Gpat3 (glycerol-3-phosphate acyltransferase 3) - Rat Genome Database

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Gene: Gpat3 (glycerol-3-phosphate acyltransferase 3) Rattus norvegicus
Analyze
Symbol: Gpat3
Name: glycerol-3-phosphate acyltransferase 3
RGD ID: 1565703
Description: Predicted to enable 1-acylglycerol-3-phosphate O-acyltransferase activity and glycerol-3-phosphate O-acyltransferase activity. Predicted to be involved in several processes, including glycerol-3-phosphate metabolic process; regulation of TOR signaling; and triglyceride biosynthetic process. Predicted to be located in endoplasmic reticulum membrane. Orthologous to human GPAT3 (glycerol-3-phosphate acyltransferase 3); PARTICIPATES IN glycerolipid metabolic pathway; glycerophospholipid metabolic pathway; INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 1-acyl-sn-glycerol-3-phosphate O-acyltransferase 10; 1-acyl-sn-glycerol-3-phosphate O-acyltransferase 9; 1-acylglycerol-3-phosphate O-acyltransferase 9; 1-AGP acyltransferase 9; 1-AGPAT 9; AGPAT 10; Agpat9; GPAT-3; LOC305166; LPAAT-theta; lysophosphatidic acid acyltransferase theta; MGC114395; similar to hypothetical protein 4933408F15
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8149,018,762 - 9,072,552 (-)NCBIGRCr8
mRatBN7.2148,715,367 - 8,768,051 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl148,714,373 - 8,766,490 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx148,683,502 - 8,733,882 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0149,983,344 - 10,033,730 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0148,679,954 - 8,730,338 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01410,343,287 - 10,396,565 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1410,343,282 - 10,395,047 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01410,293,026 - 10,343,730 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4149,998,566 - 10,050,154 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera148,825,957 - 8,876,029 (-)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-(chloromethyl)pyridine  (ISO)
2-hydroxypropanoic acid  (ISO)
2-palmitoylglycerol  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methyl-3H-imidazo[4,5-f]quinolin-2-amine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-methylene-bis-(2-chloroaniline)  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-nitro-1,2-phenylenediamine  (ISO)
6-(4-chlorophenyl)imidazo[2,1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime  (ISO)
Acetyl tributyl citrate  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (ISO)
amphetamine  (EXP)
ampicillin  (ISO)
arsenite(3-)  (ISO)
azathioprine  (ISO)
baicalein  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bortezomib  (ISO)
bromobenzene  (EXP)
cadmium dichloride  (EXP,ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
chloroacetaldehyde  (ISO)
cidofovir anhydrous  (ISO)
cisplatin  (ISO)
clodronic acid  (ISO)
clofibrate  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
coumaphos  (ISO)
cyclosporin A  (ISO)
DDT  (ISO)
dexamethasone  (ISO)
diazinon  (ISO)
dichloroacetic acid  (ISO)
dimethylarsinous acid  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
endosulfan  (EXP)
ethanol  (ISO)
ethylparaben  (ISO)
eugenol  (ISO)
fenofibrate  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
furan  (EXP)
gamma-hexachlorocyclohexane  (ISO)
gentamycin  (EXP)
GW 4064  (ISO)
GW 7647  (ISO)
hydrogen peroxide  (ISO)
hydroquinone  (ISO)
ibuprofen  (ISO)
ifosfamide  (ISO)
inulin  (ISO)
ivermectin  (ISO)
L-ascorbic acid  (ISO)
lipopolysaccharide  (ISO)
menadione  (ISO)
mercury dibromide  (ISO)
mercury dichloride  (EXP)
metformin  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
Monobutylphthalate  (ISO)
monosodium L-glutamate  (ISO)
nickel atom  (ISO)
nickel dichloride  (ISO)
nickel sulfate  (ISO)
nitrofen  (EXP)
oleic acid  (ISO)
orphenadrine  (EXP)
ozone  (EXP)
p-chloromercuribenzoic acid  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP)
pentachlorophenol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenformin  (EXP)
phenobarbital  (ISO)
phenol  (ISO)
phenylmercury acetate  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
pirinixic acid  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
rotenone  (EXP)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (EXP)
tetrachloroethene  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
tributylstannane  (ISO)
trichloroethene  (ISO)
triptonide  (ISO)
troglitazone  (ISO)
trovafloxacin  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:17002884   PMID:17170135   PMID:19318427  


Genomics

Comparative Map Data
Gpat3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8149,018,762 - 9,072,552 (-)NCBIGRCr8
mRatBN7.2148,715,367 - 8,768,051 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl148,714,373 - 8,766,490 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx148,683,502 - 8,733,882 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0149,983,344 - 10,033,730 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0148,679,954 - 8,730,338 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01410,343,287 - 10,396,565 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1410,343,282 - 10,395,047 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01410,293,026 - 10,343,730 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4149,998,566 - 10,050,154 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera148,825,957 - 8,876,029 (-)NCBICelera
