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Gene: Fam110b (family with sequence similarity 110, member B) Rattus norvegicus

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Symbol:

Fam110b

Name:

family with sequence similarity 110, member B

RGD ID:

1563403

Description:

Predicted to be located in centrosome and cytoplasm. Orthologous to human FAM110B (family with sequence similarity 110 member B); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,3',4,4',5-pentachlorobiphenyl; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical protein LOC500400; MGC109194; similar to hypothetical protein MGC39325-like protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	23,587,093 - 23,727,188 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	23,586,867 - 23,799,583 (+)	Ensembl				GRCr8
mRatBN7.2	5	18,789,362 - 18,929,647 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	18,789,389 - 18,929,828 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	21,121,105 - 21,122,753 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	22,719,609 - 22,721,257 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	22,499,916 - 22,501,564 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	18,762,488 - 18,903,818 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	18,901,039 - 18,902,672 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	23,551,429 - 23,691,258 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	19,260,484 - 19,262,132 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	18,238,151 - 18,239,799 (+)	NCBI		Celera
Cytogenetic Map	5	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,3',4,4',5-pentachlorobiphenyl (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

afimoxifene (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

arsenous acid (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

Butylbenzyl phthalate (ISO)

cadmium dichloride (EXP)

carbon nanotube (ISO)

chloroprene (EXP)

chromium(6+) (ISO)

cisplatin (ISO)

clotrimazole (EXP)

cobalt dichloride (EXP)

copper atom (ISO)

copper(0) (ISO)

coumestrol (ISO)

cyclosporin A (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP)

dioxygen (ISO)

dorsomorphin (ISO)

Enterolactone (ISO)

formaldehyde (ISO)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

glyphosate (EXP)

leflunomide (ISO)

melphalan (ISO)

methimazole (EXP)

methoxychlor (EXP)

panobinostat (ISO)

paracetamol (ISO)

phenylephrine (EXP)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

quercetin (ISO)

resveratrol (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

Soman (EXP)

sulfadimethoxine (EXP)

tamoxifen (ISO)

tert-butyl hydroperoxide (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

centrosome (IEA)

cytoplasm (IEA)

cytosol (ISO)

mitochondrion (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
3.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Genomics

Comparative Map Data

Fam110b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	23,587,093 - 23,727,188 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	23,586,867 - 23,799,583 (+)	Ensembl				GRCr8
mRatBN7.2	5	18,789,362 - 18,929,647 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	18,789,389 - 18,929,828 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	21,121,105 - 21,122,753 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	22,719,609 - 22,721,257 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	22,499,916 - 22,501,564 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	18,762,488 - 18,903,818 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	18,901,039 - 18,902,672 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	23,551,429 - 23,691,258 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	19,260,484 - 19,262,132 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	18,238,151 - 18,239,799 (+)	NCBI		Celera
Cytogenetic Map	5	q12	NCBI

FAM110B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	57,994,523 - 58,148,784 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	57,993,956 - 58,204,279 (+)	Ensembl			hg38	GRCh38
GRCh37	8	58,907,082 - 59,061,343 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	59,069,667 - 59,224,831 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	8	54,900,251 - 55,055,401 (+)	NCBI		Celera
Cytogenetic Map	8	q12.1	NCBI
HuRef	8	54,394,353 - 54,549,617 (+)	NCBI		HuRef
CHM1_1	8	58,958,706 - 59,114,538 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	58,416,010 - 58,570,300 (+)	NCBI		T2T-CHM13v2.0

Fam110b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	5,644,009 - 5,801,101 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	5,644,090 - 6,108,223 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	5,644,009 - 5,801,101 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	5,644,090 - 6,108,223 (+)	Ensembl			mm10	GRCm38
MGSCv37	4	5,571,326 - 5,727,091 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	5,571,326 - 5,727,091 (+)	NCBI		MGSCv36	mm8
Celera	4	5,564,088 - 5,720,143 (+)	NCBI		Celera
Cytogenetic Map	4	A1	NCBI
cM Map	4	2.62	NCBI

Fam110b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955454	16,677,016 - 16,678,568 (+)	NCBI	ChiLan1.0	ChiLan1.0

FAM110B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	73,692,519 - 73,846,509 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	49,346,377 - 49,500,379 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	54,450,976 - 54,605,931 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	56,098,349 - 56,252,121 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2

FAM110B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	29	8,892,858 - 9,003,193 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	29	9,000,588 - 9,001,715 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	29	9,172,637 - 9,315,628 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	29	8,939,089 - 9,082,629 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	29	9,080,032 - 9,081,159 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	29	8,942,326 - 9,085,521 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	29	9,068,559 - 9,211,798 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	29	9,347,394 - 9,490,705 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Fam110b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	70,441,099 - 70,616,876 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936496	4,168,564 - 4,317,900 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936496	4,168,564 - 4,334,045 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FAM110B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	74,612,528 - 74,745,989 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	4	74,611,453 - 74,745,988 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	81,521,613 - 81,656,151 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FAM110B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	53,991,740 - 54,141,706 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	54,141,835 - 54,142,947 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
ChlSab1.1 Ensembl	8	54,141,835 - 54,142,947 (+)	NCBI		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666039	87,590,807 - 87,751,785 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fam110b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624744	34,098,804 - 34,167,583 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624744	34,098,211 - 34,247,647 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Fam110b
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	137,093,295 - 137,227,508 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Fam110b
1044 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	75
Count of miRNA genes:	62
Interacting mature miRNAs:	73
Transcripts:	ENSRNOT00000012066
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2293666	Bmd38	Bone mineral density QTL 38	4.4		femur size trait (VT:1000369)	femoral neck cortical cross-sectional area (CMO:0001702)	5	13731153	43590997	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	6922282	81330203	Rat
1358353	Srcrtb2	Stress Responsive Cort Basal QTL 2	3.48	0.003	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	23671493	79046465	Rat
1300117	Hrtrt8	Heart rate QTL 8	3.49		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	5	8627230	52665523	Rat
7394712	Emca13	Estrogen-induced mammary cancer QTL 13			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	14606078	59606078	Rat
634305	Mamtr1	Mammary tumor resistance QTL 1		0.0001	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	17576633	62576633	Rat
1578774	Tcas8	Tongue tumor susceptibility QTL 8	3.47		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	15707451	60707451	Rat
1331771	Rf35	Renal function QTL 35	4.36965		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	91770353	Rat
2312562	Pur18	Proteinuria QTL 18	2.6	0.001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	5	6922282	37468560	Rat
8662454	Vetf3	Vascular elastic tissue fragility QTL 3	27.4		artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	5	7065535	74335773	Rat
1641903	Alcrsp3	Alcohol response QTL 3			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	17486080	62486080	Rat
1331756	Rf34	Renal function QTL 34	4.16275		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	87027358	Rat
631827	Alc4	Alcohol consumption QTL 4	3.5		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	5	12970480	25683802	Rat
2303577	Gluco47	Glucose level QTL 47	3		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	16520019	61520019	Rat
1641922	Alcrsp8	Alcohol response QTL 8			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	5	17486080	62486080	Rat
2313085	Bss59	Bone structure and strength QTL 59	2.9	0.0001	long bone metaphysis morphology trait (VT:0000133)	tibia midshaft total cross-sectional area (CMO:0001715)	5	8627230	53627230	Rat
1600358	Mamtr5	Mammary tumor resistance QTL 5			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	23671493	68671493	Rat

Markers in Region

D8S1957

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	18,928,315 - 18,928,606 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	18,902,487 - 18,902,777	NCBI	Rnor6.0
Rnor_5.0	5	23,689,927 - 23,690,217	UniSTS	Rnor5.0
RGSC_v3.4	5	19,261,932 - 19,262,222	UniSTS	RGSC3.4
Celera	5	18,239,599 - 18,239,889	UniSTS
Cytogenetic Map	5	q12	UniSTS

RH91772

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	18,928,336 - 18,928,478 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	18,902,508 - 18,902,649	NCBI	Rnor6.0
Rnor_5.0	5	23,689,948 - 23,690,089	UniSTS	Rnor5.0
RGSC_v3.4	5	19,261,953 - 19,262,094	UniSTS	RGSC3.4
Celera	5	18,239,620 - 18,239,761	UniSTS
Cytogenetic Map	5	q12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	85	59	6	349	185	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001024341	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437882	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437884	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437885	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237839	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237840	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237843	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763553	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763555	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593567	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110532	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110534	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110535	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288186	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288187	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC091289	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473984	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000012066 ⟹ ENSRNOP00000012067

