGGGTTTAAACCATTGGTCAG
TTACTGTGATTTTGGCCAAATAACTGAGCAGATTAATGGAAAAATATTCACCAAACAACTCCAG
CCAGTTACCTTAGATTACCTTTCTAGAGTCAAGACGTTTGTTCCATGTTTTGTAAAGAAATCAG
GAAATATCACGAAAGTTTAATTTTGAATTGACTTCTCACTGAAGAACATCAAGCCGTCAAAAGG
CGTTGCCTGTTTACTGAGTAAGATGTACCAGACTGAGGTGGTGACTCTATCTTGGTTGGGACCT
TGGATTTGCCTAATCCTTTGGTACATGGAACACGGATTATGTCTGTCTCCACATATGCATAGAA
ACGTATGTTTCTCTAAGCCTAAGGACCTAATAACTACTATCCATGAATTGTAACTAAAATGCTG
TTCATTGAGCCAAAGAGAAGTGATCTTTGCGGAATAGTATGCATTTATGCCTTGGTCAAGCCAA
GTTCTTCCTTTTGCTTATAGTGACAATCCACGGATAGACATTCGTATAAACACGACAGGGCAGA
TATTGGGTATGCATCATCCAGTGAGCCCAATTATTTCCTGGGACCGACCTATCCTCAGCCTCTT
GGGAGGTACAGCCCTTCCCCATTCTCCTTCACCGGAGTCCTGTCCTCAGCTCACTTGCACCTGA
GCCCTGCTATGACACTACCCACAACAAAATGTCACTCACTCCTGTAGGATCACTCCTTATTCAT
ACAGCAAATTATTGGGAACTGCCTAATACTAAGTAAGAGATGAAACCCCGAGTTCAGCATGAGT
TATTTTCACTATTAGAATACTCATTACCTCAAGAAACCCTTGACAAGAAGGGCAGAAATCAACT
GTAACTGAACATCAAGTCTAGACCACAGAATATCTTAGTGGCAGTGCTTTGATGATATCCTCCT
ACCTATGAGAAGCAGGCAGCTTATCACTGTGAATGGATGTTTTTGTCAAGTCATTAAGCATAAA
GACCAGGCTATTGTCTAAGGCCAGTCAGCCCCTTACCCACAGGGTTGACTTCTGAGGAAGTGGT
GGTTGGCTTGTTTTTGGAAGGCTTACCGTGTACTCTAGACTGGCTTTGGTCTCATGACCTTCCT
GTCGCAGCCACCTGAGTTGGGACTAAAGGAGTGAGCCCCATGGCCAATCATGTTTTGTTTGTAA
CACCAGTGTTAGGTTTGTGGCAATTGGTCCTCAGCATTGTACAGCACTGAGGATCAGCTGTGTC
TTTCCCCTCGTGCTGTGTGCAAAAAACAAATATCCCAGCTGTACTTTTACAGATAACTGCTCAT
ACCATACACTCTCACAATAGGTCATGTTTCAAACCGAGGCCTAAAAAGTGTCAACAGCCGTGAA
GAAACATGTTATAAAACAGTAGTGTTGCATATCAATGTCCTTTTTAAAAAACAGGTAATTGTTA
GCACATCCCTTAGAGTGCATACTGAGCATCTGTGCTGGGGTGAAAGTGTTAGTCTAGCATCACT
TTTGATGTGGAGTCCAAAATACAGGTTTTTCATGTTTAGATTTGTGTGTGCAAGGCATGCTGTC
TAATTTTTTTAGTCACCTTGAACTTGTGTCTCCTATAAGCATTAAACGTTTGAGTTCTGTCGGT
ATCCTA

hide sequence

RefSeq Acc Id:

XM_017593571 ⟹ XP_017449060

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,999,225 - 52,139,462 (-)	NCBI
mRatBN7.2	5	47,202,872 - 47,343,129 (-)	NCBI
Rnor_6.0	5	48,052,610 - 48,108,391 (-)	NCBI

