Lonrf3 (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | X | 120,430,975 - 120,469,648 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | X | 120,430,996 - 120,464,572 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | X | 115,565,214 - 115,603,886 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 115,565,267 - 115,598,809 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | X | 117,666,080 - 117,699,622 (+) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 121,235,236 - 121,268,768 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 118,781,366 - 118,814,905 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 122,937,987 - 122,973,289 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 122,938,009 - 122,973,321 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | X | 123,088,000 - 123,121,296 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | X | 8,567,873 - 8,601,662 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | X | 114,799,529 - 114,833,063 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q34 | NCBI | | | | |
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LONRF3 (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | X | 118,974,614 - 119,018,355 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 118,974,614 - 119,022,925 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | X | 118,108,577 - 118,152,318 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 117,992,741 - 118,035,978 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | X | 117,890,462 - 117,933,829 | NCBI | | | | | Celera | X | 118,563,552 - 118,606,769 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q24 | NCBI | | | | | HuRef | X | 107,601,847 - 107,645,056 (+) | NCBI | | HuRef | | | CHM1_1 | X | 118,019,598 - 118,062,840 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 117,352,354 - 117,396,078 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Lonrf3 (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | X | 35,592,011 - 35,630,510 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 35,592,006 - 35,625,994 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | X | 36,328,358 - 36,366,857 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 36,328,353 - 36,362,341 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | X | 33,868,404 - 33,906,851 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 32,759,854 - 32,798,301 (+) | NCBI | | MGSCv36 | mm8 | | Celera | X | 23,057,065 - 23,095,512 (+) | NCBI | | Celera | | | Cytogenetic Map | X | A3.3 | NCBI | | | | | cM Map | X | 20.72 | NCBI | | | | |
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Lonrf3 (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955534 | 979,399 - 1,016,626 (-) | Ensembl | | | | | ChiLan1.0 | NW_004955534 | 979,399 - 1,016,626 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LONRF3 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | X | 118,332,903 - 118,381,437 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 118,336,515 - 118,385,041 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 107,981,907 - 108,026,549 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 118,446,872 - 118,490,198 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 118,447,033 - 118,490,198 (+) | Ensembl | | | panPan2 | panpan1.1 |
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LONRF3 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | X | 91,105,938 - 91,146,468 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | X | 91,106,496 - 91,141,790 (+) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | X | 77,180,108 - 77,220,266 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | X | 92,844,627 - 92,884,791 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 92,844,813 - 92,884,410 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | X | 90,297,738 - 90,337,893 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 92,056,439 - 92,096,577 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 91,784,878 - 91,825,040 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Lonrf3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | X | 90,107,900 - 90,146,869 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936479 | 10,840,448 - 10,879,906 (-) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936479 | 10,840,630 - 10,880,494 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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LONRF3 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | X | 97,494,328 - 97,534,185 (+) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | X | 97,494,305 - 97,547,813 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | X | 114,089,552 - 114,141,833 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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LONRF3 (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Vero_WHO_p1.0 | NW_023666065 | 31,721,739 - 31,766,666 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Lonrf3 (Heterocephalus glaber - naked mole-rat) |
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Lonrf3 (Rattus rattus - black rat) |
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