Mix23 (mitochondrial matrix import factor 23) - Rat Genome Database

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Gene: Mix23 (mitochondrial matrix import factor 23) Rattus norvegicus
Analyze
Symbol: Mix23
Name: mitochondrial matrix import factor 23
RGD ID: 1564582
Description: Predicted to be located in mitochondrial intermembrane space. Predicted to be active in mitochondrion. Orthologous to human MIX23 (mitochondrial matrix import factor 23); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Ccdc58; coiled-coil domain containing 58; coiled-coil domain-containing protein 58; hypothetical LOC288065; LOC288065; RGD1564582
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81178,166,038 - 78,186,323 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1178,166,038 - 78,186,323 (-)EnsemblGRCr8
mRatBN7.21164,660,711 - 64,681,000 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1164,660,711 - 64,681,000 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1173,485,696 - 73,505,976 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01166,147,958 - 66,168,238 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01165,179,206 - 65,199,486 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01167,598,419 - 67,618,704 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1167,598,419 - 67,618,704 (-)Ensemblrn6Rnor6.0
Rnor_5.01170,685,891 - 70,706,181 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41166,497,108 - 66,518,067 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1164,128,930 - 64,149,211 (-)NCBICelera
Cytogenetic Map11q22NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2,6-dinitrotoluene  (EXP)
2-methylcholine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
aflatoxin B1  (EXP,ISO)
aflatoxin M1  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
beta-lapachone  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
cannabidiol  (ISO)
chloroprene  (EXP)
cisplatin  (ISO)
cobalt dichloride  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
cordycepin  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
dexamethasone  (ISO)
dicrotophos  (ISO)
disulfiram  (ISO)
finasteride  (EXP)
flutamide  (EXP)
folic acid  (ISO)
formaldehyde  (ISO)
gentamycin  (EXP)
hexadecanoic acid  (ISO)
indometacin  (ISO)
isoprenaline  (ISO)
ivermectin  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
methidathion  (ISO)
nefazodone  (EXP)
nickel dichloride  (EXP)
nimesulide  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP)
perfluorononanoic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
pirinixic acid  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
succimer  (ISO)
temozolomide  (ISO)
titanium dioxide  (ISO)
triphenyl phosphate  (ISO)
triptonide  (ISO)
trovafloxacin  (ISO)
tungsten  (ISO)
urethane  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:18614015   PMID:34800366  