Sequence:

show sequence

GGGCCTGAAGATGGAGTAGTAACAAAGGCATCCCCCATGATTCTCAGCACCCTTCCCTGTGGAC
TCCAGCCCCAGCCAGAGGCTGCATGTGGAGCTGAAGAAACTGACCAGCTGCTTTCCTGAGAGCC
CCTTTCTCTCCTAATTCATGAGCCAGCAGGATGCGGTCGCCGCGCTTTCAGAACGCCTGCTCAT
AGCTGCGTACAAAGGCCAAACAGAGAATGTGGTTCAGCTCATCAACAAGGGTGCCAAGGTAGCG
GTTACCAAGCATGGCCGGACCCCCTTGCACCTCGCTGCCAATAAGGGTCATCTTTCTGTGGTGC
AGATTTTGCTGAAGGCTGGCTGTGACCTCGATGTACAAGATGATGGGGACCAGACAGCCTTGCA
CCGGGCCACTGTGGTGGGCAACACTGAGATCCTCACAGCGCTTATCCGGGAGGGATGTGCCCTG
GACAGACAGGACAAGGATGGGAATACGGCCCTGCATGAAGCCGCCTGGCATGGATTCAGCCAGT
CAGCCAAGCTGCTCGTTAAAGCCGGAGCCAACGTGCTTGCCAGAAACAAGGCAGGGAACACGGC
TCTGCACCTGGCCTGCCAGAATAGTCACTCCCAGAGCACACGCGTCCTCCTGCTGGGCGGCTCC
CGGGCTGACCTCAAAAATAATGCAGGGGACACCTGCTTGCACGTGGCTGCGCGCTATAACCACT
TGTCCGTTGTTAGACTCCTCCTCAGTGCTTTCTGCTCTGTTCATGAAAAGAACCAGGCTGGAGA
CACGGCCCTCCATGTGGCCGCTGCCCTAAATCACAAGAAGGTAGTTAAAATCCTGCTGGAAGCC
GGTGCTGACACGACCCTTGTGAACAATGCAGGGCAGACCCCACTGGAGACCGCCCGCTACCACG
ACAATCCCGAAGTTGCTCTGCTCCTCACCAAGGCTCCCCAGATCTTGCGCTTCAGTCGTGGGCG
AAGCCTGAGGAAAAGGAGGGAGAGGCTCAAGGAAGAGAGGAGGGCTCAGTCTGTGCCCAGAGAT
GAGGTGGCCCAGAGCAAGGGAAGCGTCTCAGCAGGAGACACCCCCAGCAGTGAACAAGCTGTAC
CCGAAAAGGAAGAAGCTAGGAGAGATTGCCCACCAGCTTCCCAGGAGCCAAGAAAGGATGAAAG
GAGGAGAAAGTCAAGGCCAGAGGTGTCAGCACTATCTGACCCCACCCCAGCAGCAGACCAACAA
CCTGGACACCAAAAGAACCTACATGGTCATCACCACCAAAAAAAGAAGAGCAGACATCGATGCT
GGTCCCCACCACCGCCCCACGGGTTCAGGGCGTACCAGCTCTACACGCTGTACCGTGGCGAGGA
CGGGAAAGTGATGCAGGCACCAATCAAAGGTTGTCGCTGTGAGCCTCTGATCAACAAGCTGGAG
AACCAGCTGGAGGCGGCTGTGGAGGAGTTAAGAGCTGAGCTGGGAACAGTGCAGGACAAAGTGA
ACACAAAGCTGGGCCACATGGAGAGCAAGAGCCAGCACCAAATGTGCGTTTTGGACAAACTGAT
GGTGGAGCGGCTGTCAGCTGAGAGAACGGAATGTCTGAATCGCCTGCAGCAGCATGCAGCTGCT
GAGAAGCAGGAGGGAGAGAAACGTCAGATGTCATTGGTGGATGAACTGAAATCCTGGTGTATGT
TGAAGATCCAGAATCTGGAGTTGAGACTTTCGGGAGAGTCTCGGACCTTTAGAGCTAAATCCAC
ACCATCTCCCTCCGACTCCTCTCCAGCTGTAGACCAACCAGTGGTAGCTGCAGGGCCGGGAGCA
GCTTCCGACAGCTCCTCTCAGGTTGTGAGGCCCAAGGACAAGGCACTCAATGCCACTGCTGTCC
CCAGACACCAGCAGGAGCTGCTTCCCTCTGATTGCACAGGCTCCGGGTTAAGGAAGGTCAAGGC
CCCGGCTGCTTCCAGACTGGGTGATCAGCAGACTGGGTCCTGTGTCAACCGAGGCACTCAAACC
AAGAAGTCTGCGAGAGGTGGGCAGACCAAGCATCGAGGCCAACAACCGACAGCCAGCAGCCCCA
GTGGGCAGCAGCCATCCGCGGCAAGCAGTGACGCCCGAGATGCCTCGCAAGCCCTGGAGCTAAC
CCAGTATTTTTTTGAGGCTGTTTCTGCTCAGATGGAAAAGTGGTACGAACGGAAAATTGAAGAA
