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Gene: Pwwp3b (PWWP domain containing 3B) Rattus norvegicus

Analyze

Symbol:

Pwwp3b

Name:

PWWP domain containing 3B

RGD ID:

1565148

Description:

Orthologous to human PWWP3B (PWWP domain containing 3B); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC501630; melanoma associated antigen (mutated) 1-like 1; MUM1 like 1; Mum1l1; PWWP domain-containing DNA repair factor 3B; PWWP domain-containing protein MUM1L1; RGD1565148; similar to melanoma associated antigen (mutated) 1-like 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PWWP3B (PWWP domain containing 3B)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Pwwp3b (PWWP domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Pwwp3b (PWWP domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PWWP3B (PWWP domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PWWP3B (PWWP domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pwwp3b (PWWP domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PWWP3B (PWWP domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PWWP3B (PWWP domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pwwp3b (PWWP domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Pwwp3b (PWWP domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	CD46 (CD46 molecule)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	PWWP3B (PWWP domain containing 3B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PWWP3B (PWWP domain containing 3B)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Pwwp3b (PWWP domain containing 3B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Pwwp3b (PWWP domain containing 3B)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:dkey-127k13.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:dkey-127k13.1	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	pwwp3a	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	pwwp3a	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	107,593,062 - 107,627,215 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	107,582,676 - 107,627,803 (+)	Ensembl				GRCr8
mRatBN7.2	X	102,804,416 - 102,838,580 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	102,804,520 - 102,838,574 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	104,967,304 - 104,971,099 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	108,466,051 - 108,469,846 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	106,037,460 - 106,041,255 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	110,375,434 - 110,411,221 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	110,404,022 - 110,411,039 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	110,414,581 - 110,450,324 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	126,912,086 - 126,915,881 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	X	103,600,510 - 103,604,305 (+)	NCBI		Celera
Cytogenetic Map	X	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

factor VIII deficiency (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (EXP,ISO)

17beta-estradiol 3-benzoate (EXP)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP,ISO)

afimoxifene (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

Butylbenzyl phthalate (ISO)

cadmium dichloride (ISO)

CGP 52608 (ISO)

chlordecone (ISO)

chlorpyrifos (ISO)

cyclosporin A (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

ethanol (ISO)

folic acid (ISO)

furan (EXP)

glycidol (EXP)

glyphosate (EXP)

iron dichloride (ISO)

methylmercury chloride (ISO)

monosodium L-glutamate (ISO)

okadaic acid (ISO)

paracetamol (EXP,ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

progesterone (ISO)

SB 431542 (ISO)

silver atom (ISO)

silver(0) (ISO)

Soman (EXP)

sunitinib (ISO)

testosterone (EXP)

tetrachloromethane (ISO)

thioacetamide (EXP)

trichostatin A (ISO)

triptonide (ISO)

valproic acid (ISO)

vorinostat (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:19056867	PMID:19755419

Genomics

Comparative Map Data

Pwwp3b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	107,593,062 - 107,627,215 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	107,582,676 - 107,627,803 (+)	Ensembl				GRCr8
mRatBN7.2	X	102,804,416 - 102,838,580 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	102,804,520 - 102,838,574 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	104,967,304 - 104,971,099 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	108,466,051 - 108,469,846 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	106,037,460 - 106,041,255 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	110,375,434 - 110,411,221 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	110,404,022 - 110,411,039 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	110,414,581 - 110,450,324 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	126,912,086 - 126,915,881 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	X	103,600,510 - 103,604,305 (+)	NCBI		Celera
Cytogenetic Map	X	q32	NCBI

PWWP3B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	106,168,305 - 106,208,956 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	106,168,304 - 106,208,963 (+)	Ensembl			hg38	GRCh38
GRCh37	X	105,412,298 - 105,452,949 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	105,307,975 - 105,339,604 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	X	105,227,463 - 105,259,093	NCBI
Celera	X	105,886,895 - 105,927,546 (+)	NCBI		Celera
Cytogenetic Map	X	q22.3	NCBI
HuRef	X	95,038,043 - 95,078,595 (+)	NCBI		HuRef
CHM1_1	X	105,323,601 - 105,364,259 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	104,600,239 - 104,640,937 (+)	NCBI		T2T-CHM13v2.0

Pwwp3b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	138,110,726 - 138,139,084 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	138,110,791 - 138,139,084 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	X	139,209,977 - 139,238,335 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	139,210,042 - 139,238,335 (+)	Ensembl			mm10	GRCm38
MGSCv37	X	135,744,583 - 135,772,874 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	X	134,581,349 - 134,584,696 (+)	NCBI		MGSCv36	mm8
Celera	X	122,478,656 - 122,507,180 (+)	NCBI		Celera
Cytogenetic Map	X	F1	NCBI
cM Map	X	61.29	NCBI

Pwwp3b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955548	2,948,340 - 2,950,403 (+)	Ensembl
ChiLan1.0	NW_004955548	2,904,964 - 2,951,956 (+)	NCBI	ChiLan1.0	ChiLan1.0

PWWP3B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	105,679,445 - 105,714,291 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	105,683,046 - 105,717,892 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	95,296,558 - 95,331,414 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	105,675,004 - 105,709,834 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2

PWWP3B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	79,711,174 - 79,737,600 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	65,855,764 - 65,882,147 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	81,343,871 - 81,370,288 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	81,343,894 - 81,370,407 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	78,825,993 - 78,852,408 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	80,533,922 - 80,560,302 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	80,305,594 - 80,331,999 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Pwwp3b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	79,161,233 - 79,197,953 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936499	8,461,475 - 8,463,553 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936499	8,459,934 - 8,496,670 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PWWP3B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	86,785,325 - 86,814,625 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	X	86,785,317 - 86,814,631 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	101,143,244 - 101,172,529 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PWWP3B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	94,049,013 - 94,077,850 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	94,074,331 - 94,076,412 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666065	19,083,511 - 19,112,313 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pwwp3b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624803	10,508,247 - 10,510,307 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624803	10,506,662 - 10,536,854 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Pwwp3b
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	X	93,618,621 - 93,622,454 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Pwwp3b
371 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	423
Count of miRNA genes:	234
Interacting mature miRNAs:	302
Transcripts:	ENSRNOT00000041044
Prediction methods:	Miranda, Pita, Pita,Targetscan, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1598872	Memor14	Memory QTL 14	4.5		exploratory behavior trait (VT:0010471)	difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	X	97528096	142528096	Rat
738025	Stresp3	Stress response QTL 3	4.61	0.0066	stress-related behavior trait (VT:0010451)	defensive burying - approach	X	105359969	157758123	Rat
61430	Cia18	Collagen induced arthritis QTL 18	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	X	80434318	125434318	Rat
738029	Stresp2	Stress response QTL 2	3.4	0.0004	stress-related behavior trait (VT:0010451)	defensive burying - approach	X	92979612	117740458	Rat
61431	Cia19	Collagen induced arthritis QTL 19	4.4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	X	105468858	125434318	Rat
738035	Stresp1	Stress response QTL 1	4.96	0.000011	stress-related behavior trait (VT:0010451)	defensive burying - coping	X	45182909	117740458	Rat
2302047	Pia34	Pristane induced arthritis QTL 34	5.8	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	19	96916163	141916163	Rat

Markers in Region

Mum1l1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	102,836,173 - 102,836,291 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	110,408,815 - 110,408,932	NCBI	Rnor6.0
Rnor_5.0	X	110,447,918 - 110,448,035	UniSTS	Rnor5.0
RGSC_v3.4	X	126,913,481 - 126,913,598	UniSTS	RGSC3.4
Celera	X	103,601,905 - 103,602,022	UniSTS
Cytogenetic Map	X	q35	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	11	67	143	89	88	57	25	57	6	280	124	10	121	75	92	31	14	14

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001109321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434346	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434347	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434348	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257301	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257303	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257304	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602135	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280255	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280256	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280257	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC168654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474076	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000041044 ⟹ ENSRNOP00000043912

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	107,600,779 - 107,627,081 (+)	Ensembl
mRatBN7.2 Ensembl	X	102,833,977 - 102,838,388 (+)	Ensembl
Rnor_6.0 Ensembl	X	110,404,022 - 110,411,039 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100602 ⟹ ENSRNOP00000079665

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	107,593,849 - 107,627,220 (+)	Ensembl
mRatBN7.2 Ensembl	X	102,804,520 - 102,838,574 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118449 ⟹ ENSRNOP00000078429

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	107,599,996 - 107,627,220 (+)	Ensembl
mRatBN7.2 Ensembl	X	102,817,082 - 102,838,574 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000122225 ⟹ ENSRNOP00000109839

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	107,616,314 - 107,627,292 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000123268 ⟹ ENSRNOP00000107757

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	107,592,906 - 107,627,803 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000140999 ⟹ ENSRNOP00000105135

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	107,593,100 - 107,627,292 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000148770 ⟹ ENSRNOP00000110466

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	107,582,676 - 107,627,803 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000151909 ⟹ ENSRNOP00000100798

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	107,614,888 - 107,627,803 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000157017 ⟹ ENSRNOP00000111756

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	107,599,803 - 107,627,292 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000164023 ⟹ ENSRNOP00000112100

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	107,599,892 - 107,627,292 (+)	Ensembl

RefSeq Acc Id:

