Tmem51 (transmembrane protein 51) - Rat Genome Database

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Gene: Tmem51 (transmembrane protein 51) Rattus norvegicus
Analyze
Symbol: Tmem51
Name: transmembrane protein 51
RGD ID: 1565452
Description: Predicted to be located in membrane. Orthologous to human TMEM51 (transmembrane protein 51); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC500578; RGD1565452; similar to BC003277 protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85159,608,865 - 159,658,918 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl5159,608,866 - 159,658,891 (-)EnsemblGRCr8
mRatBN7.25154,325,853 - 154,375,882 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5154,325,856 - 154,375,882 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx5157,011,201 - 157,061,248 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05158,784,518 - 158,834,563 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05158,773,627 - 158,823,672 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.05160,570,510 - 160,620,647 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5160,570,502 - 160,620,334 (-)Ensemblrn6Rnor6.0
Rnor_5.05164,280,429 - 164,331,199 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.45160,938,672 - 160,988,578 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera5152,676,000 - 152,726,010 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Tmem51
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85159,608,865 - 159,658,918 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl5159,608,866 - 159,658,891 (-)EnsemblGRCr8
mRatBN7.25154,325,853 - 154,375,882 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5154,325,856 - 154,375,882 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx5157,011,201 - 157,061,248 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05158,784,518 - 158,834,563 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05158,773,627 - 158,823,672 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.05160,570,510 - 160,620,647 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5160,570,502 - 160,620,334 (-)Ensemblrn6Rnor6.0
Rnor_5.05164,280,429 - 164,331,199 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.45160,938,672 - 160,988,578 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera5152,676,000 - 152,726,010 (-)NCBICelera
Cytogenetic Map5q36NCBI
TMEM51
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38115,152,566 - 15,220,478 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl115,152,498 - 15,220,484 (+)Ensemblhg38GRCh38
GRCh37115,479,062 - 15,546,974 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36115,352,816 - 15,419,459 (+)NCBIBuild 36Build 36hg18NCBI36
Celera113,961,915 - 14,029,876 (+)NCBICelera
Cytogenetic Map1p36.21NCBI
HuRef113,998,854 - 14,066,773 (+)NCBIHuRef
CHM1_1115,277,332 - 15,345,401 (+)NCBICHM1_1
T2T-CHM13v2.0114,596,611 - 14,664,561 (+)NCBIT2T-CHM13v2.0
Tmem51
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394141,758,301 - 141,811,985 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4141,758,303 - 141,811,615 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm384142,030,990 - 142,084,928 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4142,030,992 - 142,084,304 (-)Ensemblmm10GRCm38
MGSCv374141,586,908 - 141,640,219 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv364141,303,069 - 141,356,380 (-)NCBIMGSCv36mm8
Celera4143,847,330 - 143,900,826 (-)NCBICelera
Cytogenetic Map4D3NCBI
cM Map475.17NCBI
Tmem51
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555272,893,040 - 2,944,542 (-)Ensembl
ChiLan1.0NW_0049555272,893,040 - 2,944,542 (-)NCBIChiLan1.0ChiLan1.0
TMEM51
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21211,700,268 - 211,763,727 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11210,947,446 - 211,010,889 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0114,293,923 - 14,358,165 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1115,287,723 - 15,351,582 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl115,346,218 - 15,351,584 (+)EnsemblpanPan2panpan1.1
TMEM51
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1282,251,395 - 82,307,008 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl282,252,110 - 82,307,222 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha278,788,717 - 78,844,404 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0282,901,367 - 82,956,874 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl282,901,367 - 82,957,028 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1279,653,343 - 79,709,022 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0280,671,632 - 80,727,356 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0281,736,833 - 81,792,554 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Tmem51