GCACGAAGCCAGGCCAGTCAGAAAGCTCAGCAAGATGAGGCCACACTGAAGGAGCACATCAGGA
GTCTAGAAGAGGAGGTTGCCAAGCTGCGCACAAAGATGCACAAGTAAAACCAGATTCTGAAGTG
GACCCAGCAGGGTTTCCAGCTTGATAACAGCAAAGTAACTGTGTCCCCGGAGTTGGTTGTCATG
CACAAGGTGGATTTGCCTTTAATAGAGTCACTAATTGGTTGTGGACACATACTTCGTGCTCTGA
AGTTACAAGGCCTTCACTGGTTAAAATGAATCCTGGGAAGATGTCTATAAACAGCAAGACACCA
AGAAGAGGAGGTGTGACCCACGTCTGTGATTCATGAAGTGTGTCAGAAGCAAAGCAGAGAACTC
TGGGAACCCAGTAGCCATTCACGTCCATGCCAACACACCTGCTGTGCCTAGACGGTCCTTCTAG
CAGAGCTGGGACTCAGATGCGGGAAGCCCTCTTTCTCCCATGTAACTCAAGATGCTCATCTTTT
AAAGGGGTGAAACCCTTTCAGGTTGTGAGGATATACACTGTAATGACCTCAGTGTCCAGTGTGT
CTTCAAGTAAGTTTAAGGATCATATAAAGGAGTAGCAATTGCTGACTGTCAAGTGAGAAGGGTT
TAAACCATTGGTCAGTTACTGTGATTTTGGCCAAATAACTGAGCAGATTAATGGAAAAATATTC
ACCAAACAACTCCAGCCAGTTACCTTAGATTACCTTTCTAGAGTCAAGACGTTTGTTCCATGTT
TTGTAAAGAAATCAGGAAATATCACGAAAGTTTAATTTTGAATTGACTTCTCACTGAAGAACAT
CAAGCCGTCAAAAGGCGTTGCCTGTTTACTGAGTAAGATGTACCAGACTGAGGTGGTGACTCTA
TCTTGGTTGGGACCTTGGATTTGCCTAATCCTTTGGTACATGGAACACGGATTATGTCTGTCTC
CACATATGCATAGAAACGTATGTTTCTCTAAGCCTAAGGACCTAATAACTACTATCCATGAATT
GTAACTAAAATGCTGTTCATTGAGCCAAAGAGAAGTGATCTTTGCGGAATAGTATGCATTTATG
CCTTGGTCAAGCCAAGTTCTTCCTTTTGCTTATAGTGACAATCCACGGATAGACATTCGTATAA
ACACGACAGGGCAGATATTGGGTATGCATCATCCAGTGAGCCCAATTATTTCCTGGGACCGACC
TATCCTCAGCCTCTTGGGAGGTACAGCCCTTCCCCATTCTCCTTCACCGGAGTCCTGTCCTCAG
CTCACTTGCACCTGAGCCCTGCTATGACACTACCCACAACAAAATGTCACTCACTCCTGTAGGA
TCACTCCTTATTCATACAGCAAATTATTGGGAACTGCCTAATACTAAGTAAGAGATGAAACCCC
GAGTTCAGCATGAGTTATTTTCACTATTAGAATACTCATTACCTCAAGAAACCCTTGACAAGAA
GGGCAGAAATCAACTGTAACTGAACATCAAGTCTAGACCACAGAATATCTTAGTGGCAGTGCTT
TGATGATATCCTCCTACCTATGAGAAGCAGGCAGCTTATCACTGTGAATGGATGTTTTTGTCAA
GTCATTAAGCATAAAGACCAGGCTATTGTCTAAGGCCAGTCAGCCCCTTACCCACAGGGTTGAC
TTCTGAGGAAGTGGTGGTTGGCTTGTTTTTGGAAGGCTTACCGTGTACTCTAGACTGGCTTTGG
TCTCATGACCTTCCTGTCGCAGCCACCTGAGTTGGGACTAAAGGAGTGAGCCCCATGGCCAATC
ATGTTTTGTTTGTAACACCAGTGTTAGGTTTGTGGCAATTGGTCCTCAGCATTGTACAGCACTG
AGGATCAGCTGTGTCTTTCCCCTCGTGCTGTGTGCAAAAAACAAATATCCCAGCTGTACTTTTA
CAGATAACTGCTCATACCATACACTCTCACAATAGGTCATGTTTCAAACCGAGGCCTAAAAAGT
GTCAACAGCCGTGAAGAAACATGTTATAAAACAGTAGTGTTGCATATCAATGTCCTTTTTAAAA
AACAGGTAATTGTTAGCACATCCCTTAGAGTGCATACTGAGCATCTGTGCTGGGGTGAAAGTGT
TAGTCTAGCATCACTTTTGATGTGGAGTCCAAAATACAGGTTTTTCATGTTTAGATTTGTGTGT
GCAAGGCATGCTGTCTAATTTTTTTAGTCACCTTGAACTTGTGTCTCCTATAAGCATTAAACGT
TTGAGTTCTGTCGGTATCCTA