NM_001109321 ⟹ NP_001102791

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	107,623,419 - 107,627,214 (+)	NCBI
mRatBN7.2	X	102,834,779 - 102,838,574 (+)	NCBI
Rnor_6.0	X	110,407,420 - 110,411,215 (+)	NCBI
Rnor_5.0	X	110,414,581 - 110,450,324 (+)	NCBI
RGSC_v3.4	X	126,912,086 - 126,915,881 (+)	RGD
Celera	X	103,600,510 - 103,604,305 (+)	RGD

Sequence:

show sequence

TGGGGACATATCTGTGGAAGAAAACGGTGCACATAAGCTATAAACTCTTTGTGGTTCTAAATCA
AAAAGAAACGTTACTAAGACTGGTGTTTTGATAGCACTTGTATTTGCAGCCACAAGGCTAGCCA
ATCTCTTTGTCTGTAATACTAACTACTTGGCACATTAATCTAAATCATAATGGATGGTGAATAT
GTCCTATGTAGTTGGAAAGACCAATTATGGCCAGCCAAAGTTTTAGATAGGTCTGAAAGTCCTT
CAGACAGTAAGAGGAAAAAGACATTGTCTGTAGAAGTTGAAATACTTTCACTGGATGAGAAAAT
TACCGTGGAAAGCAAAGACACAAAAGTCCTAACCAAATCTGCTGTCGAAGCCATTATGTCCTCT
CTAACAGTGCAGTCAGAGGTCAGCTTTACACCTACGGAGGAAACTGCCTATGAAAGATCACTGA
AAATGGCACTGGAAATCGTGGAAGAAAGAACAAATCAGAGCCACGAAAGCATGGCAGAAGAGCA
ACATATGGCTACAGCATCTGAAAATGTGCCACAGCAGCCGCCTGATTCGCCTCCTCATAAAAAG
TTCCGGAAACTCGAAAGCAACCTCCAGGAAGACTCGGCTTCCATGTTGCTGTGCTCCGAGAGTG
ATGATTCCCTCTCCGACGAGAAGTTGCAGGTGCACACAACCAGTGAGAACATGCCAAGTGAAGT
GGAAATGAAGTCAGAAAACTTAAGCTGCTGCCAAACGTACCCTTCCTTTTCAGATGATGATGAT
AAAAAAGAAGAAAAGAAAAAGATTGACATCTCGGCGATCATGTCTGTGAATTTATCGCTCAAAG
AAGAAAGCGAATTTATTAAAGAAGAAAAGTTTGTCCCCTCATCAGAAGATCTCGCTGTACCCAA
AGAGGAGTCCCAAGACATCCTCCCAGATGCCCCGGCTGTTTCCTCTGAATGCTTTATTGTCTCA
GAGAATAACATGGAAGATCCTGGAGAGGGCCCATCAAATCAGAATCCAGGTTCCTATGGCAGCC
AAAGTCAGTCTACTGTGGAATCAGATGTAGGTGCTGAGACATCCACTGCAGGGTGCTCAGGGGA
CTATCAGGTTTCCCTTCCTGCCCGTGATACAGTCAACAGTGATCTACTACTCCAGAGACTGGAT
TTAGAAGATCTTGAGGAAGAAGCCCGAGCTTCTGGCAAGCTTTTGTCTCTAAATCCTGCCTGTG
CGGCTGCGTTAGAAAATGATGATGAGGACGACGATGAAGACCTTCCACGTTTCATCCTCCGTTA
TGAGACACGTGCATTTGAAACCGGCATGATAGTGTGGTTTAAATATCAAAAATACCCATTTTGG
CCAGCAGTGATCAAAAGCATCAGGCGGAAAGAGAGGAAAGCGAGTGTGCTTTTGGTTGAGGCAG
ACATGAATCCTCAAAAGAGAGGCGTTAGAGTATCTTTGAGAAGGCTGAAAAAATATGACTGTAA
AGAGAAACAGGCACTAGTGGAGAAAGCCAGGGAGGAGTACAAGGAGAGCATTGATTGGTGCGTG
TCGCTGATTTGTGACTACCGAGTTAGACTAGGCTGTGGTTCTTTTACTGGTTCATTCTTTGAGT
ATTACGCTGCTGACATCAGTTACCCGGTCAGGAAAATCATCAAACAAGATACGTTCAGAAATAT
ATTTCCAAAGCTATACAATGAAGACGCGGGGGAGCAATTGCCTGTGGCATCTCACGCCAAGAGA
GTATCTTTCCGGAAAATTCTCCCTGATCGCATGAAGCCTGCTCGGGACCGAGCTAACAAGAACC
TTGTAGATTTCATTGTCAATGCAAAAGGAACTGAGGACCACCTCCTGGGAATTTTAAAGGGCAC
AAAAAAATCCAAGTGGCTGAAATCATTTCTGAATGCAAAGAGTTTCACACCCTGTATTGAAACC
TACTTTGAAGACGAAGATCAACTGGATGAAGTGGTGAAATATCTACAAGAAATTTATAAGCAAA
TTGACCAGAAGATGCTGACTCTGATAAAAGATGACAAAATTAAGTTTGTCTTGGAAGTTCTTCT
ACCCGAAGCAATTATTTGCTCAATTTCTGCAGTTGATGGCTTAGATTATGAAGCAGCGGAGGCA
AAGTATCTAAAGGGACCATCCCTTGGCTATAGGGAGAGAGAATTATATGATTCCAAAATCCTAT
TTGAAAAGAGGCGGAGGTCATTACCAAATGAAGGTCGTTAATTATGCCAAGAGTTGAAACCAAA
ATGGAAACTAGATGAAACTTTGGAAAAGTAATCTTCTAAAAGTTCCAATGCATAAATATTTGCT
GAAAATGAAGGGAGGGTCCTTGAATTCTAAGTTCTTTTATTTTTTGAAGATCCATGTGATCCGC
AAATACCAATACATCCACCTTTATTTTCTTGTGCTTTTTCAGATTCAGCTTTATCAGTATATTT
TTAGCAGTTTTTCTAATATATTTTGGAATGCATAATTCTTAGGCAACTTTAGGGGGAACTGTTA
CTTTGTTTTATGATATTTTGGTGTCTTTGCTGTATAGGTAAATACATTATGTACATTCAGTTCA
ATAAAACTGCACTGGTGTTAGATTTTAAGCAAGAGAATTAGAAGAGATGTCTAAAACAAATACC
AGTTATATATTTTTTTGGTCAATTTTTTTATAAAGTACTGACTTTTCTCTTAAGATAGCCAATT
TATTTTTCCTGCCATGCCTATTTATTTTTGGGAAAAAATATCTCTAAATCATAGAACCAAAGAT
AGATTAAAATTTGCCACATATATACAACTAACCACAATTGCTTCTGCAAGAAAACAATCTAAAA
TTAAAAAGTAAATGGGTTATCCACATGTAATCTATCTGAGTGTACGTATGTTTATAACACCTCA
GCATGCAGAAAATGATTGTTCATTGTACACTTCTCTGAAATTCTAGTTTGAGGAGTGTCTGTCG
TTCAGTGCTGAATAATTTCTAAAACAGATAAACTTCTGGCTATCTTCATTATCATGAGTAGATC
ATAATATAGCAATTTGAGTACATGTAGAAGACAGTTAAAATGAGCGTGTCAACAGTCTAGCCAC
CCTACAGTCCAGGGTTGCTGCTTCATATCCTTCTAGTTTGATATAAAGTAAGAAAAGCAAGCAC
TGTGTTCAGTCCTTTCTCCGAATATAAAGTCATTTGTCTCCAACCAAGCAAGCTTTAGCATCTG
GCTTATTTCTAGAACGGTTCCAATTGGTTCCAGTAACATAATTGCCAACTGGTTAATCATTCCA
ACATACTAGATGGACCAGTATCTGGGAAATTGGAAAAATGTTACAGCAAAAGTTCTTTACTTGC
TACATGTGGCCGTTATTCTGTATATGGTTATGTATACAAAATTAGTCGTTCTTGTAACTTGAAA
CAAGATTTTTTTTATAAGACTAAATCTTAGAAAAGCTAGTATATTTAAAAAAAATTAATGTGAA
AAGGTGTACTAAGGGCTTAACACAAACCTATCTCCATTTTTACCTCACAGAGTGAGGCAACTTT
CACTCTTGGGCTCTTTTGTGTTCATCTCACACAGCTCTGTGTTTATGTACAATTTGCAGAATTT
TGGTATTTGATTTATAATAAAGCTCTCATATCTTTCACTTTAGATGTTCATTTCACTTTAGATA
TATAGAGACATTGTGGTGTTTGTGTAAATGAATATATGTACAAGCATATATATCTACATGCACA
CACAATTCATTTAAAACTTGTAAGTGTTGTCATCATTTAACTCTTGTTATAAGTTGTCATTCTA
AATAAATGCCCACTTTCAGG

hide sequence

RefSeq Acc Id:

XM_006257301 ⟹ XP_006257363

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	107,593,084 - 107,627,215 (+)	NCBI
mRatBN7.2	X	102,804,420 - 102,838,580 (+)	NCBI
Rnor_6.0	X	110,375,434 - 110,411,221 (+)	NCBI
Rnor_5.0	X	110,414,581 - 110,450,324 (+)	NCBI

