Acp1l1 (acid phosphatase 1 like 1) - Rat Genome Database

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Gene: Acp1l1 (acid phosphatase 1 like 1) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Acp1l1 (Ensembl: AABR07036974.1)
Name: acid phosphatase 1 like 1
RGD ID: 1565965
Description: Predicted to enable acid phosphatase activity and non-membrane spanning protein tyrosine phosphatase activity. Predicted to be located in cytoplasm; INTERACTS WITH ammonium chloride.
Type: protein-coding (Ensembl: processed_pseudogene)
RefSeq Status: MODEL
Previously known as: AF171072; hypothetical gene supported by NM_021262; hypothetical gene supported by NM_021262; AF171072; LOC302513; low molecular weight phosphotyrosine protein phosphatase-like; RGD1565965
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X10,523,951 - 10,524,559 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 EnsemblX10,523,984 - 10,524,559 (+)EnsemblGRCr8
mRatBN7.2X7,871,574 - 7,872,173 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX7,871,598 - 7,872,298 (+)EnsemblmRatBN7.2
Rnor_6.0X8,645,895 - 8,646,503 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X9,445,231 - 9,445,839 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4X19,777,421 - 19,777,996 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
CeleraX8,421,474 - 8,422,082 (+)NCBICelera
Cytogenetic MapXq12NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Variants

.
Variants in Acp1l1
1 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70165Bp64Blood pressure QTL 645.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X400149344939387Rat
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X197044046970440Rat
70166Bp65Blood pressure QTL 655.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X400149314046933Rat
631666Iddm5Insulin dependent diabetes mellitus QTL 5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X811148653111486Rat
634325Bw13Body weight QTL 130body mass (VT:0001259)body weight (CMO:0000012)X400149324470521Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
ectoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
sensory system
visual system
2 2 3 5 3 2 2 2 2

Sequence


RefSeq Acc Id: XM_039100490   ⟹   XP_038956418
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X10,523,951 - 10,524,559 (+)NCBI
mRatBN7.2X7,871,574 - 7,872,173 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038956418 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_038956418   ⟸   XM_039100490
- UniProtKB: A0A8I6G7Q4 (UniProtKB/TrEMBL)

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-3100 BioCyc
Ensembl Genes ENSRNOG00000030819 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000047059 ENTREZGENE
NCBI Gene 302513 ENTREZGENE
PhenoGen Acp1l1 PhenoGen
RatGTEx ENSRNOG00000030819 RatGTEx
UniProt A0A8I6G7Q4 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 Acp1l1  acid phosphatase 1 like 1  RGD1565965  hypothetical gene supported by NM_021262; AF171072  Symbol and Name Changed 1299863 APPROVED
2008-04-30 RGD1565965  hypothetical gene supported by NM_021262; AF171072   RGD1565965_predicted  hypothetical gene supported by NM_021262; AF171072 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1565965_predicted  hypothetical gene supported by NM_021262; AF171072 (predicted)  LOC302513  hypothetical gene supported by NM_021262; AF171072  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC302513  hypothetical gene supported by NM_021262; AF171072      Symbol and Name status set to provisional 70820 PROVISIONAL