hide sequence

RefSeq Acc Id:

XM_039110547 ⟹ XP_038966475

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,999,225 - 52,059,220 (-)	NCBI
mRatBN7.2	5	47,202,872 - 47,263,015 (-)	NCBI

RefSeq Acc Id:

XM_039110548 ⟹ XP_038966476

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,999,225 - 52,139,447 (-)	NCBI
mRatBN7.2	5	47,202,872 - 47,343,103 (-)	NCBI

RefSeq Acc Id:

XM_039110549 ⟹ XP_038966477

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,999,225 - 52,080,063 (-)	NCBI
mRatBN7.2	5	47,202,872 - 47,278,589 (-)	NCBI

RefSeq Acc Id:

XM_039110550 ⟹ XP_038966478

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,999,225 - 52,139,623 (-)	NCBI
mRatBN7.2	5	47,202,872 - 47,343,183 (-)	NCBI

RefSeq Acc Id:

XM_063288208 ⟹ XP_063144278

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,999,225 - 52,059,220 (-)	NCBI

RefSeq Acc Id:

XM_063288209 ⟹ XP_063144279

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,999,225 - 52,059,220 (-)	NCBI

RefSeq Acc Id:

XM_063288211 ⟹ XP_063144281

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,999,225 - 52,059,220 (-)	NCBI

RefSeq Acc Id:

XM_063288212 ⟹ XP_063144282

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,999,225 - 52,059,220 (-)	NCBI

RefSeq Acc Id:

XM_063288213 ⟹ XP_063144283

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,999,225 - 52,059,220 (-)	NCBI

RefSeq Acc Id:

XM_063288214 ⟹ XP_063144284

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,999,225 - 52,057,368 (-)	NCBI

RefSeq Acc Id:

XM_063288215 ⟹ XP_063144285

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,999,225 - 52,059,220 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001128441	(Get FASTA)	NCBI Sequence Viewer
	NP_001425138	(Get FASTA)	NCBI Sequence Viewer
	XP_006238040	(Get FASTA)	NCBI Sequence Viewer
	XP_017449060	(Get FASTA)	NCBI Sequence Viewer
	XP_038966475	(Get FASTA)	NCBI Sequence Viewer
	XP_038966476	(Get FASTA)	NCBI Sequence Viewer
	XP_038966477	(Get FASTA)	NCBI Sequence Viewer
	XP_038966478	(Get FASTA)	NCBI Sequence Viewer
	XP_063144278	(Get FASTA)	NCBI Sequence Viewer
	XP_063144279	(Get FASTA)	NCBI Sequence Viewer
	XP_063144281	(Get FASTA)	NCBI Sequence Viewer
	XP_063144282	(Get FASTA)	NCBI Sequence Viewer
	XP_063144283	(Get FASTA)	NCBI Sequence Viewer
	XP_063144284	(Get FASTA)	NCBI Sequence Viewer
	XP_063144285	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI68675	(Get FASTA)	NCBI Sequence Viewer
	EDL98570	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000061313
	ENSRNOP00000061313.1
	ENSRNOP00000069829.2
	ENSRNOP00000074598
	ENSRNOP00000074598.3
	ENSRNOP00000089036.1
	ENSRNOP00000098716
	ENSRNOP00000098716.1
	ENSRNOP00000102555.1
	ENSRNOP00000105781
	ENSRNOP00000105781.1
	ENSRNOP00000105814
	ENSRNOP00000105814.1
	ENSRNOP00000106482
	ENSRNOP00000106482.1

RefSeq Acc Id:

NP_001128441 ⟸ NM_001134969

- UniProtKB:

B5DEH9 (UniProtKB/TrEMBL), F7FKY4 (UniProtKB/TrEMBL), A0A0G2K8G5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSQQDAVAALSERLLIAAYKGQTENVVQLINKGAKVAVTKHGRTPLHLAANKGHLSVVQILLKA
GCDLDVQDDGDQTALHRATVVGNTEILTALIREGCALDRQDKDGNTALHEAAWHGFSQSAKLLV
KAGANVLARNKAGNTALHLACQNSHSQSTRVLLLGGSRADLKNNAGDTCLHVAARYNHLSVVRL
LLSAFCSVHEKNQAGDTALHVAAALNHKKVVKILLEAGADTTLVNNAGQTPLETARYHDNPEVA
LLLTKAPQILRFSRGRSLRKRRERLKEERRAQSVPRDEVAQSKGSVSAGDTPSSEQAVPEKEEA
RRDCPPASQEPRKDERRRKSRPEVSALSDPTPAADQQPGHQKNLHGHHHQKKKSRHRCWSPPPP
HGFRAYQLYTLYRGEDGKVMQAPIKGCRCEPLINKLENQLEAAVEELRAELGTVQDKVNTKLGH
MESKSQHQMCVLDKLMVERLSAERTECLNRLQQHAAAEKQEGEKRQMSLVDELKSWCMLKIQNL
ELRLSGESRTFRAKSTPSPSDSSPAVDQPVVAAGPGAASDSSSQVVRPKDKALNATAVPRHQQE
LLPSDCTGSGLRKVKAPAASRLGDQQTGSCVNRGTQTKKSARGGQTKHRGQQPTASSPSGQQPS
AASSDARDASQALELTQYFFEAVSAQMEKWYERKIEEARSQASQKAQQDEATLKEHIRSLEEEV
AKLRTKMHK