Cytogenetic Map14p22NCBI
GPAT3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38483,535,587 - 83,605,875 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl483,535,914 - 83,605,875 (+)EnsemblGRCh38hg38GRCh38
GRCh37484,457,067 - 84,527,028 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36484,676,677 - 84,746,050 (+)NCBINCBI36Build 36hg18NCBI36
Celera481,748,096 - 81,817,458 (+)NCBICelera
Cytogenetic Map4q21.23NCBI
HuRef480,199,878 - 80,270,025 (+)NCBIHuRef
CHM1_1484,433,633 - 84,503,613 (+)NCBICHM1_1
T2T-CHM13v2.0486,865,686 - 86,935,953 (+)NCBIT2T-CHM13v2.0
Gpat3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395100,994,095 - 101,046,968 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5100,993,579 - 101,046,968 (+)EnsemblGRCm39 Ensembl
GRCm385100,845,665 - 100,899,102 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5100,845,713 - 100,899,102 (+)EnsemblGRCm38mm10GRCm38
MGSCv375101,275,248 - 101,328,121 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365101,086,598 - 101,139,403 (+)NCBIMGSCv36mm8
Celera598,173,985 - 98,220,770 (+)NCBICelera
Cytogenetic Map5E4NCBI
cM Map548.52NCBI
Gpat3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554746,118,437 - 6,193,847 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554746,119,516 - 6,192,784 (-)NCBIChiLan1.0ChiLan1.0
GPAT3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2346,458,096 - 46,576,833 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1446,647,506 - 46,767,204 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0440,590,801 - 40,660,527 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1446,437,743 - 46,507,006 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl446,438,848 - 46,506,455 (-)Ensemblpanpan1.1panPan2
GPAT3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1327,355,154 - 7,414,921 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl327,353,965 - 7,414,493 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3234,469,887 - 34,530,300 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0327,377,468 - 7,437,918 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl327,376,482 - 7,437,914 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1327,447,023 - 7,507,505 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0327,316,616 - 7,377,022 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03232,584,640 - 32,645,039 (-)NCBIUU_Cfam_GSD_1.0
Gpat3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244052854,945,886 - 5,005,435 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367381,108,822 - 1,166,913 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367381,107,725 - 1,166,697 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPAT3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8134,912,491 - 134,977,388 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18134,912,493 - 135,002,140 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28144,210,527 - 144,298,484 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GPAT3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1731,897,507 - 31,990,028 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl731,964,903 - 31,990,541 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603710,516,575 - 10,585,581 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gpat3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624900493,852 - 546,983 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624900493,982 - 545,932 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gpat3
1051 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:32
Count of miRNA genes:30
Interacting mature miRNAs:30
Transcripts:ENSRNOT00000002936
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2300159Bmd61Bone mineral density QTL 615.30.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat
2300183Bmd60Bone mineral density QTL 605.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat
619619Rf4Renal disease susceptibility QTL 44.10.002urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)14132754612Rat
634352Apr6Acute phase response QTL 63.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)14141131407Rat
71115Niddm15Non-insulin dependent diabetes mellitus QTL 154.8blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)14121760611030812Rat
70204Niddm20Non-insulin dependent diabetes mellitus QTL 205.10.000008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)14121760616960180Rat
724541Niddm53Non-insulin dependent diabetes mellitus QTL 530.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1438130749088978Rat
2293089Iddm31Insulin dependent diabetes mellitus QTL 314.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)14381307418274691Rat
2293089Iddm31Insulin dependent diabetes mellitus QTL 314.7blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)14381307418274691Rat
1300114Srn2Serum renin concentration QTL 23.27blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)14381307421217635Rat
70195Mcs8Mammary carcinoma susceptibility QTL 84.28mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)14381307424531477Rat
1331740Bw26Body weight QTL 263.028body mass (VT:0001259)body weight (CMO:0000012)14381307430767156Rat