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	23,661,052 - 23,799,583 (+)	Ensembl
mRatBN7.2 Ensembl	5	18,789,428 - 18,929,828 (+)	Ensembl
Rnor_6.0 Ensembl	5	18,901,039 - 18,902,672 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094688 ⟹ ENSRNOP00000078792

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	23,586,886 - 23,795,965 (+)	Ensembl
mRatBN7.2 Ensembl	5	18,789,389 - 18,929,828 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099345 ⟹ ENSRNOP00000076802

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	23,586,939 - 23,727,939 (+)	Ensembl
mRatBN7.2 Ensembl	5	18,861,172 - 18,929,828 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000124035 ⟹ ENSRNOP00000111157

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	23,655,964 - 23,736,379 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000128574 ⟹ ENSRNOP00000100846

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	23,684,062 - 23,736,379 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000144560 ⟹ ENSRNOP00000110534

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	23,655,964 - 23,736,379 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000146116 ⟹ ENSRNOP00000103914

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	23,586,897 - 23,733,739 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000147200 ⟹ ENSRNOP00000099443

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	23,586,867 - 23,733,739 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000154319 ⟹ ENSRNOP00000110416

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	23,586,908 - 23,736,379 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000167468 ⟹ ENSRNOP00000107622

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	23,712,937 - 23,733,739 (+)	Ensembl

RefSeq Acc Id:

NM_001024341 ⟹ NP_001019512

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	23,724,409 - 23,726,057 (+)	NCBI
mRatBN7.2	5	18,926,868 - 18,928,516 (+)	NCBI
Rnor_6.0	5	18,901,039 - 18,902,703 (+)	NCBI
Rnor_5.0	5	23,551,429 - 23,691,258 (+)	NCBI
RGSC_v3.4	5	19,260,484 - 19,262,132 (+)	RGD
Celera	5	18,238,151 - 18,239,799 (+)	RGD

Sequence:

show sequence

CAGCCTTCAGGGAGAAGAAAGGAGGCAGCCAAGGCTATTAAAAGGAACTTGTGGCTTGTGGCCT
TTTTGTGTAGGAGCAGTCTGGAAGGGGAGAAAAGTGCACCGAAGCCACAGTGGCGGTTAATGAG
CTGTGAGATGAGGCGCAGCCGCGACTGACACTGCTTCCAGGATCCTTCATCTGCCCTTTGTGCT
TCGTGTACATGTGTCTGTTCAGGCCGGCCAGAGGCGCCCAGAAGAGCATCCACCACGGCTGCCG
GGGAAAGACCGCCCACCATGCCCACGGAGACGCTACAGACAGGTAGCATGGTGAAGCCTGTCAG
CCCCGCGGGCACCTTCACGTCGGCGGTGCCCCTGCGCATCCTGAACAAAGGACCCGACTACTTC
CGCAGGCAGGCTGAGCCCAACCCCAAGAGACTCAGTGCGGTAGAGAGACTAGAGGCTGACAAGG
CCAAATATGTCAAGAGCCAGGAAGTGATCAATGCTAAACAGGAGCCAGTGAAGCCGGCCGTGTT
GGCCAAGCCCCCTGTGTGCCCAGGAGCCAAACGAGTACTGGGCAGCCCCACTCTCAAGGTGTTC
GGCAACCATGCCAAGACCGAGAGCGGCGTGCAACGCGAGACCCTCAAGCTTGAGATCCTCAAGA
ACATCATCAACAGCTCAGAGGGCTCCAGCTCTGGCTCTGGCCACAAGCATAGCTCCCGAAACTG
GCCGCCTCACAGGGACACCACTGAGCTGCACCGGCATTCCTTCGCAGAGTCGCTGAAGGTGTAC
CCTACACCTGGCCGTGGCAGCCCGCAGGAGAGCAGCTCCCACGTGAGCAGGAGGCTGCTGGAGC
AGTCTGCGGAGTCCTTCCTGCATGTCTCACACAGCTCCTCAGACATCCGCAAAGTGACCAGTGT
GAAGCCCCTTAAAGCCATCCCCTGCAGCAGTTCTGCCCCTCCCCTGCCTCCCAAGCCCAAGGTG
GCTGCTATGAAGTCCCCTGATGCTGACCAGGTGGAACCAGCCTGTGGGGTCAGCCGGAGACCTT
CCCTTCAGCGGTCCAAGTCAGACTTGAGTGACAGGTATTTCCGAGTAGATGCAGACGTGGAGAG
GTTCTTCAACTACTGTGGACTTGACCCAGAAGAGCTGGAAAACCTTGGCATGGAGAACTTTGCC
AGGGCTAATTCTGACATCATATCTCTCAACTTCCGCAGTGCAAGCATGATCAGCTCAGACTGTG
AACAGTCTCAGGACAGTAACAGTGACCTTAGAAATGACGACAGTGCCAATGACCGGGTGCCATA
CGGCATTTCTGCCATCGAGAGAAATGCTAGAATCATCAAGTGGCTGTATAGCATCAAACAAGCT
AGAGAGTCACAGAAGGTGTCCCACGTGTAAGAGGCGCAGTGGTGAAAAGGAGGGGGGGTGGGTC
TGTCTGTGCATACACCGTTGTGAAGGTTGTGAGGTCTCCTTGAAGTGTCGTGAGCTTCTCCACT
TTGTGTTGCTTGTTGTGCAATGTTCTCAAGTTGCATGCCTGTCAACATGGCAACTGGCCTGGCT
TCCTTCTCACACCTCGCAGGGCCTTGCTGAACACTCATCTGCCAAAAGTTCCCGGCCAGAATCT
GATTAGGGCTTTGCTCTTAAGCAAAACTGTTTACAGAAAGAAAAGAAAAAAAAAAAAAAAAAAA
AAAAAA

hide sequence

RefSeq Acc Id:

XM_006237839 ⟹ XP_006237901

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	23,661,581 - 23,727,188 (+)	NCBI
mRatBN7.2	5	18,863,763 - 18,929,647 (+)	NCBI
Rnor_6.0	5	18,835,030 - 18,903,818 (+)	NCBI
Rnor_5.0	5	23,551,429 - 23,691,258 (+)	NCBI

Sequence:

show sequence

TCCCACATCAGTCACTGATTAAGAAAATGCCCCACAGACGGTGCCCCTACAGGCCAGTCTCAAG
GATGCATACTCTTGTGTCAAGTTGTTGAGACCAAAATAAAAACAACAAAACAAGAGCAACAAAA
ACAGGACAGCAATCCTGGGAGGCTGATACAGGAAAGACCTACAGGAATAAGTCCAGCCATCATC
CAGATTACCTGAGGTCTTCCGCCACTCTTTTCCCATTTTGAACTTTGTGTTTGGTTCTCTTCCT
GCTGCACTTCCCAGCCTCTTTAGCCTCCCATGACCTTTGCAGCTTCTGACGTGGTCACCAAAGA
GATAGCAGAGAAGTGGCCCAGTACTGGCCAGCCTCTTACCCTCTATACCCAGCATAGGTTCCTT
CAGAGTCCCATGCTGCACTGCAGTTCACTGGGACCTTAGTGCTCACTCATTTGCTCATTAGTAA
CAACAGTGACCATTGTTTTCCCTGTCATGGTGGAAACTCTGTTAGCATCAGAATCCTGTAGTTT
TCCTCAGCTCAGCCTGTCTTTATACCTGGTGAAAGAATGCTTCTTTTGTTCCAAAATCAAGGAT
GAGTTGACTGAGATTCAAAGAGAAGTGTTTATTACCTGTGTGTGTGTGTGTGTGTGTGTGTACA
TGTGTACATGTGTACATGTGTTCCATGCACAGATAATCTATTACCTCGGCTCCCTCATGGAGTG
GCCTTTTGAAAGACTACTGATGACTTGTTATTCTAGTTCAAACAAATATTGGGATGTGCTGGAG
GTTAAGATCCAAGAAAGAACAATTGCTTCCTTCTCTTGGAAAGTATCTGTTTAATGTCTTCAAC
AAAATAAGCAAAAACAAATTAATCAAACAGCTTTTAGTGCCTATTTTGAGCTATCGGTCTGTTC
AATGAAGAGGAAGGTAAAAACTGTTGACGTTTCCTAGACAAATGCTCAAAAGTGTTACTAGTCT
GGATCCCACTGTCGGCAGGGGCTGTGCTTCAGCCTAAGGCACCAACCGAGCTCTTTCCGAGTTC
TGCCTAGTGAGGACTGTGATGGGCTCTATCGGTCACTATAGTACCCAGCAACCCCTTCCCCTGG
CACACCTCTCTCAATCTTATATAGTTCCAGGTTGCTGTGGATGTCAGCATTCCTGCCCAAACCT
CACTCATGAGGGCCTGTACCAACCCTCATGCATTCCCTGGGGATACATGAGTCAAGCCATTCCT
CACACTGCTTTGTTTCCAAAAGAAACAGTCATGTGTTTTTGGTCAGTATTTGTTTCCTATTTCT
CTTGACGATTTCTTAGGAACATCTGAGCAAATTGCAGTGCCTGTGGAACAGGGCAAGCTCTTTG
TAGCAAGTTTTAGCTCAATATCAAAAGAATGGAATGTGTGGCAGTAAGAGACTTACACTACATC
CTCGACGTGGAACTTGGCTTTGTAGAGCAGACTCTTGTACAGGAATTCACAGAAGAGAAGATTT
GTTCGCTGCTAACCCCGTAGAACCTATCTGGAAGAAGAAGAAAACTAACGCTGAGGGAAAGCAC
AGGTGGCTTGATTCAAGGCTAACCCTGTCTTTACTAGGCAAGTTCTCTCTTCCTCTTCCTTCTG
AATTTTCGGTCTGAAGTTTAGTTTCTCATTACAAACCCAAATACTTCTGAAATGGATGTTTCCC
AATCTATTTTGTAAGTCGTTGAGATTCAGTTATGTCTATAATTTCCTAACGACTGCTGCATCCC
CAGACAACCAAGGATGTTCCATATACAGAAGTAGGGTGATGACTTCAAACTGCAGTGAGTGCTT
GTGAAAGATGTGTGCGGCCGGCAGCCTTGCTGTCAGCACCATCACCATTTATTGTTTAATTATT
TATTGCTTCCTTTGATAGAGGGAAGGAAGGAAGGAAAAGGAATATCAAATTATTCCATGAAGTG
ATGGCTTAATTTTGACCTCATATGCTGAGTGCTTAGAGCTCACTGGTAATAAATAATCTTTTGA
GTTGACGCCTTCTGTTATGTCCAAGAATCAGAGACGTCTAGACACTTGCCAAAGGTAGCACAGC
TTGGAAATGAAAGATCTAGAAAGTAAGCCCAGGAAGCCCTCGGATAATTACAACACAAACTTTT
CATTCAAAACCAAGCCACCTCTCACAGAGCTTGGCTCTAAGGGCTACATTTCCCACTAAATGTA
TGATAGGCAAATTTGCCTTTTACAATAACTTGAGATCACTTGTTCGCTTTGAGCTGCGAATATT
TAATCATTATACTCAAGATGATGATCTCAGACACCTTGATTAGCATTTTCCACTGTGGGTGGAA
ATTTGCACGGCTTTTTAAACTATATTGTGGAGAAATTGATCAGCACTTTTGACAATTAGTGGCA
AATTACTAATCATGGTAAATAAAGCCATGCGTGGATTTTCTAACTCCCACACTAATGTGTCTGT
GCCTCCAAAGTGATTACATTTCTTCAGTGCTGGGATCTAAGTAAGTCAGCAGGTAGCACACTCA
TTGATCTAAATACTCTTTGTTTCTCTAGATTGGGGGGAAAATAAGAATGCATTTTAAATATCAC
TTACGGTTCAGGAGGTGATACATTAATCCTTAAAATGACAGAAAATCAGGATGATTGTGTCTGT
GGGGTTTAATTTATTAAAATTTAATTTGCTCCCGTGCCTTGCTCCAGTAGCTCTTGTGCTAGCA
AACTAGCTATAATTAGATTAGCAGCCTGCTCAGTGCTGGTGACAGCCTGTGCCTCAGAGAGCAT
GTGCTGGACTCCGCCTGTGCCTCATCCTCATTGGCTGGCATTGCTGCTCAGCCGTTTGATAGGT
TTCCACAGTAATCTTTATGCTGCATTAGAGACATAGATACAGGGCACTGTGCTGCGTTCTTGCA
GAAGATAGGCAAGGTGCTTGGTTGGTCACATTAAAGAAGGAATACGACCCGGCCGAGCAGGTGG
TCTTTGTTGCAAAGACTCGTGGACTAAGGACCTGCAGCTAGCTGCGGGGGAGGTCAGTGAAGGA
GTCTCTCGGTTCACGATACCTCCTGCTGCAGAGAGCGCTTTAAGCAAGGAAGGCTTTCCTTGGC
TTCTGTCTGCATTCCATAAAATACTCCTTGCCTTTTAGCTCTGCCTGCAGTTGAGCACAAAGAC
CTGAAGGAGACTCCCACAGCCTTCAGGGAGAAGAAAGGAGGCAGCCAAGGCTATTAAAAGGAAC
TTGTGGCTTGTGGCCTTTTTGTGTAGGAGCAGTCTGGAAGGGGAGAAAAGTGCACCGAAGCCAC
AGTGGCGGTTAATGAGCTGTGAGATGAGGCGCAGCCGCGACTGACACTGCTTCCAGGATCCTTC
ATCTGCCCTTTGTGCTTCGTGTACATGTGTCTGTTCAGGCCGGCCAGAGGCGCCCAGAAGAGCA
TCCACCACGGCTGCCGGGGAAAGACCGCCCACCATGCCCACGGAGACGCTACAGACAGGTAGCA
TGGTGAAGCCTGTCAGCCCCGCGGGCACCTTCACGTCGGCGGTGCCCCTGCGCATCCTGAACAA
AGGACCCGACTACTTCCGCAGGCAGGCTGAGCCCAACCCCAAGAGACTCAGTGCGGTAGAGAGA
CTAGAGGCTGACAAGGCCAAATATGTCAAGAGCCAGGAAGTGATCAATGCTAAACAGGAGCCAG
TGAAGCCGGCCGTGTTGGCCAAGCCCCCTGTGTGCCCAGGAGCCAAACGAGTACTGGGCAGCCC
CACTCTCAAGGTGTTCGGCAACCATGCCAAGACCGAGAGCGGCGTGCAACGCGAGACCCTCAAG
CTTGAGATCCTCAAGAACATCATCAACAGCTCAGAGGGCTCCAGCTCTGGCTCTGGCCACAAGC
ATAGCTCCCGAAACTGGCCGCCTCACAGGGACACCACTGAGCTGCACCGGCATTCCTTCGCAGA
GTCGCTGAAGGTGTACCCTACACCTGGCCGTGGCAGCCCGCAGGAGAGCAGCTCCCACGTGAGC
AGGAGGCTGCTGGAGCAGTCTGCGGAGTCCTTCCTGCATGTCTCACACAGCTCCTCAGACATCC
GCAAAGTGACCAGTGTGAAGCCCCTTAAAGCCATCCCCTGCAGCAGTTCTGCCCCTCCCCTGCC
TCCCAAGCCCAAGGTGGCTGCTATGAAGTCCCCTGATGCTGACCAGGTGGAACCAGCCTGTGGG
GTCAGCCGGAGACCTTCCCTTCAGCGGTCCAAGTCAGACTTGAGTGACAGGTATTTCCGAGTAG
ATGCAGACGTGGAGAGGTTCTTCAACTACTGTGGACTTGACCCAGAAGAGCTGGAAAACCTTGG
CATGGAGAACTTTGCCAGGGCTAATTCTGACATCATATCTCTCAACTTCCGCAGTGCAAGCATG
ATCAGCTCAGACTGTGAACAGTCTCAGGACAGTAACAGTGACCTTAGAAATGACGACAGTGCCA
ATGACCGGGTGCCATACGGCATTTCTGCCATCGAGAGAAATGCTAGAATCATCAAGTGGCTGTA
TAGCATCAAACAAGCTAGAGAGTCACAGAAGGTGTCCCACGTGTAAGAGGCGCAGTGGTGAAAA
GGAGGGGGGGTGGGTCTGTCTGTGCATACACCGTTGTGAAGGTTGTGAGGTCTCCTTGAAGTGT
CGTGAGCTTCTCCACTTTGTGTTGCTTGTTGTGCAATGTTCTCAAGTTGCATGCCTGTCAACAT
GGCAACTGGCCTGGCTTCCTTCTCACACCTCGCAGGGCCTTGCTGAACACTCATCTGCCAAAAG
TTCCCGGCCAGAATCTGATTAGGGCTTTGCTCTTAAGCAAAACTGTTTACAGAAAGAAAAGAAA
AAAAAAAAAAAAAAAAACGGTTTCGATTTCTTCAATATTTATGTGTTTTTTGTGTTTTTATACC
CTGCGCTATTGTGTCTTAATTAAAAGTTTTATCAACTGGCTTTTAAGTTGAGAGCAGAATCTTT
TTGAAACAAAAAAGCCACTTTGCCTACATGGGAGACCATAACACTGGGGAAATATATGGGACTT
GCCACCAAATACAGAATGACAGCCAGGCTGGAGTTCATTTATGTGAAATCAAGTGGTGGGCCTT
GACCTTGTGCTTCACATGTTGGCATTTTCTTGCCACTTTGTGAAGCACTGTGGGGCAACAGTAC
AGTCCTCGGTCCAATTAAGTGTATATGTTGGTATTTTTGTAGAACTGACCCCAGGAAAGACAAT
CAGACAAAACCCAGGATAGGAGGTTCTATATTGATTGGGAGGGGAGGGAAGGGAGACAGTTGAT
GCTGTTCAAAGTGGGATAATTCATAAATATCTAGTATTAACCTTACAGAAGTGCCATTCGACAG
CTGATTAAAGCTGATACAGAATGCTATCTTTAAAACATTATTTCGTTGGATTTTATTTGTTTTG
TGCTTTTGGCCAAGAATTAACTCATGTTGTTTCTCTCCCTTGCTCCCTTGGTAGTTGTTCTGTT
CAGGGCGGATGGGTTGGTCTTCTGCAGGTTTGCACTCTGAAGGGAGGTGAGAATACCATCCGTG
TCAGTATAGTCTCCATTCCACAGTATCCACGTGCTGGCCGCTTCACACCTCAGCAGTGTGACTC
TGTTACCTCGCTTATACTCCTCTCTAAAGCCGTGGGTATTTGTTAGAGCTCTAGAAAACTGTAG
AAACAATATAGCTTTCCACTCTGTTGTCTCTTGTTGCCTCTTCCCACAATAGCCTGCCCTCCCT
CGGGGTCATTTCAGGAGCTGTGAGCCAGCTGCCAGCGTTGGCAATGGACGAGGAGGACACGGGT
GGGCTGCTCCACTGCCTCACAACCCACAGGTTCGCAGCAGAAGCACCTCGGTCCTCATCAGCTA
CTAGGAGCCTTGAAACGGTGTGAATGCTGTAAGATTCTGTACATACTTGAGTTGTTCTGGAATC
TAAGAAGAAAGTTATGCTAATAAATAGCTCTGGTGTAGGCTTTA