Genomics

Comparative Map Data
Mix23
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81178,166,038 - 78,186,323 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1178,166,038 - 78,186,323 (-)EnsemblGRCr8
mRatBN7.21164,660,711 - 64,681,000 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1164,660,711 - 64,681,000 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1173,485,696 - 73,505,976 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01166,147,958 - 66,168,238 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01165,179,206 - 65,199,486 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01167,598,419 - 67,618,704 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1167,598,419 - 67,618,704 (-)Ensemblrn6Rnor6.0
Rnor_5.01170,685,891 - 70,706,181 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41166,497,108 - 66,518,067 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1164,128,930 - 64,149,211 (-)NCBICelera
Cytogenetic Map11q22NCBI
MIX23
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383122,359,591 - 122,383,231 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3122,359,587 - 122,383,239 (-)Ensemblhg38GRCh38
GRCh373122,078,438 - 122,102,078 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363123,561,126 - 123,584,764 (-)NCBIBuild 36Build 36hg18NCBI36
Celera3120,488,064 - 120,511,702 (-)NCBICelera
Cytogenetic Map3q21.1NCBI
HuRef3119,451,754 - 119,475,393 (-)NCBIHuRef
CHM1_13122,041,957 - 122,065,559 (-)NCBICHM1_1
T2T-CHM13v2.03125,079,165 - 125,102,783 (-)NCBIT2T-CHM13v2.0
Mix23
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391635,892,030 - 35,912,488 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1635,892,055 - 35,912,490 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381636,071,660 - 36,092,118 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1636,071,685 - 36,092,120 (+)Ensemblmm10GRCm38
MGSCv371636,071,746 - 36,092,204 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361635,991,432 - 36,011,413 (+)NCBIMGSCv36mm8
Celera1636,554,962 - 36,575,941 (+)NCBICelera
Cytogenetic Map16B3NCBI
cM Map1625.43NCBI
Mix23
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542721,639,392 - 21,667,696 (-)Ensembl
ChiLan1.0NW_00495542721,639,392 - 21,667,642 (-)NCBIChiLan1.0ChiLan1.0
MIX23
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22120,305,092 - 120,328,814 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13120,309,680 - 120,333,594 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03119,447,990 - 119,473,899 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13126,356,033 - 126,379,627 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3126,356,033 - 126,379,627 (-)EnsemblpanPan2panpan1.1
MIX23
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13325,498,248 - 25,524,037 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3325,500,540 - 25,524,063 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3325,525,298 - 25,548,627 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03325,736,219 - 25,759,558 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3325,736,236 - 25,759,543 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13325,533,461 - 25,556,620 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03325,576,226 - 25,599,542 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03326,134,152 - 26,157,820 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Mix23
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602128,825,203 - 128,850,758 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365368,671,172 - 8,696,886 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365368,671,244 - 8,696,754 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MIX23
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13138,152,491 - 138,178,444 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.113138,152,426 - 138,178,458 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213147,763,368 - 147,842,723 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MIX23
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12258,477,053 - 58,501,342 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2258,489,161 - 58,502,366 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666041107,841,280 - 107,865,562 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mix23
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624912694,859 - 727,275 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624912696,488 - 739,862 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Mix23
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1420,842,277 - 20,861,622 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Mix23
91 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:167
Count of miRNA genes:114
Interacting mature miRNAs:126
Transcripts:ENSRNOT00000042208
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70208Niddm22Non-insulin dependent diabetes mellitus QTL 223.61blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)117330848796070872Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)114644316891443168Rat
1598811Bp291Blood pressure QTL 2911.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113330600878306008Rat
4889859Pur28Proteinuria QTL 2819.50.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)115892833699753367Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113294306789836615Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)113642841681428416Rat
10058954Gmadr7Adrenal mass QTL 72.490.0049adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)117385089499753367Rat
2298551Neuinf10Neuroinflammation QTL 103.7nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)115893182292356038Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)113461876079618760Rat
2312566Glom20Glomerulus QTL 203.60.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)115775483796071021Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112019354996351019Rat
724561Plsm4Polydactyly-luxate syndrome (PLS) morphotypes QTL 40.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)116796218499753367Rat
631506Bp104Blood pressure QTL 1042.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)117330831599753367Rat
1581572Uae35Urinary albumin excretion QTL 350.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)115827236396350770Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
1300110Stl7Serum triglyceride level QTL 74.64blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)115107102196071021Rat
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)112252474682951192Rat
1598841Memor7Memory QTL 7exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)113330600878306008Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)115827236396350770Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
1300135Rf19Renal function QTL 193.38blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)115441539196071021Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)113674945981749459Rat
4889521Gluco62Glucose level QTL 622.820.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)116859932196497754Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)113674945981749459Rat
7411658Foco27Food consumption QTL 2716.20.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)116985594399753367Rat

