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Gene: Igsf9b (immunoglobulin superfamily, member 9B) Rattus norvegicus

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Symbol:

Igsf9b

Name:

immunoglobulin superfamily, member 9B

RGD ID:

1564717

Description:

Predicted to enable kinase binding activity. Predicted to be involved in synaptic membrane adhesion. Predicted to act upstream of or within homophilic cell adhesion via plasma membrane adhesion molecules and positive regulation of inhibitory postsynaptic potential. Is active in GABA-ergic synapse and postsynaptic specialization of symmetric synapse. Orthologous to human IGSF9B (immunoglobulin superfamily member 9B); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC315510; RGD1564717; similar to immunoglobulin superfamily, member 9

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	IGSF9B (immunoglobulin superfamily member 9B)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Igsf9b (immunoglobulin superfamily, member 9B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Igsf9b (immunoglobulin superfamily member 9B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	IGSF9B (immunoglobulin superfamily member 9B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	IGSF9B (immunoglobulin superfamily member 9B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Igsf9b (immunoglobulin superfamily member 9B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	IGSF9B (immunoglobulin superfamily member 9B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	IGSF9B (immunoglobulin superfamily member 9B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Igsf9b (immunoglobulin superfamily member 9B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Igsf9b (immunoglobulin superfamily member 9B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	IGSF9B (immunoglobulin superfamily member 9B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	IGSF9B (immunoglobulin superfamily member 9B)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Igsf9b (immunoglobulin superfamily, member 9B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Igsf9b (immunoglobulin superfamily, member 9B)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	igsf9ba (immunoglobulin superfamily, member 9Ba)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	igsf9ba (immunoglobulin superfamily, member 9Ba)	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	igsf9bb (immunoglobulin superfamily, member 9Bb)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	igsf9bb (immunoglobulin superfamily, member 9Bb)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	igcm-2	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	igcm-2	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	tutl	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	tutl	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	igsf9b	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	igsf9b	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	33,971,779 - 34,027,390 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	33,971,779 - 34,018,128 (+)	Ensembl				GRCr8
mRatBN7.2	8	25,712,644 - 25,769,481 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	25,712,644 - 25,758,554 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	29,754,600 - 29,800,497 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	28,048,896 - 28,094,798 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	25,928,882 - 25,974,781 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	28,352,497 - 28,398,659 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	28,352,772 - 28,387,383 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	28,371,484 - 28,417,964 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	26,905,723 - 26,941,081 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	27,199,908 - 27,245,801 (+)	NCBI		Celera
Cytogenetic Map	8	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4,4'-trichlorobiphenyl (ISO)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

alpha-Zearalanol (EXP)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (ISO)

carbamazepine (ISO)

cisplatin (ISO)

clobetasol (ISO)

Cuprizon (EXP)

Dibutyl phosphate (ISO)

doxorubicin (ISO)

esketamine (ISO)

ethanol (ISO)

folic acid (ISO)

FR900359 (ISO)

gentamycin (EXP)

glycidol (EXP)

lead(0) (ISO)

methapyrilene (ISO)

mono(2-ethylhexyl) phthalate (ISO)

N,N-diethyl-m-toluamide (EXP)

nitrofen (EXP)

paracetamol (EXP)

PCB138 (ISO)

perfluorooctanoic acid (EXP)

permethrin (EXP)

propofol (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell adhesion (IEA)

homophilic cell-cell adhesion (ISO)

nervous system development (IEA)

positive regulation of inhibitory postsynaptic potential (ISO)

synaptic membrane adhesion (ISO)

Cellular Component

dendrite (ISO)

GABA-ergic synapse (IDA,IEA,IEP,ISO)

inhibitory synapse (ISO)

neuron projection (IBA)

neuronal cell body (ISO)

postsynaptic density (IEA)

postsynaptic membrane (IEA)

postsynaptic specialization of symmetric synapse (IDA,IEP)

Molecular Function

kinase binding (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	The adhesion protein IgSF9b is coupled to neuroligin 2 via S-SCAM to promote inhibitory synapse development.	Woo J, etal., J Cell Biol. 2013 Jun 10;201(6):929-44. doi: 10.1083/jcb.201209132.

Genomics

Comparative Map Data

Igsf9b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	33,971,779 - 34,027,390 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	33,971,779 - 34,018,128 (+)	Ensembl				GRCr8
mRatBN7.2	8	25,712,644 - 25,769,481 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	25,712,644 - 25,758,554 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	29,754,600 - 29,800,497 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	28,048,896 - 28,094,798 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	25,928,882 - 25,974,781 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	28,352,497 - 28,398,659 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	28,352,772 - 28,387,383 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	28,371,484 - 28,417,964 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	26,905,723 - 26,941,081 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	27,199,908 - 27,245,801 (+)	NCBI		Celera
Cytogenetic Map	8	q13	NCBI

IGSF9B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	133,896,438 - 133,956,968 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	133,896,438 - 133,956,968 (-)	Ensembl			hg38	GRCh38
GRCh37	11	133,766,333 - 133,826,863 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	133,290,395 - 133,332,090 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	11	130,958,989 - 131,000,543 (-)	NCBI		Celera
Cytogenetic Map	11	q25	NCBI
HuRef	11	129,733,097 - 129,781,186 (-)	NCBI		HuRef
CHM1_1	11	133,666,445 - 133,714,597 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	133,938,732 - 133,999,751 (-)	NCBI		T2T-CHM13v2.0

Igsf9b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	27,210,400 - 27,268,845 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	27,210,500 - 27,268,842 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	27,299,104 - 27,357,549 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	27,299,204 - 27,357,546 (+)	Ensembl			mm10	GRCm38
MGSCv37	9	27,106,813 - 27,142,348 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	27,048,674 - 27,079,581 (+)	NCBI		MGSCv36	mm8
Celera	9	24,556,035 - 24,591,567 (+)	NCBI		Celera
Cytogenetic Map	9	A4	NCBI
cM Map	9	12.69	NCBI

Igsf9b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	34,724,220 - 34,767,970 (-)	Ensembl
ChiLan1.0	NW_004955412	34,712,556 - 34,828,013 (-)	NCBI	ChiLan1.0	ChiLan1.0

IGSF9B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	134,604,031 - 134,673,944 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	135,710,087 - 135,778,760 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	128,734,144 - 128,802,383 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	132,615,398 - 132,664,817 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	132,615,398 - 132,664,811 (-)	Ensembl			panPan2	panpan1.1

IGSF9B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	1,273,897 - 1,330,449 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	1,273,444 - 1,320,283 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	1,393,068 - 1,449,478 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	1,229,631 - 1,282,799 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	1,229,490 - 1,275,977 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	1,262,743 - 1,319,089 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	1,263,137 - 1,309,321 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	1,300,951 - 1,357,368 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Igsf9b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	115,640,774 - 115,700,847 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936684	1,902,077 - 1,992,890 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936684	1,902,111 - 1,956,106 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

IGSF9B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	60,478,029 - 60,521,465 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	60,467,321 - 60,521,463 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	67,034,855 - 67,060,060 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

IGSF9B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	124,969,228 - 125,021,334 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	124,974,027 - 125,021,200 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666043	1,024,070 - 1,075,009 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Igsf9b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624812	8,470,958 - 8,514,368 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624812	8,436,525 - 8,514,435 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Igsf9b
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	23,190,907 - 23,237,374 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Igsf9b
99 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	105
Count of miRNA genes:	85
Interacting mature miRNAs:	89
Transcripts:	ENSRNOT00000012391
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357398	Slep3	Serum leptin concentration QTL 3	3.43		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	8	17994105	50763951	Rat
2317030	Wbc5	White blood cell count QTL 5	3.21	0.005	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	8	16994642	61994642	Rat
12880044	Am9	Aortic mass QTL 9		0.007	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	8	10382540	55382540	Rat
2301416	Bp315	Blood pressure QTL 315		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	15952279	60952279	Rat
631842	Inf1	Infertility severity QTL 1	4.1	0.001	seminal gland mass (VT:0010524)	seminal vesicle wet weight (CMO:0001603)	8	31543661	76543661	Rat
2317032	Ginf2	Gastrointestinal inflammation QTL 2	3.21	0.005	liver integrity trait (VT:0010547)	liver granuloma severity score (CMO:0002157)	8	12964165	57964165	Rat
2317036	Livw3	Liver weight QTL 3	2.43	0.01	liver mass (VT:0003402)	liver weight to body weight ratio (CMO:0000633)	8	12964165	57964165	Rat
1598824	Memor4	Memory QTL 4	2.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	8	17993862	62252873	Rat
12880023	Bw184	Body weight QTL 184		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	8	10382540	55382540	Rat
2317051	Aia18	Adjuvant induced arthritis QTL 18	2.42		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	8	16994642	61994642	Rat
12880028	Cm103	Cardiac mass QTL 103		0.02	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	8	10382540	55382540	Rat
2317048	Ginf1	Gastrointestinal inflammation QTL 1	3.52	0.005	cecum mucosa thickness (VT:0010234)	enterocolitis severity score (CMO:0002138)	8	12964165	57964165	Rat
2302367	Slep5	Serum leptin concentration QTL 5	3.43		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	8	17994105	50763951	Rat
12880025	Cm102	Cardiac mass QTL 102		0.044	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	8	10382540	55382540	Rat

Markers in Region

BE119595

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	25,713,336 - 25,713,490 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	28,353,191 - 28,353,344	NCBI	Rnor6.0
Rnor_5.0	8	28,372,180 - 28,372,333	UniSTS	Rnor5.0
RGSC_v3.4	8	26,906,368 - 26,906,521	UniSTS	RGSC3.4
Celera	8	27,200,602 - 27,200,755	UniSTS
RH 3.4 Map	8	221.6	UniSTS
Cytogenetic Map	8	q13	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	9	66	157	59	58	27	83	27	6	311	179	11	136	81	92	31	14	14

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001376950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436490	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001054496	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226347	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226351	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226352	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242744	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595987	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595988	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603590	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603591	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603592	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_235959	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005487809	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005487810	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000012391 ⟹ ENSRNOP00000012391

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	33,971,779 - 34,018,029 (+)	Ensembl
mRatBN7.2 Ensembl	8	25,712,644 - 25,758,554 (+)	Ensembl
Rnor_6.0 Ensembl	8	28,352,772 - 28,387,383 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000145454 ⟹ ENSRNOP00000100508

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	33,971,779 - 34,007,824 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000152767 ⟹ ENSRNOP00000100692

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	33,971,779 - 34,007,824 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000166754 ⟹ ENSRNOP00000101985

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	33,971,779 - 34,018,128 (+)	Ensembl

RefSeq Acc Id:

NM_001376950 ⟹ NP_001363879

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	33,971,779 - 34,017,680 (+)	NCBI
mRatBN7.2	8	25,712,644 - 25,758,554 (+)	NCBI

RefSeq Acc Id:

XM_006242743 ⟹ XP_006242805

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	33,971,802 - 34,027,390 (+)	NCBI
mRatBN7.2	8	25,712,663 - 25,769,481 (+)	NCBI
Rnor_6.0	8	28,352,498 - 28,398,659 (+)	NCBI
Rnor_5.0	8	28,371,484 - 28,417,964 (+)	NCBI

Sequence:

show sequence

GCGGGCCACAGGACAAGCTCAGCTAGGCTTCACCGTGGACCTGGCTGCGCTCTGCCTCCGTTGG
CAGTGCAGGTGCCGCTGCGCCGGGGCCCGGGAGGCTGCGCGCGCCGAGACGAGAGGAGCCAGGG
AGGGATGGAGAGCGGGCCGCCCGGGCTACAGAAGCACCGGCAAGGGGCGTAGGCGGGCGAGAAG
CGGGCATTGAGGCACCAGAAGTGTGCAGACGCAGGAGCACTTTGCGATAGGATGAGGCTCTTGG
CTGGCGCGCGGTAGTACTATGATTTGGTATGTGGCCACTTTGATAGCAAGTGTGATCAGCACCC
GAGGTCTTGTGGCTCAAGTTGCCCACGGCCTGCGAGAGGAACCTGAGTTTGTGACCGCTCGTGC
CGGCGAAGGTGTGGTTCTGCGATGCGACGTCATCCACCCAGTGACAGGACAGCCCCCACCCTAT
GTCGTAGAGTGGTTCAAGTTTGGGGTCCCCATCCCTATCTTCATCAAGTTTGGCTACTATCCCC
CGCATGTGGACCCTGAGTATGCAGGCCGGGCCAGTCTTCATGATAAAGCATCTCTGCGGCTGGA
GCAGGTGCGCTCTGAGGACCAGGGTTGGTACGAGTGCAAAGTGCTCATGCTGGATCAGCAGTAT
GACACATTCCACAACGGCAGCTGGGTCCATCTCACCATTAACGCCCCTCCCACCTTTACAGAAA
CACCCCCCCAGTACATCGAGGCCAAGGAAGGTGGGAGTATTACCATGACTTGCACGGCTTTTGG
GAACCCTAAACCCATCGTCACCTGGCTCAAGGAAGGGACCCTCCTCAGTGCTAGTGGAAAGTAT
CAGGTGAGTGACGGTAGCCTAACGGTGACGTCAGTCAGTCGGGAGGACAGAGGCGCCTATACCT
GTCGAGCATATAGCATCCAGGGTGAGGCTGTGCACACAACCCATCTGCTTGTTCAAGGGCCTCC
CTTCATTGTTTCCCCTCCTGAGAACATCACCGTCAACATCTCCCAGGATGCTCTGCTTACCTGC
AGGGCAGAGGCGTATCCCGGCAACCTCACCTACACCTGGTACTGGCAGGATGAGAACGTCTACT
TCCAGAATGACCTGAAGCTAAGGGTGCGGATCCTGATTGATGGGACACTGATCATCTTCCGAGT
GAAGCCAGAGGATGCTGGGAAGTATACCTGTGTCCCTAGCAACAGCCTGGGGCGTTCCCCCTCT
GCCTCAGCATACCTGACTGTGCAGTACCCAGCCCGTGTCCTCAACATGCCCCCTGTAATTTATG
TGCCCGTGGGAATCCATGGCTATATCCGCTGTCCTGTGGATGCAGAGCCGCCTGCTACTGTGGT
GAAGTGGAATAAGGATGGCCGGCCCCTGCAGGTAGAGAAGAACTTGGGTTGGACCTTGATGGAG
GATGGCTCTATTCGAATTGAGGAGGCCACAGAGGAGGCTCTTGGCACTTACACCTGTGTGCCTT
ACAACACTTTGGGGACCATGGGCCAGTCTGCCCCTGCCCGGCTCGTCCTGAAGGACCCCCCGTA
TTTCACGGTGCTACCCGGCTGGGAGTACAGGCAGGAGGCTGGCCGGGAGCTGCTCATCCCCTGT
GCAGCTGCAGGGGACCCCTTCCCTGTCATCACCTGGAGGAAGGTAGGGAAGCCCAGCAGAAGCA
AGCACAATGCACTGCCCAGCGGGAGTCTGCAGTTTCGTGCCCTGAGTAAGGAGGACCACGGGGA
GTGGGAATGTGTTGCCACCAACGTGGTCACAAGCATCACTGCCAGCACCCACCTCACTGTCATC
GGCACCAGTCCCCATGCCCCAGGCAGTGTCCGGGTCCATGTCTCCATGACAACTGCCAACGTGT
CCTGGGAGCCAGGCTATGATGGAGGCTATGAGCAGACATTCTCAGTTTGGTACGGACCTCTGAT
GAAGCGGGCTCAGTTTGGGCCCCACGACTGGCTGTCCTTGTCAGTGCCACTGGGCCCCAGCTGG
CTGCTGGTAGACAGCCTGGAGCCTGAGACTGCATACCAGTTCAGTGTCCTGGCCCAGAACAGGC
TGGGGACCAGCGCCTTCAGTGAGGTGGTCACTGTGAACACTTTAGCATTCCCTGTTACAACTCC
AGAACCCCTGGTGCTGGTGACCCCACCAAGGTGCCTCACAGCCAACCGGACCCAGCAGGGTGTG
CTCCTGTCCTGGCTCCCTCCTGCCAACCACAGCTTCCCCATCGACCGCTACATCATGGAGTTCC
GAGTTGGGGAGCGCTGGGAGATGCTAGATGATGCCATACCAGGCACCGATGGAGAATTTTTTGC
CAAGGATCTGTCACAGGATACCTGGTATGAGTTCCGGGTTTTGGCTGTCATGCAGGATCTGATC
AGCGAGCCCAGCAACATCGCCGGTGTCTCCAGCACAGACATCTTCCCGCAGCCGGACCTGACTG
ATGATGGGCTGGCCCGGCCAGTGTTGGCTGGGATAGTGGCCACCATCTGCTTCCTGGCGGCTGC
CATCCTCTTCAGCACTCTGGCTGCCTGCTTTGTCAACAAGCAGCGCAAACGCAAACTCAAGCGG
AAGAAAGATCCTCCGCTCTCCATCACTCACTGTAGGAAGAGTCTTGAGTCTCCCTTGTCCTCTG
GCAAGGTGAGTCCTGAGAGTATCCGCACACTCCGAGCCCCGTCTGAATCCTCTGACGACCAGGG
CCAGCCAGCAGCCAAGAGGATGCTGAGCCCTACAAGGGAGAAAGAGCTGTCCCTGTACAAAAAA
ACCAAGAGGGCTATCAGCAGCAGGAAGTATAGCGTGGCCAAGGCTGAGGCCGAAGCAGAGGCCA
CCACACCCATTGAACTGATCAGTAGAGGCCCGGATGGCCGCTTCGTCATGGGCCCGTCGGAGAT
GGAGCCCTCTGTGAAGGGCCGGCGAATCGAAGGCTTCCCCTTCGCTGAGGAGACGGACATGTAC
CCTGAGTTCCGGCAGTCAGATGAGGAGAATGAAGACCCACTGGTACCCACGTCTGTGGCTGCTC
TGAAGCCTCAACTGACCCCTATGTCTTCCAGCCAGGACTCTTACCTGCCACCACCAGCATACAG
CCCTCGGTTCCAGCCTCGAGGGCTCGAGGGCCCCAGTGGACTGGGAGGACGACTCCAGGCTACT
GGCCAAGCGAGGCCTCCTGCCCCTCGGCCCTTCCAGCATGGCCAGTATTATGGGTACCTCAGCA
GCAGCAGCCCTGGGGAGGTGGAGCCTCCACCCTTCTATATGCCAGAAGTGGGCAGCCCCTTGAG
CTCAGTCATGTCGTCCCCACCCCTGCACACCGAGGGGCCTTTTGGCCACCCTACCATCCCTGAG
GAAAACGGAGAGAATGCTTCTAACAGCACTTTGCCCTTGACTCAGACACCTACAGGAGGGCGCT
CCCCTGAGCCCTGGGGCCGGCCAGAATTTCCCTTTGGGGGACTGGAGACCCCAGCTATGATGTT
CCCCCACCAGCTGCACCCCTGTGATGTGGCCGAGAGTTTGCAGCCCAAGCCCTGTCTGCCCCGA
GGACTGCCCCCAGCCCCGCTCCAGGTGCCTGCAGCCTATCCAGGCATGCTATCTCTGGAGGCAC
CAAAGGGCTGGGTAGGCAAGTCACCTGGCAGGGGTCCCATCCCGGCGCCCCCTGCCACCAAGTG
GCAGGAAAGACCTATGCAACCTCTGGTCAGCCAAGGGCAGCTAAGACATACCAGCCAAGGTATG
GGGATACCGGTGTTGCCTTACCCGGAGCCAGCCGAGCCCGGGGGGCACGGTGGCCCCAGCACAT
TTGGCCTGGACACTCGGTGGTATGAGCCCCAGCCCCGGCCCCGGCCCAGCCCCCGGCAGGCCCG
GCGTGCCGAGCCCAGTTTACATCAAGTGGTGCTACAGCCCTCCCGGCTCTCACCTCTGACCCAA
AGCCCCCTTAGTTCCCGCACTGGCTCCCCTGAGCTCGCTGCTCGTGCCCGACCTCGACCAGGCC
TCCTGCAGCAGGCAGAGATGTCAGAGATCACCCTGCAGCCGCCAGCCGCGGTCAGCTTCTCTCG
CAAGTCAACACCATCATCCACGGGATCTCCTTCACAGAGCAGCCGCAGTGGGAGCCCCAGCTAC
AGGCCCACAATGGGCTTCACTACTCTGGCCACAGGCTACCCTTCTCCACCACCTGGCCCTGCCC
CTCCGGCGCCAGGGGACAACTTGGATGTGTTTGGACAGACGCCTTCCCCTCGGAGGATGGGGGA
GGAGCCACTCCGGCCAGAGCCCCCAACAACCTTACCTACTTCAGGACGGTTCTGCCTCCCAGGA
TCAGCAGCTTCCCAACTCTCAGGTTCTGTGGCCCGACGAAGCTGTCTGCCTCAGAAAGAAGAAG
AGACACTCTCGTCCTGATCCCTTTGCCCGGCTTTCAGACTTGTGCCACCGTCAGCTTCCAGAAG
ACCAGACGGCCATCCTCAACAGTGTGGATCATGATGACCCAGGCCACGCTACTCTGCTATGACT
TGACACCATTCTAAATGTCCCCAGGGTGGGGTGCTAGGCTAAAGGGGGCAGAGAGGGACCATTG
TACAGGGCCTTGTCCTCCTCTGCCCATCATGGGATGGCTCAGGCCCCTGACCTGTGTGTATTCC
CTCATGCCAGTGGGGAATACACCCACTATCTAGCCAGCTAGCCTTGCCCATGGGACAGAGGACT
AGGGGAAGAGCTTTTAACTGTGGGTCAGAGTTGGGAGTATGTGGGGATAGAAGACATCTGTCTC
TATGCCACCTCTCCCACTTTACTAGATTGGTTCTTCTCACCTCTTCCAACGTCTTAGGAAGTGA
GGAAACGGAAAGCAATGGCTTTTAGTAATGCATTTGTTTCACTTTTCCAAGTCCTGGGAGGGGG
TTAGAGTTATATCCGACCCTCCTAACTCCACATATATATAGATATAGATACAAATGCA

hide sequence

RefSeq Acc Id:

XM_017595986 ⟹ XP_017451475

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	33,971,801 - 34,007,378 (+)	NCBI
mRatBN7.2	8	25,712,662 - 25,748,256 (+)	NCBI
Rnor_6.0	8	28,352,497 - 28,388,368 (+)	NCBI

Sequence:

show sequence

GGCGGGCCACAGGACAAGCTCAGCTAGGCTTCACCGTGGACCTGGCTGCGCTCTGCCTCCGTTG
GCAGTGCAGGTGCCGCTGCGCCGGGGCCCGGGAGGCTGCGCGCGCCGAGACGAGAGGAGCCAGG
GAGGGATGGAGAGCGGGCCGCCCGGGCTACAGAAGCACCGGCAAGGGGCGTAGGCGGGCGAGAA
GCGGGCATTGAGGCACCAGAAGTGTGCAGACGCAGGAGCACTTTGCGATAGGATGAGGCTCTTG
GCTGGCGCGCGGTAGTACTATGATTTGGTATGTGGCCACTTTGATAGCAAGTGTGATCAGCACC
CGAGGTCTTGTGGCTCAAGTTGCCCACGGCCTGCGAGAGGAACCTGAGTTTGTGACCGCTCGTG
CCGGCGAAGGTGTGGTTCTGCGATGCGACGTCATCCACCCAGTGACAGGACAGCCCCCACCCTA
TGTCGTAGAGTGGTTCAAGTTTGGGGTCCCCATCCCTATCTTCATCAAGTTTGGCTACTATCCC
CCGCATGTGGACCCTGAGTATGCAGGCCGGGCCAGTCTTCATGATAAAGCATCTCTGCGGCTGG
AGCAGGTGCGCTCTGAGGACCAGGGTTGGTACGAGTGCAAAGTGCTCATGCTGGATCAGCAGTA
TGACACATTCCACAACGGCAGCTGGGTCCATCTCACCATTAACGCCCCTCCCACCTTTACAGAA
ACACCCCCCCAGTACATCGAGGCCAAGGAAGGTGGGAGTATTACCATGACTTGCACGGCTTTTG
GGAACCCTAAACCCATCGTCACCTGGCTCAAGGAAGGGACCCTCCTCAGTGCTAGTGGAAAGTA
TCAGGTGAGTGACGGTAGCCTAACGGTGACGTCAGTCAGTCGGGAGGACAGAGGCGCCTATACC
TGTCGAGCATATAGCATCCAGGGTGAGGCTGTGCACACAACCCATCTGCTTGTTCAAGGGCCTC
CCTTCATTGTTTCCCCTCCTGAGAACATCACCGTCAACATCTCCCAGGATGCTCTGCTTACCTG
CAGGGCAGAGGCGTATCCCGGCAACCTCACCTACACCTGGTACTGGCAGGATGAGAACGTCTAC
TTCCAGAATGACCTGAAGCTAAGGGTGCGGATCCTGATTGATGGGACACTGATCATCTTCCGAG
TGAAGCCAGAGGATGCTGGGAAGTATACCTGTGTCCCTAGCAACAGCCTGGGGCGTTCCCCCTC
TGCCTCAGCATACCTGACTGTGCAGTACCCAGCCCGTGTCCTCAACATGCCCCCTGTAATTTAT
GTGCCCGTGGGAATCCATGGCTATATCCGCTGTCCTGTGGATGCAGAGCCGCCTGCTACTGTGG
TGAAGTGGAATAAGGATGGCCGGCCCCTGCAGGTAGAGAAGAACTTGGGTTGGACCTTGATGGA
GGATGGCTCTATTCGAATTGAGGAGGCCACAGAGGAGGCTCTTGGCACTTACACCTGTGTGCCT
TACAACACTTTGGGGACCATGGGCCAGTCTGCCCCTGCCCGGCTCGTCCTGAAGGACCCCCCGT
ATTTCACGGTGCTACCCGGCTGGGAGTACAGGCAGGAGGCTGGCCGGGAGCTGCTCATCCCCTG
TGCAGCTGCAGGGGACCCCTTCCCTGTCATCACCTGGAGGAAGGTAGGGAAGCCCAGCAGAAGC
AAGCACAATGCACTGCCCAGCGGGAGTCTGCAGTTTCGTGCCCTGAGTAAGGAGGACCACGGGG
AGTGGGAATGTGTTGCCACCAACGTGGTCACAAGCATCACTGCCAGCACCCACCTCACTGTCAT
CGGCACCAGTCCCCATGCCCCAGGCAGTGTCCGGGTCCATGTCTCCATGACAACTGCCAACGTG
TCCTGGGAGCCAGGCTATGATGGAGGCTATGAGCAGACATTCTCAGTTTGGTACGGACCTCTGA
TGAAGCGGGCTCAGTTTGGGCCCCACGACTGGCTGTCCTTGTCAGTGCCACTGGGCCCCAGCTG
GCTGCTGGTAGACAGCCTGGAGCCTGAGACTGCATACCAGTTCAGTGTCCTGGCCCAGAACAGG
CTGGGGACCAGCGCCTTCAGTGAGGTGGTCACTGTGAACACTTTAGCATTCCCTGTTACAACTC
CAGAACCCCTGGTGCTGGTGACCCCACCAAGGTGCCTCACAGCCAACCGGACCCAGCAGGGTGT
GCTCCTGTCCTGGCTCCCTCCTGCCAACCACAGCTTCCCCATCGACCGCTACATCATGGAGTTC
CGAGTTGGGGAGCGCTGGGAGATGCTAGATGATGCCATACCAGGCACCGATGGAGAATTTTTTG
CCAAGGATCTGTCACAGGATACCTGGTATGAGTTCCGGGTTTTGGCTGTCATGCAGGATCTGAT
CAGCGAGCCCAGCAACATCGCCGGTGTCTCCAGCACAGACATCTTCCCGCAGCCGGACCTGACT
GATGATGGGCTGGCCCGGCCAGTGTTGGCTGGGATAGTGGCCACCATCTGCTTCCTGGCGGCTG
CCATCCTCTTCAGCACTCTGGCTGCCTGCTTTGTCAACAAGCAGCGCAAACGCAAACTCAAGCG
GAAGAAAGATCCTCCGCTCTCCATCACTCACTGTAGGAAGAGTCTTGAGTCTCCCTTGTCCTCT
GGCAAGGTGAGTCCTGAGAGTATCCGCACACTCCGAGCCCCGTCTGAATCCTCTGACGACCAGG
GCCAGCCAGCAGCCAAGAGGATGCTGAGCCCTACAAGGGAGAAAGAGCTGTCCCTGTACAAAAA
AACCAAGAGGGCTATCAGCAGCAGGAAGTATAGCGTGGCCAAGGCTGAGGCCGAAGCAGAGGCC
ACCACACCCATTGAACTGATCAGTAGAGGCCCGGATGGCCGCTTCGTCATGGGCCCGTCGGAGA
TGGAGCCCTCTGTGAAGGGCCGGCGAATCGAAGGCTTCCCCTTCGCTGAGGAGACGGACATGTA
CCCTGAGTTCCGGCAGTCAGATGAGGAGAATGAAGACCCACTGGTACCCACGTCTGTGGCTGCT
CTGAAGCCTCAACTGACCCCTATGTCTTCCAGCCAGGACTCTTACCTGCCACCACCAGCATACA
GCCCTCGGTTCCAGCCTCGAGGGCTCGAGGGCCCCAGTGGACTGGGAGGACGACTCCAGGCTAC
TGGCCAAGCGAGGCCTCCTGCCCCTCGGCCCTTCCAGCATGGCCAGTATTATGGGTACCTCAGC
AGCAGCAGCCCTGGGGAGGTGGAGCCTCCACCCTTCTATATGCCAGAAGTGGGCAGCCCCTTGA
GCTCAGTCATGTCGTCCCCACCCCTGCACACCGAGGGGCCTTTTGGCCACCCTACCATCCCTGA
GGAAAACGGAGAGAATGCTTCTAACAGCACTTTGCCCTTGACTCAGACACCTACAGGAGGGCGC
TCCCCTGAGCCCTGGGGCCGGCCAGAATTTCCCTTTGGGGGACTGGAGACCCCAGCTATGATGT
TCCCCCACCAGCTGCACCCCTGTGATGTGGCCGAGAGTTTGCAGCCCAAGCCCTGTCTGCCCCG
AGGACTGCCCCCAGCCCCGCTCCAGGTGCCTGCAGCCTATCCAGGCATGCTATCTCTGGAGGCA
CCAAAGGGCTGGGTAGGCAAGTCACCTGGCAGGGGTCCCATCCCGGCGCCCCCTGCCACCAAGT
GGCAGGAAAGACCTATGCAACCTCTGGTCAGCCAAGGGCAGCTAAGACATACCAGCCAAGGTAT
GGGGATACCGGTGTTGCCTTACCCGGAGCCAGCCGAGCCCGGGGGGCACGGTGGCCCCAGCACA
TTTGGCCTGGACACTCGGTGGTATGAGCCCCAGCCCCGGCCCCGGCCCAGCCCCCGGCAGGCCC
GGCGTGCCGAGCCCAGTTTACATCAAGTGGTGCTACAGCCCTCCCGGCTCTCACCTCTGACCCA
AAGCCCCCTTAGTTCCCGCACTGGCTCCCCTGAGCTCGCTGCTCGTGCCCGACCTCGACCAGGC
CTCCTGCAGCAGGCAGAGATGTCAGAGATCACCCTGCAGCCGCCAGCCGCGGTCAGCTTCTCTC
GCAAGTCAACACCATCATCCACGGGATCTCCTTCACAGAGCAGCCGCAGTGGGAGCCCCAGCTA
CAGGCCCACAATGGGCTTCACTACTCTGGCCACAGGCTACCCTTCTCCACCACCTGGCCCTGCC
CCTCCGGCGCCAGGGGACAACTTGGATGTGTTTGGACAGACGCCTTCCCCTCGGAGGATGGGGG
AGGAGCCACTCCGGCCAGAGCCCCCAACAACCTTACCTACTTCAGGGAAGCTACAGAGAGACAG
ACAGACAGACAAGCTCCCGAGATCTGCTCGTCTGAGAGAGCACACACTGTACTGTAGCAGCTGG
TATTCCAGGTACCAGTCGGCCTGGACGCCTGTCTGTGCCTCTTCTGTCCGTCTGCACTCCCCTT
TCCTCCTAGCCTTTGTTCCTTTCGAAGTCAGTCCGTCTTCCTCTTTTCCTTTTCCGTCGCCTTG
AGGTTGACCCAGTTTGCTCTGAAGAGCCTGCCATGCCTCTGTTGTGCGCACCCCCACCCTCTTC
CCCTGCCTTGCCCTCATCCTTTCTCCCTTCTCTTTCTCAGTCTTTTTCTTGGGTTCAGTCCTTT
GGCCTCTTCTCTTGGTGTGACCAGAGGAGGCTGTCCTGGTGGGGATGGGGGTG

hide sequence

RefSeq Acc Id:

XM_017595988 ⟹ XP_017451477

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	33,971,802 - 34,017,165 (+)	NCBI
mRatBN7.2	8	25,712,663 - 25,758,035 (+)	NCBI
Rnor_6.0	8	28,352,497 - 28,398,086 (+)	NCBI

Sequence:

show sequence

GGCGGGCCACAGGACAAGCTCAGCTAGGCTTCACCGTGGACCTGGCTGCGCTCTGCCTCCGTTG
GCAGTGCAGGTGCCGCTGCGCCGGGGCCCGGGAGGCTGCGCGCGCCGAGACGAGAGGAGCCAGG
GAGGGATGGAGAGCGGGCCGCCCGGGCTACAGAAGCACCGGCAAGGGGCGTAGGCGGGCGAGAA
GCGGGCATTGAGGCACCAGAAGTGTGCAGACGCAGGAGCACTTTGCGATAGGATGAGGCTCTTG
GCTGGCGCGCGGTAGTACTATGATTTGGTATGTGGCCACTTTGATAGCAAGTGTGATCAGCACC
CGAGGTCTTGTGGCTCAAGTTGCCCACGGCCTGCGAGAGGAACCTGAGTTTGTGACCGCTCGTG
CCGGCGAAGGTGTGGTTCTGCGATGCGACGTCATCCACCCAGTGACAGGACAGCCCCCACCCTA
TGTCGTAGAGTGGTTCAAGTTTGGGGTCCCCATCCCTATCTTCATCAAGTTTGGCTACTATCCC
CCGCATGTGGACCCTGAGTATGCAGGCCGGGCCAGTCTTCATGATAAAGCATCTCTGCGGCTGG
AGCAGGTGCGCTCTGAGGACCAGGGTTGGTACGAGTGCAAAGTGCTCATGCTGGATCAGCAGTA
TGACACATTCCACAACGGCAGCTGGGTCCATCTCACCATTAACGCCCCTCCCACCTTTACAGAA
ACACCCCCCCAGTACATCGAGGCCAAGGAAGGTGGGAGTATTACCATGACTTGCACGGCTTTTG
GGAACCCTAAACCCATCGTCACCTGGCTCAAGGAAGGGACCCTCCTCAGTGCTAGTGGAAAGTA
TCAGGTGAGTGACGGTAGCCTAACGGTGACGTCAGTCAGTCGGGAGGACAGAGGCGCCTATACC
TGTCGAGCATATAGCATCCAGGGTGAGGCTGTGCACACAACCCATCTGCTTGTTCAAGGGCCTC
CCTTCATTGTTTCCCCTCCTGAGAACATCACCGTCAACATCTCCCAGGATGCTCTGCTTACCTG
CAGGGCAGAGGCGTATCCCGGCAACCTCACCTACACCTGGTACTGGCAGGATGAGAACGTCTAC
TTCCAGAATGACCTGAAGCTAAGGGTGCGGATCCTGATTGATGGGACACTGATCATCTTCCGAG
TGAAGCCAGAGGATGCTGGGAAGTATACCTGTGTCCCTAGCAACAGCCTGGGGCGTTCCCCCTC
TGCCTCAGCATACCTGACTGTGCAGTACCCAGCCCGTGTCCTCAACATGCCCCCTGTAATTTAT
GTGCCCGTGGGAATCCATGGCTATATCCGCTGTCCTGTGGATGCAGAGCCGCCTGCTACTGTGG
TGAAGTGGAATAAGGATGGCCGGCCCCTGCAGGTAGAGAAGAACTTGGGTTGGACCTTGATGGA
GGATGGCTCTATTCGAATTGAGGAGGCCACAGAGGAGGCTCTTGGCACTTACACCTGTGTGCCT
TACAACACTTTGGGGACCATGGGCCAGTCTGCCCCTGCCCGGCTCGTCCTGAAGGACCCCCCGT
ATTTCACGGTGCTACCCGGCTGGGAGTACAGGCAGGAGGCTGGCCGGGAGCTGCTCATCCCCTG
TGCAGCTGCAGGGGACCCCTTCCCTGTCATCACCTGGAGGAAGGTAGGGAAGCCCAGCAGAAGC
AAGCACAATGCACTGCCCAGCGGGAGTCTGCAGTTTCGTGCCCTGAGTAAGGAGGACCACGGGG
AGTGGGAATGTGTTGCCACCAACGTGGTCACAAGCATCACTGCCAGCACCCACCTCACTGTCAT
CGGCACCAGTCCCCATGCCCCAGGCAGTGTCCGGGTCCATGTCTCCATGACAACTGCCAACGTG
TCCTGGGAGCCAGGCTATGATGGAGGCTATGAGCAGACATTCTCAGTTTGGTACGGACCTCTGA
TGAAGCGGGCTCAGTTTGGGCCCCACGACTGGCTGTCCTTGTCAGTGCCACTGGGCCCCAGCTG
GCTGCTGGTAGACAGCCTGGAGCCTGAGACTGCATACCAGTTCAGTGTCCTGGCCCAGAACAGG
CTGGGGACCAGCGCCTTCAGTGAGGTGGTCACTGTGAACACTTTAGCATTCCCTGTTACAACTC
CAGAACCCCTGGTGCTGGTGACCCCACCAAGGTGCCTCACAGCCAACCGGACCCAGCAGGGTGT
GCTCCTGTCCTGGCTCCCTCCTGCCAACCACAGCTTCCCCATCGACCGCTACATCATGGAGTTC
CGAGTTGGGGAGCGCTGGGAGATGCTAGATGATGCCATACCAGGCACCGATGGAGAATTTTTTG
CCAAGGATCTGTCACAGGATACCTGGTATGAGTTCCGGGTTTTGGCTGTCATGCAGGATCTGAT
CAGCGAGCCCAGCAACATCGCCGGTGTCTCCAGCACAGACATCTTCCCGCAGCCGGACCTGACT
GATGATGGGCTGGCCCGGCCAGTGTTGGCTGGGATAGTGGCCACCATCTGCTTCCTGGCGGCTG
CCATCCTCTTCAGCACTCTGGCTGCCTGCTTTGTCAACAAGCAGCGCAAACGCAAACTCAAGCG
GAAGAAAGATCCTCCGCTCTCCATCACTCACTGTAGGAAGAGTCTTGAGTCTCCCTTGTCCTCT
GGCAAGGTGAGTCCTGAGAGTATCCGCACACTCCGAGCCCCGTCTGAATCCTCTGACGACCAGG
GCCAGCCAGCAGCCAAGAGGATGCTGAGCCCTACAAGGGAGAAAGAGCTGTCCCTGTACAAAAA
AACCAAGAGGGCTATCAGCAGCAGGAAGTATAGCGTGGCCAAGGCTGAGGCCGAAGCAGAGGCC
ACCACACCCATTGAACTGATCAGTAGAGGCCCGGATGGCCGCTTCGTCATGGGCCCGTCGGAGA
TGGAGCCCTCTGTGAAGGGCCGGCGAATCGAAGGCTTCCCCTTCGCTGAGGAGACGGACATGTA
CCCTGAGTTCCGGCAGTCAGATGAGGAGAATGAAGACCCACTGGTACCCACGTCTGTGGCTGCT
CTGAAGCCTCAACTGACCCCTATGTCTTCCAGCCAGGACTCTTACCTGCCACCACCAGCATACA
GCCCTCGGTTCCAGCCTCGAGGGCTCGAGGGCCCCAGTGGACTGGGAGGACGACTCCAGGCTAC
TGGCCAAGCGAGGCCTCCTGCCCCTCGGCCCTTCCAGCATGGCCAGTATTATGGGTACCTCAGC
AGCAGCAGCCCTGGGGAGGTGGAGCCTCCACCCTTCTATATGCCAGAAGTGGGCAGCCCCTTGA
GCTCAGTCATGTCGTCCCCACCCCTGCACACCGAGGGGCCTTTTGGCCACCCTACCATCCCTGA
GGAAAACGGAGAGAATGCTTCTAACAGCACTTTGCCCTTGACTCAGACACCTACAGGAGGGCGC
TCCCCTGAGCCCTGGGGCCGGCCAGAATTTCCCTTTGGGGGACTGGAGACCCCAGCTATGATGT
TCCCCCACCAGCTGCACCCCTGTGATGTGGCCGAGAGTTTGCAGCCCAAGCCCTGTCTGCCCCG
AGGACTGCCCCCAGCCCCGCTCCAGGTGCCTGCAGCCTATCCAGGCATGCTATCTCTGGAGGCA
CCAAAGGGCTGGGTAGGCAAGTCACCTGGCAGGGGTCCCATCCCGGCGCCCCCTGCCACCAAGT
GGCAGGAAAGACCTATGCAACCTCTGGTCAGCCAAGGGCAGCTAAGACATACCAGCCAAGGTAT
GGGGATACCGGTGTTGCCTTACCCGGAGCCAGCCGAGCCCGGGGGGCACGGTGGCCCCAGCACA
TTTGGCCTGGACACTCGGTGGTATGAGCCCCAGCCCCGGCCCCGGCCCAGCCCCCGGCAGGCCC
GGCGTGCCGAGCCCAGTTTACATCAAGTGGTGCTACAGCCCTCCCGGCTCTCACCTCTGACCCA
AAGCCCCCTTAGTTCCCGCACTGGCTCCCCTGAGCTCGCTGCTCGTGCCCGACCTCGACCAGGC
CTCCTGCAGCAGGCAGAGATGTCAGAGATCACCCTGCAGCCGCCAGCCGCGGTCAGCTTCTCTC
GCAAGTCAACACCATCATCCACGGGATCTCCTTCACAGAGCAGCCGCAGTGGGAGCCCCAGCTA
CAGGCCCACAATGGGCTTCACTACTCTGGCCACAGGCTACCCTTCTCCACCACCTGGCCCTGCC
CCTCCGGCGCCAGGGGACAACTTGGATGTGTTTGGACAGACGCCTTCCCCTCGGAGGATGGGGG
AGGAGCCACTCCGGCCAGAGCCCCCAACAACCTTACCTACTTCAGGGAAGCTACAGAGAGACAG
ACAGACAGACAAGCTCCCGAGATCTGCTCGTCTGAGAGAGCACACACTGTACTGTAGCAGCTGG
TATTCCAGCTATCTGGGCAGTGTTGTCGAGACAAGCCTCTCCTCAGCTCAATAGACGGTTCTGC
CTCCCAGGATCAGCAGCTTCCCAACTCTCAGGTTCTGTGGCCCGACGAAGCTGTCTGCCTCAGA
AAGAAG

hide sequence

RefSeq Acc Id:

XM_017595989 ⟹ XP_017451478

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	33,971,802 - 34,017,165 (+)	NCBI
mRatBN7.2	8	25,712,663 - 25,758,035 (+)	NCBI
Rnor_6.0	8	28,352,497 - 28,398,086 (+)	NCBI

Sequence:

show sequence

GGCGGGCCACAGGACAAGCTCAGCTAGGCTTCACCGTGGACCTGGCTGCGCTCTGCCTCCGTTG
GCAGTGCAGGTGCCGCTGCGCCGGGGCCCGGGAGGCTGCGCGCGCCGAGACGAGAGGAGCCAGG
GAGGGATGGAGAGCGGGCCGCCCGGGCTACAGAAGCACCGGCAAGGGGCGTAGGCGGGCGAGAA
GCGGGCATTGAGGCACCAGAAGTGTGCAGACGCAGGAGCACTTTGCGATAGGATGAGGCTCTTG
GCTGGCGCGCGGTAGTACTATGATTTGGTATGTGGCCACTTTGATAGCAAGTGTGATCAGCACC
CGAGGTCTTGTGGCTCAAGTTGCCCACGGCCTGCGAGAGGAACCTGAGTTTGTGACCGCTCGTG
CCGGCGAAGGTGTGGTTCTGCGATGCGACGTCATCCACCCAGTGACAGGACAGCCCCCACCCTA
TGTCGTAGAGTGGTTCAAGTTTGGGGTCCCCATCCCTATCTTCATCAAGTTTGGCTACTATCCC
CCGCATGTGGACCCTGAGTATGCAGGCCGGGCCAGTCTTCATGATAAAGCATCTCTGCGGCTGG
AGCAGGTGCGCTCTGAGGACCAGGGTTGGTACGAGTGCAAAGTGCTCATGCTGGATCAGCAGTA
TGACACATTCCACAACGGCAGCTGGGTCCATCTCACCATTAACGCCCCTCCCACCTTTACAGAA
ACACCCCCCCAGTACATCGAGGCCAAGGAAGGTGGGAGTATTACCATGACTTGCACGGCTTTTG
GGAACCCTAAACCCATCGTCACCTGGCTCAAGGAAGGGACCCTCCTCAGTGCTAGTGGAAAGTA
TCAGGTGAGTGACGGTAGCCTAACGGTGACGTCAGTCAGTCGGGAGGACAGAGGCGCCTATACC
TGTCGAGCATATAGCATCCAGGGTGAGGCTGTGCACACAACCCATCTGCTTGTTCAAGGGCCTC
CCTTCATTGTTTCCCCTCCTGAGAACATCACCGTCAACATCTCCCAGGATGCTCTGCTTACCTG
CAGGGCAGAGGCGTATCCCGGCAACCTCACCTACACCTGGTACTGGCAGGATGAGAACGTCTAC
TTCCAGAATGACCTGAAGCTAAGGGTGCGGATCCTGATTGATGGGACACTGATCATCTTCCGAG
TGAAGCCAGAGGATGCTGGGAAGTATACCTGTGTCCCTAGCAACAGCCTGGGGCGTTCCCCCTC
TGCCTCAGCATACCTGACTGTGCAGTACCCAGCCCGTGTCCTCAACATGCCCCCTGTAATTTAT
GTGCCCGTGGGAATCCATGGCTATATCCGCTGTCCTGTGGATGCAGAGCCGCCTGCTACTGTGG
TGAAGTGGAATAAGGATGGCCGGCCCCTGCAGGTAGAGAAGAACTTGGGTTGGACCTTGATGGA
GGATGGCTCTATTCGAATTGAGGAGGCCACAGAGGAGGCTCTTGGCACTTACACCTGTGTGCCT
TACAACACTTTGGGGACCATGGGCCAGTCTGCCCCTGCCCGGCTCGTCCTGAAGGACCCCCCGT
ATTTCACGGTGCTACCCGGCTGGGAGTACAGGCAGGAGGCTGGCCGGGAGCTGCTCATCCCCTG
TGCAGCTGCAGGGGACCCCTTCCCTGTCATCACCTGGAGGAAGGTAGGGAAGCCCAGCAGAAGC
AAGCACAATGCACTGCCCAGCGGGAGTCTGCAGTTTCGTGCCCTGAGTAAGGAGGACCACGGGG
AGTGGGAATGTGTTGCCACCAACGTGGTCACAAGCATCACTGCCAGCACCCACCTCACTGTCAT
CGGCACCAGTCCCCATGCCCCAGGCAGTGTCCGGGTCCATGTCTCCATGACAACTGCCAACGTG
TCCTGGGAGCCAGGCTATGATGGAGGCTATGAGCAGACATTCTCAGTTTGGTACGGACCTCTGA
TGAAGCGGGCTCAGTTTGGGCCCCACGACTGGCTGTCCTTGTCAGTGCCACTGGGCCCCAGCTG
GCTGCTGGTAGACAGCCTGGAGCCTGAGACTGCATACCAGTTCAGTGTCCTGGCCCAGAACAGG
CTGGGGACCAGCGCCTTCAGTGAGGTGGTCACTGTGAACACTTTAGCATTCCCTGTTACAACTC
CAGAACCCCTGGTGCTGGTGACCCCACCAAGGTGCCTCACAGCCAACCGGACCCAGCAGGGTGT
GCTCCTGTCCTGGCTCCCTCCTGCCAACCACAGCTTCCCCATCGACCGCTACATCATGGAGTTC
CGAGTTGGGGAGCGCTGGGAGATGCTAGATGATGCCATACCAGGCACCGATGGAGAATTTTTTG
CCAAGGATCTGTCACAGGATACCTGGTATGAGTTCCGGGTTTTGGCTGTCATGCAGGATCTGAT
CAGCGAGCCCAGCAACATCGCCGGTGTCTCCAGCACAGACATCTTCCCGCAGCCGGACCTGACT
GATGATGGGCTGGCCCGGCCAGTGTTGGCTGGGATAGTGGCCACCATCTGCTTCCTGGCGGCTG
CCATCCTCTTCAGCACTCTGGCTGCCTGCTTTGTCAACAAGCAGCGCAAACGCAAACTCAAGCG
GAAGAAAGATCCTCCGCTCTCCATCACTCACTGTAGGAAGAGTCTTGAGTCTCCCTTGTCCTCT
GGCAAGGTGAGTCCTGAGAGTATCCGCACACTCCGAGCCCCGTCTGAATCCTCTGACGACCAGG
GCCAGCCAGCAGCCAAGAGGATGCTGAGCCCTACAAGGGAGAAAGAGCTGTCCCTGTACAAAAA
AACCAAGAGGGCTATCAGCAGCAGGAAGTATAGCGTGGCCAAGGCTGAGGCCGAAGCAGAGGCC
ACCACACCCATTGAACTGATCAGTAGAGGCCCGGATGGCCGCTTCGTCATGGGCCCGTCGGAGA
TGGAGCCCTCTGTGAAGGGCCGGCGAATCGAAGGCTTCCCCTTCGCTGAGGAGACGGACATGTA
CCCTGAGTTCCGGCAGTCAGATGAGGAGAATGAAGACCCACTGGTACCCACGTCTGTGGCTGCT
CTGAAGCCTCAACTGACCCCTATGTCTTCCAGCCAGGACTCTTACCTGCCACCACCAGCATACA
GCCCTCGGTTCCAGCCTCGAGGGCTCGAGGGCCCCAGTGGACTGGGAGGACGACTCCAGGCTAC
TGGCCAAGCGAGGCCTCCTGCCCCTCGGCCCTTCCAGCATGGCCAGTATTATGGGTACCTCAGC
AGCAGCAGCCCTGGGGAGGTGGAGCCTCCACCCTTCTATATGCCAGAAGTGGGCAGCCCCTTGA
GCTCAGTCATGTCGTCCCCACCCCTGCACACCGAGGGGCCTTTTGGCCACCCTACCATCCCTGA
GGAAAACGGAGAGAATGCTTCTAACAGCACTTTGCCCTTGACTCAGACACCTACAGGAGGGCGC
TCCCCTGAGCCCTGGGGCCGGCCAGAATTTCCCTTTGGGGGACTGGAGACCCCAGCTATGATGT
TCCCCCACCAGCTGCACCCCTGTGATGTGGCCGAGAGTTTGCAGCCCAAGCCCTGTCTGCCCCG
AGGACTGCCCCCAGCCCCGCTCCAGGTGCCTGCAGCCTATCCAGGCATGCTATCTCTGGAGGCA
CCAAAGGGCTGGGTAGGCAAGTCACCTGGCAGGGGTCCCATCCCGGCGCCCCCTGCCACCAAGT
GGCAGGAAAGACCTATGCAACCTCTGGTCAGCCAAGGGCAGCTAAGACATACCAGCCAAGGTAT
GGGGATACCGGTGTTGCCTTACCCGGAGCCAGCCGAGCCCGGGGGGCACGGTGGCCCCAGCACA
TTTGGCCTGGACACTCGGTGGTATGAGCCCCAGCCCCGGCCCCGGCCCAGCCCCCGGCAGGCCC
GGCGTGCCGAGCCCAGTTTACATCAAGTGGTGCTACAGCCCTCCCGGCTCTCACCTCTGACCCA
AAGCCCCCTTAGTTCCCGCACTGGCTCCCCTGAGCTCGCTGCTCGTGCCCGACCTCGACCAGGC
CTCCTGCAGCAGGCAGAGATGTCAGAGATCACCCTGCAGCCGCCAGCCGCGGTCAGCTTCTCTC
GCAAGTCAACACCATCATCCACGGGATCTCCTTCACAGAGCAGCCGCAGTGGGAGCCCCAGCTA
CAGGCCCACAATGGGCTTCACTACTCTGGCCACAGGCTACCCTTCTCCACCACCTGGCCCTGCC
CCTCCGGCGCCAGGGGACAACTTGGATGTGTTTGGACAGACGCCTTCCCCTCGGAGGATGGGGG
AGGAGCCACTCCGGCCAGAGCCCCCAACAACCTTACCTACTTCAGGCTATCTGGGCAGTGTTGT
CGAGACAAGCCTCTCCTCAGCTCAATAGACGGTTCTGCCTCCCAGGATCAGCAGCTTCCCAACT
CTCAGGTTCTGTGGCCCGACGAAGCTGTCTGCCTCAGAAAGAAG

hide sequence

RefSeq Acc Id:

XM_235959 ⟹ XP_235959

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	33,971,803 - 34,027,390 (+)	NCBI
mRatBN7.2	8	25,712,664 - 25,769,481 (+)	NCBI
Rnor_6.0	8	28,352,498 - 28,398,659 (+)	NCBI
Rnor_5.0	8	28,371,484 - 28,417,964 (+)	NCBI
RGSC_v3.4	8	26,905,723 - 26,941,081 (+)	RGD

Sequence:

show sequence

GCGGGCCACAGGACAAGCTCAGCTAGGCTTCACCGTGGACCTGGCTGCGCTCTGCCTCCGTTGG
CAGTGCAGGTGCCGCTGCGCCGGGGCCCGGGAGGCTGCGCGCGCCGAGACGAGAGGAGCCAGGG
AGGGATGGAGAGCGGGCCGCCCGGGCTACAGAAGCACCGGCAAGGGGCGTAGGCGGGCGAGAAG
CGGGCATTGAGGCACCAGAAGTGTGCAGACGCAGGAGCACTTTGCGATAGGATGAGGCTCTTGG
CTGGCGCGCGGTAGTACTATGATTTGGTATGTGGCCACTTTGATAGCAAGTGTGATCAGCACCC
GAGGTCTTGTGGCTCAAGTTGCCCACGGCCTGCGAGAGGAACCTGAGTTTGTGACCGCTCGTGC
CGGCGAAGGTGTGGTTCTGCGATGCGACGTCATCCACCCAGTGACAGGACAGCCCCCACCCTAT
GTCGTAGAGTGGTTCAAGTTTGGGGTCCCCATCCCTATCTTCATCAAGTTTGGCTACTATCCCC
CGCATGTGGACCCTGAGTATGCAGGCCGGGCCAGTCTTCATGATAAAGCATCTCTGCGGCTGGA
GCAGGTGCGCTCTGAGGACCAGGGTTGGTACGAGTGCAAAGTGCTCATGCTGGATCAGCAGTAT
GACACATTCCACAACGGCAGCTGGGTCCATCTCACCATTAACGCCCCTCCCACCTTTACAGAAA
CACCCCCCCAGTACATCGAGGCCAAGGAAGGTGGGAGTATTACCATGACTTGCACGGCTTTTGG
GAACCCTAAACCCATCGTCACCTGGCTCAAGGAAGGGACCCTCCTCAGTGCTAGTGGAAAGTAT
CAGGTGAGTGACGGTAGCCTAACGGTGACGTCAGTCAGTCGGGAGGACAGAGGCGCCTATACCT
GTCGAGCATATAGCATCCAGGGTGAGGCTGTGCACACAACCCATCTGCTTGTTCAAGGGCCTCC
CTTCATTGTTTCCCCTCCTGAGAACATCACCGTCAACATCTCCCAGGATGCTCTGCTTACCTGC
AGGGCAGAGGCGTATCCCGGCAACCTCACCTACACCTGGTACTGGCAGGATGAGAACGTCTACT
TCCAGAATGACCTGAAGCTAAGGGTGCGGATCCTGATTGATGGGACACTGATCATCTTCCGAGT
GAAGCCAGAGGATGCTGGGAAGTATACCTGTGTCCCTAGCAACAGCCTGGGGCGTTCCCCCTCT
GCCTCAGCATACCTGACTGTGCAGTACCCAGCCCGTGTCCTCAACATGCCCCCTGTAATTTATG
TGCCCGTGGGAATCCATGGCTATATCCGCTGTCCTGTGGATGCAGAGCCGCCTGCTACTGTGGT
GAAGTGGAATAAGGATGGCCGGCCCCTGCAGGTAGAGAAGAACTTGGGTTGGACCTTGATGGAG
GATGGCTCTATTCGAATTGAGGAGGCCACAGAGGAGGCTCTTGGCACTTACACCTGTGTGCCTT
ACAACACTTTGGGGACCATGGGCCAGTCTGCCCCTGCCCGGCTCGTCCTGAAGGACCCCCCGTA
TTTCACGGTGCTACCCGGCTGGGAGTACAGGCAGGAGGCTGGCCGGGAGCTGCTCATCCCCTGT
GCAGCTGCAGGGGACCCCTTCCCTGTCATCACCTGGAGGAAGGTAGGGAAGCCCAGCAGAAGCA
AGCACAATGCACTGCCCAGCGGGAGTCTGCAGTTTCGTGCCCTGAGTAAGGAGGACCACGGGGA
GTGGGAATGTGTTGCCACCAACGTGGTCACAAGCATCACTGCCAGCACCCACCTCACTGTCATC
GGCACCAGTCCCCATGCCCCAGGCAGTGTCCGGGTCCATGTCTCCATGACAACTGCCAACGTGT
CCTGGGAGCCAGGCTATGATGGAGGCTATGAGCAGACATTCTCAGTTTGGATGAAGCGGGCTCA
GTTTGGGCCCCACGACTGGCTGTCCTTGTCAGTGCCACTGGGCCCCAGCTGGCTGCTGGTAGAC
AGCCTGGAGCCTGAGACTGCATACCAGTTCAGTGTCCTGGCCCAGAACAGGCTGGGGACCAGCG
CCTTCAGTGAGGTGGTCACTGTGAACACTTTAGCATTCCCTGTTACAACTCCAGAACCCCTGGT
GCTGGTGACCCCACCAAGGTGCCTCACAGCCAACCGGACCCAGCAGGGTGTGCTCCTGTCCTGG
CTCCCTCCTGCCAACCACAGCTTCCCCATCGACCGCTACATCATGGAGTTCCGAGTTGGGGAGC
GCTGGGAGATGCTAGATGATGCCATACCAGGCACCGATGGAGAATTTTTTGCCAAGGATCTGTC
ACAGGATACCTGGTATGAGTTCCGGGTTTTGGCTGTCATGCAGGATCTGATCAGCGAGCCCAGC
AACATCGCCGGTGTCTCCAGCACAGACATCTTCCCGCAGCCGGACCTGACTGATGATGGGCTGG
CCCGGCCAGTGTTGGCTGGGATAGTGGCCACCATCTGCTTCCTGGCGGCTGCCATCCTCTTCAG
CACTCTGGCTGCCTGCTTTGTCAACAAGCAGCGCAAACGCAAACTCAAGCGGAAGAAAGATCCT
CCGCTCTCCATCACTCACTGTAGGAAGAGTCTTGAGTCTCCCTTGTCCTCTGGCAAGGTGAGTC
CTGAGAGTATCCGCACACTCCGAGCCCCGTCTGAATCCTCTGACGACCAGGGCCAGCCAGCAGC
CAAGAGGATGCTGAGCCCTACAAGGGAGAAAGAGCTGTCCCTGTACAAAAAAACCAAGAGGGCT
ATCAGCAGCAGGAAGTATAGCGTGGCCAAGGCTGAGGCCGAAGCAGAGGCCACCACACCCATTG
AACTGATCAGTAGAGGCCCGGATGGCCGCTTCGTCATGGGCCCGTCGGAGATGGAGCCCTCTGT
GAAGGGCCGGCGAATCGAAGGCTTCCCCTTCGCTGAGGAGACGGACATGTACCCTGAGTTCCGG
CAGTCAGATGAGGAGAATGAAGACCCACTGGTACCCACGTCTGTGGCTGCTCTGAAGCCTCAAC
TGACCCCTATGTCTTCCAGCCAGGACTCTTACCTGCCACCACCAGCATACAGCCCTCGGTTCCA
GCCTCGAGGGCTCGAGGGCCCCAGTGGACTGGGAGGACGACTCCAGGCTACTGGCCAAGCGAGG
CCTCCTGCCCCTCGGCCCTTCCAGCATGGCCAGTATTATGGGTACCTCAGCAGCAGCAGCCCTG
GGGAGGTGGAGCCTCCACCCTTCTATATGCCAGAAGTGGGCAGCCCCTTGAGCTCAGTCATGTC
GTCCCCACCCCTGCACACCGAGGGGCCTTTTGGCCACCCTACCATCCCTGAGGAAAACGGAGAG
AATGCTTCTAACAGCACTTTGCCCTTGACTCAGACACCTACAGGAGGGCGCTCCCCTGAGCCCT
GGGGCCGGCCAGAATTTCCCTTTGGGGGACTGGAGACCCCAGCTATGATGTTCCCCCACCAGCT
GCACCCCTGTGATGTGGCCGAGAGTTTGCAGCCCAAGCCCTGTCTGCCCCGAGGACTGCCCCCA
GCCCCGCTCCAGGTGCCTGCAGCCTATCCAGGCATGCTATCTCTGGAGGCACCAAAGGGCTGGG
TAGGCAAGTCACCTGGCAGGGGTCCCATCCCGGCGCCCCCTGCCACCAAGTGGCAGGAAAGACC
TATGCAACCTCTGGTCAGCCAAGGGCAGCTAAGACATACCAGCCAAGGTATGGGGATACCGGTG
TTGCCTTACCCGGAGCCAGCCGAGCCCGGGGGGCACGGTGGCCCCAGCACATTTGGCCTGGACA
CTCGGTGGTATGAGCCCCAGCCCCGGCCCCGGCCCAGCCCCCGGCAGGCCCGGCGTGCCGAGCC
CAGTTTACATCAAGTGGTGCTACAGCCCTCCCGGCTCTCACCTCTGACCCAAAGCCCCCTTAGT
TCCCGCACTGGCTCCCCTGAGCTCGCTGCTCGTGCCCGACCTCGACCAGGCCTCCTGCAGCAGG
CAGAGATGTCAGAGATCACCCTGCAGCCGCCAGCCGCGGTCAGCTTCTCTCGCAAGTCAACACC
ATCATCCACGGGATCTCCTTCACAGAGCAGCCGCAGTGGGAGCCCCAGCTACAGGCCCACAATG
GGCTTCACTACTCTGGCCACAGGCTACCCTTCTCCACCACCTGGCCCTGCCCCTCCGGCGCCAG
GGGACAACTTGGATGTGTTTGGACAGACGCCTTCCCCTCGGAGGATGGGGGAGGAGCCACTCCG
GCCAGAGCCCCCAACAACCTTACCTACTTCAGGAATACTTCCACCTGCACCCGGGAACGCTGCT
GTGCCTGAGAGGCTGGAGGCTCTGAGATACCAACGGATAAAGAAGCCCAAAAAGTCATCCAAGG
GCTCTTCGAAGTCAAAGAAACGATCCGACGGTTCTGCCTCCCAGGATCAGCAGCTTCCCAACTC
TCAGGTTCTGTGGCCCGACGAAGCTGTCTGCCTCAGAAAGAAGAAGAGACACTCTCGTCCTGAT
CCCTTTGCCCGGCTTTCAGACTTGTGCCACCGTCAGCTTCCAGAAGACCAGACGGCCATCCTCA
ACAGTGTGGATCATGATGACCCAGGCCACGCTACTCTGCTATGACTTGACACCATTCTAAATGT
CCCCAGGGTGGGGTGCTAGGCTAAAGGGGGCAGAGAGGGACCATTGTACAGGGCCTTGTCCTCC
TCTGCCCATCATGGGATGGCTCAGGCCCCTGACCTGTGTGTATTCCCTCATGCCAGTGGGGAAT
ACACCCACTATCTAGCCAGCTAGCCTTGCCCATGGGACAGAGGACTAGGGGAAGAGCTTTTAAC
TGTGGGTCAGAGTTGGGAGTATGTGGGGATAGAAGACATCTGTCTCTATGCCACCTCTCCCACT
TTACTAGATTGGTTCTTCTCACCTCTTCCAACGTCTTAGGAAGTGAGGAAACGGAAAGCAATGG
CTTTTAGTAATGCATTTGTTTCACTTTTCCAAGTCCTGGGAGGGGGTTAGAGTTATATCCGACC
CTCCTAACTCCACATATATATAGATATAGATACAAATGCA

hide sequence

RefSeq Acc Id:

XR_005487809

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	33,971,802 - 34,017,043 (+)	NCBI
mRatBN7.2	8	25,712,663 - 25,757,921 (+)	NCBI

RefSeq Acc Id:

XR_005487810

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	33,971,802 - 34,017,043 (+)	NCBI
mRatBN7.2	8	25,712,663 - 25,757,921 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001363879	(Get FASTA)	NCBI Sequence Viewer
	NP_001423419	(Get FASTA)	NCBI Sequence Viewer
	XP_006242805	(Get FASTA)	NCBI Sequence Viewer
	XP_017451475	(Get FASTA)	NCBI Sequence Viewer
	XP_017451477	(Get FASTA)	NCBI Sequence Viewer
	XP_017451478	(Get FASTA)	NCBI Sequence Viewer
	XP_235959	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	D3ZB51	(Get FASTA)	NCBI Sequence Viewer
	EDL83333	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000012391
	ENSRNOP00000100508
	ENSRNOP00000100692
	ENSRNOP00000101985

RefSeq Acc Id:

XP_235959 ⟸ XM_235959

- Peptide Label:

isoform X1

- Sequence:

show sequence

MIWYVATLIASVISTRGLVAQVAHGLREEPEFVTARAGEGVVLRCDVIHPVTGQPPPYVVEWFK
FGVPIPIFIKFGYYPPHVDPEYAGRASLHDKASLRLEQVRSEDQGWYECKVLMLDQQYDTFHNG
SWVHLTINAPPTFTETPPQYIEAKEGGSITMTCTAFGNPKPIVTWLKEGTLLSASGKYQVSDGS
LTVTSVSREDRGAYTCRAYSIQGEAVHTTHLLVQGPPFIVSPPENITVNISQDALLTCRAEAYP
GNLTYTWYWQDENVYFQNDLKLRVRILIDGTLIIFRVKPEDAGKYTCVPSNSLGRSPSASAYLT
VQYPARVLNMPPVIYVPVGIHGYIRCPVDAEPPATVVKWNKDGRPLQVEKNLGWTLMEDGSIRI
EEATEEALGTYTCVPYNTLGTMGQSAPARLVLKDPPYFTVLPGWEYRQEAGRELLIPCAAAGDP
FPVITWRKVGKPSRSKHNALPSGSLQFRALSKEDHGEWECVATNVVTSITASTHLTVIGTSPHA
PGSVRVHVSMTTANVSWEPGYDGGYEQTFSVWMKRAQFGPHDWLSLSVPLGPSWLLVDSLEPET
AYQFSVLAQNRLGTSAFSEVVTVNTLAFPVTTPEPLVLVTPPRCLTANRTQQGVLLSWLPPANH
SFPIDRYIMEFRVGERWEMLDDAIPGTDGEFFAKDLSQDTWYEFRVLAVMQDLISEPSNIAGVS
STDIFPQPDLTDDGLARPVLAGIVATICFLAAAILFSTLAACFVNKQRKRKLKRKKDPPLSITH
CRKSLESPLSSGKVSPESIRTLRAPSESSDDQGQPAAKRMLSPTREKELSLYKKTKRAISSRKY
SVAKAEAEAEATTPIELISRGPDGRFVMGPSEMEPSVKGRRIEGFPFAEETDMYPEFRQSDEEN
EDPLVPTSVAALKPQLTPMSSSQDSYLPPPAYSPRFQPRGLEGPSGLGGRLQATGQARPPAPRP
FQHGQYYGYLSSSSPGEVEPPPFYMPEVGSPLSSVMSSPPLHTEGPFGHPTIPEENGENASNST
LPLTQTPTGGRSPEPWGRPEFPFGGLETPAMMFPHQLHPCDVAESLQPKPCLPRGLPPAPLQVP
AAYPGMLSLEAPKGWVGKSPGRGPIPAPPATKWQERPMQPLVSQGQLRHTSQGMGIPVLPYPEP
AEPGGHGGPSTFGLDTRWYEPQPRPRPSPRQARRAEPSLHQVVLQPSRLSPLTQSPLSSRTGSP
ELAARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSSTGSPSQSSRSGSPSYRPTMGFTTLA
TGYPSPPPGPAPPAPGDNLDVFGQTPSPRRMGEEPLRPEPPTTLPTSGILPPAPGNAAVPERLE
ALRYQRIKKPKKSSKGSSKSKKRSDGSASQDQQLPNSQVLWPDEAVCLRKKKRHSRPDPFARLS
DLCHRQLPEDQTAILNSVDHDDPGHATLL

hide sequence

RefSeq Acc Id:	XP_006242805 ⟸ XM_006242743
- Peptide Label:	isoform X4
- UniProtKB:	D3ZB51 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MIWYVATLIASVISTRGLVAQVAHGLREEPEFVTARAGEGVVLRCDVIHPVTGQPPPYVVEWFK FGVPIPIFIKFGYYPPHVDPEYAGRASLHDKASLRLEQVRSEDQGWYECKVLMLDQQYDTFHNG SWVHLTINAPPTFTETPPQYIEAKEGGSITMTCTAFGNPKPIVTWLKEGTLLSASGKYQVSDGS LTVTSVSREDRGAYTCRAYSIQGEAVHTTHLLVQGPPFIVSPPENITVNISQDALLTCRAEAYP GNLTYTWYWQDENVYFQNDLKLRVRILIDGTLIIFRVKPEDAGKYTCVPSNSLGRSPSASAYLT VQYPARVLNMPPVIYVPVGIHGYIRCPVDAEPPATVVKWNKDGRPLQVEKNLGWTLMEDGSIRI EEATEEALGTYTCVPYNTLGTMGQSAPARLVLKDPPYFTVLPGWEYRQEAGRELLIPCAAAGDP FPVITWRKVGKPSRSKHNALPSGSLQFRALSKEDHGEWECVATNVVTSITASTHLTVIGTSPHA PGSVRVHVSMTTANVSWEPGYDGGYEQTFSVWYGPLMKRAQFGPHDWLSLSVPLGPSWLLVDSL EPETAYQFSVLAQNRLGTSAFSEVVTVNTLAFPVTTPEPLVLVTPPRCLTANRTQQGVLLSWLP PANHSFPIDRYIMEFRVGERWEMLDDAIPGTDGEFFAKDLSQDTWYEFRVLAVMQDLISEPSNI AGVSSTDIFPQPDLTDDGLARPVLAGIVATICFLAAAILFSTLAACFVNKQRKRKLKRKKDPPL SITHCRKSLESPLSSGKVSPESIRTLRAPSESSDDQGQPAAKRMLSPTREKELSLYKKTKRAIS SRKYSVAKAEAEAEATTPIELISRGPDGRFVMGPSEMEPSVKGRRIEGFPFAEETDMYPEFRQS DEENEDPLVPTSVAALKPQLTPMSSSQDSYLPPPAYSPRFQPRGLEGPSGLGGRLQATGQARPP APRPFQHGQYYGYLSSSSPGEVEPPPFYMPEVGSPLSSVMSSPPLHTEGPFGHPTIPEENGENA SNSTLPLTQTPTGGRSPEPWGRPEFPFGGLETPAMMFPHQLHPCDVAESLQPKPCLPRGLPPAP LQVPAAYPGMLSLEAPKGWVGKSPGRGPIPAPPATKWQERPMQPLVSQGQLRHTSQGMGIPVLP YPEPAEPGGHGGPSTFGLDTRWYEPQPRPRPSPRQARRAEPSLHQVVLQPSRLSPLTQSPLSSR TGSPELAARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSSTGSPSQSSRSGSPSYRPTMGF TTLATGYPSPPPGPAPPAPGDNLDVFGQTPSPRRMGEEPLRPEPPTTLPTSGRFCLPGSAASQL SGSVARRSCLPQKEEETLSS hide sequence

RefSeq Acc Id:	XP_017451477 ⟸ XM_017595988
- Peptide Label:	isoform X3
- UniProtKB:	D3ZB51 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MIWYVATLIASVISTRGLVAQVAHGLREEPEFVTARAGEGVVLRCDVIHPVTGQPPPYVVEWFK FGVPIPIFIKFGYYPPHVDPEYAGRASLHDKASLRLEQVRSEDQGWYECKVLMLDQQYDTFHNG SWVHLTINAPPTFTETPPQYIEAKEGGSITMTCTAFGNPKPIVTWLKEGTLLSASGKYQVSDGS LTVTSVSREDRGAYTCRAYSIQGEAVHTTHLLVQGPPFIVSPPENITVNISQDALLTCRAEAYP GNLTYTWYWQDENVYFQNDLKLRVRILIDGTLIIFRVKPEDAGKYTCVPSNSLGRSPSASAYLT VQYPARVLNMPPVIYVPVGIHGYIRCPVDAEPPATVVKWNKDGRPLQVEKNLGWTLMEDGSIRI EEATEEALGTYTCVPYNTLGTMGQSAPARLVLKDPPYFTVLPGWEYRQEAGRELLIPCAAAGDP FPVITWRKVGKPSRSKHNALPSGSLQFRALSKEDHGEWECVATNVVTSITASTHLTVIGTSPHA PGSVRVHVSMTTANVSWEPGYDGGYEQTFSVWYGPLMKRAQFGPHDWLSLSVPLGPSWLLVDSL EPETAYQFSVLAQNRLGTSAFSEVVTVNTLAFPVTTPEPLVLVTPPRCLTANRTQQGVLLSWLP PANHSFPIDRYIMEFRVGERWEMLDDAIPGTDGEFFAKDLSQDTWYEFRVLAVMQDLISEPSNI AGVSSTDIFPQPDLTDDGLARPVLAGIVATICFLAAAILFSTLAACFVNKQRKRKLKRKKDPPL SITHCRKSLESPLSSGKVSPESIRTLRAPSESSDDQGQPAAKRMLSPTREKELSLYKKTKRAIS SRKYSVAKAEAEAEATTPIELISRGPDGRFVMGPSEMEPSVKGRRIEGFPFAEETDMYPEFRQS DEENEDPLVPTSVAALKPQLTPMSSSQDSYLPPPAYSPRFQPRGLEGPSGLGGRLQATGQARPP APRPFQHGQYYGYLSSSSPGEVEPPPFYMPEVGSPLSSVMSSPPLHTEGPFGHPTIPEENGENA SNSTLPLTQTPTGGRSPEPWGRPEFPFGGLETPAMMFPHQLHPCDVAESLQPKPCLPRGLPPAP LQVPAAYPGMLSLEAPKGWVGKSPGRGPIPAPPATKWQERPMQPLVSQGQLRHTSQGMGIPVLP YPEPAEPGGHGGPSTFGLDTRWYEPQPRPRPSPRQARRAEPSLHQVVLQPSRLSPLTQSPLSSR TGSPELAARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSSTGSPSQSSRSGSPSYRPTMGF TTLATGYPSPPPGPAPPAPGDNLDVFGQTPSPRRMGEEPLRPEPPTTLPTSGKLQRDRQTDKLP RSARLREHTLYCSSWYSSYLGSVVETSLSSAQ hide sequence

RefSeq Acc Id:	XP_017451478 ⟸ XM_017595989
- Peptide Label:	isoform X5
- UniProtKB:	D3ZB51 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MIWYVATLIASVISTRGLVAQVAHGLREEPEFVTARAGEGVVLRCDVIHPVTGQPPPYVVEWFK FGVPIPIFIKFGYYPPHVDPEYAGRASLHDKASLRLEQVRSEDQGWYECKVLMLDQQYDTFHNG SWVHLTINAPPTFTETPPQYIEAKEGGSITMTCTAFGNPKPIVTWLKEGTLLSASGKYQVSDGS LTVTSVSREDRGAYTCRAYSIQGEAVHTTHLLVQGPPFIVSPPENITVNISQDALLTCRAEAYP GNLTYTWYWQDENVYFQNDLKLRVRILIDGTLIIFRVKPEDAGKYTCVPSNSLGRSPSASAYLT VQYPARVLNMPPVIYVPVGIHGYIRCPVDAEPPATVVKWNKDGRPLQVEKNLGWTLMEDGSIRI EEATEEALGTYTCVPYNTLGTMGQSAPARLVLKDPPYFTVLPGWEYRQEAGRELLIPCAAAGDP FPVITWRKVGKPSRSKHNALPSGSLQFRALSKEDHGEWECVATNVVTSITASTHLTVIGTSPHA PGSVRVHVSMTTANVSWEPGYDGGYEQTFSVWYGPLMKRAQFGPHDWLSLSVPLGPSWLLVDSL EPETAYQFSVLAQNRLGTSAFSEVVTVNTLAFPVTTPEPLVLVTPPRCLTANRTQQGVLLSWLP PANHSFPIDRYIMEFRVGERWEMLDDAIPGTDGEFFAKDLSQDTWYEFRVLAVMQDLISEPSNI AGVSSTDIFPQPDLTDDGLARPVLAGIVATICFLAAAILFSTLAACFVNKQRKRKLKRKKDPPL SITHCRKSLESPLSSGKVSPESIRTLRAPSESSDDQGQPAAKRMLSPTREKELSLYKKTKRAIS SRKYSVAKAEAEAEATTPIELISRGPDGRFVMGPSEMEPSVKGRRIEGFPFAEETDMYPEFRQS DEENEDPLVPTSVAALKPQLTPMSSSQDSYLPPPAYSPRFQPRGLEGPSGLGGRLQATGQARPP APRPFQHGQYYGYLSSSSPGEVEPPPFYMPEVGSPLSSVMSSPPLHTEGPFGHPTIPEENGENA SNSTLPLTQTPTGGRSPEPWGRPEFPFGGLETPAMMFPHQLHPCDVAESLQPKPCLPRGLPPAP LQVPAAYPGMLSLEAPKGWVGKSPGRGPIPAPPATKWQERPMQPLVSQGQLRHTSQGMGIPVLP YPEPAEPGGHGGPSTFGLDTRWYEPQPRPRPSPRQARRAEPSLHQVVLQPSRLSPLTQSPLSSR TGSPELAARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSSTGSPSQSSRSGSPSYRPTMGF TTLATGYPSPPPGPAPPAPGDNLDVFGQTPSPRRMGEEPLRPEPPTTLPTSGYLGSVVETSLSS AQ hide sequence

RefSeq Acc Id:	XP_017451475 ⟸ XM_017595986
- Peptide Label:	isoform X2
- UniProtKB:	D3ZB51 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MIWYVATLIASVISTRGLVAQVAHGLREEPEFVTARAGEGVVLRCDVIHPVTGQPPPYVVEWFK FGVPIPIFIKFGYYPPHVDPEYAGRASLHDKASLRLEQVRSEDQGWYECKVLMLDQQYDTFHNG SWVHLTINAPPTFTETPPQYIEAKEGGSITMTCTAFGNPKPIVTWLKEGTLLSASGKYQVSDGS LTVTSVSREDRGAYTCRAYSIQGEAVHTTHLLVQGPPFIVSPPENITVNISQDALLTCRAEAYP GNLTYTWYWQDENVYFQNDLKLRVRILIDGTLIIFRVKPEDAGKYTCVPSNSLGRSPSASAYLT VQYPARVLNMPPVIYVPVGIHGYIRCPVDAEPPATVVKWNKDGRPLQVEKNLGWTLMEDGSIRI EEATEEALGTYTCVPYNTLGTMGQSAPARLVLKDPPYFTVLPGWEYRQEAGRELLIPCAAAGDP FPVITWRKVGKPSRSKHNALPSGSLQFRALSKEDHGEWECVATNVVTSITASTHLTVIGTSPHA PGSVRVHVSMTTANVSWEPGYDGGYEQTFSVWYGPLMKRAQFGPHDWLSLSVPLGPSWLLVDSL EPETAYQFSVLAQNRLGTSAFSEVVTVNTLAFPVTTPEPLVLVTPPRCLTANRTQQGVLLSWLP PANHSFPIDRYIMEFRVGERWEMLDDAIPGTDGEFFAKDLSQDTWYEFRVLAVMQDLISEPSNI AGVSSTDIFPQPDLTDDGLARPVLAGIVATICFLAAAILFSTLAACFVNKQRKRKLKRKKDPPL SITHCRKSLESPLSSGKVSPESIRTLRAPSESSDDQGQPAAKRMLSPTREKELSLYKKTKRAIS SRKYSVAKAEAEAEATTPIELISRGPDGRFVMGPSEMEPSVKGRRIEGFPFAEETDMYPEFRQS DEENEDPLVPTSVAALKPQLTPMSSSQDSYLPPPAYSPRFQPRGLEGPSGLGGRLQATGQARPP APRPFQHGQYYGYLSSSSPGEVEPPPFYMPEVGSPLSSVMSSPPLHTEGPFGHPTIPEENGENA SNSTLPLTQTPTGGRSPEPWGRPEFPFGGLETPAMMFPHQLHPCDVAESLQPKPCLPRGLPPAP LQVPAAYPGMLSLEAPKGWVGKSPGRGPIPAPPATKWQERPMQPLVSQGQLRHTSQGMGIPVLP YPEPAEPGGHGGPSTFGLDTRWYEPQPRPRPSPRQARRAEPSLHQVVLQPSRLSPLTQSPLSSR TGSPELAARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSSTGSPSQSSRSGSPSYRPTMGF TTLATGYPSPPPGPAPPAPGDNLDVFGQTPSPRRMGEEPLRPEPPTTLPTSGKLQRDRQTDKLP RSARLREHTLYCSSWYSRYQSAWTPVCASSVRLHSPFLLAFVPFEVSPSSSFPFPSP hide sequence

Ensembl Acc Id:

ENSRNOP00000012391 ⟸ ENSRNOT00000012391

RefSeq Acc Id:	NP_001363879 ⟸ NM_001376950
- Peptide Label:	precursor
- UniProtKB:	D3ZB51 (UniProtKB/Swiss-Prot), A0A8L2Q5X0 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000101985 ⟸ ENSRNOT00000166754

Ensembl Acc Id:

ENSRNOP00000100508 ⟸ ENSRNOT00000145454

Ensembl Acc Id:

ENSRNOP00000100692 ⟸ ENSRNOT00000152767

Protein Domains

Fibronectin type-III Ig-like

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZB51-F1-model_v2	AlphaFold	D3ZB51	1-1328	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1564717	AgrOrtholog
BioCyc Gene	G2FUF-31302	BioCyc
Ensembl Genes	ENSRNOG00000009253	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000012391	ENTREZGENE
	ENSRNOT00000145454	ENTREZGENE
	ENSRNOT00000152767	ENTREZGENE
	ENSRNOT00000166754	ENTREZGENE
Gene3D-CATH	2.60.40.10	UniProtKB/Swiss-Prot
InterPro	FN3_dom	UniProtKB/Swiss-Prot
	FN3_sf	UniProtKB/Swiss-Prot
	Ig-like_dom	UniProtKB/Swiss-Prot
	Ig-like_dom_sf	UniProtKB/Swiss-Prot
	Ig-like_fold	UniProtKB/Swiss-Prot
	Ig_sub	UniProtKB/Swiss-Prot
	Ig_sub2	UniProtKB/Swiss-Prot
	Neural/epithelial_adhesion	UniProtKB/Swiss-Prot
NCBI Gene	315510	ENTREZGENE
PANTHER	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	UniProtKB/Swiss-Prot
	PROTEIN TURTLE HOMOLOG B	UniProtKB/Swiss-Prot
Pfam	fn3	UniProtKB/Swiss-Prot
	Ig_2	UniProtKB/Swiss-Prot
	Ig_3	UniProtKB/Swiss-Prot
PhenoGen	Igsf9b	PhenoGen
PROSITE	FN3	UniProtKB/Swiss-Prot
	IG_LIKE	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000009253	RatGTEx
SMART	FN3	UniProtKB/Swiss-Prot
	IGc2	UniProtKB/Swiss-Prot
	SM00409	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF48726	UniProtKB/Swiss-Prot
	SSF49265	UniProtKB/Swiss-Prot
UniProt	A0A8L2Q5X0	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0L729_RAT	UniProtKB/TrEMBL
	A0ABK0L9P2_RAT	UniProtKB/TrEMBL
	A0ABK0LEX9_RAT	UniProtKB/TrEMBL
	D3ZB51	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Igsf9b	immunoglobulin superfamily, member 9B	Igsf9b_predicted	immunoglobulin superfamily, member 9B (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Igsf9b_predicted	immunoglobulin superfamily, member 9B (predicted)	RGD1564717_predicted	similar to immunoglobulin superfamily, member 9 (predicted)	Symbol and Name updated	1299863	APPROVED
2006-03-07	RGD1564717_predicted	similar to immunoglobulin superfamily, member 9 (predicted)	LOC315510	similar to immunoglobulin superfamily, member 9	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC315510	similar to immunoglobulin superfamily, member 9			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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