hide sequence

RefSeq Acc Id:	XP_006238040 ⟸ XM_006237978
- Peptide Label:	isoform X1
- UniProtKB:	B5DEH9 (UniProtKB/TrEMBL), F7FKY4 (UniProtKB/TrEMBL), A0A0G2K8G5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSQQDAVAALSERLLIAAYKGQTENVVQLINKGAKVAVTKHGRTPLHLAANKGHLSVVQILLKA GCDLDVQDDGDQTALHRATVVGNTEILTALIREGCALDRQDKDGNTALHEAAWHGFSQSAKLLV KAGANVLARNKAGNTALHLACQNSHSQSTRVLLLGGSRADLKNNAGDTCLHVAARYNHLSVVRL LLSAFCSVHEKNQAGDTALHVAAALNHKKVVKILLEAGADTTLVNNAGQTPLETARYHDNPEVA LLLTKAPQILRFSRGRSLRKRRERLKEERRAQSVPRDEVAQSKGSVSAGDTPSSEQAVPEKEEA RRDCPPASQEPRKDERRRKSRPEVSALSDPTPAADQQPGHQKNLHGHHHQKKKSRHRCWSPPPP HGFRAYQLYTLYRGEDGKVMQAPIKGCRCEPLINKLENQLEAAVEELRAELGTVQDKVNTKLGH MESKSQHQMCVLDKLMVERLSAERTECLNRLQQHAAAEKQEGEKRQMSLVDELKSWCMLKIQNL ELRLSGESRTFRAKSTPSPSDSSPAVDQPVVAAGPGAASDSSSQVVRPKDKALNATAVPRHQQE LLPSDCTGSGLRKVKAPAASRLGDQQTGSCVNRGTQTKKSARGGQTKHRGQQPTASSPSGQQPS AASSDARDASQALELTQYFFEAVSAQMEKWYERKIEEARSQASQKAQQDEATLKEHIRSLEEEV AKLRTKMHK hide sequence

RefSeq Acc Id:

XP_017449060 ⟸ XM_017593571

- Peptide Label:

isoform X1

- Sequence:

show sequence

MSQQDAVAALSERLLIAAYKGQTENVVQLINKGAKVAVTKHGRTPLHLAANKGHLSVVQILLKA
GCDLDVQDDGDQTALHRATVVGNTEILTALIREGCALDRQDKDGNTALHEAAWHGFSQSAKLLV
KAGANVLARNKAGNTALHLACQNSHSQSTRVLLLGGSRADLKNNAGDTCLHVAARYNHLSVVRL
LLSAFCSVHEKNQAGDTALHVAAALNHKKVVKILLEAGADTTLVNNAGQTPLETARYHDNPEVA
LLLTKAPQILRFSRGRSLRKRRERLKEERRAQSVPRDEVAQSKGSVSAGDTPSSEQAVPEKEEA
RRDCPPASQEPRKDERRRKSRPEVSALSDPTPAADQQPGHQKNLHGHHHQKKKSRHRCWSPPPP
HGFRAYQLYTLYRGEDGKVMQAPIKGCRCEPLINKLENQLEAAVEELRAELGTVQDKVNTKLGH
MESKSQHQMCVLDKLMVERLSAERTECLNRLQQHAAAEKQEGEKRQMSLVDELKSWCMLKIQNL
ELRLSGESRTFRAKSTPSPSDSSPAVDQPVVAAGPGAASDSSSQVVRPKDKALNATAVPRHQQE
LLPSDCTGSGLRKVKAPAASRLGDQQTGSCVNRGTQTKKSARGGQTKHRGQQPTASSPSGQQPS
AASSDARDASQALELTQYFFEAVSAQMEKWYERKIEEARSQASQKAQQDEATLKEHIRSLEEEV
AKLRTKMHK

hide sequence

Ensembl Acc Id:

ENSRNOP00000061313 ⟸ ENSRNOT00000065912

Ensembl Acc Id:

ENSRNOP00000069829 ⟸ ENSRNOT00000081748

Ensembl Acc Id:

ENSRNOP00000074598 ⟸ ENSRNOT00000088179

RefSeq Acc Id:	XP_038966478 ⟸ XM_039110550
- Peptide Label:	isoform X1
- UniProtKB:	B5DEH9 (UniProtKB/TrEMBL), F7FKY4 (UniProtKB/TrEMBL), A0A0G2K8G5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038966476 ⟸ XM_039110548
- Peptide Label:	isoform X1
- UniProtKB:	B5DEH9 (UniProtKB/TrEMBL), F7FKY4 (UniProtKB/TrEMBL), A0A0G2K8G5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038966477 ⟸ XM_039110549
- Peptide Label:	isoform X1
- UniProtKB:	B5DEH9 (UniProtKB/TrEMBL), F7FKY4 (UniProtKB/TrEMBL), A0A0G2K8G5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038966475 ⟸ XM_039110547
- Peptide Label:	isoform X1
- UniProtKB:	B5DEH9 (UniProtKB/TrEMBL), F7FKY4 (UniProtKB/TrEMBL), A0A0G2K8G5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000089036 ⟸ ENSRNOT00000097606

