Neto1 (neuropilin and tolloid like 1) - Rat Genome Database

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Gene: Neto1 (neuropilin and tolloid like 1) Rattus norvegicus
Analyze
Symbol: Neto1
Name: neuropilin and tolloid like 1
RGD ID: 1566269
Description: Predicted to enable ionotropic glutamate receptor binding activity. Predicted to be involved in learning or memory; modulation of chemical synaptic transmission; and protein localization to synapse. Predicted to act upstream of or within receptor localization to synapse. Predicted to be located in excitatory synapse. Predicted to be active in Schaffer collateral - CA1 synapse; glutamatergic synapse; and postsynaptic density membrane. Orthologous to human NETO1 (neuropilin and tolloid like 1); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC307206; neuropilin (NRP) and tolloid (TLL)-like 1; neuropilin and tolloid-like protein 1; RGD1566269; similar to Neuropilin- and tolloid-like protein 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81881,905,455 - 82,028,730 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1881,910,355 - 82,024,505 (+)EnsemblGRCr8
mRatBN7.21879,635,633 - 79,753,913 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1879,635,633 - 79,749,030 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1881,744,847 - 81,859,798 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01882,416,897 - 82,531,858 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01880,252,532 - 80,367,485 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01883,471,342 - 83,585,043 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1883,471,342 - 83,584,357 (+)Ensemblrn6Rnor6.0
Rnor_5.01882,532,693 - 82,646,402 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41882,888,369 - 83,107,662 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1878,220,855 - 78,334,439 (+)NCBICelera
Cytogenetic Map18q12.3NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:19243221   PMID:21734292   PMID:23621516   PMID:26277340   PMID:30421168  


Genomics

Comparative Map Data
Neto1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81881,905,455 - 82,028,730 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1881,910,355 - 82,024,505 (+)EnsemblGRCr8
mRatBN7.21879,635,633 - 79,753,913 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1879,635,633 - 79,749,030 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1881,744,847 - 81,859,798 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01882,416,897 - 82,531,858 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01880,252,532 - 80,367,485 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01883,471,342 - 83,585,043 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1883,471,342 - 83,584,357 (+)Ensemblrn6Rnor6.0
Rnor_5.01882,532,693 - 82,646,402 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41882,888,369 - 83,107,662 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1878,220,855 - 78,334,439 (+)NCBICelera
Cytogenetic Map18q12.3NCBI
NETO1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381872,742,314 - 72,867,987 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1872,742,314 - 72,868,146 (-)Ensemblhg38GRCh38
GRCh371870,409,549 - 70,535,222 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361868,565,767 - 68,685,790 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341868,565,766 - 68,683,914NCBI
Celera1867,266,714 - 67,386,741 (-)NCBICelera
Cytogenetic Map18q22.3NCBI
HuRef1867,129,054 - 67,254,266 (-)NCBIHuRef
CHM1_11870,404,789 - 70,530,029 (-)NCBICHM1_1
T2T-CHM13v2.01872,963,774 - 73,089,445 (-)NCBIT2T-CHM13v2.0
Neto1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391886,411,110 - 86,524,482 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1886,413,077 - 86,524,843 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381886,394,815 - 86,506,721 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1886,394,952 - 86,506,718 (+)Ensemblmm10GRCm38
MGSCv371886,564,344 - 86,671,289 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361886,529,145 - 86,635,466 (+)NCBIMGSCv36mm8
Celera1887,432,805 - 87,540,028 (+)NCBICelera
Cytogenetic Map18E4NCBI
cM Map1858.47NCBI
Neto1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540256,262,137 - 56,376,142 (-)Ensembl
ChiLan1.0NW_00495540256,262,137 - 56,376,105 (-)NCBIChiLan1.0ChiLan1.0
NETO1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21790,262,474 - 90,387,572 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11875,955,097 - 76,080,195 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01866,114,425 - 66,240,141 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11869,402,193 - 69,527,333 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1869,408,116 - 69,527,333 (-)EnsemblpanPan2panpan1.1
NETO1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.116,114,152 - 6,242,178 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl16,114,067 - 6,225,821 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha17,125,478 - 7,252,116 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.015,929,615 - 6,056,608 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl15,929,703 - 6,044,453 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.115,967,271 - 6,093,806 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.015,921,208 - 6,048,154 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.016,139,656 - 6,266,730 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Neto1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494419,972,680 - 20,078,513 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936756296,578 - 401,823 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936756296,584 - 403,830 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NETO1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1150,711,628 - 150,817,437 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11150,711,486 - 150,821,626 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21167,021,548 - 167,061,940 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NETO1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1186,956,629 - 7,082,135 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl186,957,091 - 7,076,892 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606018,776,177 - 18,902,102 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Neto1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248068,014,353 - 8,127,078 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248068,013,955 - 8,128,867 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Neto1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11546,096,223 - 46,204,829 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Neto1
809 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:151
Count of miRNA genes:102
Interacting mature miRNAs:134
Transcripts:ENSRNOT00000019384
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182507112683910656Rat
2303584Gluco55Glucose level QTL 552blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)185079521286134022Rat
9589041Epfw12Epididymal fat weight QTL 1217.080.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)184891573786134022Rat
8694432Bw165Body weight QTL 1653.810.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)184891573786134022Rat
1358193Emca2Estrogen-induced mammary cancer QTL 21.6mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)186584644786134022Rat
1331730Scl27Serum cholesterol level QTL 273.826blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)185449080186134022Rat
1598832Glom11Glomerulus QTL 112.9kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)185326667186134022Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182349405785487725Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181955353285493247Rat
1331770Bp234Blood pressure QTL 2343.807arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184562030686134022Rat
2303571Bw92Body weight QTL 923body mass (VT:0001259)body weight (CMO:0000012)185079521286134022Rat
2303120Mamtr8Mammary tumor resistance QTL 80.001mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)183161050585493247Rat
738008Hcar14Hepatocarcinoma resistance QTL 144.3liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion number (CMO:0001462)185782524385493247Rat
631834Sach3Saccharin preference QTL 33.90.01consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)183857591983575919Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181206648285493247Rat
724542Kidm2Kidney mass QTL 22.6kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)186144685386134022Rat
61367Iddm4Insulin dependent diabetes mellitus QTL 42.330.0074blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)184046238385462383Rat
6893683Bw110Body weight QTL 1102.70.002body mass (VT:0001259)body weight (CMO:0000012)184562030686134022Rat
8694366Abfw8Abdominal fat weight QTL 86.380.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)184891573786134022Rat
70172Eae15Experimental allergic encephalomyelitis QTL 150.001nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)187948431184129249Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181206648285493247Rat
1331754Bp230Blood pressure QTL 2304.61609arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181564228086134022Rat
7794793Mcs34Mammary carcinoma susceptibility QTL 341.54mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)186563556785897775Rat

