Advanced Search (OLGA)

Gene: Stap2 (signal transducing adaptor family member 2) Rattus norvegicus

Analyze

Symbol:

Stap2

Name:

signal transducing adaptor family member 2

RGD ID:

1566020

Description:

Predicted to enable signaling adaptor activity. Predicted to be located in plasma membrane. Orthologous to human STAP2 (signal transducing adaptor family member 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

MGC108972; signal-transducing adaptor protein 2; signal-transducing adaptor protein-2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	915,546 - 924,604 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	915,550 - 924,380 (-)	Ensembl				GRCr8
mRatBN7.2	9	828,369 - 838,648 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	828,372 - 837,219 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	1,275,386 - 1,284,348 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	6,622,649 - 6,630,894 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	5,580,418 - 5,589,383 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	11,064,605 - 11,070,138 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	11,064,605 - 11,070,122 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	10,049,873 - 10,055,406 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Celera	9	7,669,783 - 7,678,118 (+)	NCBI		Celera
Cytogenetic Map	9	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

buspirone (EXP)

cadmium dichloride (EXP)

calcitriol (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

cyclosporin A (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP)

diuron (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

epoxiconazole (ISO)

folic acid (ISO)

glafenine (EXP)

isotretinoin (ISO)

methapyrilene (EXP)

methimazole (EXP)

methylisothiazolinone (ISO)

N-nitrosomorpholine (EXP)

okadaic acid (ISO)

paracetamol (ISO)

phenylmercury acetate (ISO)

pinostrobin (ISO)

pirinixic acid (ISO)

pregnenolone 16alpha-carbonitrile (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium dichromate (ISO)

testosterone (ISO)

tetraphene (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (EXP)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

cytoplasm (IEA)

plasma membrane (IEA,ISO)

Molecular Function

protein binding (ISO)

signaling adaptor activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	GOA pipeline	RGD automated data pipeline
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
3.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:12540842

Genomics

Comparative Map Data

Stap2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	915,546 - 924,604 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	915,550 - 924,380 (-)	Ensembl				GRCr8
mRatBN7.2	9	828,369 - 838,648 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	828,372 - 837,219 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	1,275,386 - 1,284,348 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	6,622,649 - 6,630,894 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	5,580,418 - 5,589,383 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	11,064,605 - 11,070,138 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	11,064,605 - 11,070,122 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	10,049,873 - 10,055,406 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Celera	9	7,669,783 - 7,678,118 (+)	NCBI		Celera
Cytogenetic Map	9	q11	NCBI

STAP2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	4,324,043 - 4,338,827 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	4,324,040 - 4,342,786 (-)	Ensembl			hg38	GRCh38
GRCh37	19	4,324,040 - 4,338,824 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	4,275,040 - 4,289,847 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	19	623,592 - 627,059 (+)	NCBI		Celera
Celera	19	4,268,585 - 4,277,087 (-)	NCBI		Celera
Cytogenetic Map	19	p13.3	NCBI
HuRef	19	4,086,751 - 4,101,309 (-)	NCBI		HuRef
CHM1_1	19	4,323,657 - 4,338,550 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	4,307,445 - 4,326,896 (-)	NCBI		T2T-CHM13v2.0

Stap2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	56,304,074 - 56,315,558 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	56,304,077 - 56,312,584 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	17	55,997,074 - 56,008,402 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	55,997,077 - 56,005,584 (-)	Ensembl			mm10	GRCm38
MGSCv37	17	56,136,500 - 56,144,991 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	17	55,590,370 - 55,598,863 (-)	NCBI		MGSCv36	mm8
Celera	17	59,415,603 - 59,424,167 (-)	NCBI		Celera
Cytogenetic Map	17	D	NCBI
cM Map	17	29.1	NCBI

Stap2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955495	4,541,131 - 4,553,458 (+)	Ensembl
ChiLan1.0	NW_004955495	4,540,867 - 4,548,769 (+)	NCBI	ChiLan1.0	ChiLan1.0

