Acp1l2 (acid phosphatase 1 like 2) - Rat Genome Database

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Gene: Acp1l2 (acid phosphatase 1 like 2) Rattus norvegicus
Analyze
Symbol: Acp1l2
Name: acid phosphatase 1 like 2
RGD ID: 1582722
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC691592; low molecular weight phosphotyrosine protein phosphatase-like; similar to acid phosphatase 1; similar to acid phosphatase 1 isoform b
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8179,989,963 - 79,990,394 (-)NCBIGRCr8GRCr8GRCr8
mRatBN7.2170,917,764 - 70,918,195 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0174,660,090 - 74,660,521 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0173,896,987 - 73,897,477 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4170,382,723 - 70,383,199 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera166,215,091 - 66,215,522 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse:




References

Genomics

Variants

.
Variants in Acp1l2
3 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331732Srn4Serum renin concentration QTL 44.467renin activity (VT:0005581)plasma renin activity level (CMO:0000116)14345783787558729Rat
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)151940904101229020Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)139728272132889942Rat
4889929Bss87Bone structure and strength QTL 876.7tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)14630261591302615Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)151941022208479811Rat
1331792Rf29Renal function QTL 294.589urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)14345783787558729Rat
2313062Bmd73Bone mineral density QTL 733.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)14630261591302615Rat
8552900Pigfal1Plasma insulin-like growth factor 1 level QTL 17.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)14350995288509952Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)151940904168768703Rat
1354643Foco2Food consumption QTL 27.170.0001eating behavior trait (VT:0001431)food intake rate (CMO:0000427)14212296887122968Rat
2313065Bss67Bone structure and strength QTL 673.10.0001tibia area (VT:1000281)tibia total energy absorbed before break (CMO:0001736)14630261591302615Rat
2313069Bss68Bone structure and strength QTL 682.90.0001tibia size trait (VT:0100001)tibia total energy absorbed before break (CMO:0001736)14630261591302615Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)166404680111404680Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134184556172281316Rat
2313075Bss66Bone structure and strength QTL 663.40.0001tibia length (VT:0004357)tibia length (CMO:0000450)14630261591302615Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)166009857160501508Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134565911208798288Rat
1331778Rf28Renal function QTL 284.66urine potassium amount (VT:0010539)urine potassium excretion rate (CMO:0000761)14345783787558729Rat
2313077Bss69Bone structure and strength QTL 693.50.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)14630261591302615Rat
1302788Scl19Serum cholesterol QTL 194.60.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)166400974132889942Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)151511344153680016Rat
1331785Rf27Renal function QTL 274.643urine sodium amount (VT:0006274)urine sodium level (CMO:0000129)13070837587558729Rat
61342Bp27Blood pressure QTL 273.40.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16540563796805205Rat
4889962Bss94Bone structure and strength QTL 943.8tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)15190920691302615Rat
6903308Scl36Serum cholesterol QTL 3620.0125blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)158769992103769992Rat
2313092Bmd72Bone mineral density QTL 722.50.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)14630261591302615Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)166077886111077886Rat
2313097Bss70Bone structure and strength QTL 703.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)14630261591302615Rat
9589820Insglur3Insulin/glucose ratio QTL 310.750.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)14350995288509952Rat
152025249Scl82Serum cholesterol level QTL 824.77blood cholesterol amount (VT:0000180)152891222109116986Rat
1354599Bw29Body weight QTL 293.460.001body mass (VT:0001259)body weight (CMO:0000012)14212296887122968Rat
4889919Bss86Bone structure and strength QTL 864.1tibia area (VT:1000281)tibia midshaft total cross-sectional area (CMO:0001715)14630261591302615Rat
8552948Pigfal11Plasma insulin-like growth factor 1 level QTL 114.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)14350995288509952Rat


Expression

RNA-SEQ Expression

hemolymphoid system
mesenchyme
mesoderm
renal system
6 8 6 2

Sequence


RefSeq Acc Id: XM_017590554   ⟹   XP_017446043
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,989,963 - 79,990,394 (-)NCBI
mRatBN7.2170,917,764 - 70,918,195 (-)NCBI
Rnor_6.0174,660,090 - 74,660,521 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017590555   ⟹   XP_017446044
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,989,963 - 79,990,394 (-)NCBI
mRatBN7.2170,917,764 - 70,918,195 (-)NCBI
Rnor_6.0174,660,090 - 74,660,521 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_017446043 (Get FASTA)   NCBI Sequence Viewer  
  XP_017446044 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_017446044   ⟸   XM_017590555
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017446043   ⟸   XM_017590554
- Peptide Label: isoform X1
- Sequence:


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-60801 BioCyc
NCBI Gene 691592 ENTREZGENE
PhenoGen Acp1l2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 Acp1l2  acid phosphatase 1 like 2  LOC691592  similar to acid phosphatase 1 isoform b  Symbol and Name Changed 1299863 APPROVED
2006-11-19 LOC691592  similar to acid phosphatase 1 isoform b      Symbol and Name status set to provisional 70820 PROVISIONAL