Sequence:

show sequence

GCGGGCGGCCACTCGCTCGGGGCTCGCATGGGATACACATTTTTTCGTGAGGTTCAGACTGCTT
AAGGGAGAGCCGCGGTGGCCAAGTGGCGGCAGCGGCTGCGGCGGCGGTGGCTGCGGCGGCGGCG
GGCTCCAGAGGCTGCGTCTTCAGGCCTGTCCTGGAAGTAGGTGTTTTTGGAGATTTGTAGAAGA
TTTCGGTGTGAAAGTCCTGCCTTTGGTACCACTTGTGACCAGAAAAGCAGTGCAGCCGTACAAG
GACCCAGAAGGGTGAGGGCTCTGCTGGGCAAACAGCTAAAGTGTGACTCAAAACAGCTGGACCA
TAGTGTCAGACTACCAGAGAGCCTGTGACAGAGGGGAGTGGCCTTCAGCTCTGCGTCACCGTGG
AGGCCGAGCCTTCTTTGAGCAGCGCCTGTGAGTTCTGGCTTGCCAGCCTCGGGGGAGGAGCTGC
ATTTTAGCAGGCTGCAGCTGACAAGAAGCTTCAAGAGGTGTCTTGAGATTGGAGTGACTCCAGA
AAGGCAGCGTAACTACATACGTGCCCCACAGGGTGAAAGACCTGTTTGGAAGTCAGCTGGCGTG
AGGGTCACACAGCCAGACTACCTACCAGTGTACCAAACAGAGTATCTTCCAGAGTTCTCTTATT
CAAACAACATGTTCAAGTATCCTGGGGACATATCTGTGGAAGAAAACGGTGCACATAAGCTATA
AACTCTTTGTGGTTCTAAATCAAAAAGAAACGTTACTAAGACTGGTGTTTTGATAGCACTTGTA
TTTGCAGCCACAAGGCTAGCCAATCTCTTTGTCTGTAATACTAACTACTTGGCACATTAATCTA
AATCATAATGGATGGTGAATATGTCCTATGTAGTTGGAAAGACCAATTATGGCCAGCCAAAGTT
TTAGATAGGTCTGAAAGTCCTTCAGACAGTAAGAGGAAAAAGACATTGTCTGTAGAAGTTGAAA
TACTTTCACTGGATGAGAAAATTACCGTGGAAAGCAAAGACACAAAAGTCCTAACCAAATCTGC
TGTCGAAGCCATTATGTCCTCTCTAACAGTGCAGTCAGAGGTCAGCTTTACACCTACGGAGGAA
ACTGCCTATGAAAGATCACTGAAAATGGCACTGGAAATCGTGGAAGAAAGAACAAATCAGAGCC
ACGAAAGCATGGCAGAAGAGCAACATATGGCTACAGCATCTGAAAATGTGCCACAGCAGCCGCC
TGATTCGCCTCCTCATAAAAAGTTCCGGAAACTCGAAAGCAACCTCCAGGAAGACTCGGCTTCC
ATGTTGCTGTGCTCCGAGAGTGATGATTCCCTCTCCGACGAGAAGTTGCAGGTGCACACAACCA
GTGAGAACATGCCAAGTGAAGTGGAAATGAAGTCAGAAAACTTAAGCTGCTGCCAAACGTACCC
TTCCTTTTCAGATGATGATGATAAAAAAGAAGAAAAGAAAAAGATTGACATCTCGGCGATCATG
TCTGTGAATTTATCGCTCAAAGAAGAAAGCGAATTTATTAAAGAAGAAAAGTTTGTCCCCTCAT
CAGAAGATCTCGCTGTACCCAAAGAGGAGTCCCAAGACATCCTCCCAGATGCCCCGGCTGTTTC
CTCTGAATGCTTTATTGTCTCAGAGAATAACATGGAAGATCCTGGAGAGGGCCCATCAAATCAG
AATCCAGGTTCCTATGGCAGCCAAAGTCAGTCTACTGTGGAATCAGATGTAGGTGCTGAGACAT
CCACTGCAGGGTGCTCAGGGGACTATCAGGTTTCCCTTCCTGCCCGTGATACAGTCAACAGTGA
TCTACTACTCCAGAGACTGGATTTAGAAGATCTTGAGGAAGAAGCCCGAGCTTCTGGCAAGCTT
TTGTCTCTAAATCCTGCCTGTGCGGCTGCGTTAGAAAATGATGATGAGGACGACGATGAAGACC
TTCCACGTTTCATCCTCCGTTATGAGACACGTGCATTTGAAACCGGCATGATAGTGTGGTTTAA
ATATCAAAAATACCCATTTTGGCCAGCAGTGATCAAAAGCATCAGGCGGAAAGAGAGGAAAGCG
AGTGTGCTTTTGGTTGAGGCAGACATGAATCCTCAAAAGAGAGGCGTTAGAGTATCTTTGAGAA
GGCTGAAAAAATATGACTGTAAAGAGAAACAGGCACTAGTGGAGAAAGCCAGGGAGGAGTACAA
GGAGAGCATTGATTGGTGCGTGTCGCTGATTTGTGACTACCGAGTTAGACTAGGCTGTGGTTCT
TTTACTGGTTCATTCTTTGAGTATTACGCTGCTGACATCAGTTACCCGGTCAGGAAAATCATCA
AACAAGATACGTTCAGAAATATATTTCCAAAGCTATACAATGAAGACGCGGGGGAGCAATTGCC
TGTGGCATCTCACGCCAAGAGAGTATCTTTCCGGAAAATTCTCCCTGATCGCATGAAGCCTGCT
CGGGACCGAGCTAACAAGAACCTTGTAGATTTCATTGTCAATGCAAAAGGAACTGAGGACCACC
TCCTGGGAATTTTAAAGGGCACAAAAAAATCCAAGTGGCTGAAATCATTTCTGAATGCAAAGAG
TTTCACACCCTGTATTGAAACCTACTTTGAAGACGAAGATCAACTGGATGAAGTGGTGAAATAT
CTACAAGAAATTTATAAGCAAATTGACCAGAAGATGCTGACTCTGATAAAAGATGACAAAATTA
AGTTTGTCTTGGAAGTTCTTCTACCCGAAGCAATTATTTGCTCAATTTCTGCAGTTGATGGCTT
AGATTATGAAGCAGCGGAGGCAAAGTATCTAAAGGGACCATCCCTTGGCTATAGGGAGAGAGAA
TTATATGATTCCAAAATCCTATTTGAAAAGAGGCGGAGGTCATTACCAAATGAAGGTCGTTAAT
TATGCCAAGAGTTGAAACCAAAATGGAAACTAGATGAAACTTTGGAAAAGTAATCTTCTAAAAG
TTCCAATGCATAAATATTTGCTGAAAATGAAGGGAGGGTCCTTGAATTCTAAGTTCTTTTATTT
TTTGAAGATCCATGTGATCCGCAAATACCAATACATCCACCTTTATTTTCTTGTGCTTTTTCAG
ATTCAGCTTTATCAGTATATTTTTAGCAGTTTTTCTAATATATTTTGGAATGCATAATTCTTAG
GCAACTTTAGGGGGAACTGTTACTTTGTTTTATGATATTTTGGTGTCTTTGCTGTATAGGTAAA
TACATTATGTACATTCAGTTCAATAAAACTGCACTGGTGTTAGATTTTAAGCAAGAGAATTAGA
AGAGATGTCTAAAACAAATACCAGTTATATATTTTTTTGGTCAATTTTTTTATAAAGTACTGAC
TTTTCTCTTAAGATAGCCAATTTATTTTTCCTGCCATGCCTATTTATTTTTGGGAAAAAATATC
TCTAAATCATAGAACCAAAGATAGATTAAAATTTGCCACATATATACAACTAACCACAATTGCT
TCTGCAAGAAAACAATCTAAAATTAAAAAGTAAATGGGTTATCCACATGTAATCTATCTGAGTG
TACGTATGTTTATAACACCTCAGCATGCAGAAAATGATTGTTCATTGTACACTTCTCTGAAATT
CTAGTTTGAGGAGTGTCTGTCGTTCAGTGCTGAATAATTTCTAAAACAGATAAACTTCTGGCTA
TCTTCATTATCATGAGTAGATCATAATATAGCAATTTGAGTACATGTAGAAGACAGTTAAAATG
AGCGTGTCAACAGTCTAGCCACCCTACAGTCCAGGGTTGCTGCTTCATATCCTTCTAGTTTGAT
ATAAAGTAAGAAAAGCAAGCACTGTGTTCAGTCCTTTCTCCGAATATAAAGTCATTTGTCTCCA
ACCAAGCAAGCTTTAGCATCTGGCTTATTTCTAGAACGGTTCCAATTGGTTCCAGTAACATAAT
TGCCAACTGGTTAATCATTCCAACATACTAGATGGACCAGTATCTGGGAAATTGGAAAAATGTT
ACAGCAAAAGTTCTTTACTTGCTACATGTGGCCGTTATTCTGTATATGGTTATGTATACAAAAT
TAGTCGTTCTTGTAACTTGAAACAAGATTTTTTTTATAAGACTAAATCTTAGAAAAGCTAGTAT
ATTTAAAAAAAATTAATGTGAAAAGGTGTACTAAGGGCTTAACACAAACCTATCTCCATTTTTA
CCTCACAGAGTGAGGCAACTTTCACTCTTGGGCTCTTTTGTGTTCATCTCACACAGCTCTGTGT
TTATGTACAATTTGCAGAATTTTGGTATTTGATTTATAATAAAGCTCTCATATCTTTCACTTTA
GATGTTCATTTCACTTTAGATATATAGAGACATTGTGGTGTTTGTGTAAATGAATATATGTACA
AGCATATATATCTACATGCACACACAATTCATTTAAAACTTGTAAGTGTTGTCATCATTTAACT
CTTGTTATAAGTTGTCATTCTAAATAAATGCCCACTTTCAGGATTGAA

hide sequence

RefSeq Acc Id:

