Neurl1b (neuralized E3 ubiquitin protein ligase 1B) - Rat Genome Database

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Gene: Neurl1b (neuralized E3 ubiquitin protein ligase 1B) Rattus norvegicus
Analyze
Symbol: Neurl1b
Name: neuralized E3 ubiquitin protein ligase 1B
RGD ID: 1564984
Description: Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in ubiquitin-dependent endocytosis. Predicted to be located in actin cytoskeleton and cytosol. Predicted to be active in early endosome. Orthologous to human NEURL1B (neuralized E3 ubiquitin protein ligase 1B); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; acetamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: E3 ubiquitin-protein ligase NEURL1B; E3 ubiquitin-protein ligase NEURL3; LOC303019; neuralized 2; neuralized homolog 1B; neuralized homolog 1B (Drosophila); Neurl2; RGD1564984; similar to neuralized homolog
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81017,258,317 - 17,289,362 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1017,258,328 - 17,289,362 (-)EnsemblGRCr8
mRatBN7.21016,754,002 - 16,785,049 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1016,757,208 - 16,785,119 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1021,507,817 - 21,534,652 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01020,996,410 - 21,023,245 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01016,486,310 - 16,513,110 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01017,048,251 - 17,075,139 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1017,048,251 - 17,075,139 (-)Ensemblrn6Rnor6.0
Rnor_5.01016,945,337 - 16,972,071 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41017,020,612 - 17,048,248 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1016,410,661 - 16,437,321 (-)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
acetamide  (EXP)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
aldehydo-D-glucose  (ISO)
alpha-Zearalanol  (EXP)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
carbon nanotube  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) chloride  (ISO)
coumestrol  (ISO)
D-glucose  (ISO)
dexamethasone  (ISO)
diallyl trisulfide  (ISO)
dinophysistoxin 1  (ISO)
dorsomorphin  (ISO)
Enterolactone  (ISO)
entinostat  (ISO)
enzalutamide  (ISO)
ethanol  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
gentamycin  (EXP)
glucose  (ISO)
hydroquinone  (ISO)
indometacin  (ISO)
Licochalcone B  (ISO)
lipopolysaccharide  (ISO)
methapyrilene  (ISO)
N-Nitrosopyrrolidine  (ISO)
okadaic acid  (ISO)
organophosphorus compound  (EXP)
paracetamol  (EXP)
paraquat  (EXP)
perfluorooctanoic acid  (EXP)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
propanal  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
tetrachloromethane  (ISO)
titanium dioxide  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
trovafloxacin  (ISO)
valproic acid  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
cytosol  (IEA,ISO)
early endosome  (IBA,IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:15632090   PMID:17003037   PMID:19723503  


Genomics

Comparative Map Data
Neurl1b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81017,258,317 - 17,289,362 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1017,258,328 - 17,289,362 (-)EnsemblGRCr8
mRatBN7.21016,754,002 - 16,785,049 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1016,757,208 - 16,785,119 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1021,507,817 - 21,534,652 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01020,996,410 - 21,023,245 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01016,486,310 - 16,513,110 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01017,048,251 - 17,075,139 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1017,048,251 - 17,075,139 (-)Ensemblrn6Rnor6.0
Rnor_5.01016,945,337 - 16,972,071 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41017,020,612 - 17,048,248 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1016,410,661 - 16,437,321 (-)NCBICelera
Cytogenetic Map10q12NCBI
NEURL1B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385172,641,263 - 172,691,540 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5172,641,248 - 172,691,540 (+)Ensemblhg38GRCh38
GRCh375172,068,266 - 172,118,543 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365172,026,659 - 172,051,148 (+)NCBIBuild 36Build 36hg18NCBI36
Celera5168,100,993 - 168,151,433 (+)NCBICelera
Cytogenetic Map5q35.1NCBI
HuRef5167,163,317 - 167,213,670 (+)NCBIHuRef
CHM1_15171,500,802 - 171,551,136 (+)NCBICHM1_1
T2T-CHM13v2.05173,181,429 - 173,231,748 (+)NCBIT2T-CHM13v2.0
Neurl1b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391726,633,833 - 26,665,295 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1726,633,803 - 26,665,323 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381726,414,859 - 26,446,321 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1726,414,829 - 26,446,349 (+)Ensemblmm10GRCm38
MGSCv371726,551,910 - 26,583,294 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361726,149,664 - 26,169,395 (+)NCBIMGSCv36mm8
MGSCv361725,606,583 - 25,626,314 (+)NCBIMGSCv36mm8
Celera1726,947,469 - 26,978,761 (+)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1713.18NCBI
Neurl1b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540825,369,490 - 25,403,893 (+)Ensembl
ChiLan1.0NW_00495540825,369,440 - 25,404,308 (+)NCBIChiLan1.0ChiLan1.0
NEURL1B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24167,780,067 - 167,830,808 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15165,919,624 - 165,970,350 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05167,994,646 - 168,045,364 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15174,932,924 - 174,956,840 (+)NCBIPanPan1.1PanPan1.1panPan2
NEURL1B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1439,657,036 - 39,677,249 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl439,660,576 - 39,696,336 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha439,600,677 - 39,640,525 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0440,027,529 - 40,067,458 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl440,029,453 - 40,067,344 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1439,843,120 - 39,882,737 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0440,032,759 - 40,072,351 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0440,542,825 - 40,582,703 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Neurl1b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721394,019,705 - 94,060,898 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366092,745,099 - 2,783,571 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366092,742,466 - 2,767,010 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NEURL1B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1651,536,573 - 51,581,126 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11651,536,564 - 51,581,072 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21655,910,012 - 55,954,132 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NEURL1B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12374,805,376 - 74,855,476 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2374,805,572 - 74,850,789 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660343,758,856 - 3,808,954 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Neurl1b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473317,343,107 - 17,381,004 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473317,342,993 - 17,381,165 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Neurl1b
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v195,021,581 - 5,049,522 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Neurl1b
166 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:106
Count of miRNA genes:94
Interacting mature miRNAs:97
Transcripts:ENSRNOT00000039398
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313095Bss62Bone structure and strength QTL 621.50.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)10589381150893811Rat
631660Hcar1Hepatocarcinoma resistance QTL 13.40.0001liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)10666111835509383Rat
631564Apr3Acute phase response QTL 33.9blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)101577675460776754Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10666092373950353Rat
2313066Bss63Bone structure and strength QTL 631.40.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)10589381150893811Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10125055464349221Rat
2313064Bmd71Bone mineral density QTL 710.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)10589381150893811Rat
2301967Cm73Cardiac mass QTL 734.55heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)101499153586964295Rat
631268Cia21Collagen induced arthritis QTL 213.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1014991535107713808Rat
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)101465354159653541Rat
1354587Kidm21Kidney mass QTL 213.3kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)101553301273695498Rat
1578761Stresp21Stress response QTL 213.3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)10687714251877142Rat
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135730538Rat
7387235Uae41Urinary albumin excretion QTL 415.260.1874urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)10130004247Rat
2313104Bss61Bone structure and strength QTL 610.90.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)10589381150893811Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10686461896620484Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1092219745922197Rat
2316949Gluco60Glucose level QTL 603.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1014991535107556066Rat
737820Alc9Alcohol consumption QTL 92.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)101576223019737486Rat
2317754Glom25Glomerulus QTL 253.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)10210370847103708Rat
2313081Bss64Bone structure and strength QTL 641.30.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)10589381150893811Rat
2298495Eae23Experimental allergic encephalomyelitis QTL 2316.93nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis duration (CMO:0001424)101617552561175525Rat