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505837,129,121 - 37,138,181 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364742,953,925 - 2,963,677 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364742,953,969 - 2,962,963 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM51
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl674,434,050 - 74,486,780 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1674,433,612 - 74,486,784 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2668,868,130 - 68,871,830 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM51
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120117,057,215 - 117,128,428 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20117,057,041 - 117,127,184 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605420,770,529 - 20,842,176 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem51
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247641,524,793 - 1,560,646 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247641,512,251 - 1,560,533 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Tmem51
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1116,133,451 - 16,138,571 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Tmem51
177 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:250
Count of miRNA genes:167
Interacting mature miRNAs:188
Transcripts:ENSRNOT00000019171
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5130249266172190305Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5116702075161702075Rat
1354583Despr3Despair related QTL34.980.0002locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)5132930505172190305Rat
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5141212838172190305Rat
1300119Bp180Blood pressure QTL 1803.82arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)5149642129171146538Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)599905133172190305Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5133789363172190305Rat
1331803Rf32Renal function QTL 322.798kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)5134369199172190305Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)565089051166764498Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5136631198172190305Rat
1354631Swd2Spike wave discharge measurement QTL 23.640.0002brain electrophysiology trait (VT:0010557)brain total spike-and-wave discharge duration (CMO:0001740)5156396728172190305Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5133081618172190305Rat
631263Cm24Cardiac mass QTL 243.5heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)5149805999162987697Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)551657967166600247Rat
631505Bp103Blood pressure QTL 1033.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5138002522170842766Rat
1581505Rf54Renal function QTL 54kidney physiology trait (VT:0002136)kidney 20-HETE level (CMO:0001854)5133270647172190305Rat
2317753Glom24Glomerulus QTL 243.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)5141764300172190305Rat
1331721Bp210Blood pressure QTL 2103.413arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)5148093485172129029Rat
8694169Bw148Body weight QTL 14850.001body mass (VT:0001259)body weight gain (CMO:0000420)5133789363172190305Rat
1581510Cm54Cardiac mass QTL 543.40.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)5125969677172190305Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555124766172190305Rat
631272Lanf1Left ventricular atrial natriuretic factor QTL 112heart left ventricle natriuretic peptide A amount (VT:0010596)heart left ventricle natriuretic peptide A level (CMO:0002165)5156396728167181764Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5131708216172190305Rat
2313096Bmd78Bone mineral density QTL 783.10.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)5149661912166600247Rat
8694441Bw169Body weight QTL 16917.610.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)5116702075161702075Rat
8694389Bw160Body weight QTL 1606.170.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)5116702075161702075Rat
8694198Abfw3Abdominal fat weight QTL 316.130.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)5116702075161702075Rat
1298090Bp155Blood pressure QTL 1553.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)5156289283171137955Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5133081618172190305Rat

Markers in Region
RH130064  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25154,325,888 - 154,326,073 (+)MAPPERmRatBN7.2
Rnor_6.05160,570,544 - 160,570,728NCBIRnor6.0
Rnor_5.05164,281,894 - 164,282,078UniSTSRnor5.0
RGSC_v3.45160,938,705 - 160,938,889UniSTSRGSC3.4
Celera5152,676,033 - 152,676,217UniSTS
Cytogenetic Map5q36UniSTS
RH132592  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25154,352,869 - 154,353,088 (+)MAPPERmRatBN7.2
Rnor_6.05160,597,315 - 160,597,533NCBIRnor6.0
Rnor_5.05164,308,475 - 164,308,693UniSTSRnor5.0