XM_006257303 ⟹ XP_006257365

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	107,596,209 - 107,627,215 (+)	NCBI
mRatBN7.2	X	102,807,593 - 102,838,580 (+)	NCBI
Rnor_6.0	X	110,381,752 - 110,411,221 (+)	NCBI
Rnor_5.0	X	110,414,581 - 110,450,324 (+)	NCBI

Sequence:

show sequence

ACACACACACACCACAGCAAGTGGTGGAGGGAGCATAATATAACAACATCAGGACCAGGAAAAC
TAACCTTTCAAAGACTTAATTTCCCCCTAATAAGGTATTATTAATTCACCTCAATCACTAAGCG
GGCCATGGCAAATATTTTTAAGACATTTTGAGCAGCTGGACCTCAATTTAGTTTGCAGAAATAA
AGTGGCAGAATAGGCAAAACAAAACATTTTGTGTGTTGCAAAAGATATTCTTATCTAGGTCTTT
AATATATGTTAAAGATATTTCTGCATTTTTTTCAGGGAGGGAATCATCTGCCCTGATGCTTTGA
ATGCAAAGTAAAGGACACATGTTGCCTTTCTGCTTTCTAGCTTAAAAAAAAAAAGCCCATGTTT
TTCCTTTGCAGACTGTAACAAGTCTGAGTCTGAGTTGGCTTTCGCCCCTCCCCAGGGGCTCTTC
CCTGCAGCCCCCAGCACGAGAAGGGGCGGAGCTTATGCCTGCTGGTGGGAAGCGCGCAGCAGCG
CTCGTCCTGGGGGAGGGGTTGCACTTCTCAGGCGGCGGCGGCAGCAGCAGACTAGGAGCTAGGA
GCTATATATTTGACTGGCATGGAAGGCCTTCAGGATAATTAAAGCTGAGCCAAAGAGAGGAGTG
GCCTTCAGCTCTGCGTCACCGTGGAGGCCGAGCCTTCTTTGAGCAGCGCCTGTGAGTTCTGGCT
TGCCAGCCTCGGGGGAGGAGCTGCATTTTAGCAGGCTGCAGCTGACAAGAAGCTTCAAGAGGTG
TCTTGAGATTGGAGTGACTCCAGAAAGGCAGCGTAACTACATACGTGCCCCACAGGGTGAAAGA
CCTGTTTGGAAGTCAGCTGGCGTGAGGGTCACACAGCCAGACTACCTACCAGTGTACCAAACAG
AGTATCTTCCAGAGTTCTCTTATTCAAACAACATGTTCAAGTATCCTGGGGACATATCTGTGGA
AGAAAACGGTGCACATAAGCTATAAACTCTTTGTGGTTCTAAATCAAAAAGAAACGTTACTAAG
ACTGGTGTTTTGATAGCACTTGTATTTGCAGCCACAAGGCTAGCCAATCTCTTTGTCTGTAATA
CTAACTACTTGGCACATTAATCTAAATCATAATGGATGGTGAATATGTCCTATGTAGTTGGAAA
GACCAATTATGGCCAGCCAAAGTTTTAGATAGGTCTGAAAGTCCTTCAGACAGTAAGAGGAAAA
AGACATTGTCTGTAGAAGTTGAAATACTTTCACTGGATGAGAAAATTACCGTGGAAAGCAAAGA
CACAAAAGTCCTAACCAAATCTGCTGTCGAAGCCATTATGTCCTCTCTAACAGTGCAGTCAGAG
GTCAGCTTTACACCTACGGAGGAAACTGCCTATGAAAGATCACTGAAAATGGCACTGGAAATCG
TGGAAGAAAGAACAAATCAGAGCCACGAAAGCATGGCAGAAGAGCAACATATGGCTACAGCATC
TGAAAATGTGCCACAGCAGCCGCCTGATTCGCCTCCTCATAAAAAGTTCCGGAAACTCGAAAGC
AACCTCCAGGAAGACTCGGCTTCCATGTTGCTGTGCTCCGAGAGTGATGATTCCCTCTCCGACG
AGAAGTTGCAGGTGCACACAACCAGTGAGAACATGCCAAGTGAAGTGGAAATGAAGTCAGAAAA
CTTAAGCTGCTGCCAAACGTACCCTTCCTTTTCAGATGATGATGATAAAAAAGAAGAAAAGAAA
AAGATTGACATCTCGGCGATCATGTCTGTGAATTTATCGCTCAAAGAAGAAAGCGAATTTATTA
AAGAAGAAAAGTTTGTCCCCTCATCAGAAGATCTCGCTGTACCCAAAGAGGAGTCCCAAGACAT
CCTCCCAGATGCCCCGGCTGTTTCCTCTGAATGCTTTATTGTCTCAGAGAATAACATGGAAGAT
CCTGGAGAGGGCCCATCAAATCAGAATCCAGGTTCCTATGGCAGCCAAAGTCAGTCTACTGTGG
AATCAGATGTAGGTGCTGAGACATCCACTGCAGGGTGCTCAGGGGACTATCAGGTTTCCCTTCC
TGCCCGTGATACAGTCAACAGTGATCTACTACTCCAGAGACTGGATTTAGAAGATCTTGAGGAA
GAAGCCCGAGCTTCTGGCAAGCTTTTGTCTCTAAATCCTGCCTGTGCGGCTGCGTTAGAAAATG
ATGATGAGGACGACGATGAAGACCTTCCACGTTTCATCCTCCGTTATGAGACACGTGCATTTGA
AACCGGCATGATAGTGTGGTTTAAATATCAAAAATACCCATTTTGGCCAGCAGTGATCAAAAGC
ATCAGGCGGAAAGAGAGGAAAGCGAGTGTGCTTTTGGTTGAGGCAGACATGAATCCTCAAAAGA
GAGGCGTTAGAGTATCTTTGAGAAGGCTGAAAAAATATGACTGTAAAGAGAAACAGGCACTAGT
GGAGAAAGCCAGGGAGGAGTACAAGGAGAGCATTGATTGGTGCGTGTCGCTGATTTGTGACTAC
CGAGTTAGACTAGGCTGTGGTTCTTTTACTGGTTCATTCTTTGAGTATTACGCTGCTGACATCA
GTTACCCGGTCAGGAAAATCATCAAACAAGATACGTTCAGAAATATATTTCCAAAGCTATACAA
TGAAGACGCGGGGGAGCAATTGCCTGTGGCATCTCACGCCAAGAGAGTATCTTTCCGGAAAATT
CTCCCTGATCGCATGAAGCCTGCTCGGGACCGAGCTAACAAGAACCTTGTAGATTTCATTGTCA
ATGCAAAAGGAACTGAGGACCACCTCCTGGGAATTTTAAAGGGCACAAAAAAATCCAAGTGGCT
GAAATCATTTCTGAATGCAAAGAGTTTCACACCCTGTATTGAAACCTACTTTGAAGACGAAGAT
CAACTGGATGAAGTGGTGAAATATCTACAAGAAATTTATAAGCAAATTGACCAGAAGATGCTGA
CTCTGATAAAAGATGACAAAATTAAGTTTGTCTTGGAAGTTCTTCTACCCGAAGCAATTATTTG
CTCAATTTCTGCAGTTGATGGCTTAGATTATGAAGCAGCGGAGGCAAAGTATCTAAAGGGACCA
TCCCTTGGCTATAGGGAGAGAGAATTATATGATTCCAAAATCCTATTTGAAAAGAGGCGGAGGT
CATTACCAAATGAAGGTCGTTAATTATGCCAAGAGTTGAAACCAAAATGGAAACTAGATGAAAC
TTTGGAAAAGTAATCTTCTAAAAGTTCCAATGCATAAATATTTGCTGAAAATGAAGGGAGGGTC
CTTGAATTCTAAGTTCTTTTATTTTTTGAAGATCCATGTGATCCGCAAATACCAATACATCCAC
CTTTATTTTCTTGTGCTTTTTCAGATTCAGCTTTATCAGTATATTTTTAGCAGTTTTTCTAATA
TATTTTGGAATGCATAATTCTTAGGCAACTTTAGGGGGAACTGTTACTTTGTTTTATGATATTT
TGGTGTCTTTGCTGTATAGGTAAATACATTATGTACATTCAGTTCAATAAAACTGCACTGGTGT
TAGATTTTAAGCAAGAGAATTAGAAGAGATGTCTAAAACAAATACCAGTTATATATTTTTTTGG
TCAATTTTTTTATAAAGTACTGACTTTTCTCTTAAGATAGCCAATTTATTTTTCCTGCCATGCC
TATTTATTTTTGGGAAAAAATATCTCTAAATCATAGAACCAAAGATAGATTAAAATTTGCCACA
TATATACAACTAACCACAATTGCTTCTGCAAGAAAACAATCTAAAATTAAAAAGTAAATGGGTT
ATCCACATGTAATCTATCTGAGTGTACGTATGTTTATAACACCTCAGCATGCAGAAAATGATTG
TTCATTGTACACTTCTCTGAAATTCTAGTTTGAGGAGTGTCTGTCGTTCAGTGCTGAATAATTT
CTAAAACAGATAAACTTCTGGCTATCTTCATTATCATGAGTAGATCATAATATAGCAATTTGAG
TACATGTAGAAGACAGTTAAAATGAGCGTGTCAACAGTCTAGCCACCCTACAGTCCAGGGTTGC
TGCTTCATATCCTTCTAGTTTGATATAAAGTAAGAAAAGCAAGCACTGTGTTCAGTCCTTTCTC
CGAATATAAAGTCATTTGTCTCCAACCAAGCAAGCTTTAGCATCTGGCTTATTTCTAGAACGGT
TCCAATTGGTTCCAGTAACATAATTGCCAACTGGTTAATCATTCCAACATACTAGATGGACCAG
TATCTGGGAAATTGGAAAAATGTTACAGCAAAAGTTCTTTACTTGCTACATGTGGCCGTTATTC
TGTATATGGTTATGTATACAAAATTAGTCGTTCTTGTAACTTGAAACAAGATTTTTTTTATAAG
ACTAAATCTTAGAAAAGCTAGTATATTTAAAAAAAATTAATGTGAAAAGGTGTACTAAGGGCTT
AACACAAACCTATCTCCATTTTTACCTCACAGAGTGAGGCAACTTTCACTCTTGGGCTCTTTTG
TGTTCATCTCACACAGCTCTGTGTTTATGTACAATTTGCAGAATTTTGGTATTTGATTTATAAT
AAAGCTCTCATATCTTTCACTTTAGATGTTCATTTCACTTTAGATATATAGAGACATTGTGGTG
TTTGTGTAAATGAATATATGTACAAGCATATATATCTACATGCACACACAATTCATTTAAAACT
TGTAAGTGTTGTCATCATTTAACTCTTGTTATAAGTTGTCATTCTAAATAAATGCCCACTTTCA
GGATTGAA