STAP2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	8,722,364 - 8,737,278 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	7,951,770 - 7,967,028 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	3,347,373 - 3,362,722 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	4,294,376 - 4,308,764 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	4,294,376 - 4,308,768 (-)	Ensembl			panPan2	panpan1.1

STAP2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	55,325,492 - 55,336,547 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	55,325,486 - 55,336,446 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	55,053,457 - 55,064,768 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	55,984,370 - 55,995,688 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	55,984,544 - 55,995,575 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	55,044,903 - 55,056,166 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	55,525,816 - 55,537,112 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	55,724,506 - 55,735,757 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Stap2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	215,357,805 - 215,365,233 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936588	2,469,511 - 2,476,940 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936588	2,469,550 - 2,476,921 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STAP2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	74,462,388 - 74,473,791 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	2	74,462,318 - 74,471,535 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	74,955,354 - 74,964,485 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

STAP2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	4,059,794 - 4,065,594 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666081	4,135,898 - 4,150,629 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Stap2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624828	5,340,130 - 5,347,551 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624828	5,339,041 - 5,347,631 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Stap2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	87,389,344 - 87,397,577 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Stap2
8 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	178
Count of miRNA genes:	139
Interacting mature miRNAs:	149
Transcripts:	ENSRNOT00000075121
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631533	Iresp3	Immunoglobin response QTL3	16.2		blood immunoglobulin E amount (VT:0002492)	serum immunoglobulin E level (CMO:0002101)	9	1	6094576	Rat
9589158	Gluco65	Glucose level QTL 65	6.82	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	9	496645	45496645	Rat
10054141	Gmadr4	Adrenal mass QTL 4	2.45	0.0074	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	9	1	21707400	Rat
7411592	Foco8	Food consumption QTL 8	7.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	496645	45496645	Rat
7207814	Bmd91	Bone mineral density QTL 91	3.5		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	9	1	31250552	Rat
9589055	Scfw5	Subcutaneous fat weight QTL 5	5.55	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	9	496645	45496645	Rat
1300124	Cm4	Cardiac mass QTL 4	3.55		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	9	1	41763315	Rat

Markers in Region

RH91102

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	827,981 - 828,122 (-)	MAPPER	mRatBN7.2
Rnor_6.0	9	11,070,385 - 11,070,525	NCBI	Rnor6.0
Rnor_5.0	9	10,055,653 - 10,055,793	UniSTS	Rnor5.0
Celera	9	7,678,365 - 7,678,505	UniSTS
Cytogenetic Map	9	q32	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	156	91	90	59	83	59	6	347	183	11	135	81	92	31	14	14

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001025026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432967	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432969	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083943	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083945	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267484	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267485	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267486	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267487	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267488	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010054617	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC091228	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474092	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000075121 ⟹ ENSRNOP00000065679

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	915,550 - 924,380 (-)	Ensembl
mRatBN7.2 Ensembl	9	828,373 - 837,204 (-)	Ensembl
Rnor_6.0 Ensembl	9	11,064,605 - 11,070,122 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000101244 ⟹ ENSRNOP00000078687

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	915,550 - 924,380 (-)	Ensembl
mRatBN7.2 Ensembl	9	828,372 - 837,219 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000101393 ⟹ ENSRNOP00000096858

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	915,550 - 924,380 (-)	Ensembl
mRatBN7.2 Ensembl	9	828,372 - 837,219 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000154485 ⟹ ENSRNOP00000105822

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	915,550 - 924,380 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000167203 ⟹ ENSRNOP00000111439

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	915,550 - 924,380 (-)	Ensembl

RefSeq Acc Id:

NM_001025026 ⟹ NP_001020197

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	915,546 - 924,380 (-)	NCBI
mRatBN7.2	9	828,369 - 837,204 (-)	NCBI
Rnor_6.0	9	11,064,605 - 11,070,138 (+)	NCBI
Rnor_5.0	9	10,049,873 - 10,055,406 (+)	NCBI
Celera	9	7,669,783 - 7,678,118 (+)	RGD

