Hmgb3 (high mobility group box 3) - Rat Genome Database

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Gene: Hmgb3 (high mobility group box 3) Rattus norvegicus
Analyze
Symbol: Hmgb3 (Ensembl: Hmgb3l1)
Name: high mobility group box 3 (Ensembl:high mobility group box 3 like 1)
RGD ID: 1564407
Description: Predicted to enable DNA binding activity and RNA binding activity. Predicted to be involved in innate immune response. Predicted to act upstream of or within negative regulation of B cell differentiation and negative regulation of myeloid cell differentiation. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in syndromic microphthalmia 13. Orthologous to human HMGB3 (high mobility group box 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; alpha-Zearalanol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: high mobility group protein B3; LOC305373; LOC688583; RGD1564407; similar to High mobility group protein 4 (HMG-4) (High mobility group protein 2a) (HMG-2a); similar to high mobility group protein homolog HMG4
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X154,341,106 - 154,346,087 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 EnsemblX154,340,935 - 154,346,097 (+)EnsemblGRCr8
mRatBN7.2X149,296,303 - 149,301,290 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX149,296,375 - 149,301,292 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_UtxX151,490,519 - 151,495,501 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X155,024,716 - 155,029,697 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X152,566,272 - 152,571,254 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01736,690,190 - 36,694,329 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1736,690,249 - 36,694,325 (+)Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl1451,458,443 - 51,462,721 (-)Ensemblrn6Rnor6.0
Rnor_5.01451,617,771 - 51,622,052 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4X157,027,845 - 157,033,080 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1448,405,656 - 48,406,577 (-)NCBICelera
Cytogenetic MapXq37NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,4'-trichlorobiphenyl  (ISO)
2-methylcholine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
acrolein  (ISO)
acrylamide  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
alpha-Zearalanol  (EXP)
aristolochic acid A  (ISO)
Aroclor 1254  (ISO)
arsenite(3-)  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
butanal  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
chlorpyrifos  (EXP)
cisplatin  (ISO)
cobalt dichloride  (EXP,ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
DDE  (ISO)
dextran sulfate  (ISO)
dibenz[a,h]anthracene  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
dicrotophos  (ISO)
diquat  (ISO)
endosulfan  (EXP)
entinostat  (ISO)
enzyme inhibitor  (ISO)
Evodiamine  (ISO)
finasteride  (EXP)
folic acid  (ISO)
gentamycin  (EXP)
geraniol  (ISO)
isobutanol  (ISO)
ivermectin  (ISO)
leflunomide  (ISO)
menadione  (ISO)
N-methyl-N-nitrosourea  (ISO)
N-nitrosodiethylamine  (ISO)
okadaic acid  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (EXP)
PCB138  (ISO)
pentachlorophenol  (ISO)
pentanal  (ISO)
perfluorooctanoic acid  (EXP)
pirinixic acid  (ISO)
potassium chromate  (ISO)
propanal  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
Soman  (EXP)
sulindac  (EXP)
sunitinib  (ISO)
tetrachloromethane  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
trichloroethene  (EXP)
trimellitic anhydride  (ISO)
triphenyl phosphate  (ISO)
triptonide  (ISO)
trovafloxacin  (ISO)
tungsten  (ISO)
tunicamycin  (ISO)
valproic acid  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
chromosome  (IEA)
nucleolus  (ISO)
nucleoplasm  (ISO)
nucleus  (IEA,ISO)

Molecular Function
DNA binding  (IEA,ISO)
protein binding  (ISO)
RNA binding  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:12714519   PMID:19890330   PMID:22681889   PMID:30166860   PMID:32587254  