hide sequence

RefSeq Acc Id:

XM_006237840 ⟹ XP_006237902

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	23,618,591 - 23,727,188 (+)	NCBI
mRatBN7.2	5	18,789,362 - 18,929,647 (+)	NCBI
Rnor_6.0	5	18,762,488 - 18,903,818 (+)	NCBI
Rnor_5.0	5	23,551,429 - 23,691,258 (+)	NCBI

Sequence:

show sequence

TGGAGACACGCGCTCTGGGCCGCAGCAACTGGCTCCAAGTTCCCTCCCTCGCTCTCCCGCGGAG
CCTGCCTGAGCCCGCCCCTTCGGTGCGGAGGAGCAAACGCGGCCGCCGTCAGCCCAGCCCTCCG
TTGCTGCCTGATCGCGGCCCGTTCGGCTAACCCGGTCCACTCCGAGCCGGCGGCGAGGACTCGG
CGGCCACTTCATCCTGGCCTGTAGTGCCTCGCGGTCCCCAAGCTCCTCCTCGCGGTCTCCGAAG
CCTTGTGCCTGGCCTGGACGCTTTGCAGGGACCGGAGCGCGACCAAGAAATCCCAACGCAGACA
TCACTCCTATCTTTTCTGAGTCTTGAATTGAAAGCTTCAAGGACTCTACAGCCTAAAAGTGAAA
TAAAAGATACCTCCTGCTGCAGAGAGCGCTTTAAGCAAGGAAGGCTTTCCTTGGCTTCTGTCTG
CATTCCATAAAATACTCCTTGCCTTTTAGCTCTGCCTGCAGTTGAGCACAAAGACCTGAAGGAG
ACTCCCACAGCCTTCAGGGAGAAGAAAGGAGGCAGCCAAGGCTATTAAAAGGAACTTGTGGCTT
GTGGCCTTTTTGTGTAGGAGCAGTCTGGAAGGGGAGAAAAGTGCACCGAAGCCACAGTGGCGGT
TAATGAGCTGTGAGATGAGGCGCAGCCGCGACTGACACTGCTTCCAGGATCCTTCATCTGCCCT
TTGTGCTTCGTGTACATGTGTCTGTTCAGGCCGGCCAGAGGCGCCCAGAAGAGCATCCACCACG
GCTGCCGGGGAAAGACCGCCCACCATGCCCACGGAGACGCTACAGACAGGTAGCATGGTGAAGC
CTGTCAGCCCCGCGGGCACCTTCACGTCGGCGGTGCCCCTGCGCATCCTGAACAAAGGACCCGA
CTACTTCCGCAGGCAGGCTGAGCCCAACCCCAAGAGACTCAGTGCGGTAGAGAGACTAGAGGCT
GACAAGGCCAAATATGTCAAGAGCCAGGAAGTGATCAATGCTAAACAGGAGCCAGTGAAGCCGG
CCGTGTTGGCCAAGCCCCCTGTGTGCCCAGGAGCCAAACGAGTACTGGGCAGCCCCACTCTCAA
GGTGTTCGGCAACCATGCCAAGACCGAGAGCGGCGTGCAACGCGAGACCCTCAAGCTTGAGATC
CTCAAGAACATCATCAACAGCTCAGAGGGCTCCAGCTCTGGCTCTGGCCACAAGCATAGCTCCC
GAAACTGGCCGCCTCACAGGGACACCACTGAGCTGCACCGGCATTCCTTCGCAGAGTCGCTGAA
GGTGTACCCTACACCTGGCCGTGGCAGCCCGCAGGAGAGCAGCTCCCACGTGAGCAGGAGGCTG
CTGGAGCAGTCTGCGGAGTCCTTCCTGCATGTCTCACACAGCTCCTCAGACATCCGCAAAGTGA
CCAGTGTGAAGCCCCTTAAAGCCATCCCCTGCAGCAGTTCTGCCCCTCCCCTGCCTCCCAAGCC
CAAGGTGGCTGCTATGAAGTCCCCTGATGCTGACCAGGTGGAACCAGCCTGTGGGGTCAGCCGG
AGACCTTCCCTTCAGCGGTCCAAGTCAGACTTGAGTGACAGGTATTTCCGAGTAGATGCAGACG
TGGAGAGGTTCTTCAACTACTGTGGACTTGACCCAGAAGAGCTGGAAAACCTTGGCATGGAGAA
CTTTGCCAGGGCTAATTCTGACATCATATCTCTCAACTTCCGCAGTGCAAGCATGATCAGCTCA
GACTGTGAACAGTCTCAGGACAGTAACAGTGACCTTAGAAATGACGACAGTGCCAATGACCGGG
TGCCATACGGCATTTCTGCCATCGAGAGAAATGCTAGAATCATCAAGTGGCTGTATAGCATCAA
ACAAGCTAGAGAGTCACAGAAGGTGTCCCACGTGTAAGAGGCGCAGTGGTGAAAAGGAGGGGGG
GTGGGTCTGTCTGTGCATACACCGTTGTGAAGGTTGTGAGGTCTCCTTGAAGTGTCGTGAGCTT
CTCCACTTTGTGTTGCTTGTTGTGCAATGTTCTCAAGTTGCATGCCTGTCAACATGGCAACTGG
CCTGGCTTCCTTCTCACACCTCGCAGGGCCTTGCTGAACACTCATCTGCCAAAAGTTCCCGGCC
AGAATCTGATTAGGGCTTTGCTCTTAAGCAAAACTGTTTACAGAAAGAAAAGAAAAAAAAAAAA
AAAAAAAACGGTTTCGATTTCTTCAATATTTATGTGTTTTTTGTGTTTTTATACCCTGCGCTAT
TGTGTCTTAATTAAAAGTTTTATCAACTGGCTTTTAAGTTGAGAGCAGAATCTTTTTGAAACAA
AAAAGCCACTTTGCCTACATGGGAGACCATAACACTGGGGAAATATATGGGACTTGCCACCAAA
TACAGAATGACAGCCAGGCTGGAGTTCATTTATGTGAAATCAAGTGGTGGGCCTTGACCTTGTG
CTTCACATGTTGGCATTTTCTTGCCACTTTGTGAAGCACTGTGGGGCAACAGTACAGTCCTCGG
TCCAATTAAGTGTATATGTTGGTATTTTTGTAGAACTGACCCCAGGAAAGACAATCAGACAAAA
CCCAGGATAGGAGGTTCTATATTGATTGGGAGGGGAGGGAAGGGAGACAGTTGATGCTGTTCAA
AGTGGGATAATTCATAAATATCTAGTATTAACCTTACAGAAGTGCCATTCGACAGCTGATTAAA
GCTGATACAGAATGCTATCTTTAAAACATTATTTCGTTGGATTTTATTTGTTTTGTGCTTTTGG
CCAAGAATTAACTCATGTTGTTTCTCTCCCTTGCTCCCTTGGTAGTTGTTCTGTTCAGGGCGGA
TGGGTTGGTCTTCTGCAGGTTTGCACTCTGAAGGGAGGTGAGAATACCATCCGTGTCAGTATAG
TCTCCATTCCACAGTATCCACGTGCTGGCCGCTTCACACCTCAGCAGTGTGACTCTGTTACCTC
GCTTATACTCCTCTCTAAAGCCGTGGGTATTTGTTAGAGCTCTAGAAAACTGTAGAAACAATAT
AGCTTTCCACTCTGTTGTCTCTTGTTGCCTCTTCCCACAATAGCCTGCCCTCCCTCGGGGTCAT
TTCAGGAGCTGTGAGCCAGCTGCCAGCGTTGGCAATGGACGAGGAGGACACGGGTGGGCTGCTC
CACTGCCTCACAACCCACAGGTTCGCAGCAGAAGCACCTCGGTCCTCATCAGCTACTAGGAGCC
TTGAAACGGTGTGAATGCTGTAAGATTCTGTACATACTTGAGTTGTTCTGGAATCTAAGAAGAA
AGTTATGCTAATAAATAGCTCTGGTGTAGGCTTTA