hide sequence

RefSeq Acc Id:

XM_006257304 ⟹ XP_006257366

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	107,596,209 - 107,627,215 (+)	NCBI
mRatBN7.2	X	102,807,593 - 102,838,580 (+)	NCBI
Rnor_6.0	X	110,381,752 - 110,411,221 (+)	NCBI
Rnor_5.0	X	110,414,581 - 110,450,324 (+)	NCBI

Sequence:

show sequence

ACACACACACACCACAGCAAGTGGTGGAGGGAGCATAATATAACAACATCAGGACCAGGAAAAC
TAACCTTTCAAAGACTTAATTTCCCCCTAATAAGGTATTATTAATTCACCTCAATCACTAAGCG
GGCCATGGCAAATATTTTTAAGACATTTTGAGCAGCTGGACCTCAATTTAGTTTGCAGAAATAA
AGTGGCAGAATAGGCAAAACAAAACATTTTGTGTGTTGCAAAAGATATTCTTATCTAGGTCTTT
AATATATGTTAAAGATATTTCTGCATTTTTTTCAGGGAGGGAATCATCTGCCCTGATGCTTTGA
ATGCAAAGTAAAGGACACATGTTGCCTTTCTGCTTTCTAGCTTAAAAAAAAAAAGCCCATGTTT
TTCCTTTGCAGACTGTAACAAGTCTGAGTCTGAGTTGGCTTTCGCCCCTCCCCAGGGGCTCTTC
CCTGCAGCCCCCAGCACGAGAAGGGGCGGAGCTTATGCCTGCTGGTGGGAAGCGCGCAGCAGCG
CTCGTCCTGGGGGAGGGGTTGCACTTCTCAGGCGGCGGCGGCAGCAGCAGACTAGGAGCTAGGA
GGGAGTGGCCTTCAGCTCTGCGTCACCGTGGAGGCCGAGCCTTCTTTGAGCAGCGCCTGTGAGT
TCTGGCTTGCCAGCCTCGGGGGAGGAGCTGCATTTTAGCAGGCTGCAGCTGACAAGAAGCTTCA
AGAGGTGTCTTGAGATTGGAGTGACTCCAGAAAGGCAGCGTAACTACATACGTGCCCCACAGGG
TGAAAGACCTGTTTGGAAGTCAGCTGGCGTGAGGGTCACACAGCCAGACTACCTACCAGTGTAC
CAAACAGAGTATCTTCCAGAGTTCTCTTATTCAAACAACATGTTCAAGTATCCTGGGGACATAT
CTGTGGAAGAAAACGGTGCACATAAGCTATAAACTCTTTGTGGTTCTAAATCAAAAAGAAACGT
TACTAAGACTGGTGTTTTGATAGCACTTGTATTTGCAGCCACAAGGCTAGCCAATCTCTTTGTC
TGTAATACTAACTACTTGGCACATTAATCTAAATCATAATGGATGGTGAATATGTCCTATGTAG
TTGGAAAGACCAATTATGGCCAGCCAAAGTTTTAGATAGGTCTGAAAGTCCTTCAGACAGTAAG
AGGAAAAAGACATTGTCTGTAGAAGTTGAAATACTTTCACTGGATGAGAAAATTACCGTGGAAA
GCAAAGACACAAAAGTCCTAACCAAATCTGCTGTCGAAGCCATTATGTCCTCTCTAACAGTGCA
GTCAGAGGTCAGCTTTACACCTACGGAGGAAACTGCCTATGAAAGATCACTGAAAATGGCACTG
GAAATCGTGGAAGAAAGAACAAATCAGAGCCACGAAAGCATGGCAGAAGAGCAACATATGGCTA
CAGCATCTGAAAATGTGCCACAGCAGCCGCCTGATTCGCCTCCTCATAAAAAGTTCCGGAAACT
CGAAAGCAACCTCCAGGAAGACTCGGCTTCCATGTTGCTGTGCTCCGAGAGTGATGATTCCCTC
TCCGACGAGAAGTTGCAGGTGCACACAACCAGTGAGAACATGCCAAGTGAAGTGGAAATGAAGT
CAGAAAACTTAAGCTGCTGCCAAACGTACCCTTCCTTTTCAGATGATGATGATAAAAAAGAAGA
AAAGAAAAAGATTGACATCTCGGCGATCATGTCTGTGAATTTATCGCTCAAAGAAGAAAGCGAA
TTTATTAAAGAAGAAAAGTTTGTCCCCTCATCAGAAGATCTCGCTGTACCCAAAGAGGAGTCCC
AAGACATCCTCCCAGATGCCCCGGCTGTTTCCTCTGAATGCTTTATTGTCTCAGAGAATAACAT
GGAAGATCCTGGAGAGGGCCCATCAAATCAGAATCCAGGTTCCTATGGCAGCCAAAGTCAGTCT
ACTGTGGAATCAGATGTAGGTGCTGAGACATCCACTGCAGGGTGCTCAGGGGACTATCAGGTTT
CCCTTCCTGCCCGTGATACAGTCAACAGTGATCTACTACTCCAGAGACTGGATTTAGAAGATCT
TGAGGAAGAAGCCCGAGCTTCTGGCAAGCTTTTGTCTCTAAATCCTGCCTGTGCGGCTGCGTTA
GAAAATGATGATGAGGACGACGATGAAGACCTTCCACGTTTCATCCTCCGTTATGAGACACGTG
CATTTGAAACCGGCATGATAGTGTGGTTTAAATATCAAAAATACCCATTTTGGCCAGCAGTGAT
CAAAAGCATCAGGCGGAAAGAGAGGAAAGCGAGTGTGCTTTTGGTTGAGGCAGACATGAATCCT
CAAAAGAGAGGCGTTAGAGTATCTTTGAGAAGGCTGAAAAAATATGACTGTAAAGAGAAACAGG
CACTAGTGGAGAAAGCCAGGGAGGAGTACAAGGAGAGCATTGATTGGTGCGTGTCGCTGATTTG
TGACTACCGAGTTAGACTAGGCTGTGGTTCTTTTACTGGTTCATTCTTTGAGTATTACGCTGCT
GACATCAGTTACCCGGTCAGGAAAATCATCAAACAAGATACGTTCAGAAATATATTTCCAAAGC
TATACAATGAAGACGCGGGGGAGCAATTGCCTGTGGCATCTCACGCCAAGAGAGTATCTTTCCG
GAAAATTCTCCCTGATCGCATGAAGCCTGCTCGGGACCGAGCTAACAAGAACCTTGTAGATTTC
ATTGTCAATGCAAAAGGAACTGAGGACCACCTCCTGGGAATTTTAAAGGGCACAAAAAAATCCA
AGTGGCTGAAATCATTTCTGAATGCAAAGAGTTTCACACCCTGTATTGAAACCTACTTTGAAGA
CGAAGATCAACTGGATGAAGTGGTGAAATATCTACAAGAAATTTATAAGCAAATTGACCAGAAG
ATGCTGACTCTGATAAAAGATGACAAAATTAAGTTTGTCTTGGAAGTTCTTCTACCCGAAGCAA
TTATTTGCTCAATTTCTGCAGTTGATGGCTTAGATTATGAAGCAGCGGAGGCAAAGTATCTAAA
GGGACCATCCCTTGGCTATAGGGAGAGAGAATTATATGATTCCAAAATCCTATTTGAAAAGAGG
CGGAGGTCATTACCAAATGAAGGTCGTTAATTATGCCAAGAGTTGAAACCAAAATGGAAACTAG
ATGAAACTTTGGAAAAGTAATCTTCTAAAAGTTCCAATGCATAAATATTTGCTGAAAATGAAGG
GAGGGTCCTTGAATTCTAAGTTCTTTTATTTTTTGAAGATCCATGTGATCCGCAAATACCAATA
CATCCACCTTTATTTTCTTGTGCTTTTTCAGATTCAGCTTTATCAGTATATTTTTAGCAGTTTT
TCTAATATATTTTGGAATGCATAATTCTTAGGCAACTTTAGGGGGAACTGTTACTTTGTTTTAT
GATATTTTGGTGTCTTTGCTGTATAGGTAAATACATTATGTACATTCAGTTCAATAAAACTGCA
CTGGTGTTAGATTTTAAGCAAGAGAATTAGAAGAGATGTCTAAAACAAATACCAGTTATATATT
TTTTTGGTCAATTTTTTTATAAAGTACTGACTTTTCTCTTAAGATAGCCAATTTATTTTTCCTG
CCATGCCTATTTATTTTTGGGAAAAAATATCTCTAAATCATAGAACCAAAGATAGATTAAAATT
TGCCACATATATACAACTAACCACAATTGCTTCTGCAAGAAAACAATCTAAAATTAAAAAGTAA
ATGGGTTATCCACATGTAATCTATCTGAGTGTACGTATGTTTATAACACCTCAGCATGCAGAAA
ATGATTGTTCATTGTACACTTCTCTGAAATTCTAGTTTGAGGAGTGTCTGTCGTTCAGTGCTGA
ATAATTTCTAAAACAGATAAACTTCTGGCTATCTTCATTATCATGAGTAGATCATAATATAGCA
ATTTGAGTACATGTAGAAGACAGTTAAAATGAGCGTGTCAACAGTCTAGCCACCCTACAGTCCA
GGGTTGCTGCTTCATATCCTTCTAGTTTGATATAAAGTAAGAAAAGCAAGCACTGTGTTCAGTC
CTTTCTCCGAATATAAAGTCATTTGTCTCCAACCAAGCAAGCTTTAGCATCTGGCTTATTTCTA
GAACGGTTCCAATTGGTTCCAGTAACATAATTGCCAACTGGTTAATCATTCCAACATACTAGAT
GGACCAGTATCTGGGAAATTGGAAAAATGTTACAGCAAAAGTTCTTTACTTGCTACATGTGGCC
GTTATTCTGTATATGGTTATGTATACAAAATTAGTCGTTCTTGTAACTTGAAACAAGATTTTTT
TTATAAGACTAAATCTTAGAAAAGCTAGTATATTTAAAAAAAATTAATGTGAAAAGGTGTACTA
AGGGCTTAACACAAACCTATCTCCATTTTTACCTCACAGAGTGAGGCAACTTTCACTCTTGGGC
TCTTTTGTGTTCATCTCACACAGCTCTGTGTTTATGTACAATTTGCAGAATTTTGGTATTTGAT
TTATAATAAAGCTCTCATATCTTTCACTTTAGATGTTCATTTCACTTTAGATATATAGAGACAT
TGTGGTGTTTGTGTAAATGAATATATGTACAAGCATATATATCTACATGCACACACAATTCATT
TAAAACTTGTAAGTGTTGTCATCATTTAACTCTTGTTATAAGTTGTCATTCTAAATAAATGCCC
ACTTTCAGGATTGAA