RGSC_v3.45160,965,655 - 160,965,873UniSTSRGSC3.4
Celera5152,702,695 - 152,702,913UniSTS
RH 3.4 Map51055.9UniSTS
Cytogenetic Map5q36UniSTS
BF386229  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25154,329,173 - 154,329,350 (+)MAPPERmRatBN7.2
Rnor_6.05160,573,829 - 160,574,005NCBIRnor6.0
Rnor_5.05164,285,179 - 164,285,355UniSTSRnor5.0
RGSC_v3.45160,941,990 - 160,942,166UniSTSRGSC3.4
Celera5152,679,318 - 152,679,494UniSTS
RH 3.4 Map51057.6UniSTS
Cytogenetic Map5q36UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 160 91 90 59 87 59 6 351 187 11 138 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000019171   ⟹   ENSRNOP00000019171
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl5159,608,866 - 159,658,891 (-)Ensembl
mRatBN7.2 Ensembl5154,325,856 - 154,375,882 (-)Ensembl
Rnor_6.0 Ensembl5160,570,511 - 160,620,334 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000089981   ⟹   ENSRNOP00000072618
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl5160,570,502 - 160,619,650 (-)Ensembl
RefSeq Acc Id: NM_001109273   ⟹   NP_001102743
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85159,608,866 - 159,658,891 (-)NCBI
mRatBN7.25154,325,856 - 154,375,882 (-)NCBI
Rnor_6.05160,570,511 - 160,620,334 (-)NCBI
Rnor_5.05164,280,429 - 164,331,199 (-)NCBI
RGSC_v3.45160,938,672 - 160,988,578 (-)RGD
Celera5152,676,000 - 152,726,010 (-)RGD
Sequence:
RefSeq Acc Id: XM_006239313   ⟹   XP_006239375
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85159,608,865 - 159,658,310 (-)NCBI
mRatBN7.25154,325,853 - 154,375,250 (-)NCBI
Rnor_6.05160,570,510 - 160,619,597 (-)NCBI
Rnor_5.05164,280,429 - 164,331,199 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006239314   ⟹   XP_006239376
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85159,608,865 - 159,658,918 (-)NCBI
mRatBN7.25154,326,509 - 154,375,687 (-)NCBI
Rnor_6.05160,571,164 - 160,620,647 (-)NCBI
Rnor_5.05164,280,429 - 164,331,199 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006239315   ⟹   XP_006239377
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85159,608,865 - 159,658,299 (-)NCBI
mRatBN7.25154,326,509 - 154,375,042 (-)NCBI
Rnor_6.05160,571,164 - 160,619,282 (-)NCBI
Rnor_5.05164,280,429 - 164,331,199 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063288298   ⟹   XP_063144368
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85159,608,865 - 159,658,886 (-)NCBI
RefSeq Acc Id: XM_063288299   ⟹   XP_063144369
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85159,608,865 - 159,628,841 (-)NCBI
RefSeq Acc Id: NP_001102743   ⟸   NM_001109273
- UniProtKB: D4AE69 (UniProtKB/TrEMBL),   A6ITY1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006239376   ⟸   XM_006239314
- Peptide Label: isoform X1
- UniProtKB: D4AE69 (UniProtKB/TrEMBL),   A6ITY1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006239375   ⟸   XM_006239313
- Peptide Label: isoform X1
- UniProtKB: D4AE69 (UniProtKB/TrEMBL),   A6ITY1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006239377   ⟸   XM_006239315
- Peptide Label: isoform X1
- UniProtKB: D4AE69 (UniProtKB/TrEMBL),   A6ITY1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000072618   ⟸   ENSRNOT00000089981
Ensembl Acc Id: ENSRNOP00000019171   ⟸   ENSRNOT00000019171
RefSeq Acc Id: XP_063144368   ⟸   XM_063288298
- Peptide Label: isoform X1
- UniProtKB: A6ITY1 (UniProtKB/TrEMBL),   D4AE69 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063144369   ⟸   XM_063288299
- Peptide Label: isoform X1
- UniProtKB: A6ITY1 (UniProtKB/TrEMBL),   D4AE69 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4AE69-F1-model_v2 AlphaFold D4AE69 1-249 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694247
Promoter ID:EPDNEW_R4764
Type:initiation region
Name:Tmem51_1
Description:transmembrane protein 51
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.05160,619,697 - 160,619,757EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1565452 AgrOrtholog
BioCyc Gene G2FUF-39324 BioCyc
Ensembl Genes ENSRNOG00000014197 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000019171 ENTREZGENE
  ENSRNOT00000019171.7 UniProtKB/TrEMBL
InterPro TMEM51 UniProtKB/TrEMBL
KEGG Report rno:500578 UniProtKB/TrEMBL
NCBI Gene 500578 ENTREZGENE
PANTHER PTHR16015 UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN 51 UniProtKB/TrEMBL
Pfam TMEM51 UniProtKB/TrEMBL
PhenoGen Tmem51 PhenoGen
RatGTEx ENSRNOG00000014197 RatGTEx
UniProt A6ITY1 ENTREZGENE, UniProtKB/TrEMBL
  D4AE69 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-06 Tmem51  transmembrane protein 51  RGD1565452_predicted  similar to BC003277 protein (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1565452_predicted  similar to BC003277 protein (predicted)  LOC500578  similar to BC003277 protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC500578  similar to BC003277 protein      Symbol and Name status set to provisional 70820 PROVISIONAL