hide sequence

RefSeq Acc Id:

XM_006237843 ⟹ XP_006237905

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	23,718,642 - 23,727,188 (+)	NCBI
mRatBN7.2	5	18,921,194 - 18,929,647 (+)	NCBI
Rnor_6.0	5	18,895,323 - 18,903,818 (+)	NCBI
Rnor_5.0	5	23,551,429 - 23,691,258 (+)	NCBI

Sequence:

show sequence

GAGAGAGAGAGAGAGAGAGAGATTGAGATTAAAATTTGGCTGCCAAACTACAGATGGCAAGGAT
TTGTATAGTAGAGAGAAGGGAAGAAACAGCATTCACTAATGGAAAGGGTACTGGTCCTGAAGAG
GTTCAAGTTTTGACTTGATTTTTCCACCTGGTTGGAAACGTTTCCCTTCTGTCCAGTTTACAGT
AAGCACATTCAGTCTCTCCTGATGCACACATACCTTTCATTCCCGTTTTTGCTTTCCCTTCTGT
TCTTCACCTTGGCATTTGTATCTTTCTTTTCTTTTACTTTTCTTGCCCCCACCCAAAGGGGTCC
CAGGTATTCATGTATCCAAGGCCAGCCTTGTCCTAGCTATGGCCCTAGGGTAAGCTTGATCCCC
TTTCCTCCACCTCCCAAGTTCTGGAATTACAAGTGTGCATCACCACACCCATCTTATATTTGCA
TTCCTTAAAAGTTATTGCTATGGTATAAGAGCACATCTGTACTAGGAAAGGAAAGAAAAGGGCA
GATATGAAAGCACGGCTAATCTTACTCTTAAATGTGCGGTGTGTTCAGTTTGTTGCTAGGCTGA
CGACATTCCCACCGCAGTATTTAACTACTCTTCATCAGATGGGCCTGAGTCTTCCTCCATTGTG
GCTTTTCTGCTTGACAACTTACACATACCTGCTCAGTCAATAGATAAGAATCGTTTGGTTGAAC
ACAGTGCATAATTTAGTGAGTGTTCCCACTCTGAGCACATTCATCACATTGGAAAAGGATTCAG
AAGGGTGCACACAATTGATAATGACTTTGTTTTTAAATGAGAAAATTCCAGAATGTAGGTACTG
GGAGTGTTCCTAGTCAAACTGCAGTTTTATACTTAAAGTCATAAGGTAAAAGGAAAAACAAGTT
GGAGGAATGCAAAATAGAAGCAGAGGTAGTAGACCAGAGGCCATGTGGTAGAGTGCAGTAGTCA
CACATGCATTGGATCATGTGTGAACAGAAGTGGAGAGCCTCAAAGAATCAGATCTGCAATCCTC
AGTTCAGAGGCCAGCAGCTGCTTTTGCCGCGTACTCCCTTGAATGAACAGGACATTTCCAGCTC
ACCAGAACAACACGTTTGCTTCTATACATAAGCAAATCAAGACTGAGCTATTAGGCAGACTGAG
TGGAATTAGCCAGACCTGCTCTTTGAAGCATTGCTCCCCAGCTTATGCCATAGTGCCCGAGAGA
GTGACCCACTTTCACACTTGGAAACCTCTGTGGGTGTGTGCAGTTCCCACAGGCTGCGCTCTAA
CTCCGGGGGCTTTCTCTCCTGTTTACAGTTTAGAGGGTGTTTCTTGTTTATTTCCCAGAAGTAC
AGAGTAAAGGAGAAGAAACAACTCAGTCGTTTCTGTAGGCAGACTGTAAGCAGACTTGGCTTAC
AGTGTTTCATGGGACAGACTGTTACCCAGAATTCTGGATTTGCTCCTAAGCAACAGAGAGACAT
GTTTCTGGGCAGCCTGAACTGGGGCTTCTTGTTCAAGCCTGGCACTCTCACCTCAGCAGCTTTC
CCTGGCTTACAGGAGTACTGACTTTAGTGTGTTGTCAGTTGTGTTTCGGTGTGGAGAGGATATT
TTCTGGCCCTACCCCCTCAAGGTTCTAAATGTTCCCTAATATTTCATCTTGTATTGAGGCTCCA
GGCAGAGTTTTACCTAAATAACGCCATGAGCAGCTGGCAAAATACAAGTTAGAAGGACGCAAAA
TACTTGCTTTTAAAAATCTGAGTTAGCTTTAGCCATTCCTGTGATGTAGGAATCCAAGTTCTGT
AGTTTACCAATGAAACCAGACATGGGCCTCGTCTCTTCCCTCCTCGATACTCTAATACAGAAGC
ATCTCCTATGATCTAGAAAGAAAGGGGGAATTCGCACCTTCATGGAAATCTCCTGAATCCACCT
TGTCGTTCTTATGTATTATTCTTGAGACTAGGACAGGGCCAGTCACCAGGAAGCCTCTGCCCAG
ACCCGGACTCCCTCAAATATCATGACCCCTCCACCCATAATAGCTTTGGAGATCACATCTGCCC
TGATATAGCCAGCCATTTTGCTATATAAGTCAACCATGTTTCCTGACCCTGGTCTTTTTACCCT
TCAGGTAGCTCAAACCTATTGCCTGAGATAGAATGGGAACCACTTGATCTAAGGGGAAGTCTCT
CCTTTAGTCGGGTTGTTGTCAGGTTCTGCCTCCTCAGTCCTGTGCCAGGACTCTGAGAGCACAC
CCCGGTTGGGATGTAGCCAGTGATAAAGAATGTGCTTCTGCATGAACAAGCCTCCGATTCTGCC
CCCACCACCAAAGGAGGAAAAAAACACAGAGCAAGACTTTATAGTTAATTTTATTTATGGAACA
TTATGAGACTGAGATCAAATTTTCCTTTCCCTAAAAAAAGCATAGTTGCCCAGTCGCAGCCCAG
CAGTTGGCCTCACTGCTCTGATTAATCCCAGCCACACTAGAGACCCTGTGCCAGATGTCAGGGT
TTTGCTCCACAGCATTCCCTGGAGGACCCCTGGTTCCTTTGTCCATGACACTGAGATACAGCTC
CCGGGCACCTGCTGGGTCATCTACAATTAACTCGTCTACACTGTACAGTTCAGAGTATCTCTCC
GGGCCTGTACAGCTGTGCCCCTGACAGTCGTTCCCATGTGAAATAGTGGAGCACAGGCCGTGGA
TTAAGGGAGAGCAACCTATACCACCACATCACATCCAGCTATTGGCTAGCACAGGTAGCAGACA
TCAAATATGACTGTTATTATCCTTGAGTACCAAATGTATCTGTAGCTTTTCCCTTTTCTTAGAA
TCTTCACAGAATGCCTTTTGATTGTTTGGGCATTCTCTTATTACTATTTAAAAATCATTACAGA
AGCTGAGAATGGCCCAGAAGAAAGGGACGAAGAAATAGGAGGTGGCTACAGAGTATCACTGTTT
TTAACATAATCCTTCCATGATGGCTTTGCAAATGTCTAGTAGTTTCTAGGAAGCCTAAGGAGCC
TTCTCAGGGGTGCCAGTCTCAGGAGTGAAGAAAGTCATAGGAAAAGAAGAATAGGGATTTTTGT
ACAAAAGGCTCTTAGGTGCATTGGTATTTCCCAGTCTTGTGAATTCAGAATAATGATTTTTATT
TATTTTTTTAAGAGTTTCGGAGATGACCAGAGCCTGCCTTCCCAGGTAGTTGAGCATGCAGGCA
AGCTGGGCAGTGGTGATAACAGGCTGTGCCTCTGATCATAATAGAGTGAAAGTGGAAGCGAGGA
GAACAGAGAGACGCATAGGCCAGCAAGGATGCCATACCAGTGATGTCGCCTGATCCCTTCCTCA
GAGCAGTTTCCCTGAGAACAGTCCTCGTAGAAGACTTAGGAAATTAAGTCAGTCACCAGTACTC
TACTGTTCAATCTTGAAATTTAAAATGTGTCCCTGTCTTGGGTCCTTGAGCCACAAGGTTTCTG
AGCAGGAATGGATCACAGGAATTTCATCTAGCTAACTCATGCCCATGAAAGGGCACTCAGCTCC
GCTTTCTGGTCCATCGTTGGACGCCTCCTCTCCTCAGGGCTACTCTCCCCAGGCAGAGACCCAA
GGCCCACTCTTCACCTTCTGGTATTTCCCAGACACAGAGGCATTCTGCAGTTTAAAGCTAACCA
GTGGTAAAGTACTATATAGAAGACCCTTTCTTGATCCTCACACAACAAAAATAAAAACAAACAA
ACAAAAATACCCAGAAAAATAGTTGATTATAGGTTTACATTAGATCAGAGACCCAAGGTGAGCC
ATCTGGGTTTTTGATGTACAGAAAGCCGGTAAGGTGGAGCTAAAGAGGTGTGTCCTAATGGCCA
CAGGCTGATGGAAGTCTAGCAAGGCCTCTCTCAGTTGTGTCCTTCCACCCAGCTGTGAACACAC
CTCTCTGAACTGAGGTCCTATAGTCCAACAGGGAGATCAGAGAATTTTATTGTGACCAACTCTT
TCCTGCTCACAAAGATCTCTAGAGATCTTTTGAAGCTTTTGAGATTTTAGACTACTTCAGGGAA
AGTGGGTTGTGGGTTCTATACGTGGCTTCTAAAGGGAGCTGGGTGGGGGCCTTGGGCTTCTATG
GCTAAGGGGTAAAAGTTAGAAAGGAGGTCAGAGAGAAAAGTATTTCTGGGGCTCACAGTGACAC
CTTCCTCATGCAGGCTGACTAGGTGCGTCTCTCCCTTCCATGTGTGATCACCGGGGCTGCACCA
GCCCAGGATTGCTGGTTGCTATGCTGTCTGCTCAGTAGGGCAGCAGAATGCTGCCTTTCACCAA
GACAGCCCTGTCTGCTACCCAGTGAGATGGACCCTAAATAGCATATCACCCAACATAGAGACTG
GAGGAATTAGGGCTTCTTCCAGCAGTTTTGCACTGAAGGAAAGAACTTCATTTAATTTTCATGG
GAGGAGGCAGGGTGCTGTATTTTGTTTTATTTTTTTAACCAAATTGAGGCATCAAAATAGAATC
GCACAATTAATCGCATAAATCGTTATGTTTTCATCGCCTTGGGGTTTCTCAAATATTGCATAGG
AACACATTTTTATTAAAACAAATCCCTTTACAGATTCCCAAAATTGGCTCCAATAGAATAGGAC
AGATTGTATTTAGAGATGAAGCATTTGAGATTATCAAGAGAGATGCCAGTCTTAAGTATCTCAC
ATGAGAGAAAACTTACAGTAATATCACCTTATATGTTGTGCACATTTGTAACTCAACATGTTAG
TTAGATGTATCACCCGCTTAATATTCCTTATTATAAGAGAATGCTGATGAGGTCATTTTCTGGC
TGATTTGGAATGCTAATGGTTGGTAAGTAGGCTCTCCTACTACTAGCAAAAGGAAACAATGTTT
CACACTTGTCAAGTATGAGAAATTATATAGCATTTTATAATTAACTTACGCACTCATATGGTTC
CCCTCCAAGTATTTCTATAATAGTTATTTTTAACTAAATGTAAATTTTAACGAGGTAAACTTCA
CTGGATTCCAGAATAGTGCTTTGAAACAATACTTGCTGAAAGTCAGAAAACCGAAACTATTCCT
TACAGGCTTTTTGTTTGGTTTTGTTTCTTGCCATCCCCTTTTCTCACCACCTTTCCAGTTTTTG
AATTATTAAAGAAATGATTGTTTCAGGTCTTACTGACAGATTGGTCATAAGCAGTCACAAGTTT
TACTTCACTGCAAAAGGGACACAACAGCGCAAATCGCCCACGTTGCTGCTAAAGCAGATGGAGG
TCTTAGGAAGCCCCTAGCTTTTAATGAGCTACAGAACGGAACAGGGCTTGGCTGAACCCTCAGT
TCTCTATTCACGAGTATTTCCTGGGTCTCGCTGTTAAGTGATGCCAGCCAGGCGTGTTTAGGAG
GCGGTTCTCACCAATGGGGAGGCAGCTGGAAGAGTTCCGTGGGAAGCCTCTGCTGCTTTCTTTC
TGGCAAACGCCCACATCTGGCTGCTGCCGGAGGCGGCGCAGGCTCCTGGAGAGGTCCCAGTTGC
CCTCGGTGCTCGGTTAACCGGGAATTGCCAGTTGCAAGCCTCACTGACCTTGGGGGTCTCTTGG
CGGGCTGGGGTGCCACGGAGCTCTGCCTGCAGTTGAGCACAAAGACCTGAAGGAGACTCCCACA
GCCTTCAGGGAGAAGAAAGGAGGCAGCCAAGGCTATTAAAAGGAACTTGTGGCTTGTGGCCTTT
TTGTGTAGGAGCAGTCTGGAAGGGGAGAAAAGTGCACCGAAGCCACAGTGGCGGTTAATGAGCT
GTGAGATGAGGCGCAGCCGCGACTGACACTGCTTCCAGGATCCTTCATCTGCCCTTTGTGCTTC
GTGTACATGTGTCTGTTCAGGCCGGCCAGAGGCGCCCAGAAGAGCATCCACCACGGCTGCCGGG
GAAAGACCGCCCACCATGCCCACGGAGACGCTACAGACAGGTAGCATGGTGAAGCCTGTCAGCC
CCGCGGGCACCTTCACGTCGGCGGTGCCCCTGCGCATCCTGAACAAAGGACCCGACTACTTCCG
CAGGCAGGCTGAGCCCAACCCCAAGAGACTCAGTGCGGTAGAGAGACTAGAGGCTGACAAGGCC
AAATATGTCAAGAGCCAGGAAGTGATCAATGCTAAACAGGAGCCAGTGAAGCCGGCCGTGTTGG
CCAAGCCCCCTGTGTGCCCAGGAGCCAAACGAGTACTGGGCAGCCCCACTCTCAAGGTGTTCGG
CAACCATGCCAAGACCGAGAGCGGCGTGCAACGCGAGACCCTCAAGCTTGAGATCCTCAAGAAC
ATCATCAACAGCTCAGAGGGCTCCAGCTCTGGCTCTGGCCACAAGCATAGCTCCCGAAACTGGC
CGCCTCACAGGGACACCACTGAGCTGCACCGGCATTCCTTCGCAGAGTCGCTGAAGGTGTACCC
TACACCTGGCCGTGGCAGCCCGCAGGAGAGCAGCTCCCACGTGAGCAGGAGGCTGCTGGAGCAG
TCTGCGGAGTCCTTCCTGCATGTCTCACACAGCTCCTCAGACATCCGCAAAGTGACCAGTGTGA
AGCCCCTTAAAGCCATCCCCTGCAGCAGTTCTGCCCCTCCCCTGCCTCCCAAGCCCAAGGTGGC
TGCTATGAAGTCCCCTGATGCTGACCAGGTGGAACCAGCCTGTGGGGTCAGCCGGAGACCTTCC
CTTCAGCGGTCCAAGTCAGACTTGAGTGACAGGTATTTCCGAGTAGATGCAGACGTGGAGAGGT
TCTTCAACTACTGTGGACTTGACCCAGAAGAGCTGGAAAACCTTGGCATGGAGAACTTTGCCAG
GGCTAATTCTGACATCATATCTCTCAACTTCCGCAGTGCAAGCATGATCAGCTCAGACTGTGAA
CAGTCTCAGGACAGTAACAGTGACCTTAGAAATGACGACAGTGCCAATGACCGGGTGCCATACG
GCATTTCTGCCATCGAGAGAAATGCTAGAATCATCAAGTGGCTGTATAGCATCAAACAAGCTAG
AGAGTCACAGAAGGTGTCCCACGTGTAAGAGGCGCAGTGGTGAAAAGGAGGGGGGGTGGGTCTG
TCTGTGCATACACCGTTGTGAAGGTTGTGAGGTCTCCTTGAAGTGTCGTGAGCTTCTCCACTTT
GTGTTGCTTGTTGTGCAATGTTCTCAAGTTGCATGCCTGTCAACATGGCAACTGGCCTGGCTTC
CTTCTCACACCTCGCAGGGCCTTGCTGAACACTCATCTGCCAAAAGTTCCCGGCCAGAATCTGA
TTAGGGCTTTGCTCTTAAGCAAAACTGTTTACAGAAAGAAAAGAAAAAAAAAAAAAAAAAAAAC
GGTTTCGATTTCTTCAATATTTATGTGTTTTTTGTGTTTTTATACCCTGCGCTATTGTGTCTTA
ATTAAAAGTTTTATCAACTGGCTTTTAAGTTGAGAGCAGAATCTTTTTGAAACAAAAAAGCCAC
TTTGCCTACATGGGAGACCATAACACTGGGGAAATATATGGGACTTGCCACCAAATACAGAATG
ACAGCCAGGCTGGAGTTCATTTATGTGAAATCAAGTGGTGGGCCTTGACCTTGTGCTTCACATG
TTGGCATTTTCTTGCCACTTTGTGAAGCACTGTGGGGCAACAGTACAGTCCTCGGTCCAATTAA
GTGTATATGTTGGTATTTTTGTAGAACTGACCCCAGGAAAGACAATCAGACAAAACCCAGGATA
GGAGGTTCTATATTGATTGGGAGGGGAGGGAAGGGAGACAGTTGATGCTGTTCAAAGTGGGATA
ATTCATAAATATCTAGTATTAACCTTACAGAAGTGCCATTCGACAGCTGATTAAAGCTGATACA
GAATGCTATCTTTAAAACATTATTTCGTTGGATTTTATTTGTTTTGTGCTTTTGGCCAAGAATT
AACTCATGTTGTTTCTCTCCCTTGCTCCCTTGGTAGTTGTTCTGTTCAGGGCGGATGGGTTGGT
CTTCTGCAGGTTTGCACTCTGAAGGGAGGTGAGAATACCATCCGTGTCAGTATAGTCTCCATTC
CACAGTATCCACGTGCTGGCCGCTTCACACCTCAGCAGTGTGACTCTGTTACCTCGCTTATACT
CCTCTCTAAAGCCGTGGGTATTTGTTAGAGCTCTAGAAAACTGTAGAAACAATATAGCTTTCCA
CTCTGTTGTCTCTTGTTGCCTCTTCCCACAATAGCCTGCCCTCCCTCGGGGTCATTTCAGGAGC
TGTGAGCCAGCTGCCAGCGTTGGCAATGGACGAGGAGGACACGGGTGGGCTGCTCCACTGCCTC
ACAACCCACAGGTTCGCAGCAGAAGCACCTCGGTCCTCATCAGCTACTAGGAGCCTTGAAACGG
TGTGAATGCTGTAAGATTCTGTACATACTTGAGTTGTTCTGGAATCTAAGAAGAAAGTTATGCT
AATAAATAGCTCTGGTGTAGGCTTTA