Markers in Region
RH139177  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81178,185,475 - 78,186,000 (+)Marker Load Pipeline
mRatBN7.21164,680,152 - 64,680,677 (+)MAPPERmRatBN7.2
Rnor_6.01167,617,857 - 67,618,381NCBIRnor6.0
Rnor_5.01170,705,334 - 70,705,858UniSTSRnor5.0
RGSC_v3.41166,517,220 - 66,517,744UniSTSRGSC3.4
Celera1164,148,364 - 64,148,888UniSTS
RH 3.4 Map11485.4UniSTS
Cytogenetic Map11q22UniSTS
RH130063  
Rat AssemblyChrPosition (strand)SourceJBrowse
RH 3.4 Map14579.6UniSTS
Cytogenetic Map11q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 91 59 6 355 191 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000042208   ⟹   ENSRNOP00000047028
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1178,166,038 - 78,186,323 (-)Ensembl
mRatBN7.2 Ensembl1164,660,711 - 64,681,000 (-)Ensembl
Rnor_6.0 Ensembl1167,598,419 - 67,618,704 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000095212   ⟹   ENSRNOP00000082309
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1178,166,038 - 78,185,820 (-)Ensembl
mRatBN7.2 Ensembl1164,660,711 - 64,679,074 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000114839   ⟹   ENSRNOP00000089537
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1178,166,038 - 78,185,782 (-)Ensembl
mRatBN7.2 Ensembl1164,660,711 - 64,680,459 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000130380   ⟹   ENSRNOP00000105535
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1178,166,038 - 78,185,981 (-)Ensembl
RefSeq Acc Id: NM_001105875   ⟹   NP_001099345
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81178,166,038 - 78,186,323 (-)NCBI
mRatBN7.21164,660,711 - 64,681,000 (-)NCBI
Rnor_6.01167,598,419 - 67,618,704 (-)NCBI
Rnor_5.01170,685,891 - 70,706,181 (-)NCBI
RGSC_v3.41166,497,108 - 66,518,067 (-)RGD
Celera1164,128,930 - 64,149,211 (-)RGD
Sequence:
RefSeq Acc Id: XM_063270378   ⟹   XP_063126448
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81178,166,045 - 78,183,126 (-)NCBI
RefSeq Acc Id: NP_001099345   ⟸   NM_001105875
- UniProtKB: D4A305 (UniProtKB/TrEMBL),   A6IRD9 (UniProtKB/TrEMBL),   A6IRE0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000047028   ⟸   ENSRNOT00000042208
Ensembl Acc Id: ENSRNOP00000082309   ⟸   ENSRNOT00000095212
Ensembl Acc Id: ENSRNOP00000089537   ⟸   ENSRNOT00000114839
RefSeq Acc Id: XP_063126448   ⟸   XM_063270378
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZWL7 (UniProtKB/TrEMBL),   A6IRE0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000105535   ⟸   ENSRNOT00000130380

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A305-F1-model_v2 AlphaFold D4A305 1-144 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698184
Promoter ID:EPDNEW_R8709
Type:single initiation site
Name:Ccdc58_1
Description:coiled-coil domain containing 58
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01167,618,170 - 67,618,230EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1564582 AgrOrtholog
BioCyc Gene G2FUF-21212 BioCyc
Ensembl Genes ENSRNOG00000031653 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000042208 ENTREZGENE
  ENSRNOT00000042208.5 UniProtKB/TrEMBL
  ENSRNOT00000095212 ENTREZGENE
  ENSRNOT00000095212.2 UniProtKB/TrEMBL
  ENSRNOT00000114839.2 UniProtKB/TrEMBL
  ENSRNOT00000130380.1 UniProtKB/TrEMBL
InterPro Caffeine_induced_death_Cid2 UniProtKB/TrEMBL
KEGG Report rno:288065 UniProtKB/TrEMBL
NCBI Gene 288065 ENTREZGENE
PANTHER PROTEIN MIX23 UniProtKB/TrEMBL
  PTHR31905 UniProtKB/TrEMBL
Pfam Cid2 UniProtKB/TrEMBL
PhenoGen Mix23 PhenoGen
RatGTEx ENSRNOG00000031653 RatGTEx
UniProt A0A8I5ZWL7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A8F4_RAT UniProtKB/TrEMBL
  A0ABK0LIJ5_RAT UniProtKB/TrEMBL
  A6IRD9 ENTREZGENE, UniProtKB/TrEMBL
  A6IRE0 ENTREZGENE, UniProtKB/TrEMBL
  D4A305 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-11-12 Mix23  mitochondrial matrix import factor 23  Ccdc58  coiled-coil domain containing 58  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Ccdc58  coiled-coil domain containing 58   Ccdc58_predicted  coiled-coil domain containing 58 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Ccdc58_predicted  coiled-coil domain containing 58 (predicted)  RGD1564582_predicted  RGD1564582 (predicted)  Symbol and Name updated 1299863 APPROVED
2006-03-07 RGD1564582_predicted  RGD1564582 (predicted)  LOC288065  hypothetical LOC288065  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC288065  hypothetical LOC288065      Symbol and Name status set to provisional 70820 PROVISIONAL