Gnptab (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 7 | 24,687,923 - 24,754,821 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 22,800,502 - 22,866,336 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 22,800,485 - 22,866,933 (+) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 7 | 28,956,363 - 29,023,232 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 28,956,512 - 29,022,868 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 29,063,329 - 29,130,166 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 25,084,137 - 25,149,880 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 7 | 19,960,704 - 20,027,442 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | q13 | NCBI | | | | |
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GNPTAB (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 12 | 101,745,499 - 101,830,959 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 101,745,499 - 101,830,959 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 102,139,277 - 102,224,737 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 100,663,408 - 100,748,763 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 12 | 101,803,304 - 101,888,673 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | q23.2 | NCBI | | | | | HuRef | 12 | 99,198,884 - 99,284,601 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 102,105,957 - 102,191,339 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 101,706,726 - 101,792,185 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Gnptab (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 10 | 88,215,130 - 88,283,186 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 88,214,994 - 88,283,191 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 88,379,134 - 88,447,324 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 88,379,132 - 88,447,329 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 87,842,157 - 87,910,074 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 87,809,211 - 87,877,128 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 90,357,134 - 90,427,086 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | C1 | NCBI | | | | | cM Map | 10 | 43.86 | NCBI | | | | |
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Gnptab (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955405 | 37,107,542 - 37,136,993 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955405 | 37,107,902 - 37,136,993 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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GNPTAB (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 10 | 109,813,251 - 109,904,003 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 109,809,649 - 109,900,400 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 99,328,026 - 99,418,151 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 102,727,949 - 102,816,560 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 102,729,615 - 102,816,560 (-) | Ensembl | panpan1.1 | | panPan2 | |
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GNPTAB (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 15 | 40,659,108 - 40,724,498 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 15 | 40,631,279 - 40,704,365 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 15 | 41,027,451 - 41,092,978 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 15 | 41,313,158 - 41,378,930 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 15 | 41,285,330 - 41,379,054 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 15 | 40,567,331 - 40,640,075 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 15 | 40,676,876 - 40,742,356 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 15 | 40,950,892 - 41,016,624 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Gnptab (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404945 | 19,223,523 - 19,299,600 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936492 | 12,233,992 - 12,308,690 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936492 | 12,233,943 - 12,310,014 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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GNPTAB (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 5 | 82,361,872 - 82,460,814 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 82,264,640 - 82,460,819 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 86,352,843 - 86,413,181 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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GNPTAB (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 11 | 96,998,671 - 97,084,333 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 96,999,646 - 97,084,225 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 147,919,739 - 148,005,708 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Gnptab (Heterocephalus glaber - naked mole-rat) |
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