hide sequence

RefSeq Acc Id:

XM_039110532 ⟹ XP_038966460

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	23,618,594 - 23,727,188 (+)	NCBI
mRatBN7.2	5	18,789,362 - 18,929,647 (+)	NCBI

RefSeq Acc Id:

XM_039110534 ⟹ XP_038966462

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	23,661,587 - 23,727,188 (+)	NCBI
mRatBN7.2	5	18,863,763 - 18,929,647 (+)	NCBI

RefSeq Acc Id:

XM_039110535 ⟹ XP_038966463

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	23,587,167 - 23,727,188 (+)	NCBI
mRatBN7.2	5	18,789,362 - 18,929,647 (+)	NCBI

RefSeq Acc Id:

XM_063288186 ⟹ XP_063144256

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	23,661,600 - 23,727,188 (+)	NCBI

RefSeq Acc Id:

XM_063288187 ⟹ XP_063144257

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	23,587,093 - 23,727,188 (+)	NCBI

RefSeq Acc Id:

XM_063288188 ⟹ XP_063144258

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	23,684,104 - 23,727,188 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001019512	(Get FASTA)	NCBI Sequence Viewer
	NP_001424811	(Get FASTA)	NCBI Sequence Viewer
	NP_001424812	(Get FASTA)	NCBI Sequence Viewer
	NP_001424813	(Get FASTA)	NCBI Sequence Viewer
	NP_001424814	(Get FASTA)	NCBI Sequence Viewer
	NP_001424815	(Get FASTA)	NCBI Sequence Viewer
	XP_006237901	(Get FASTA)	NCBI Sequence Viewer
	XP_006237902	(Get FASTA)	NCBI Sequence Viewer
	XP_006237905	(Get FASTA)	NCBI Sequence Viewer
	XP_038966460	(Get FASTA)	NCBI Sequence Viewer
	XP_038966462	(Get FASTA)	NCBI Sequence Viewer
	XP_038966463	(Get FASTA)	NCBI Sequence Viewer
	XP_063144256	(Get FASTA)	NCBI Sequence Viewer
	XP_063144257	(Get FASTA)	NCBI Sequence Viewer
	XP_063144258	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH91289	(Get FASTA)	NCBI Sequence Viewer
	EDM11630	(Get FASTA)	NCBI Sequence Viewer
	EDM11631	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000012067.4
	ENSRNOP00000076802
	ENSRNOP00000076802.1
	ENSRNOP00000078792.1
	ENSRNOP00000099443
	ENSRNOP00000100846
	ENSRNOP00000107622
	ENSRNOP00000110416
	ENSRNOP00000110534
	ENSRNOP00000111157
GenBank Protein	Q5BJX5	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001019512 ⟸ NM_001024341