hide sequence

RefSeq Acc Id:

XM_006257305 ⟹ XP_006257367

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	107,593,062 - 107,627,215 (+)	NCBI
mRatBN7.2	X	102,804,417 - 102,838,580 (+)	NCBI
Rnor_6.0	X	110,375,434 - 110,411,221 (+)	NCBI
Rnor_5.0	X	110,414,581 - 110,450,324 (+)	NCBI

Sequence:

show sequence

GCGGGCGGCCACTCGCTCGGGGCTCGCATGGGATACACATTTTTTCGTGAGGTTCAGACTGCTT
AAGGGAGAGCCGCGGTGGCCAAGTGGCGGCAGCGGCTGCGGCGGCGGTGGCTGCGGCGGCGGCG
GGCTCCAGAGGCTGCGTCTTCAGGCCTGTCCTGGAAGTAGGTGTTTTTGGAGATTTGTAGAAGA
TTTCGGTGTGAAAGTCCTGCCTTTGGTACCACTTGTGACCAGAAAAGCAGTGCAGCCGTACAAG
GACCCAGAAGGGTGAGGGCTCTGCTGGGCAAACAGCTAAAGTGTGACTCAAAACAGCTGGACCA
TAGTGTCAGACTACCAGAGAGCCTGTGACAGAGGGGAGTGGCCTTCAGCTCTGCGTCACCGTGG
AGGCCGAGCCTTCTTTGAGCAGCGCCTGTGAGTTCTGGCTTGCCAGCCTCGGGGGAGGAGCTGC
ATTTTAGCAGGCTGCAGCTGACAAGAAGCTTCAAGCAGAGGTGTCTTGAGATTGGAGTGACTCC
AGAAAGGCAGCGTAACTACATACGTGCCCCACAGGGTGAAAGACCTGTTTGGAAGTCAGCTGGC
GTGAGGGTCACACAGCCAGACTACCTACCAGTGTACCAAACAGAGTATCTTCCAGAGTTCTCTT
ATTCAAACAACATGTTCAAGTATCCTGGGGACATATCTGTGGAAGAAAACGGTGCACATAAGCT
ATAAACTCTTTGTGGTTCTAAATCAAAAAGAAACGTTACTAAGACTGGTGTTTTGATAGCACTT
GTATTTGCAGCCACAAGGCTAGCCAATCTCTTTGTCTGTAATACTAACTACTTGGCACATTAAT
CTAAATCATAATGGATGGTGAATATGTCCTATGTAGTTGGAAAGACCAATTATGGCCAGCCAAA
GTTTTAGATAGGTCTGAAAGTCCTTCAGACAGTAAGAGGAAAAAGACATTGTCTGTAGAAGTTG
AAATACTTTCACTGGATGAGAAAATTACCGTGGAAAGCAAAGACACAAAAGTCCTAACCAAATC
TGCTGTCGAAGCCATTATGTCCTCTCTAACAGTGCAGTCAGAGGTCAGCTTTACACCTACGGAG
GAAACTGCCTATGAAAGATCACTGAAAATGGCACTGGAAATCGTGGAAGAAAGAACAAATCAGA
GCCACGAAAGCATGGCAGAAGAGCAACATATGGCTACAGCATCTGAAAATGTGCCACAGCAGCC
GCCTGATTCGCCTCCTCATAAAAAGTTCCGGAAACTCGAAAGCAACCTCCAGGAAGACTCGGCT
TCCATGTTGCTGTGCTCCGAGAGTGATGATTCCCTCTCCGACGAGAAGTTGCAGGTGCACACAA
CCAGTGAGAACATGCCAAGTGAAGTGGAAATGAAGTCAGAAAACTTAAGCTGCTGCCAAACGTA
CCCTTCCTTTTCAGATGATGATGATAAAAAAGAAGAAAAGAAAAAGATTGACATCTCGGCGATC
ATGTCTGTGAATTTATCGCTCAAAGAAGAAAGCGAATTTATTAAAGAAGAAAAGTTTGTCCCCT
CATCAGAAGATCTCGCTGTACCCAAAGAGGAGTCCCAAGACATCCTCCCAGATGCCCCGGCTGT
TTCCTCTGAATGCTTTATTGTCTCAGAGAATAACATGGAAGATCCTGGAGAGGGCCCATCAAAT
CAGAATCCAGGTTCCTATGGCAGCCAAAGTCAGTCTACTGTGGAATCAGATGTAGGTGCTGAGA
CATCCACTGCAGGGTGCTCAGGGGACTATCAGGTTTCCCTTCCTGCCCGTGATACAGTCAACAG
TGATCTACTACTCCAGAGACTGGATTTAGAAGATCTTGAGGAAGAAGCCCGAGCTTCTGGCAAG
CTTTTGTCTCTAAATCCTGCCTGTGCGGCTGCGTTAGAAAATGATGATGAGGACGACGATGAAG
ACCTTCCACGTTTCATCCTCCGTTATGAGACACGTGCATTTGAAACCGGCATGATAGTGTGGTT
TAAATATCAAAAATACCCATTTTGGCCAGCAGTGATCAAAAGCATCAGGCGGAAAGAGAGGAAA
GCGAGTGTGCTTTTGGTTGAGGCAGACATGAATCCTCAAAAGAGAGGCGTTAGAGTATCTTTGA
GAAGGCTGAAAAAATATGACTGTAAAGAGAAACAGGCACTAGTGGAGAAAGCCAGGGAGGAGTA
CAAGGAGAGCATTGATTGGTGCGTGTCGCTGATTTGTGACTACCGAGTTAGACTAGGCTGTGGT
TCTTTTACTGGTTCATTCTTTGAGTATTACGCTGCTGACATCAGTTACCCGGTCAGGAAAATCA
TCAAACAAGATACGTTCAGAAATATATTTCCAAAGCTATACAATGAAGACGCGGGGGAGCAATT
GCCTGTGGCATCTCACGCCAAGAGAGTATCTTTCCGGAAAATTCTCCCTGATCGCATGAAGCCT
GCTCGGGACCGAGCTAACAAGAACCTTGTAGATTTCATTGTCAATGCAAAAGGAACTGAGGACC
ACCTCCTGGGAATTTTAAAGGGCACAAAAAAATCCAAGTGGCTGAAATCATTTCTGAATGCAAA
GAGTTTCACACCCTGTATTGAAACCTACTTTGAAGACGAAGATCAACTGGATGAAGTGGTGAAA
TATCTACAAGAAATTTATAAGCAAATTGACCAGAAGATGCTGACTCTGATAAAAGATGACAAAA
TTAAGTTTGTCTTGGAAGTTCTTCTACCCGAAGCAATTATTTGCTCAATTTCTGCAGTTGATGG
CTTAGATTATGAAGCAGCGGAGGCAAAGTATCTAAAGGGACCATCCCTTGGCTATAGGGAGAGA
GAATTATATGATTCCAAAATCCTATTTGAAAAGAGGCGGAGGTCATTACCAAATGAAGGTCGTT
AATTATGCCAAGAGTTGAAACCAAAATGGAAACTAGATGAAACTTTGGAAAAGTAATCTTCTAA
AAGTTCCAATGCATAAATATTTGCTGAAAATGAAGGGAGGGTCCTTGAATTCTAAGTTCTTTTA
TTTTTTGAAGATCCATGTGATCCGCAAATACCAATACATCCACCTTTATTTTCTTGTGCTTTTT
CAGATTCAGCTTTATCAGTATATTTTTAGCAGTTTTTCTAATATATTTTGGAATGCATAATTCT
TAGGCAACTTTAGGGGGAACTGTTACTTTGTTTTATGATATTTTGGTGTCTTTGCTGTATAGGT
AAATACATTATGTACATTCAGTTCAATAAAACTGCACTGGTGTTAGATTTTAAGCAAGAGAATT
AGAAGAGATGTCTAAAACAAATACCAGTTATATATTTTTTTGGTCAATTTTTTTATAAAGTACT
GACTTTTCTCTTAAGATAGCCAATTTATTTTTCCTGCCATGCCTATTTATTTTTGGGAAAAAAT
ATCTCTAAATCATAGAACCAAAGATAGATTAAAATTTGCCACATATATACAACTAACCACAATT
GCTTCTGCAAGAAAACAATCTAAAATTAAAAAGTAAATGGGTTATCCACATGTAATCTATCTGA
GTGTACGTATGTTTATAACACCTCAGCATGCAGAAAATGATTGTTCATTGTACACTTCTCTGAA
ATTCTAGTTTGAGGAGTGTCTGTCGTTCAGTGCTGAATAATTTCTAAAACAGATAAACTTCTGG
CTATCTTCATTATCATGAGTAGATCATAATATAGCAATTTGAGTACATGTAGAAGACAGTTAAA
ATGAGCGTGTCAACAGTCTAGCCACCCTACAGTCCAGGGTTGCTGCTTCATATCCTTCTAGTTT
GATATAAAGTAAGAAAAGCAAGCACTGTGTTCAGTCCTTTCTCCGAATATAAAGTCATTTGTCT
CCAACCAAGCAAGCTTTAGCATCTGGCTTATTTCTAGAACGGTTCCAATTGGTTCCAGTAACAT
AATTGCCAACTGGTTAATCATTCCAACATACTAGATGGACCAGTATCTGGGAAATTGGAAAAAT
GTTACAGCAAAAGTTCTTTACTTGCTACATGTGGCCGTTATTCTGTATATGGTTATGTATACAA
AATTAGTCGTTCTTGTAACTTGAAACAAGATTTTTTTTATAAGACTAAATCTTAGAAAAGCTAG
TATATTTAAAAAAAATTAATGTGAAAAGGTGTACTAAGGGCTTAACACAAACCTATCTCCATTT
TTACCTCACAGAGTGAGGCAACTTTCACTCTTGGGCTCTTTTGTGTTCATCTCACACAGCTCTG
TGTTTATGTACAATTTGCAGAATTTTGGTATTTGATTTATAATAAAGCTCTCATATCTTTCACT
TTAGATGTTCATTTCACTTTAGATATATAGAGACATTGTGGTGTTTGTGTAAATGAATATATGT
ACAAGCATATATATCTACATGCACACACAATTCATTTAAAACTTGTAAGTGTTGTCATCATTTA
ACTCTTGTTATAAGTTGTCATTCTAAATAAATGCCCACTTTCAGGATTGAA