Markers in Region
D18Mit6  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81881,806,709 - 81,806,852 (+)Marker Load Pipeline
mRatBN7.21879,531,886 - 79,532,029 (+)MAPPERmRatBN7.2
Rnor_6.01883,366,257 - 83,366,399NCBIRnor6.0
Rnor_5.01882,427,608 - 82,427,750UniSTSRnor5.0
RGSC_v3.41882,920,379 - 82,920,522RGDRGSC3.4
RGSC_v3.41882,920,380 - 82,920,522UniSTSRGSC3.4
Celera1878,116,960 - 78,117,102UniSTS
RGSC_v3.11882,993,830 - 82,993,972RGD
RH 3.4 Map18768.3RGD
RH 3.4 Map18768.3UniSTS
SHRSP x BN Map1851.2799UniSTS
SHRSP x BN Map1851.2799RGD
Cytogenetic Map18q13UniSTS
D18Got77  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21879,683,569 - 79,683,854 (+)MAPPERmRatBN7.2
Rnor_6.01883,518,834 - 83,519,118NCBIRnor6.0
Rnor_5.01882,580,185 - 82,580,469UniSTSRnor5.0
RGSC_v3.41883,042,103 - 83,042,388RGDRGSC3.4
RGSC_v3.41883,042,104 - 83,042,388UniSTSRGSC3.4
Celera1878,269,014 - 78,269,298UniSTS
RGSC_v3.11883,115,554 - 83,115,838RGD
RH 3.4 Map18768.2RGD
RH 3.4 Map18768.2UniSTS
Cytogenetic Map18q13UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
9 7 53 142 58 62 37 46 37 6 219 118 6 131 48 82 25 16 16