Sequence:

show sequence

GGCCAGGCTGAGGCTCCTACCGAAAGGACAGGGACCTGGCATGGTCATGGCCTCAGCCCTGTGT
CCACCCCGGGGCCCCAAGCTCAAAGGTGCTCCACCTTCCCACTACTACGAGAACTTCCTAGAGA
AAAAGGGACCCTGTGACCAGGATTACAGGAAGTTCTGGGCGGGCCTCCAGGGTTTAGCCATCTG
TTTCTACAACAGCAATCGGGACTTGCAGCCCCTGGAAAAGCTGGACCTGAGGCTGTTTTCAAAG
CTCAAAGATGAGGCTCTGTTGGGAAGCTCACATGACACTACCTATCACTTCAGCCTGGTTCTCC
GGGACCAGGAGGTTAAATTCAAGGTGGAGAGCCTGGAGTCTTGTGAGATGTGGAAAGGATTTAT
CTTGACTGTGGTGGAGCTCCGTGTCCCATCTAACCTGACCCTGCTGCCCGGACACATGTACATG
ATGGCTGAAGTCCTGGCCAAAGAGGAAGTACGAAGGGCAGCCGAGGTGCCCTGGTGCTTTCTGC
AGGTGAGCAGGCTAGAGGCGCAGCTGCTCCTGGAGCGCTACCCGGAGTGCGGGAACCTGCTTCT
GCGACCTGGAGGGGATGGCAAGGACAGTGTGTCTGTCACTACCCGGCAGATACTCAATGGGTCG
CCGGTGATCAAACACTACAAGGTGAAGCGAGAAGGTTCTAAGTATGTCATCGACGTAGAAGACC
CGTTTTCCTGCCCCTCCCTGGAAGCTGTGGTCAACTATTTTGTGACGCACACCAAGAGGGCGCT
GGTCCCCTTCCTGTTAGATGAGGACTATGAGAAGGTTCTAGGCTTCGTGGATTCGGATCGGGAG
AATGGCGAGAATGCATGGACTGTGCCCTCCTCCCGAGGCTCAGGCCCTGCCCTCCCTGCTAATG
TCCCAAAGCCACTCCCACCTGTACCTGTGTCTGTGTCCAGCCAGGAAGACAAGCTGCCTCAACT
ACCTCCCCTGCCTCAGTTACCAGACCAGGATGAGAACTATGTGACTCCCATTGAAGACTCCCTA
GCAACTGAATACATGAATCGGGATGATCTCAAGGCCATTACCAACATCTGGACCAGGAAACTAG
GTGGAAGCTCACCCCAGGCTTCCTCCCTTGTGACAAGACTTGGGGATATCACCGCTGAGCTGGA
AGAGAAACTACAGAAGAGGAGGGCACTGGAACACTGATCCAGGTTCCCAGGGACCAGTGTGCTA
TCTCTGGGTACAAGTCTTCCATCAGCTCTATCCTCACTCAGGGGACAGGACACAGCCAGCTTGG
TGCAAAATGTCCTCTCAAAAGTAAAGCAGGGAGACCCCTGGGAATTTTGGGGCTACCCTCAACT
GTATAGTAAGTTCCACAGTATCCTGGGCTACAGAGTGAGACCTTGTTTAATAAATCCAAAACCA
AAACCAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039083943 ⟹ XP_038939871

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	915,546 - 924,604 (-)	NCBI
mRatBN7.2	9	828,369 - 838,633 (-)	NCBI

RefSeq Acc Id:

XM_039083944 ⟹ XP_038939872

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	915,546 - 924,604 (-)	NCBI
mRatBN7.2	9	828,369 - 838,644 (-)	NCBI

RefSeq Acc Id:

XM_039083945 ⟹ XP_038939873

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	915,546 - 924,604 (-)	NCBI
mRatBN7.2	9	828,369 - 838,648 (-)	NCBI