hide sequence

RefSeq Acc Id:

XM_063280255 ⟹ XP_063136325

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	107,596,209 - 107,627,215 (+)	NCBI

RefSeq Acc Id:

XM_063280256 ⟹ XP_063136326

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	107,596,209 - 107,627,215 (+)	NCBI

RefSeq Acc Id:

XM_063280257 ⟹ XP_063136327

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	107,596,209 - 107,627,215 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001102791	(Get FASTA)	NCBI Sequence Viewer
	NP_001421274	(Get FASTA)	NCBI Sequence Viewer
	NP_001421275	(Get FASTA)	NCBI Sequence Viewer
	NP_001421276	(Get FASTA)	NCBI Sequence Viewer
	NP_001421277	(Get FASTA)	NCBI Sequence Viewer
	XP_006257363	(Get FASTA)	NCBI Sequence Viewer
	XP_006257365	(Get FASTA)	NCBI Sequence Viewer
	XP_006257366	(Get FASTA)	NCBI Sequence Viewer
	XP_006257367	(Get FASTA)	NCBI Sequence Viewer
	XP_063136325	(Get FASTA)	NCBI Sequence Viewer
	XP_063136326	(Get FASTA)	NCBI Sequence Viewer
	XP_063136327	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI68654	(Get FASTA)	NCBI Sequence Viewer
	EDL88016	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000043912.5
	ENSRNOP00000078429.1
	ENSRNOP00000079665.1
	ENSRNOP00000100798.1
	ENSRNOP00000105135
	ENSRNOP00000105135.1
	ENSRNOP00000107757
	ENSRNOP00000107757.1
	ENSRNOP00000109839.1
	ENSRNOP00000110466.1
	ENSRNOP00000111756
	ENSRNOP00000111756.1
	ENSRNOP00000112100
	ENSRNOP00000112100.1

RefSeq Acc Id:

NP_001102791 ⟸ NM_001109321

- UniProtKB:

B5DEG0 (UniProtKB/TrEMBL), A6KNX2 (UniProtKB/TrEMBL), F6QZQ9 (UniProtKB/TrEMBL), A0A8I5ZKW6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDGEYVLCSWKDQLWPAKVLDRSESPSDSKRKKTLSVEVEILSLDEKITVESKDTKVLTKSAVE
AIMSSLTVQSEVSFTPTEETAYERSLKMALEIVEERTNQSHESMAEEQHMATASENVPQQPPDS
PPHKKFRKLESNLQEDSASMLLCSESDDSLSDEKLQVHTTSENMPSEVEMKSENLSCCQTYPSF
SDDDDKKEEKKKIDISAIMSVNLSLKEESEFIKEEKFVPSSEDLAVPKEESQDILPDAPAVSSE
CFIVSENNMEDPGEGPSNQNPGSYGSQSQSTVESDVGAETSTAGCSGDYQVSLPARDTVNSDLL
LQRLDLEDLEEEARASGKLLSLNPACAAALENDDEDDDEDLPRFILRYETRAFETGMIVWFKYQ
KYPFWPAVIKSIRRKERKASVLLVEADMNPQKRGVRVSLRRLKKYDCKEKQALVEKAREEYKES
IDWCVSLICDYRVRLGCGSFTGSFFEYYAADISYPVRKIIKQDTFRNIFPKLYNEDAGEQLPVA
SHAKRVSFRKILPDRMKPARDRANKNLVDFIVNAKGTEDHLLGILKGTKKSKWLKSFLNAKSFT
PCIETYFEDEDQLDEVVKYLQEIYKQIDQKMLTLIKDDKIKFVLEVLLPEAIICSISAVDGLDY
EAAEAKYLKGPSLGYRERELYDSKILFEKRRRSLPNEGR

hide sequence

RefSeq Acc Id:

XP_006257367 ⟸ XM_006257305

- Peptide Label:

isoform X1

- Sequence:

show sequence

MDGEYVLCSWKDQLWPAKVLDRSESPSDSKRKKTLSVEVEILSLDEKITVESKDTKVLTKSAVE
AIMSSLTVQSEVSFTPTEETAYERSLKMALEIVEERTNQSHESMAEEQHMATASENVPQQPPDS
PPHKKFRKLESNLQEDSASMLLCSESDDSLSDEKLQVHTTSENMPSEVEMKSENLSCCQTYPSF
SDDDDKKEEKKKIDISAIMSVNLSLKEESEFIKEEKFVPSSEDLAVPKEESQDILPDAPAVSSE
CFIVSENNMEDPGEGPSNQNPGSYGSQSQSTVESDVGAETSTAGCSGDYQVSLPARDTVNSDLL
LQRLDLEDLEEEARASGKLLSLNPACAAALENDDEDDDEDLPRFILRYETRAFETGMIVWFKYQ
KYPFWPAVIKSIRRKERKASVLLVEADMNPQKRGVRVSLRRLKKYDCKEKQALVEKAREEYKES
IDWCVSLICDYRVRLGCGSFTGSFFEYYAADISYPVRKIIKQDTFRNIFPKLYNEDAGEQLPVA
SHAKRVSFRKILPDRMKPARDRANKNLVDFIVNAKGTEDHLLGILKGTKKSKWLKSFLNAKSFT
PCIETYFEDEDQLDEVVKYLQEIYKQIDQKMLTLIKDDKIKFVLEVLLPEAIICSISAVDGLDY
EAAEAKYLKGPSLGYRERELYDSKILFEKRRRSLPNEGR

hide sequence

RefSeq Acc Id:

XP_006257363 ⟸ XM_006257301

- Peptide Label:

isoform X1

- Sequence:

show sequence

MDGEYVLCSWKDQLWPAKVLDRSESPSDSKRKKTLSVEVEILSLDEKITVESKDTKVLTKSAVE
AIMSSLTVQSEVSFTPTEETAYERSLKMALEIVEERTNQSHESMAEEQHMATASENVPQQPPDS
PPHKKFRKLESNLQEDSASMLLCSESDDSLSDEKLQVHTTSENMPSEVEMKSENLSCCQTYPSF
SDDDDKKEEKKKIDISAIMSVNLSLKEESEFIKEEKFVPSSEDLAVPKEESQDILPDAPAVSSE
CFIVSENNMEDPGEGPSNQNPGSYGSQSQSTVESDVGAETSTAGCSGDYQVSLPARDTVNSDLL
LQRLDLEDLEEEARASGKLLSLNPACAAALENDDEDDDEDLPRFILRYETRAFETGMIVWFKYQ
KYPFWPAVIKSIRRKERKASVLLVEADMNPQKRGVRVSLRRLKKYDCKEKQALVEKAREEYKES
IDWCVSLICDYRVRLGCGSFTGSFFEYYAADISYPVRKIIKQDTFRNIFPKLYNEDAGEQLPVA
SHAKRVSFRKILPDRMKPARDRANKNLVDFIVNAKGTEDHLLGILKGTKKSKWLKSFLNAKSFT
PCIETYFEDEDQLDEVVKYLQEIYKQIDQKMLTLIKDDKIKFVLEVLLPEAIICSISAVDGLDY
EAAEAKYLKGPSLGYRERELYDSKILFEKRRRSLPNEGR

hide sequence

RefSeq Acc Id:

XP_006257366 ⟸ XM_006257304

- Peptide Label:

isoform X1

- Sequence:

show sequence

MDGEYVLCSWKDQLWPAKVLDRSESPSDSKRKKTLSVEVEILSLDEKITVESKDTKVLTKSAVE
AIMSSLTVQSEVSFTPTEETAYERSLKMALEIVEERTNQSHESMAEEQHMATASENVPQQPPDS
PPHKKFRKLESNLQEDSASMLLCSESDDSLSDEKLQVHTTSENMPSEVEMKSENLSCCQTYPSF
SDDDDKKEEKKKIDISAIMSVNLSLKEESEFIKEEKFVPSSEDLAVPKEESQDILPDAPAVSSE
CFIVSENNMEDPGEGPSNQNPGSYGSQSQSTVESDVGAETSTAGCSGDYQVSLPARDTVNSDLL
LQRLDLEDLEEEARASGKLLSLNPACAAALENDDEDDDEDLPRFILRYETRAFETGMIVWFKYQ
KYPFWPAVIKSIRRKERKASVLLVEADMNPQKRGVRVSLRRLKKYDCKEKQALVEKAREEYKES
IDWCVSLICDYRVRLGCGSFTGSFFEYYAADISYPVRKIIKQDTFRNIFPKLYNEDAGEQLPVA
SHAKRVSFRKILPDRMKPARDRANKNLVDFIVNAKGTEDHLLGILKGTKKSKWLKSFLNAKSFT
PCIETYFEDEDQLDEVVKYLQEIYKQIDQKMLTLIKDDKIKFVLEVLLPEAIICSISAVDGLDY
EAAEAKYLKGPSLGYRERELYDSKILFEKRRRSLPNEGR

hide sequence

RefSeq Acc Id:

XP_006257365 ⟸ XM_006257303

- Peptide Label:

isoform X1

- Sequence:

show sequence

MDGEYVLCSWKDQLWPAKVLDRSESPSDSKRKKTLSVEVEILSLDEKITVESKDTKVLTKSAVE
AIMSSLTVQSEVSFTPTEETAYERSLKMALEIVEERTNQSHESMAEEQHMATASENVPQQPPDS
PPHKKFRKLESNLQEDSASMLLCSESDDSLSDEKLQVHTTSENMPSEVEMKSENLSCCQTYPSF
SDDDDKKEEKKKIDISAIMSVNLSLKEESEFIKEEKFVPSSEDLAVPKEESQDILPDAPAVSSE
CFIVSENNMEDPGEGPSNQNPGSYGSQSQSTVESDVGAETSTAGCSGDYQVSLPARDTVNSDLL
LQRLDLEDLEEEARASGKLLSLNPACAAALENDDEDDDEDLPRFILRYETRAFETGMIVWFKYQ
KYPFWPAVIKSIRRKERKASVLLVEADMNPQKRGVRVSLRRLKKYDCKEKQALVEKAREEYKES
IDWCVSLICDYRVRLGCGSFTGSFFEYYAADISYPVRKIIKQDTFRNIFPKLYNEDAGEQLPVA
SHAKRVSFRKILPDRMKPARDRANKNLVDFIVNAKGTEDHLLGILKGTKKSKWLKSFLNAKSFT
PCIETYFEDEDQLDEVVKYLQEIYKQIDQKMLTLIKDDKIKFVLEVLLPEAIICSISAVDGLDY
EAAEAKYLKGPSLGYRERELYDSKILFEKRRRSLPNEGR

hide sequence

Ensembl Acc Id:

ENSRNOP00000043912 ⟸ ENSRNOT00000041044

Ensembl Acc Id:

ENSRNOP00000079665 ⟸ ENSRNOT00000100602

Ensembl Acc Id:

ENSRNOP00000078429 ⟸ ENSRNOT00000118449

RefSeq Acc Id:	XP_063136327 ⟸ XM_063280257
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZKW6 (UniProtKB/TrEMBL), A6KNX2 (UniProtKB/TrEMBL), B5DEG0 (UniProtKB/TrEMBL), F6QZQ9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063136326 ⟸ XM_063280256
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZKW6 (UniProtKB/TrEMBL), A6KNX2 (UniProtKB/TrEMBL), B5DEG0 (UniProtKB/TrEMBL), F6QZQ9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063136325 ⟸ XM_063280255
- Peptide Label:	isoform X1

Ensembl Acc Id:

ENSRNOP00000111756 ⟸ ENSRNOT00000157017

Ensembl Acc Id:

ENSRNOP00000110466 ⟸ ENSRNOT00000148770

Ensembl Acc Id:

ENSRNOP00000107757 ⟸ ENSRNOT00000123268

Ensembl Acc Id:

ENSRNOP00000109839 ⟸ ENSRNOT00000122225

Ensembl Acc Id:

ENSRNOP00000112100 ⟸ ENSRNOT00000164023

Ensembl Acc Id:

ENSRNOP00000105135 ⟸ ENSRNOT00000140999

Ensembl Acc Id:

ENSRNOP00000100798 ⟸ ENSRNOT00000151909

Protein Domains

MUM1-like PWWP PWWP

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B5DEG0-F1-model_v2	AlphaFold	B5DEG0	1-679	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1565148	AgrOrtholog
BioCyc Gene	G2FUF-1567	BioCyc
Ensembl Genes	ENSRNOG00000030475	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000041044.6	UniProtKB/TrEMBL
	ENSRNOT00000100602.2	UniProtKB/TrEMBL
	ENSRNOT00000118449.2	UniProtKB/TrEMBL
	ENSRNOT00000122225.1	UniProtKB/TrEMBL
	ENSRNOT00000123268	ENTREZGENE
	ENSRNOT00000123268.1	UniProtKB/TrEMBL
	ENSRNOT00000140999	ENTREZGENE
	ENSRNOT00000140999.1	UniProtKB/TrEMBL
	ENSRNOT00000148770.1	UniProtKB/TrEMBL
	ENSRNOT00000151909.1	UniProtKB/TrEMBL
	ENSRNOT00000157017	ENTREZGENE
	ENSRNOT00000157017.1	UniProtKB/TrEMBL
	ENSRNOT00000164023	ENTREZGENE
	ENSRNOT00000164023.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.30.140	UniProtKB/TrEMBL
	6.10.300.20	UniProtKB/TrEMBL
InterPro	MUM1-like	UniProtKB/TrEMBL
	MUM1-like_PWWP	UniProtKB/TrEMBL
	PWP3A_3B_4_C	UniProtKB/TrEMBL
	PWP3A_3B_4_N	UniProtKB/TrEMBL
KEGG Report	rno:501630	UniProtKB/TrEMBL
NCBI Gene	501630	ENTREZGENE
PANTHER	PTHR31333	UniProtKB/TrEMBL
	PWWP DOMAIN-CONTAINING DNA REPAIR FACTOR 3B	UniProtKB/TrEMBL
Pfam	MUM1-like_PWWP	UniProtKB/TrEMBL
	PWP3A-B_C	UniProtKB/TrEMBL
	PWP3A-B_N	UniProtKB/TrEMBL
PhenoGen	Pwwp3b	PhenoGen
RatGTEx	ENSRNOG00000030475	RatGTEx
Superfamily-SCOP	Tudor/PWWP/MBT	UniProtKB/TrEMBL
UniProt	A0A8I5ZKW6	ENTREZGENE, UniProtKB/TrEMBL
	A6KNX2	ENTREZGENE
	B5DEG0	ENTREZGENE, UniProtKB/TrEMBL
	F6QZQ9	ENTREZGENE
UniProt Secondary	A6KNX2	UniProtKB/TrEMBL
	F6QZQ9	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-11-02	Pwwp3b	PWWP domain containing 3B	Mum1l1	MUM1 like 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2016-06-10	Mum1l1	MUM1 like 1	Mum1l1	melanoma associated antigen (mutated) 1-like 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-06	Mum1l1	melanoma associated antigen (mutated) 1-like 1	RGD1565148_predicted	similar to melanoma associated antigen (mutated) 1-like 1 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1565148_predicted	similar to melanoma associated antigen (mutated) 1-like 1 (predicted)	LOC501630	similar to melanoma associated antigen (mutated) 1-like 1	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC501630	similar to melanoma associated antigen (mutated) 1-like 1			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar