Porcn (porcupine O-acyltransferase) - Rat Genome Database

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Gene: Porcn (porcupine O-acyltransferase) Rattus norvegicus
Analyze
Symbol: Porcn
Name: porcupine O-acyltransferase
RGD ID: 1564947
Description: Predicted to enable Wnt-protein binding activity and palmitoleoyltransferase activity. Predicted to be involved in several processes, including Wnt protein secretion; Wnt signaling pathway; and regulation of postsynaptic membrane neurotransmitter receptor levels. Predicted to act upstream of or within glycoprotein metabolic process. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of AMPA glutamate receptor complex. Predicted to be active in endoplasmic reticulum; glutamatergic synapse; and membrane. Human ortholog(s) of this gene implicated in focal dermal hypoplasia. Orthologous to human PORCN (porcupine O-acyltransferase); PARTICIPATES IN Wnt signaling, canonical pathway; Wnt signaling pathway; INTERACTS WITH 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC317368; porcupine homolog; porcupine homolog (Drosophila); protein-cysteine N-palmitoyltransferase porcupine; protein-serine O-palmitoleoyltransferase porcupine; RGD1564947; similar to porcupine-D
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X16,957,811 - 16,970,440 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 EnsemblX16,957,810 - 16,970,439 (+)EnsemblGRCr8
mRatBN7.2X14,285,864 - 14,298,481 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX14,285,871 - 14,298,481 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_UtxX19,099,404 - 19,111,968 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X20,971,114 - 20,983,682 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X17,236,311 - 17,248,880 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X15,035,569 - 15,048,440 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX15,035,569 - 15,048,440 (+)Ensemblrn6Rnor6.0
Rnor_5.0X15,819,241 - 15,831,751 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4X26,317,388 - 26,330,177 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
CeleraX14,371,304 - 14,383,919 (+)NCBICelera
Cytogenetic MapXq12NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (EXP)
acetaldehyde  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (ISO)
beta-lapachone  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
C60 fullerene  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calyculin A  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
cisplatin  (ISO)
cobalt dichloride  (EXP)
curcumin  (EXP)
disodium selenite  (ISO)
diuron  (EXP)
doxorubicin  (ISO)
ethanol  (ISO)
fenvalerate  (EXP)
fipronil  (EXP)
flusilazole  (ISO)
Heptachlor epoxide  (ISO)
indinavir  (ISO)
lamivudine  (ISO)
lead diacetate  (ISO)
lead(0)  (ISO)
lithium atom  (ISO)
lithium hydride  (ISO)
methimazole  (EXP)
methyl methanesulfonate  (ISO)
nickel sulfate  (ISO)
nitrofen  (EXP)
ozone  (ISO)
palbociclib  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
pirinixic acid  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
progesterone  (ISO)
saquinavir  (ISO)
sodium arsenite  (ISO)
Soman  (EXP)
sulfadimethoxine  (EXP)
sunitinib  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (EXP)
titanium dioxide  (ISO)
Tributyltin oxide  (ISO)
trimellitic anhydride  (ISO)
vinclozolin  (EXP)
zidovudine  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Wntless in Wnt secretion: molecular, cellular and genetic aspects. Das S, etal., Front Biol (Beijing). 2012 Dec 1;7(6):587-593.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:10866835   PMID:12477932   PMID:17141155   PMID:22632720   PMID:24619415   PMID:24798332   PMID:26776514  


Genomics

Comparative Map Data
Porcn
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X16,957,811 - 16,970,440 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 EnsemblX16,957,810 - 16,970,439 (+)EnsemblGRCr8
mRatBN7.2X14,285,864 - 14,298,481 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX14,285,871 - 14,298,481 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_UtxX19,099,404 - 19,111,968 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X20,971,114 - 20,983,682 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X17,236,311 - 17,248,880 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X15,035,569 - 15,048,440 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX15,035,569 - 15,048,440 (+)Ensemblrn6Rnor6.0
Rnor_5.0X15,819,241 - 15,831,751 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4X26,317,388 - 26,330,177 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
CeleraX14,371,304 - 14,383,919 (+)NCBICelera
Cytogenetic MapXq12NCBI
PORCN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X48,508,992 - 48,520,814 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX48,508,574 - 48,520,814 (+)Ensemblhg38GRCh38
GRCh37X48,367,380 - 48,379,202 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X48,252,315 - 48,264,146 (+)NCBIBuild 36Build 36hg18NCBI36
CeleraX53,286,529 - 53,298,360 (-)NCBICelera
Cytogenetic MapXp11.23NCBI
HuRefX46,031,046 - 46,042,328 (+)NCBIHuRef
CHM1_1X48,398,636 - 48,410,463 (+)NCBICHM1_1
T2T-CHM13v2.0X47,918,004 - 47,929,826 (+)NCBIT2T-CHM13v2.0
Porcn
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X8,060,085 - 8,072,794 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX8,060,087 - 8,072,764 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38X8,193,846 - 8,206,548 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX8,193,848 - 8,206,525 (-)Ensemblmm10GRCm38
MGSCv37X7,770,976 - 7,783,651 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36X7,350,809 - 7,363,466 (-)NCBIMGSCv36mm8
CeleraX3,263,557 - 3,276,203 (+)NCBICelera
Cytogenetic MapXA1.1NCBI
cM MapX3.7NCBI
Porcn
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495554375,875 - 91,975 (+)Ensembl
ChiLan1.0NW_00495554375,870 - 91,575 (+)NCBIChiLan1.0ChiLan1.0
PORCN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X49,997,751 - 50,009,669 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X50,001,123 - 50,013,041 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X40,807,151 - 40,819,069 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X48,670,973 - 48,683,318 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX48,671,829 - 48,682,980 (+)EnsemblpanPan2panpan1.1
PORCN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X41,763,126 - 41,773,892 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX41,762,692 - 41,779,476 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_TashaX16,139,338 - 16,150,113 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0X41,899,285 - 41,910,059 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX41,899,264 - 42,014,404 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X41,886,207 - 41,896,981 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X41,874,498 - 41,885,274 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X41,968,061 - 41,978,839 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Porcn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X34,254,739 - 34,267,952 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936721495,093 - 508,347 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936721495,132 - 508,341 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PORCN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX42,653,789 - 42,669,517 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1X42,653,696 - 42,669,526 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X47,628,531 - 47,644,354 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PORCN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X45,639,836 - 45,652,301 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX45,640,125 - 45,651,974 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366607611,091,880 - 11,104,116 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Porcn
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624893327,587 - 339,877 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624893327,801 - 339,879 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Porcn
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1X15,606,358 - 15,617,521 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Porcn
16 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:42
Count of miRNA genes:35
Interacting mature miRNAs:40
Transcripts:ENSRNOT00000006491
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70165Bp64Blood pressure QTL 645.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X400149344939387Rat
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X197044046970440Rat
631666Iddm5Insulin dependent diabetes mellitus QTL 5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X811148653111486Rat
634325Bw13Body weight QTL 130body mass (VT:0001259)body weight (CMO:0000012)X400149324470521Rat

Markers in Region
DXS7465E  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8X16,970,183 - 16,970,285 (+)Marker Load Pipeline
mRatBN7.2X14,298,223 - 14,298,326 (+)MAPPERmRatBN7.2
Rnor_6.0X15,048,183 - 15,048,285NCBIRnor6.0
Rnor_5.0X15,831,494 - 15,831,596UniSTSRnor5.0
RGSC_v3.4X26,329,920 - 26,330,022UniSTSRGSC3.4
CeleraX14,383,662 - 14,383,764UniSTS
Cytogenetic MapXq13UniSTS
RH131962  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X14,298,187 - 14,298,369 (+)MAPPERmRatBN7.2
Rnor_6.0X15,048,147 - 15,048,328NCBIRnor6.0
Rnor_5.0X15,831,458 - 15,831,639UniSTSRnor5.0
RGSC_v3.4X26,329,884 - 26,330,065UniSTSRGSC3.4
CeleraX14,383,626 - 14,383,807UniSTS
RH 3.4 MapX135.7UniSTS
Cytogenetic MapXq13UniSTS
BF404034  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X14,291,247 - 14,291,401 (+)MAPPERmRatBN7.2
Rnor_6.0X15,041,203 - 15,041,356NCBIRnor6.0
Rnor_5.0X15,824,907 - 15,825,060UniSTSRnor5.0
RGSC_v3.4X26,322,780 - 26,322,933UniSTSRGSC3.4
CeleraX14,376,680 - 14,376,833UniSTS
RH 3.4 MapX128.1UniSTS
Cytogenetic MapXq13UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
17 12 70 172 91 90 59 98 59 6 371 202 12 151 85 122 31 26 26

Sequence


Ensembl Acc Id: ENSRNOT00000006491   ⟹   ENSRNOP00000006491
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblX16,957,835 - 16,970,436 (+)Ensembl
mRatBN7.2 EnsemblX14,285,871 - 14,298,481 (+)Ensembl
Rnor_6.0 EnsemblX15,035,569 - 15,048,440 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000078392   ⟹   ENSRNOP00000072781
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX14,285,871 - 14,298,481 (+)Ensembl
Rnor_6.0 EnsemblX15,035,571 - 15,048,436 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000103450   ⟹   ENSRNOP00000095116
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblX16,957,810 - 16,970,439 (+)Ensembl
mRatBN7.2 EnsemblX14,285,871 - 14,298,481 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000106543   ⟹   ENSRNOP00000076744
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblX16,957,810 - 16,970,439 (+)Ensembl
mRatBN7.2 EnsemblX14,285,871 - 14,298,481 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000118296   ⟹   ENSRNOP00000087944
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblX16,957,810 - 16,970,439 (+)Ensembl
mRatBN7.2 EnsemblX14,285,871 - 14,298,481 (+)Ensembl
RefSeq Acc Id: NM_001173355   ⟹   NP_001166826
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X16,957,834 - 16,970,440 (+)NCBI
mRatBN7.2X14,285,871 - 14,298,481 (+)NCBI
Rnor_6.0X15,035,569 - 15,048,440 (+)NCBI
Rnor_5.0X15,819,241 - 15,831,751 (+)NCBI
CeleraX14,371,304 - 14,383,919 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006256716   ⟹   XP_006256778
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X16,957,811 - 16,970,440 (+)NCBI
mRatBN7.2X14,285,864 - 14,298,481 (+)NCBI
Rnor_6.0X15,035,577 - 15,048,440 (+)NCBI
Rnor_5.0X15,819,241 - 15,831,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006256717   ⟹   XP_006256779
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X16,957,811 - 16,970,440 (+)NCBI
mRatBN7.2X14,285,864 - 14,298,481 (+)NCBI
Rnor_6.0X15,035,577 - 15,048,440 (+)NCBI
Rnor_5.0X15,819,241 - 15,831,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017602062   ⟹   XP_017457551
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X16,957,811 - 16,970,440 (+)NCBI
mRatBN7.2X14,285,864 - 14,298,475 (+)NCBI
Rnor_6.0X15,035,577 - 15,048,440 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001166826   ⟸   NM_001173355
- UniProtKB: A0A8I5Y6B0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006256778   ⟸   XM_006256716
- Peptide Label: isoform X1
- UniProtKB: A0A8I6A8A2 (UniProtKB/TrEMBL),   A6KP40 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006256779   ⟸   XM_006256717
- Peptide Label: isoform X2
- UniProtKB: A0A8I6APS0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017457551   ⟸   XM_017602062
- Peptide Label: isoform X3
- UniProtKB: D3ZVQ3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000006491   ⟸   ENSRNOT00000006491
Ensembl Acc Id: ENSRNOP00000072781   ⟸   ENSRNOT00000078392
Ensembl Acc Id: ENSRNOP00000076744   ⟸   ENSRNOT00000106543
Ensembl Acc Id: ENSRNOP00000087944   ⟸   ENSRNOT00000118296
Ensembl Acc Id: ENSRNOP00000095116   ⟸   ENSRNOT00000103450

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZVQ3-F1-model_v2 AlphaFold D3ZVQ3 1-461 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13701733
Promoter ID:EPDNEW_R12251
Type:multiple initiation site
Name:Porcn_1
Description:porcupine O-acyltransferase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0X15,035,579 - 15,035,639EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1564947 AgrOrtholog
BioCyc Gene G2FUF-2950 BioCyc
Ensembl Genes ENSRNOG00000004819 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000006491 ENTREZGENE
  ENSRNOT00000006491.9 UniProtKB/TrEMBL
  ENSRNOT00000103450 ENTREZGENE
  ENSRNOT00000103450.2 UniProtKB/TrEMBL
  ENSRNOT00000106543 ENTREZGENE
  ENSRNOT00000106543.2 UniProtKB/TrEMBL
  ENSRNOT00000118296 ENTREZGENE
  ENSRNOT00000118296.2 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:8362532 IMAGE-MGC_LOAD
InterPro LPLAT_7/PORCN-like UniProtKB/TrEMBL
  MBOAT_fam UniProtKB/TrEMBL
KEGG Report rno:317368 UniProtKB/TrEMBL
MGC_CLONE MGC:187578 IMAGE-MGC_LOAD
NCBI Gene 317368 ENTREZGENE
PANTHER PORCUPINE UniProtKB/TrEMBL
  PROTEIN-SERINE O-PALMITOLEOYLTRANSFERASE PORCUPINE UniProtKB/TrEMBL
Pfam MBOAT UniProtKB/TrEMBL
PhenoGen Porcn PhenoGen
RatGTEx ENSRNOG00000004819 RatGTEx
UniProt A0A8I5Y6B0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A8A2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6APS0 ENTREZGENE, UniProtKB/TrEMBL
  A6KP40 ENTREZGENE, UniProtKB/TrEMBL
  B0BN11_RAT UniProtKB/TrEMBL
  D3ZVQ3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-05-24 Porcn  porcupine O-acyltransferase  Porcn  porcupine homolog (Drosophila)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-07 Porcn  porcupine homolog (Drosophila)  RGD1564947_predicted  similar to porcupine-D (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1564947_predicted  similar to porcupine-D (predicted)  LOC317368  similar to porcupine-D  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC317368  similar to porcupine-D      Symbol and Name status set to provisional 70820 PROVISIONAL