1581500Renag1Renal agenesis QTL 1kidney development trait (VT:0000527)percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)14817066868298175Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14826709053267090Rat
2302045Pia39Pristane induced arthritis QTL 394.90.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G2a level (CMO:0002116)14826709053267090Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 7 5 5 2 3 23 10 2
Low 3 43 43 29 19 29 6 8 74 12 31 11 6
Below cutoff 7 7 7

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000002936   ⟹   ENSRNOP00000002936
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl148,714,373 - 8,766,490 (-)Ensembl
Rnor_6.0 Ensembl1410,343,282 - 10,395,047 (-)Ensembl
RefSeq Acc Id: NM_001025670   ⟹   NP_001020841
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8149,019,767 - 9,070,865 (-)NCBI
mRatBN7.2148,715,367 - 8,766,474 (-)NCBI
Rnor_6.01410,344,295 - 10,394,999 (-)NCBI
Rnor_5.01410,293,026 - 10,343,730 (-)NCBI
RGSC_v3.4149,998,566 - 10,050,154 (-)RGD
Celera148,825,957 - 8,876,029 (-)RGD
Sequence:
RefSeq Acc Id: XM_008770019   ⟹   XP_008768241
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8149,018,762 - 9,071,209 (-)NCBI
mRatBN7.2148,715,679 - 8,766,818 (-)NCBI
Rnor_6.01410,343,287 - 10,395,273 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008770020   ⟹   XP_008768242
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8149,018,762 - 9,072,552 (-)NCBI
mRatBN7.2148,715,679 - 8,768,051 (-)NCBI
Rnor_6.01410,343,287 - 10,396,565 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008770021   ⟹   XP_008768243
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8149,018,762 - 9,071,810 (-)NCBI
mRatBN7.2148,715,679 - 8,767,420 (-)NCBI
Rnor_6.01410,343,287 - 10,395,943 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039091833   ⟹   XP_038947761
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8149,018,762 - 9,072,420 (-)NCBI
mRatBN7.2148,715,679 - 8,768,051 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001020841   ⟸   NM_001025670
- UniProtKB: Q4V8J4 (UniProtKB/Swiss-Prot),   A6K5X4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008768242   ⟸   XM_008770020
- Peptide Label: isoform X1
- UniProtKB: Q4V8J4 (UniProtKB/Swiss-Prot),   A6K5X4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008768243   ⟸   XM_008770021
- Peptide Label: isoform X1
- UniProtKB: Q4V8J4 (UniProtKB/Swiss-Prot),   A6K5X4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008768241   ⟸   XM_008770019
- Peptide Label: isoform X1
- UniProtKB: Q4V8J4 (UniProtKB/Swiss-Prot),   A6K5X4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000002936   ⟸   ENSRNOT00000002936
RefSeq Acc Id: XP_038947761   ⟸   XM_039091833
- Peptide Label: isoform X1
- UniProtKB: Q4V8J4 (UniProtKB/Swiss-Prot),   A6K5X4 (UniProtKB/TrEMBL)
Protein Domains
Phospholipid/glycerol acyltransferase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q4V8J4-F1-model_v2 AlphaFold Q4V8J4 1-457 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699188
Promoter ID:EPDNEW_R9712
Type:initiation region
Name:Gpat3_1
Description:glycerol-3-phosphate acyltransferase 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01410,395,061 - 10,395,121EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1565703 AgrOrtholog
BioCyc Gene G2FUF-16420 BioCyc
BioCyc Pathway PWY-5667 [CDP-diacylglycerol biosynthesis I] BioCyc
  PWY-7411 [phosphatidate biosynthesis (yeast)] BioCyc
  PWY-8053 [anandamide biosynthesis II] BioCyc
  TRIGLSYN-PWY [diacylglycerol and triacylglycerol biosynthesis] BioCyc
BioCyc Pathway Image PWY-5667 BioCyc
  PWY-7411 BioCyc
  PWY-8053 BioCyc
  TRIGLSYN-PWY BioCyc
Ensembl Genes ENSRNOG00000002159 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00055024920 UniProtKB/Swiss-Prot
  ENSRNOG00060010241 UniProtKB/Swiss-Prot
  ENSRNOG00065012184 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000002936 ENTREZGENE
  ENSRNOT00000002936.7 UniProtKB/Swiss-Prot
  ENSRNOT00055042955 UniProtKB/Swiss-Prot
  ENSRNOT00060017313 UniProtKB/Swiss-Prot
  ENSRNOT00065019811 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7442656 IMAGE-MGC_LOAD
InterPro LPCAT1-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Plipid/glycerol_acylTrfase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:305166 UniProtKB/Swiss-Prot
MGC_CLONE MGC:114395 IMAGE-MGC_LOAD
NCBI Gene 305166 ENTREZGENE
PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PHOSPHOLIPID ACYLTRANSFERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Acyltransferase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Gpat3 PhenoGen
RatGTEx ENSRNOG00000002159 RatGTEx
  ENSRNOG00055024920 RatGTEx
  ENSRNOG00060010241 RatGTEx
  ENSRNOG00065012184 RatGTEx
SMART PlsC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Glycerol-3-phosphate (1)-acyltransferase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A6K5X4 ENTREZGENE, UniProtKB/TrEMBL
  GPAT3_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-13 Gpat3  glycerol-3-phosphate acyltransferase 3  Agpat9  1-acylglycerol-3-phosphate O-acyltransferase 9  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-04 Agpat9  1-acylglycerol-3-phosphate O-acyltransferase 9  LOC305166  similar to hypothetical protein 4933408F15  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-02-09 LOC305166  similar to hypothetical protein 4933408F15      Symbol and Name status set to provisional 70820 PROVISIONAL