Ttc33 (tetratricopeptide repeat domain 33) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Ttc33 (tetratricopeptide repeat domain 33) Rattus norvegicus
Analyze
Symbol: Ttc33
Name: tetratricopeptide repeat domain 33
RGD ID: 1564042
Description: Orthologous to human TTC33 (tetratricopeptide repeat domain 33); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC294774; RGD1564042; similar to osmosis responsive factor; tetratricopeptide repeat protein 33
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8256,007,377 - 56,054,312 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl256,007,316 - 56,054,326 (+)EnsemblGRCr8
mRatBN7.2254,279,906 - 54,326,851 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl254,279,997 - 54,323,871 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx261,386,644 - 61,428,964 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0259,445,324 - 59,487,639 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0254,455,950 - 54,498,071 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0254,897,320 - 54,944,241 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl254,897,424 - 54,939,514 (+)Ensemblrn6Rnor6.0
Rnor_5.0273,921,771 - 73,967,083 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4254,367,846 - 54,409,972 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera249,927,867 - 49,969,974 (+)NCBICelera
Cytogenetic Map2q16NCBI
JBrowse:




References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Ttc33
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8256,007,377 - 56,054,312 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl256,007,316 - 56,054,326 (+)EnsemblGRCr8
mRatBN7.2254,279,906 - 54,326,851 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl254,279,997 - 54,323,871 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx261,386,644 - 61,428,964 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0259,445,324 - 59,487,639 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0254,455,950 - 54,498,071 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0254,897,320 - 54,944,241 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl254,897,424 - 54,939,514 (+)Ensemblrn6Rnor6.0
Rnor_5.0273,921,771 - 73,967,083 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4254,367,846 - 54,409,972 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera249,927,867 - 49,969,974 (+)NCBICelera
Cytogenetic Map2q16NCBI
TTC33
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38540,711,576 - 40,755,961 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl540,512,333 - 40,755,963 (-)Ensemblhg38GRCh38
GRCh37540,711,678 - 40,756,063 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36540,747,435 - 40,791,829 (-)NCBIBuild 36Build 36hg18NCBI36
Celera540,600,249 - 40,644,657 (-)NCBICelera
Cytogenetic Map5p13.1NCBI
HuRef540,663,704 - 40,707,894 (-)NCBIHuRef
CHM1_1540,713,552 - 40,757,967 (-)NCBICHM1_1
T2T-CHM13v2.0540,967,941 - 41,012,360 (-)NCBIT2T-CHM13v2.0
Ttc33
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39155,214,971 - 5,247,817 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl155,215,006 - 5,247,817 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38155,185,490 - 5,218,336 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl155,185,525 - 5,218,336 (+)Ensemblmm10GRCm38
MGSCv37155,135,560 - 5,168,336 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36155,132,775 - 5,165,551 (+)NCBIMGSCv36mm8
Celera155,035,095 - 5,067,874 (+)NCBICelera
Cytogenetic Map15A1NCBI
cM Map151.99NCBI
Ttc33
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542625,017,351 - 25,075,039 (-)Ensembl
ChiLan1.0NW_00495542625,017,351 - 25,075,164 (-)NCBIChiLan1.0ChiLan1.0
TTC33
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2469,578,211 - 69,625,486 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1567,732,829 - 67,779,117 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0569,623,962 - 69,665,450 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1574,669,939 - 74,713,898 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl574,669,939 - 74,820,697 (+)EnsemblpanPan2panpan1.1
TTC33
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1468,617,895 - 68,653,104 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl468,617,594 - 68,648,929 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha468,294,841 - 68,329,833 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0469,124,959 - 69,159,953 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl469,125,220 - 69,159,910 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1468,884,203 - 68,919,180 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0468,997,291 - 69,032,287 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0469,536,372 - 69,571,370 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ttc33
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213229,472,118 - 229,524,282 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365181,847,544 - 1,899,888 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365181,847,567 - 1,896,712 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TTC33
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1625,674,665 - 25,741,919 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11625,695,932 - 25,741,962 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
TTC33
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1439,469,874 - 39,509,570 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607129,891,667 - 29,935,967 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ttc33
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475914,178,411 - 14,236,007 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462475914,178,314 - 14,241,933 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Ttc33
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v13175,101,603 - 175,139,413 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Ttc33
130 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:91
Count of miRNA genes:76
Interacting mature miRNAs:86
Transcripts:ENSRNOT00000017665
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21332504158325041Rat
7387318Stl32Serum triglyceride level QTL 323.20.0003blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)22411781369117813Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23675034481750344Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)244537979205135428Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)220695736231474293Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328206613235Rat
1579916Bp270Blood pressure QTL 2700.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)21605188361051883Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22203804467038044Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328206613235Rat
152025242Bw191Body weight QTL 1913.62body mass (VT:0001259)240306867124537199Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)227148328145807373Rat
