Tasl (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | X | 54,354,755 - 54,373,930 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | X | 54,312,036 - 54,374,144 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | X | 50,403,962 - 50,423,141 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 50,361,248 - 50,423,269 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | X | 51,733,739 - 51,752,906 (+) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 55,234,110 - 55,253,281 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 52,865,125 - 52,884,294 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 54,390,733 - 54,409,466 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 54,390,733 - 54,409,466 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | X | 54,590,577 - 54,609,310 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | X | 72,641,314 - 72,660,592 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | X | 50,943,855 - 50,963,014 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q21 | NCBI | | | | |
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TASL (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | X | 30,558,809 - 30,577,766 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 30,557,707 - 30,577,766 (-) | Ensembl | | | hg38 | GRCh38 | GRCh37 | X | 30,576,926 - 30,595,883 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 30,486,862 - 30,505,835 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | X | 30,336,597 - 30,355,571 | NCBI | | | | | Celera | X | 34,698,462 - 34,717,597 (-) | NCBI | | Celera | | | Cytogenetic Map | X | p21.2 | NCBI | | | | | HuRef | X | 28,314,203 - 28,333,300 (-) | NCBI | | HuRef | | | CHM1_1 | X | 30,607,829 - 30,626,921 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 30,150,830 - 30,169,806 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Tasl (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | X | 84,820,445 - 84,935,105 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 84,913,960 - 84,935,105 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | X | 85,776,968 - 85,891,499 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 85,870,354 - 85,891,499 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | X | 83,115,612 - 83,136,838 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 82,122,992 - 82,144,218 (+) | NCBI | | MGSCv36 | mm8 | | Celera | X | 77,064,940 - 77,086,117 (+) | NCBI | | Celera | | | Cytogenetic Map | X | C1 | NCBI | | | | | cM Map | X | 39.39 | NCBI | | | | |
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Tasl (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955531 | 267,216 - 293,127 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955531 | 207,614 - 293,127 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TASL (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | X | 32,351,736 - 32,372,522 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 32,355,112 - 32,375,901 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 23,159,321 - 23,178,192 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 30,716,157 - 30,735,059 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 30,716,617 - 30,717,522 (-) | Ensembl | | | panPan2 | panpan1.1 |
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TASL (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | X | 25,664,361 - 25,679,044 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | X | 30,639,199 - 30,653,660 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | X | 25,695,592 - 25,710,287 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | X | 25,741,501 - 25,755,942 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 25,732,975 - 25,747,432 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 25,829,165 - 25,843,624 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Tasl (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | X | 18,534,520 - 18,554,443 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936553 | 6,628,131 - 6,629,027 (-) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936553 | 6,628,131 - 6,629,027 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TASL (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | X | 26,365,027 - 26,384,760 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | X | 26,363,808 - 26,384,933 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | X | 28,635,141 - 28,651,261 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TASL (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | X | 28,953,805 - 28,973,055 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | X | 28,954,266 - 28,955,171 (-) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666056 | 30,933,802 - 30,953,001 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tasl (Heterocephalus glaber - naked mole-rat) |
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Tasl (Rattus rattus - black rat) |
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