RefSeq Acc Id:	XP_063144283 ⟸ XM_063288213
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6A8Z9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144278 ⟸ XM_063288208
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6A8Z9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144282 ⟸ XM_063288212
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6A8Z9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144279 ⟸ XM_063288209
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A8Z9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144281 ⟸ XM_063288211
- Peptide Label:	isoform X4
- UniProtKB:	A0A0G2JWC8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144285 ⟸ XM_063288215
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063144284 ⟸ XM_063288214
- Peptide Label:	isoform X7

Ensembl Acc Id:

ENSRNOP00000105814 ⟸ ENSRNOT00000128239

Ensembl Acc Id:

ENSRNOP00000105781 ⟸ ENSRNOT00000164914

Ensembl Acc Id:

ENSRNOP00000102555 ⟸ ENSRNOT00000151182

Ensembl Acc Id:

ENSRNOP00000106482 ⟸ ENSRNOT00000173159

Ensembl Acc Id:

ENSRNOP00000098716 ⟸ ENSRNOT00000137740

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B5DEH9-F1-model_v2	AlphaFold	B5DEH9	1-713	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1583731	AgrOrtholog
BioCyc Gene	G2FUF-41715	BioCyc
Ensembl Genes	ENSRNOG00000007110	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000065912	ENTREZGENE
	ENSRNOT00000065912.4	UniProtKB/TrEMBL
	ENSRNOT00000081748.3	UniProtKB/TrEMBL
	ENSRNOT00000088179	ENTREZGENE
	ENSRNOT00000088179.3	UniProtKB/TrEMBL
	ENSRNOT00000097606.2	UniProtKB/TrEMBL
	ENSRNOT00000128239	ENTREZGENE
	ENSRNOT00000128239.1	UniProtKB/TrEMBL
	ENSRNOT00000137740	ENTREZGENE
	ENSRNOT00000137740.1	UniProtKB/TrEMBL
	ENSRNOT00000151182.1	UniProtKB/TrEMBL
	ENSRNOT00000164914	ENTREZGENE
	ENSRNOT00000164914.1	UniProtKB/TrEMBL
	ENSRNOT00000173159	ENTREZGENE
	ENSRNOT00000173159.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.20	UniProtKB/TrEMBL
InterPro	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
KEGG Report	rno:500430	UniProtKB/TrEMBL
NCBI Gene	500430	ENTREZGENE
PANTHER	ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	ANKYRIN REPEAT-CONTAINING PROTEIN-RELATED	UniProtKB/TrEMBL
	ANKYRIN-3	UniProtKB/TrEMBL
Pfam	Ank	UniProtKB/TrEMBL
	Ank_2	UniProtKB/TrEMBL
	Ank_4	UniProtKB/TrEMBL
PhenoGen	Ankrd6	PhenoGen
PRINTS	ANKYRIN	UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000007110	RatGTEx
SMART	ANK	UniProtKB/TrEMBL
Superfamily-SCOP	ANK	UniProtKB/TrEMBL
UniProt	A0A0G2JWC8	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2K8G5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A8Z9	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0KWF8_RAT	UniProtKB/TrEMBL
	A0ABK0LHY9_RAT	UniProtKB/TrEMBL
	A0ABK0LLN2_RAT	UniProtKB/TrEMBL
	A0ABK0LMP1_RAT	UniProtKB/TrEMBL
	A0ABK0LRC2_RAT	UniProtKB/TrEMBL
	B5DEH9	ENTREZGENE, UniProtKB/TrEMBL
	F7FKY4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-05	Ankrd6	ankyrin repeat domain 6	LOC500430	similar to ankyrin repeat domain 6	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-11-19	LOC500430	similar to ankyrin repeat domain 6			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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