9590095Sffal3Serum free fatty acids level QTL 36.780.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)22888999173889991Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)241801363104744824Rat
1331764Bp205Blood pressure QTL 2053.476arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)21436870759368707Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328159440891Rat
631208Bw1Body weight QTL15.09mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)24490435585286097Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)24265106205135428Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)227148557159440760Rat
1300155Bp174Blood pressure QTL 1744.09arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)244537979112567334Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)244537979159440891Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)27605533104774005Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)247856345205135428Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328159440891Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22865266683465677Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)25126685996266859Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)244537979184731399Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)227148557159440760Rat
2306903Bp336Blood pressure QTL 3360.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)238426449111295694Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)244537979205135428Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)228652666139067443Rat
152025206Hrtrt23Heart rate QTL 235.98heart pumping trait (VT:2000009)230219200171802126Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
731184Mamtr4Mammary tumor resistance QTL 40.0003mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)21822713763227137Rat
152025204Hrtrt22Heart rate QTL 225.6heart pumping trait (VT:2000009)230219200171802126Rat
61371Edpm1Estrogen-dependent pituitary mass QTL 140.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)23686864381868643Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)24490435589904355Rat
1582246Cm60Cardiac mass QTL 605.8heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)23326999678269996Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22865266673652666Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000017665   ⟹   ENSRNOP00000017666
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl254,279,997 - 54,322,122 (+)Ensembl
Rnor_6.0 Ensembl254,897,424 - 54,939,514 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000101659   ⟹   ENSRNOP00000092725
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl254,282,227 - 54,322,122 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000101780   ⟹   ENSRNOP00000097937
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl256,007,617 - 56,054,326 (+)Ensembl
mRatBN7.2 Ensembl254,280,143 - 54,323,871 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000162683   ⟹   ENSRNOP00000100652
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl256,007,316 - 56,054,326 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000171751   ⟹   ENSRNOP00000104667
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl256,009,986 - 56,054,326 (+)Ensembl
RefSeq Acc Id: NM_001106414   ⟹   NP_001099884
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8256,007,470 - 56,049,588 (+)NCBI
mRatBN7.2254,279,999 - 54,322,122 (+)NCBI
Rnor_6.0254,897,424 - 54,939,514 (+)NCBI
Rnor_5.0273,921,771 - 73,967,083 (+)NCBI
RGSC_v3.4254,367,846 - 54,409,972 (+)RGD
Celera249,927,867 - 49,969,974 (+)RGD
Sequence:
RefSeq Acc Id: XM_006231993   ⟹   XP_006232055
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8256,007,481 - 56,054,312 (+)NCBI
mRatBN7.2254,280,074 - 54,326,851 (+)NCBI
Rnor_6.0254,897,441 - 54,944,241 (+)NCBI
Rnor_5.0273,921,771 - 73,967,083 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006231994   ⟹   XP_006232056
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8256,007,377 - 56,054,312 (+)NCBI
mRatBN7.2254,279,906 - 54,323,908 (+)NCBI
Rnor_6.0254,897,320 - 54,939,508 (+)NCBI
Rnor_5.0273,921,771 - 73,967,083 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063281518   ⟹   XP_063137588
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8256,010,565 - 56,054,312 (+)NCBI
RefSeq Acc Id: XM_063281519   ⟹   XP_063137589
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8256,007,611 - 56,054,312 (+)NCBI
RefSeq Acc Id: NP_001099884   ⟸   NM_001106414
- UniProtKB: A6KGE1 (UniProtKB/TrEMBL),   A0A8I6ANT7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006232056   ⟸   XM_006231994
- Peptide Label: isoform X2
- UniProtKB: A6KGE1 (UniProtKB/TrEMBL),   A0A8I6ANT7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006232055   ⟸   XM_006231993
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ANT7 (UniProtKB/TrEMBL),   D3ZBZ9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000017666   ⟸   ENSRNOT00000017665
Ensembl Acc Id: ENSRNOP00000097937   ⟸   ENSRNOT00000101780
Ensembl Acc Id: ENSRNOP00000092725   ⟸   ENSRNOT00000101659
RefSeq Acc Id: XP_063137589   ⟸   XM_063281519
- Peptide Label: isoform X2
- UniProtKB: A0A8I6ANT7 (UniProtKB/TrEMBL),   A6KGE1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063137588   ⟸   XM_063281518
- Peptide Label: isoform X2
- UniProtKB: A0A8I6ANT7 (UniProtKB/TrEMBL),   A6KGE1 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000100652   ⟸   ENSRNOT00000162683
Ensembl Acc Id: ENSRNOP00000104667   ⟸   ENSRNOT00000171751

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZBZ9-F1-model_v2 AlphaFold D3ZBZ9 1-262 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1564042 AgrOrtholog
BioCyc Gene G2FUF-54176 BioCyc
Ensembl Genes ENSRNOG00000013217 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000101780 ENTREZGENE
  ENSRNOT00000101780.2 UniProtKB/TrEMBL
  ENSRNOT00000162683 ENTREZGENE
  ENSRNOT00000162683.1 UniProtKB/TrEMBL
  ENSRNOT00000171751.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.10 UniProtKB/TrEMBL
InterPro TPR-containing UniProtKB/TrEMBL
  TPR-like_helical UniProtKB/TrEMBL
  TPR_repeat UniProtKB/TrEMBL
KEGG Report rno:294774 UniProtKB/TrEMBL
NCBI Gene 294774 ENTREZGENE
PANTHER OSMOSIS RESPONSIVE FACTOR UniProtKB/TrEMBL
  TETRATRICOPEPTIDE REPEAT PROTEIN 33 UniProtKB/TrEMBL
PhenoGen Ttc33 PhenoGen
PROSITE TPR UniProtKB/TrEMBL
RatGTEx ENSRNOG00000013217 RatGTEx
SMART TPR UniProtKB/TrEMBL
Superfamily-SCOP SSF48452 UniProtKB/TrEMBL
UniProt A0A8I6ANT7 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L7T1_RAT UniProtKB/TrEMBL
  A0ABK0LRU6_RAT UniProtKB/TrEMBL
  A6KGE1 ENTREZGENE, UniProtKB/TrEMBL
  D3ZBZ9 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-06 Ttc33  tetratricopeptide repeat domain 33  RGD1564042_predicted  similar to osmosis responsive factor (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1564042_predicted  similar to osmosis responsive factor (predicted)  LOC294774  similar to osmosis responsive factor  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC294774  similar to osmosis responsive factor      Symbol and Name status set to provisional 70820 PROVISIONAL