Genomics

Comparative Map Data
Hmgb3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X154,341,106 - 154,346,087 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 EnsemblX154,340,935 - 154,346,097 (+)EnsemblGRCr8
mRatBN7.2X149,296,303 - 149,301,290 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX149,296,375 - 149,301,292 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_UtxX151,490,519 - 151,495,501 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X155,024,716 - 155,029,697 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X152,566,272 - 152,571,254 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01736,690,190 - 36,694,329 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1736,690,249 - 36,694,325 (+)Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl1451,458,443 - 51,462,721 (-)Ensemblrn6Rnor6.0
Rnor_5.01451,617,771 - 51,622,052 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4X157,027,845 - 157,033,080 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1448,405,656 - 48,406,577 (-)NCBICelera
Cytogenetic MapXq37NCBI
HMGB3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X150,980,507 - 150,990,771 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX150,980,509 - 150,990,775 (+)Ensemblhg38GRCh38
GRCh37X150,148,980 - 150,159,244 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X149,902,421 - 149,909,906 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34X149,822,336 - 149,827,902NCBI
CeleraX150,399,636 - 150,407,102 (+)NCBICelera
Cytogenetic MapXq28NCBI
HuRefX139,013,654 - 139,018,732 (+)NCBIHuRef
CHM1_1X150,026,145 - 150,033,552 (+)NCBICHM1_1
T2T-CHM13v2.0X149,248,003 - 149,258,240 (+)NCBIT2T-CHM13v2.0
Hmgb3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X70,599,523 - 70,604,261 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX70,599,524 - 70,604,282 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38X71,555,917 - 71,560,673 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX71,555,918 - 71,560,676 (+)Ensemblmm10GRCm38
MGSCv37X68,809,168 - 68,813,829 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36X67,816,549 - 67,821,210 (+)NCBIMGSCv36mm8
CeleraX62,536,255 - 62,540,916 (+)NCBICelera
Cytogenetic MapXA7.3NCBI
cM MapX36.92NCBI
Hmgb3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554986,633,336 - 6,640,459 (+)Ensembl
ChiLan1.0NW_0049554986,633,540 - 6,640,393 (+)NCBIChiLan1.0ChiLan1.0
HMGB3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X151,119,492 - 151,127,518 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X151,123,503 - 151,131,123 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X140,632,163 - 140,639,774 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X150,565,153 - 150,570,752 (+)NCBIPanPan1.1PanPan1.1panPan2
HMGB3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X119,152,166 - 119,159,803 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX119,155,786 - 119,159,814 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_TashaX104,533,386 - 104,542,947 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0X121,372,243 - 121,381,804 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX121,371,809 - 121,379,334 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X118,098,022 - 118,107,582 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X120,575,897 - 120,585,346 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X120,458,422 - 120,467,983 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Hmgb3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X116,726,610 - 116,736,044 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367141,522,170 - 1,527,191 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049367141,523,016 - 1,527,301 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HMGB3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX122,592,936 - 122,599,493 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1X122,591,413 - 122,599,496 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X140,189,835 - 140,193,015 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HMGB3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X125,568,622 - 125,572,184 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606563,317,615 - 63,325,146 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hmgb3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046249231,245,898 - 1,250,571 (+)NCBIHetGla 1.0HetGla 1.0hetGla2

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:88
Count of miRNA genes:83
Interacting mature miRNAs:85
Transcripts:ENSRNOT00000015044
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX105359969157758123Rat
10059603Bw174Body weight QTL 1743.40.025body mass (VT:0001259)body weight (CMO:0000012)X118973754157758123Rat

Markers in Region
UniSTS:256978  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01737,997,594 - 37,997,937NCBIRnor5.0
Rnor_5.01451,618,739 - 51,619,082NCBIRnor5.0
Rnor_5.01451,331,169 - 51,331,360NCBIRnor5.0
RGSC_v3.4X157,031,769 - 157,032,111UniSTSRGSC3.4
RGSC_v3.4413,292,046 - 13,292,236UniSTSRGSC3.4
Celera1448,406,068 - 48,406,258UniSTS
Cytogenetic Map4q11UniSTS
Cytogenetic MapXq37UniSTS
Hmgb3  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01737,997,594 - 37,997,937NCBIRnor5.0
Rnor_5.01451,618,739 - 51,619,082NCBIRnor5.0
Rnor_5.01451,331,169 - 51,331,360NCBIRnor5.0
RGSC_v3.4X157,031,769 - 157,032,111UniSTSRGSC3.4
RGSC_v3.4413,292,046 - 13,292,236UniSTSRGSC3.4
Celera1448,406,068 - 48,406,258UniSTS
Cytogenetic Map4q11UniSTS
Cytogenetic MapXq37UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
24 4 86 252 138 134 88 109 88 12 456 237 11 221 106 136 46 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000015044   ⟹   ENSRNOP00000015044
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblX154,341,246 - 154,346,097 (+)Ensembl
mRatBN7.2 EnsemblX149,296,375 - 149,301,290 (+)Ensembl
Rnor_6.0 Ensembl1451,458,443 - 51,462,721 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000074314   ⟹   ENSRNOP00000066102
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX149,297,441 - 149,301,292 (+)Ensembl
Rnor_6.0 Ensembl1736,691,875 - 36,693,476 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000082140   ⟹   ENSRNOP00000069465
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblX154,340,935 - 154,346,087 (+)Ensembl
mRatBN7.2 EnsemblX149,297,395 - 149,301,292 (+)Ensembl
Rnor_6.0 Ensembl1736,690,249 - 36,694,325 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000089476   ⟹   ENSRNOP00000070959
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1736,690,249 - 36,693,499 (+)Ensembl
RefSeq Acc Id: NM_001173341   ⟹   NP_001166812
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X154,341,106 - 154,346,087 (+)NCBI
mRatBN7.2X149,296,303 - 149,301,290 (+)NCBI
Rnor_6.01736,690,190 - 36,694,325 (+)NCBI
Rnor_5.01451,617,771 - 51,622,052 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001398776   ⟹   NP_001385705
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X154,341,171 - 154,346,087 (+)NCBI
mRatBN7.2X149,296,368 - 149,301,290 (+)NCBI
RefSeq Acc Id: NM_001398777   ⟹   NP_001385706
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X154,342,198 - 154,346,087 (+)NCBI
mRatBN7.2X149,297,395 - 149,301,290 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001166812 (Get FASTA)   NCBI Sequence Viewer  
  NP_001385705 (Get FASTA)   NCBI Sequence Viewer  
  NP_001385706 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI58740 (Get FASTA)   NCBI Sequence Viewer  
  EDL82825 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000015044
  ENSRNOP00000015044.7
  ENSRNOP00000069465.3
RefSeq Acc Id: NP_001166812   ⟸   NM_001173341
- Peptide Label: isoform 1
- UniProtKB: B0BN99 (UniProtKB/TrEMBL),   M0R9D4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000069465   ⟸   ENSRNOT00000082140
Ensembl Acc Id: ENSRNOP00000070959   ⟸   ENSRNOT00000089476
Ensembl Acc Id: ENSRNOP00000066102   ⟸   ENSRNOT00000074314
Ensembl Acc Id: ENSRNOP00000015044   ⟸   ENSRNOT00000015044
RefSeq Acc Id: NP_001385705   ⟸   NM_001398776
- Peptide Label: isoform 2
- UniProtKB: F7EWK1 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001385706   ⟸   NM_001398777
- Peptide Label: isoform 3
- UniProtKB: M0R9D4 (UniProtKB/TrEMBL),   A0A0G2JVF5 (UniProtKB/TrEMBL)
Protein Domains
HMG box

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B0BN99-F1-model_v2 AlphaFold B0BN99 1-200 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700435
Promoter ID:EPDNEW_R10957
Type:initiation region
Name:Hmgb3_1
Description:high mobility group box 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01736,690,181 - 36,690,241EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1564407 AgrOrtholog
BioCyc Gene G2FUF-724 BioCyc
Ensembl Genes ENSRNOG00000011096 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00000050910 Ensembl
Ensembl Transcript ENSRNOT00000015044 ENTREZGENE
  ENSRNOT00000015044.8 UniProtKB/TrEMBL
  ENSRNOT00000082140.3 UniProtKB/TrEMBL
Gene3D-CATH 1.10.30.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:9099241 IMAGE-MGC_LOAD
InterPro HMG_box_dom_sf UniProtKB/TrEMBL
  HMG_boxA_CS UniProtKB/TrEMBL
  HMG_superfamily UniProtKB/TrEMBL
  HMGB UniProtKB/TrEMBL
KEGG Report rno:305373 UniProtKB/TrEMBL
MGC_CLONE MGC:187907 IMAGE-MGC_LOAD
NCBI Gene 305373 ENTREZGENE
PANTHER HIGH MOBILITY GROUP PROTEIN B3 UniProtKB/TrEMBL
  HIGH MOBILITY GROUP PROTEIN DSP1 UniProtKB/TrEMBL
Pfam DUF1898 UniProtKB/TrEMBL
  HMG_box UniProtKB/TrEMBL
PhenoGen Hmgb3 PhenoGen
PRINTS HIGHMOBLTY12 UniProtKB/TrEMBL
PROSITE HMG_BOX_1 UniProtKB/TrEMBL
  HMG_BOX_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000011096 RatGTEx
  ENSRNOG00000050910 RatGTEx
SMART HMG UniProtKB/TrEMBL
Superfamily-SCOP HMG-box UniProtKB/TrEMBL
UniProt A0A0G2JVF5 ENTREZGENE, UniProtKB/TrEMBL
  B0BN99 ENTREZGENE, UniProtKB/TrEMBL
  F7EWK1 ENTREZGENE, UniProtKB/TrEMBL
  M0R9D4 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Hmgb3  high mobility group box 3  LOC688583  similar to High mobility group protein 4 (HMG-4) (High mobility group protein 2a) (HMG-2a)  Data merged from RGD:1587596 737654 PROVISIONAL
2008-03-06 Hmgb3  high mobility group box 3  RGD1564407_predicted  similar to high mobility group protein homolog HMG4 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-19 LOC688583  similar to High mobility group protein 4 (HMG-4) (High mobility group protein 2a) (HMG-2a)      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-03-07 RGD1564407_predicted  similar to high mobility group protein homolog HMG4 (predicted)  LOC305373  similar to high mobility group protein homolog HMG4  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC305373  similar to high mobility group protein homolog HMG4      Symbol and Name status set to provisional 70820 PROVISIONAL