- UniProtKB:

Q5BJX5 (UniProtKB/Swiss-Prot), A6JFN5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPTETLQTGSMVKPVSPAGTFTSAVPLRILNKGPDYFRRQAEPNPKRLSAVERLEADKAKYVKS
QEVINAKQEPVKPAVLAKPPVCPGAKRVLGSPTLKVFGNHAKTESGVQRETLKLEILKNIINSS
EGSSSGSGHKHSSRNWPPHRDTTELHRHSFAESLKVYPTPGRGSPQESSSHVSRRLLEQSAESF
LHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKPKVAAMKSPDADQVEPACGVSRRPSLQRSK
SDLSDRYFRVDADVERFFNYCGLDPEELENLGMENFARANSDIISLNFRSASMISSDCEQSQDS
NSDLRNDDSANDRVPYGISAIERNARIIKWLYSIKQARESQKVSHV

hide sequence

RefSeq Acc Id:

XP_006237902 ⟸ XM_006237840

- Peptide Label:

isoform X1

- Sequence:

show sequence

MPTETLQTGSMVKPVSPAGTFTSAVPLRILNKGPDYFRRQAEPNPKRLSAVERLEADKAKYVKS
QEVINAKQEPVKPAVLAKPPVCPGAKRVLGSPTLKVFGNHAKTESGVQRETLKLEILKNIINSS
EGSSSGSGHKHSSRNWPPHRDTTELHRHSFAESLKVYPTPGRGSPQESSSHVSRRLLEQSAESF
LHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKPKVAAMKSPDADQVEPACGVSRRPSLQRSK
SDLSDRYFRVDADVERFFNYCGLDPEELENLGMENFARANSDIISLNFRSASMISSDCEQSQDS
NSDLRNDDSANDRVPYGISAIERNARIIKWLYSIKQARESQKVSHV

hide sequence

RefSeq Acc Id:

XP_006237901 ⟸ XM_006237839

- Peptide Label:

isoform X1

- Sequence:

show sequence

MPTETLQTGSMVKPVSPAGTFTSAVPLRILNKGPDYFRRQAEPNPKRLSAVERLEADKAKYVKS
QEVINAKQEPVKPAVLAKPPVCPGAKRVLGSPTLKVFGNHAKTESGVQRETLKLEILKNIINSS
EGSSSGSGHKHSSRNWPPHRDTTELHRHSFAESLKVYPTPGRGSPQESSSHVSRRLLEQSAESF
LHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKPKVAAMKSPDADQVEPACGVSRRPSLQRSK
SDLSDRYFRVDADVERFFNYCGLDPEELENLGMENFARANSDIISLNFRSASMISSDCEQSQDS
NSDLRNDDSANDRVPYGISAIERNARIIKWLYSIKQARESQKVSHV

hide sequence

RefSeq Acc Id:	XP_006237905 ⟸ XM_006237843
- Peptide Label:	isoform X1
- UniProtKB:	Q5BJX5 (UniProtKB/Swiss-Prot), A6JFN5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPTETLQTGSMVKPVSPAGTFTSAVPLRILNKGPDYFRRQAEPNPKRLSAVERLEADKAKYVKS QEVINAKQEPVKPAVLAKPPVCPGAKRVLGSPTLKVFGNHAKTESGVQRETLKLEILKNIINSS EGSSSGSGHKHSSRNWPPHRDTTELHRHSFAESLKVYPTPGRGSPQESSSHVSRRLLEQSAESF LHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKPKVAAMKSPDADQVEPACGVSRRPSLQRSK SDLSDRYFRVDADVERFFNYCGLDPEELENLGMENFARANSDIISLNFRSASMISSDCEQSQDS NSDLRNDDSANDRVPYGISAIERNARIIKWLYSIKQARESQKVSHV hide sequence

Ensembl Acc Id:

ENSRNOP00000012067 ⟸ ENSRNOT00000012066

RefSeq Acc Id:	XP_038966460 ⟸ XM_039110532
- Peptide Label:	isoform X1
- UniProtKB:	Q5BJX5 (UniProtKB/Swiss-Prot), A6JFN5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038966463 ⟸ XM_039110535
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038966462 ⟸ XM_039110534
- Peptide Label:	isoform X1
- UniProtKB:	Q5BJX5 (UniProtKB/Swiss-Prot), A6JFN5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000076802 ⟸ ENSRNOT00000099345

Ensembl Acc Id:

ENSRNOP00000078792 ⟸ ENSRNOT00000094688

RefSeq Acc Id:	XP_063144257 ⟸ XM_063288187
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063144256 ⟸ XM_063288186
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063144258 ⟸ XM_063288188
- Peptide Label:	isoform X1
- UniProtKB:	Q5BJX5 (UniProtKB/Swiss-Prot), A6JFN5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000110534 ⟸ ENSRNOT00000144560

Ensembl Acc Id:

ENSRNOP00000103914 ⟸ ENSRNOT00000146116

Ensembl Acc Id:

ENSRNOP00000099443 ⟸ ENSRNOT00000147200

Ensembl Acc Id:

ENSRNOP00000107622 ⟸ ENSRNOT00000167468

Ensembl Acc Id:

ENSRNOP00000111157 ⟸ ENSRNOT00000124035

Ensembl Acc Id:

ENSRNOP00000100846 ⟸ ENSRNOT00000128574

Ensembl Acc Id:

ENSRNOP00000110416 ⟸ ENSRNOT00000154319

Protein Domains

Centrosome-associated FAM110 C-terminal Centrosome-associated FAM110 N-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5BJX5-F1-model_v2	AlphaFold	Q5BJX5	1-366	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1563403	AgrOrtholog
BioCyc Gene	G2FUF-42087	BioCyc
Ensembl Genes	ENSRNOG00000009114	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000012066.5	UniProtKB/Swiss-Prot
	ENSRNOT00000094688.1	UniProtKB/Swiss-Prot
	ENSRNOT00000099345	ENTREZGENE
	ENSRNOT00000099345.1	UniProtKB/Swiss-Prot
	ENSRNOT00000124035	ENTREZGENE
	ENSRNOT00000128574	ENTREZGENE
	ENSRNOT00000144560	ENTREZGENE
	ENSRNOT00000147200	ENTREZGENE
	ENSRNOT00000154319	ENTREZGENE
	ENSRNOT00000167468	ENTREZGENE
IMAGE_CLONE	IMAGE:7306431	IMAGE-MGC_LOAD
InterPro	FAM110	UniProtKB/Swiss-Prot
	FAM110_C	UniProtKB/Swiss-Prot
	FAM110_N	UniProtKB/Swiss-Prot
KEGG Report	rno:500400	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:109194	IMAGE-MGC_LOAD
NCBI Gene	500400	ENTREZGENE
PANTHER	PROTEIN FAM110B	UniProtKB/Swiss-Prot
	PTHR14758	UniProtKB/Swiss-Prot
Pfam	FAM110_C	UniProtKB/Swiss-Prot
	FAM110_N	UniProtKB/Swiss-Prot
PhenoGen	Fam110b	PhenoGen
RatGTEx	ENSRNOG00000009114	RatGTEx
UniProt	A6JFN5	ENTREZGENE, UniProtKB/TrEMBL
	F110B_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-06	Fam110b	family with sequence similarity 110, member B	MGC109194	similar to hypothetical protein MGC39325-like protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-02-09	MGC109194	similar to hypothetical protein MGC39325-like protein			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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