Sequence


Ensembl Acc Id: ENSRNOT00000019384   ⟹   ENSRNOP00000019384
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1881,910,355 - 82,024,505 (+)Ensembl
mRatBN7.2 Ensembl1879,635,633 - 79,749,030 (+)Ensembl
Rnor_6.0 Ensembl1883,471,342 - 83,584,357 (+)Ensembl
RefSeq Acc Id: NM_001107371   ⟹   NP_001100841
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81881,910,453 - 82,023,847 (+)NCBI
mRatBN7.21879,635,633 - 79,749,030 (+)NCBI
Rnor_6.01883,471,342 - 83,584,357 (+)NCBI
Rnor_5.01882,532,693 - 82,646,402 (+)NCBI
RGSC_v3.41882,888,369 - 83,107,662 (+)RGD
Celera1878,220,855 - 78,334,439 (+)RGD
Sequence:
RefSeq Acc Id: XM_006255035   ⟹   XP_006255097
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81881,905,455 - 82,028,730 (+)NCBI
mRatBN7.21879,636,453 - 79,753,913 (+)NCBI
Rnor_6.01883,472,212 - 83,585,043 (+)NCBI
Rnor_5.01882,532,693 - 82,646,402 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008772133   ⟹   XP_008770355
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81881,905,455 - 81,987,177 (+)NCBI
mRatBN7.21879,636,453 - 79,712,356 (+)NCBI
Rnor_6.01883,472,212 - 83,548,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039096765   ⟹   XP_038952693
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81881,905,455 - 82,028,730 (+)NCBI
mRatBN7.21879,636,453 - 79,753,913 (+)NCBI
RefSeq Acc Id: XM_039096766   ⟹   XP_038952694
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81881,905,455 - 82,028,730 (+)NCBI
mRatBN7.21879,636,453 - 79,753,913 (+)NCBI
RefSeq Acc Id: XM_039096767   ⟹   XP_038952695
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81881,919,787 - 82,028,730 (+)NCBI
mRatBN7.21879,644,967 - 79,753,913 (+)NCBI
RefSeq Acc Id: XM_039096768   ⟹   XP_038952696
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81881,919,692 - 82,028,730 (+)NCBI
mRatBN7.21879,644,863 - 79,753,913 (+)NCBI
RefSeq Acc Id: XM_039096769   ⟹   XP_038952697
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81881,905,455 - 81,996,287 (+)NCBI
mRatBN7.21879,636,453 - 79,721,472 (+)NCBI
RefSeq Acc Id: XM_063277287   ⟹   XP_063133357
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81881,905,455 - 82,028,730 (+)NCBI
RefSeq Acc Id: XM_063277288   ⟹   XP_063133358
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81881,905,455 - 82,016,979 (+)NCBI
RefSeq Acc Id: XR_005496025
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81881,905,455 - 81,996,136 (+)NCBI
mRatBN7.21879,636,453 - 79,721,319 (+)NCBI
RefSeq Acc Id: NP_001100841   ⟸   NM_001107371
- Peptide Label: precursor
- UniProtKB: D4AAD6 (UniProtKB/TrEMBL),   A6K5M8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006255097   ⟸   XM_006255035
- Peptide Label: isoform X1
- UniProtKB: D4AAD6 (UniProtKB/TrEMBL),   A6K5M8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008770355   ⟸   XM_008772133
- Peptide Label: isoform X6
- Sequence:
Ensembl Acc Id: ENSRNOP00000019384   ⟸   ENSRNOT00000019384
RefSeq Acc Id: XP_038952693   ⟸   XM_039096765
- Peptide Label: isoform X1
- UniProtKB: D4AAD6 (UniProtKB/TrEMBL),   A6K5M8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038952694   ⟸   XM_039096766
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038952697   ⟸   XM_039096769
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038952696   ⟸   XM_039096768
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038952695   ⟸   XM_039096767
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063133357   ⟸   XM_063277287
- Peptide Label: isoform X1
- UniProtKB: A6K5M8 (UniProtKB/TrEMBL),   D4AAD6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133358   ⟸   XM_063277288
- Peptide Label: isoform X5
Protein Domains
CUB

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4AAD6-F1-model_v2 AlphaFold D4AAD6 1-533 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1566269 AgrOrtholog
BioCyc Gene G2FUF-6735 BioCyc
Ensembl Genes ENSRNOG00000014006 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000019384 ENTREZGENE
  ENSRNOT00000019384.6 UniProtKB/TrEMBL
Gene3D-CATH 2.40.128.620 UniProtKB/TrEMBL
  2.60.120.290 UniProtKB/TrEMBL
InterPro CUB UniProtKB/TrEMBL
  LDL_receptor-like_sf UniProtKB/TrEMBL
  LDLR_class-A_CS UniProtKB/TrEMBL
  LDLR_classA_rpt UniProtKB/TrEMBL
  sperma_CUB_dom UniProtKB/TrEMBL
KEGG Report rno:307206 UniProtKB/TrEMBL
NCBI Gene 307206 ENTREZGENE
PANTHER NEUROPILIN AND TOLLOID-LIKE PROTEIN 1 UniProtKB/TrEMBL
  OVOCHYMASE-RELATED UniProtKB/TrEMBL
Pfam CUB UniProtKB/TrEMBL
  Ldl_recept_a UniProtKB/TrEMBL
PhenoGen Neto1 PhenoGen
PROSITE CUB UniProtKB/TrEMBL
  LDLRA_1 UniProtKB/TrEMBL
  LDLRA_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000014006 RatGTEx
SMART CUB UniProtKB/TrEMBL
  LDLa UniProtKB/TrEMBL
Superfamily-SCOP CUB UniProtKB/TrEMBL
  LDL_rcpt_classA_cys-rich UniProtKB/TrEMBL
UniProt A6K5M8 ENTREZGENE, UniProtKB/TrEMBL
  D4AAD6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-10 Neto1  neuropilin and tolloid like 1  Neto1  neuropilin (NRP) and tolloid (TLL)-like 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-07 Neto1  neuropilin (NRP) and tolloid (TLL)-like 1  RGD1566269_predicted  similar to Neuropilin- and tolloid-like protein 1 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1566269_predicted  similar to Neuropilin- and tolloid-like protein 1 (predicted)  LOC307206  similar to Neuropilin- and tolloid-like protein 1  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC307206  similar to Neuropilin- and tolloid-like protein 1      Symbol and Name status set to provisional 70820 PROVISIONAL