RefSeq Acc Id:

XM_063267483 ⟹ XP_063123553

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	915,546 - 924,604 (-)	NCBI

RefSeq Acc Id:

XM_063267484 ⟹ XP_063123554

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	915,546 - 924,604 (-)	NCBI

RefSeq Acc Id:

XM_063267485 ⟹ XP_063123555

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	915,546 - 924,604 (-)	NCBI

RefSeq Acc Id:

XM_063267486 ⟹ XP_063123556

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	916,083 - 924,604 (-)	NCBI

RefSeq Acc Id:

XM_063267487 ⟹ XP_063123557

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	915,546 - 924,604 (-)	NCBI

RefSeq Acc Id:

XM_063267488 ⟹ XP_063123558

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	916,397 - 924,604 (-)	NCBI

RefSeq Acc Id:

XM_063267489 ⟹ XP_063123559

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	916,397 - 924,604 (-)	NCBI

RefSeq Acc Id:

XR_010054617

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	915,775 - 924,604 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001020197	(Get FASTA)	NCBI Sequence Viewer
	NP_001419892	(Get FASTA)	NCBI Sequence Viewer
	NP_001419893	(Get FASTA)	NCBI Sequence Viewer
	NP_001419894	(Get FASTA)	NCBI Sequence Viewer
	NP_001419895	(Get FASTA)	NCBI Sequence Viewer
	NP_001419896	(Get FASTA)	NCBI Sequence Viewer
	NP_001419897	(Get FASTA)	NCBI Sequence Viewer
	NP_001419898	(Get FASTA)	NCBI Sequence Viewer
	XP_038939871	(Get FASTA)	NCBI Sequence Viewer
	XP_038939872	(Get FASTA)	NCBI Sequence Viewer
	XP_038939873	(Get FASTA)	NCBI Sequence Viewer
	XP_063123553	(Get FASTA)	NCBI Sequence Viewer
	XP_063123554	(Get FASTA)	NCBI Sequence Viewer
	XP_063123555	(Get FASTA)	NCBI Sequence Viewer
	XP_063123556	(Get FASTA)	NCBI Sequence Viewer
	XP_063123557	(Get FASTA)	NCBI Sequence Viewer
	XP_063123558	(Get FASTA)	NCBI Sequence Viewer
	XP_063123559	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH91228	(Get FASTA)	NCBI Sequence Viewer
	EDL83674	(Get FASTA)	NCBI Sequence Viewer
	EDL83675	(Get FASTA)	NCBI Sequence Viewer
	EDL83676	(Get FASTA)	NCBI Sequence Viewer
	EDL83677	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000065679
	ENSRNOP00000065679.2
	ENSRNOP00000078687
	ENSRNOP00000078687.2
	ENSRNOP00000096858.2
	ENSRNOP00000105822.1
	ENSRNOP00000111439
	ENSRNOP00000111439.1

RefSeq Acc Id:

NP_001020197 ⟸ NM_001025026

- UniProtKB:

Q5BK28 (UniProtKB/TrEMBL), M0R887 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASALCPPRGPKLKGAPPSHYYENFLEKKGPCDQDYRKFWAGLQGLAICFYNSNRDLQPLEKLD
LRLFSKLKDEALLGSSHDTTYHFSLVLRDQEVKFKVESLESCEMWKGFILTVVELRVPSNLTLL
PGHMYMMAEVLAKEEVRRAAEVPWCFLQVSRLEAQLLLERYPECGNLLLRPGGDGKDSVSVTTR
QILNGSPVIKHYKVKREGSKYVIDVEDPFSCPSLEAVVNYFVTHTKRALVPFLLDEDYEKVLGF
VDSDRENGENAWTVPSSRGSGPALPANVPKPLPPVPVSVSSQEDKLPQLPPLPQLPDQDENYVT
PIEDSLATEYMNRDDLKAITNIWTRKLGGSSPQASSLVTRLGDITAELEEKLQKRRALEH

hide sequence

Ensembl Acc Id:

ENSRNOP00000065679 ⟸ ENSRNOT00000075121

RefSeq Acc Id:	XP_038939873 ⟸ XM_039083945
- Peptide Label:	isoform X4
- UniProtKB:	M0R887 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939872 ⟸ XM_039083944
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038939871 ⟸ XM_039083943
- Peptide Label:	isoform X1

Ensembl Acc Id:

ENSRNOP00000096858 ⟸ ENSRNOT00000101393

Ensembl Acc Id:

ENSRNOP00000078687 ⟸ ENSRNOT00000101244

RefSeq Acc Id:	XP_063123557 ⟸ XM_063267487
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063123554 ⟸ XM_063267484
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063123555 ⟸ XM_063267485
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063123553 ⟸ XM_063267483
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063123556 ⟸ XM_063267486
- Peptide Label:	isoform X7
- UniProtKB:	A6KR17 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123558 ⟸ XM_063267488
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_063123559 ⟸ XM_063267489
- Peptide Label:	isoform X10

Ensembl Acc Id:

ENSRNOP00000111439 ⟸ ENSRNOT00000167203

Ensembl Acc Id:

ENSRNOP00000105822 ⟸ ENSRNOT00000154485

Protein Domains

SH2

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0R887-F1-model_v2	AlphaFold	M0R887	1-379	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696474

Promoter ID:

EPDNEW_R6999

Type:

initiation region

Name:

Stap2_1

Description:

signal transducing adaptor family member 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	9	11,064,598 - 11,064,658	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1566020	AgrOrtholog
BioCyc Gene	G2FUF-28569	BioCyc
Ensembl Genes	ENSRNOG00000047306	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000075121	ENTREZGENE
	ENSRNOT00000075121.4	UniProtKB/TrEMBL
	ENSRNOT00000101244	ENTREZGENE
	ENSRNOT00000101244.2	UniProtKB/TrEMBL
	ENSRNOT00000101393.2	UniProtKB/TrEMBL
	ENSRNOT00000154485.1	UniProtKB/TrEMBL
	ENSRNOT00000167203	ENTREZGENE
	ENSRNOT00000167203.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.29.30	UniProtKB/TrEMBL
	3.30.505.10	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7321609	IMAGE-MGC_LOAD
InterPro	PH_like_dom	UniProtKB/TrEMBL
	SH2	UniProtKB/TrEMBL
	SH2_dom_sf	UniProtKB/TrEMBL
	STAP1/STAP2	UniProtKB/TrEMBL
	STAP2_SH2	UniProtKB/TrEMBL
KEGG Report	rno:363334	UniProtKB/TrEMBL
MGC_CLONE	MGC:108972	IMAGE-MGC_LOAD
NCBI Gene	363334	ENTREZGENE
PANTHER	PTHR16186	UniProtKB/TrEMBL
	SIGNAL-TRANSDUCING ADAPTOR PROTEIN 2	UniProtKB/TrEMBL
PhenoGen	Stap2	PhenoGen
PROSITE	SH2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000047306	RatGTEx
SMART	SH2	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
	SSF55550	UniProtKB/TrEMBL
UniProt	A0A8I6B4X4_RAT	UniProtKB/TrEMBL
	A0A8I6G264_RAT	UniProtKB/TrEMBL
	A0ABK0LY41_RAT	UniProtKB/TrEMBL
	A0ABK0M010_RAT	UniProtKB/TrEMBL
	A6KR17	ENTREZGENE, UniProtKB/TrEMBL
	A6KR19_RAT	UniProtKB/TrEMBL
	M0R887	ENTREZGENE, UniProtKB/TrEMBL
	Q5BK28	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-07	Stap2	signal transducing adaptor family member 2	Stap2	signal-transducing adaptor protein-2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-02-09	Stap2	signal-transducing adaptor protein-2			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message