Gmip (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 16 | 19,634,630 - 19,648,916 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 16 | 19,634,630 - 19,647,933 (-) | Ensembl | | | | GRCr8 | mRatBN7.2 | 16 | 19,600,723 - 19,614,459 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 16 | 19,600,723 - 19,614,027 (-) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 16 | 19,642,529 - 19,655,828 (-) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 16 | 20,780,498 - 20,793,817 (-) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 16 | 19,695,510 - 19,708,809 (-) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 16 | 21,349,652 - 21,363,412 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 16 | 21,349,652 - 21,362,955 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 16 | 21,263,641 - 21,277,396 (-) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 16 | 20,086,046 - 20,099,349 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 16 | 19,789,752 - 19,803,055 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | p14 | NCBI | | | | |
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GMIP (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 19 | 19,629,476 - 19,643,657 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 19 | 19,629,473 - 19,643,657 (-) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 19 | 19,740,285 - 19,754,466 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 19,601,285 - 19,615,455 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 19 | 19,601,284 - 19,615,417 | NCBI | | | | | Celera | 19 | 19,644,360 - 19,658,530 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | p13.11 | NCBI | | | | | HuRef | 19 | 19,302,706 - 19,316,876 (-) | NCBI | | HuRef | | | CHM1_1 | 19 | 19,741,371 - 19,755,541 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 19 | 19,766,986 - 19,781,167 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Gmip (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 8 | 70,260,912 - 70,274,520 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 70,261,329 - 70,274,520 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 8 | 69,808,298 - 69,821,870 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 69,808,679 - 69,821,870 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 8 | 72,332,586 - 72,345,769 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 72,737,676 - 72,750,859 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 72,359,699 - 72,372,861 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | B3.3 | NCBI | | | | | cM Map | 8 | 33.88 | NCBI | | | | |
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Gmip (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955524 | 2,380,093 - 2,389,411 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955524 | 2,380,099 - 2,389,154 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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GMIP (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 20 | 24,490,608 - 24,504,827 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 19 | 23,497,062 - 23,511,273 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 19 | 19,066,700 - 19,080,904 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 19 | 20,063,086 - 20,076,786 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 19 | 20,063,086 - 20,076,786 (-) | Ensembl | | | panPan2 | panpan1.1 |
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GMIP (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 20 | 43,636,639 - 43,646,093 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 43,636,352 - 43,645,795 (+) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 43,552,223 - 43,561,679 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 44,122,090 - 44,131,757 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 44,121,891 - 44,131,752 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 20 | 43,360,010 - 43,369,465 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 43,769,304 - 43,778,970 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 44,045,203 - 44,054,662 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Gmip (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024405118 | 202,311,583 - 202,322,865 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936596 | 1,860,853 - 1,871,579 (+) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936596 | 1,860,766 - 1,872,004 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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GMIP (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 2 | 58,286,934 - 58,296,261 (+) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 58,286,877 - 58,296,262 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 58,399,771 - 58,409,129 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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GMIP (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 6 | 18,088,545 - 18,102,718 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 6 | 18,088,098 - 18,101,118 (-) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666074 | 1,196,111 - 1,210,503 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Gmip (Heterocephalus glaber - naked mole-rat) |
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Gmip (Rattus rattus - black rat) |
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