631828Alc5Alcohol consumption QTL 52.4consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)10117749933Rat
634327Hc4Hypercalciuria QTL 42.4urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)10138832698Rat

Markers in Region
UniSTS:498732  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21016,767,909 - 16,768,259 (+)MAPPERmRatBN7.2
Rnor_6.01017,058,087 - 17,058,436NCBIRnor6.0
Rnor_5.01016,955,033 - 16,955,382UniSTSRnor5.0
RGSC_v3.41017,030,214 - 17,030,563UniSTSRGSC3.4
Celera1016,420,313 - 16,420,662UniSTS
Cytogenetic Map10q12UniSTS
UniSTS:498733  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21016,758,096 - 16,758,735 (+)MAPPERmRatBN7.2
Rnor_6.01017,048,251 - 17,048,889NCBIRnor6.0
Rnor_5.01016,945,337 - 16,945,975UniSTSRnor5.0
RGSC_v3.41017,020,612 - 17,021,250UniSTSRGSC3.4
Celera1016,410,661 - 16,411,299UniSTS
Cytogenetic Map10q12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 162 91 90 59 63 59 6 327 163 11 141 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000039398   ⟹   ENSRNOP00000032620
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1016,757,208 - 16,769,283 (-)Ensembl
Rnor_6.0 Ensembl1017,048,251 - 17,075,139 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000107123   ⟹   ENSRNOP00000095650
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1016,757,208 - 16,784,943 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000114136   ⟹   ENSRNOP00000089290
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1016,757,208 - 16,785,119 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000119281   ⟹   ENSRNOP00000078155
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1017,258,328 - 17,289,362 (-)Ensembl
mRatBN7.2 Ensembl1016,757,208 - 16,785,119 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000158746   ⟹   ENSRNOP00000099084
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1017,258,328 - 17,289,256 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000160942   ⟹   ENSRNOP00000110579
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1017,258,328 - 17,289,362 (-)Ensembl
RefSeq Acc Id: NM_001142652   ⟹   NP_001136124
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81017,258,317 - 17,289,362 (-)NCBI
mRatBN7.21016,754,002 - 16,785,049 (-)NCBI
Rnor_6.01017,048,251 - 17,075,139 (-)NCBI
Rnor_5.01016,945,337 - 16,972,071 (-)NCBI
RGSC_v3.41017,020,612 - 17,048,248 (-)RGD
Celera1016,410,661 - 16,437,321 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001136124 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein ACV53567 (Get FASTA)   NCBI Sequence Viewer  
  EDM04052 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000078155
  ENSRNOP00000078155.1
  ENSRNOP00000099084.1
  ENSRNOP00000110579.1
RefSeq Acc Id: NP_001136124   ⟸   NM_001142652
- UniProtKB: C9DQJ9 (UniProtKB/TrEMBL),   F7F6Y2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000032620   ⟸   ENSRNOT00000039398
Ensembl Acc Id: ENSRNOP00000095650   ⟸   ENSRNOT00000107123
Ensembl Acc Id: ENSRNOP00000078155   ⟸   ENSRNOT00000119281
Ensembl Acc Id: ENSRNOP00000089290   ⟸   ENSRNOT00000114136
Ensembl Acc Id: ENSRNOP00000099084   ⟸   ENSRNOT00000158746
Ensembl Acc Id: ENSRNOP00000110579   ⟸   ENSRNOT00000160942
Protein Domains
NHR   RING-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-C9DQJ9-F1-model_v2 AlphaFold C9DQJ9 1-546 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1564984 AgrOrtholog
BioCyc Gene G2FUF-25633 BioCyc
Ensembl Genes ENSRNOG00000027606 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000119281 ENTREZGENE
  ENSRNOT00000119281.2 UniProtKB/TrEMBL
  ENSRNOT00000158746.1 UniProtKB/TrEMBL
  ENSRNOT00000160942.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.120.920 UniProtKB/TrEMBL
  3.30.40.10 UniProtKB/TrEMBL
InterPro B30.2/SPRY_sf UniProtKB/TrEMBL
  Neu_Z UniProtKB/TrEMBL
  Neuralized UniProtKB/TrEMBL
  Znf_RING UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
KEGG Report rno:303019 UniProtKB/TrEMBL
NCBI Gene 303019 ENTREZGENE
PANTHER E3 UBIQUITIN-PROTEIN LIGASE NEURL1B UniProtKB/TrEMBL
  PTHR12429 UniProtKB/TrEMBL
Pfam Neuralized UniProtKB/TrEMBL
  zf-C3HC4_3 UniProtKB/TrEMBL
PhenoGen Neurl1b PhenoGen
PROSITE NHR UniProtKB/TrEMBL
  ZF_RING_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000027606 RatGTEx
SMART NEUZ UniProtKB/TrEMBL
Superfamily-SCOP RING/U-box UniProtKB/TrEMBL
UniProt A0ABK0LCL4_RAT UniProtKB/TrEMBL
  A0ABK0M596_RAT UniProtKB/TrEMBL
  C9DQJ9 ENTREZGENE, UniProtKB/TrEMBL
  F7F6Y2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-11-19 Neurl1b  neuralized E3 ubiquitin protein ligase 1B  Neurl1b  neuralized homolog 1B (Drosophila)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2013-04-18 Neurl1b  neuralized homolog 1B (Drosophila)  Neurl1B  neuralized homolog 1B (Drosophila)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1564984  similar to neuralized homolog   RGD1564984_predicted  similar to neuralized homolog (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1564984_predicted  similar to neuralized homolog (predicted)  LOC303019  similar to neuralized homolog  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC303019  similar to neuralized homolog      Symbol and Name status set to provisional 70820 PROVISIONAL