Cinp (cyclin-dependent kinase 2-interacting protein) - Rat Genome Database

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Gene: Cinp (cyclin-dependent kinase 2-interacting protein) Rattus norvegicus
Analyze
Symbol: Cinp
Name: cyclin-dependent kinase 2-interacting protein
RGD ID: 1563395
Description: Predicted to enable preribosome binding activity. Predicted to be involved in ribosomal large subunit biogenesis. Orthologous to human CINP (cyclin dependent kinase 2 interacting protein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; amitrole.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC299334; RGD1563395; similar to cyclin-dependent kinase 2-interacting protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86135,698,477 - 135,720,798 (-)NCBIGRCr8
mRatBN7.26129,878,618 - 129,899,575 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6129,885,570 - 129,899,480 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6130,062,018 - 130,075,774 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06130,358,006 - 130,371,762 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06129,722,451 - 129,736,344 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06135,290,528 - 135,304,422 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6135,290,530 - 135,304,422 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06145,109,734 - 145,123,629 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46135,595,588 - 135,609,484 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera6127,453,447 - 127,467,366 (-)NCBICelera
Cytogenetic Map6q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932  


Genomics

Comparative Map Data
Cinp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86135,698,477 - 135,720,798 (-)NCBIGRCr8
mRatBN7.26129,878,618 - 129,899,575 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6129,885,570 - 129,899,480 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6130,062,018 - 130,075,774 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06130,358,006 - 130,371,762 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06129,722,451 - 129,736,344 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06135,290,528 - 135,304,422 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6135,290,530 - 135,304,422 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06145,109,734 - 145,123,629 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46135,595,588 - 135,609,484 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera6127,453,447 - 127,467,366 (-)NCBICelera
Cytogenetic Map6q32NCBI
CINP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3814102,348,282 - 102,362,890 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl14102,341,102 - 102,362,916 (-)EnsemblGRCh38hg38GRCh38
GRCh3714102,814,619 - 102,829,227 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3614101,884,372 - 101,899,006 (-)NCBINCBI36Build 36hg18NCBI36
Celera1482,869,127 - 82,883,762 (-)NCBICelera
Cytogenetic Map14q32.31NCBI
HuRef1482,991,712 - 83,006,254 (-)NCBIHuRef
CHM1_114102,752,463 - 102,767,114 (-)NCBICHM1_1
T2T-CHM13v2.01496,583,876 - 96,598,485 (-)NCBIT2T-CHM13v2.0
Cinp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912110,839,044 - 110,855,579 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12110,839,044 - 110,855,579 (-)EnsemblGRCm39 Ensembl
GRCm3812110,872,610 - 110,889,145 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12110,872,610 - 110,889,145 (-)EnsemblGRCm38mm10GRCm38
MGSCv3712112,110,832 - 112,127,324 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612111,320,429 - 111,336,921 (-)NCBIMGSCv36mm8
Celera12112,066,045 - 112,082,550 (-)NCBICelera
Cytogenetic Map12F1NCBI
cM Map1260.85NCBI
Cinp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555381,649,068 - 1,655,146 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555381,649,068 - 1,655,146 (-)NCBIChiLan1.0ChiLan1.0
CINP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v215103,501,026 - 103,517,333 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan114102,711,402 - 102,733,827 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01482,969,659 - 82,984,299 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.114102,786,775 - 102,801,135 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl14102,786,775 - 102,801,135 (-)Ensemblpanpan1.1panPan2
CINP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1870,307,464 - 70,332,838 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl870,307,586 - 70,332,845 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha869,820,916 - 69,846,278 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0870,584,457 - 70,609,937 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl870,584,027 - 70,609,944 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1870,249,161 - 70,274,841 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0870,314,086 - 70,339,458 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0870,714,952 - 70,740,490 (-)NCBIUU_Cfam_GSD_1.0
Cinp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244086403,670,708 - 3,681,069 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936835514,849 - 525,146 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936835514,838 - 525,146 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CINP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.27129,378,184 - 129,389,349 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CINP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12480,278,863 - 80,288,270 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2480,278,860 - 80,288,253 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605367,476,093 - 67,485,347 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cinp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247342,091,369 - 2,097,200 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247342,091,320 - 2,097,200 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cinp
57 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:116
Count of miRNA genes:95
Interacting mature miRNAs:109
Transcripts:ENSRNOT00000010598
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat
4145118Mcs26Mammary carcinoma susceptibility QTL 260.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)6106752656132339866Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
10054138Gmadr3Adrenal mass QTL 33.680.00045adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)685140138130140138Rat
1641917Colcr5Colorectal carcinoma resistance QTL 53.180.0009intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)6122549046137801795Rat
71111Iddm8Insulin dependent diabetes mellitus QTL 81.90.002blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)6105156861140994061Rat
61414Pia3Pristane induced arthritis QTL 34.5joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)694968928137848904Rat
1358355Srcrt4Stress Responsive Cort QTL 46.39blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)6100364669140994061Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)685311061133478515Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)688047916133047916Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
61329Eae9Experimental allergic encephalomyelitis QTL 93.7body mass (VT:0001259)change in body weight (CMO:0002045)6122549046140994061Rat
10054123Srcrt6Stress Responsive Cort QTL 62.50.0043blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)685140138130140138Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)672202632130729475Rat
737976Pia24Pristane induced arthritis QTL 24joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)6112636280140994061Rat
2312560Pur20Proteinuria QTL 202.10.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)6125628133137801795Rat
1298087Iddm18Insulin dependent diabetes mellitus QTL 180.0001urine glucose amount (VT:0001758)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)6116506292130245370Rat
2313399Anxrr28Anxiety related response QTL 28aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)6100671796132340886Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)672227641130729205Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
8552796Vie3Viral induced encephalitis QTL 32.6brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)696833997140994061Rat
1300076Glom8Glomerulus QTL 879e-09kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)686894788131894788Rat
2293085Iddm29Insulin dependent diabetes mellitus QTL 297.66blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)6122549046140286318Rat

Markers in Region
RH134370  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26129,885,626 - 129,885,806 (+)MAPPERmRatBN7.2
Rnor_6.06135,290,587 - 135,290,766NCBIRnor6.0
Rnor_5.06145,123,391 - 145,123,570UniSTSRnor5.0
RGSC_v3.46135,595,647 - 135,595,826UniSTSRGSC3.4
Celera6127,453,506 - 127,453,685UniSTS
RH 3.4 Map6785.19UniSTS
Cytogenetic Map6q32UniSTS
RH144050  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26129,891,763 - 129,891,975 (+)MAPPERmRatBN7.2
Rnor_6.06135,296,722 - 135,296,933NCBIRnor6.0
Rnor_5.06145,117,223 - 145,117,434UniSTSRnor5.0
RGSC_v3.46135,601,783 - 135,601,994UniSTSRGSC3.4
Celera6127,459,666 - 127,459,877UniSTS
RH 3.4 Map6785.8UniSTS
Cytogenetic Map6q32UniSTS
BG376521  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26129,887,099 - 129,887,208 (+)MAPPERmRatBN7.2
Rnor_6.06135,292,060 - 135,292,168NCBIRnor6.0
Rnor_5.06145,121,989 - 145,122,097UniSTSRnor5.0
RGSC_v3.46135,597,120 - 135,597,228UniSTSRGSC3.4
Celera6127,454,979 - 127,455,087UniSTS
RH 3.4 Map6784.79UniSTS
Cytogenetic Map6q32UniSTS
BI295617  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26129,889,563 - 129,889,723 (+)MAPPERmRatBN7.2
Rnor_6.06135,294,522 - 135,294,681NCBIRnor6.0
Rnor_5.06145,119,475 - 145,119,634UniSTSRnor5.0
RGSC_v3.46135,599,583 - 135,599,742UniSTSRGSC3.4
Celera6127,457,466 - 127,457,625UniSTS
RH 3.4 Map6785.19UniSTS
Cytogenetic Map6q32UniSTS
RH141781  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26129,885,412 - 129,885,722 (+)MAPPERmRatBN7.2
Rnor_6.06135,290,373 - 135,290,682NCBIRnor6.0
Rnor_5.06145,123,475 - 145,123,784UniSTSRnor5.0
RGSC_v3.46135,595,433 - 135,595,742UniSTSRGSC3.4
Celera6127,453,292 - 127,453,601UniSTS
RH 3.4 Map6785.8UniSTS
Cytogenetic Map6q32UniSTS
UniSTS:236949  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26129,885,673 - 129,885,941 (+)MAPPERmRatBN7.2
Rnor_6.06135,290,634 - 135,290,901NCBIRnor6.0
Rnor_5.06145,123,255 - 145,123,523NCBIRnor5.0
RGSC_v3.46135,595,694 - 135,595,961UniSTSRGSC3.4
Celera6127,453,553 - 127,453,820UniSTS
Cytogenetic Map6q32UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000010598   ⟹   ENSRNOP00000010598
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl6129,885,570 - 129,895,503 (-)Ensembl
Rnor_6.0 Ensembl6135,290,530 - 135,304,422 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000099124   ⟹   ENSRNOP00000084104
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl6129,887,628 - 129,899,480 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000111103   ⟹   ENSRNOP00000096448
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl6129,885,579 - 129,895,446 (-)Ensembl
RefSeq Acc Id: NM_001106758   ⟹   NP_001100228
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86135,706,791 - 135,720,689 (-)NCBI
mRatBN7.26129,885,568 - 129,899,465 (-)NCBI
Rnor_6.06135,290,528 - 135,304,422 (-)NCBI
Rnor_5.06145,109,734 - 145,123,629 (+)NCBI
RGSC_v3.46135,595,588 - 135,609,484 (-)RGD
Celera6127,453,447 - 127,467,366 (-)RGD
Sequence:
RefSeq Acc Id: XM_039112095   ⟹   XP_038968023
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86135,708,750 - 135,720,796 (-)NCBI
mRatBN7.26129,887,529 - 129,899,574 (-)NCBI
RefSeq Acc Id: XM_039112096   ⟹   XP_038968024
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86135,708,750 - 135,720,796 (-)NCBI
mRatBN7.26129,887,529 - 129,899,574 (-)NCBI
RefSeq Acc Id: XM_039112097   ⟹   XP_038968025
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86135,703,875 - 135,720,796 (-)NCBI
mRatBN7.26129,882,649 - 129,899,574 (-)NCBI
RefSeq Acc Id: XM_039112098   ⟹   XP_038968026
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86135,703,875 - 135,720,796 (-)NCBI
mRatBN7.26129,882,649 - 129,899,574 (-)NCBI
RefSeq Acc Id: XM_039112099   ⟹   XP_038968027
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86135,698,477 - 135,720,798 (-)NCBI
mRatBN7.26129,878,618 - 129,899,575 (-)NCBI
RefSeq Acc Id: XM_039112100   ⟹   XP_038968028
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86135,706,801 - 135,720,795 (-)NCBI
mRatBN7.26129,885,578 - 129,899,573 (-)NCBI
RefSeq Acc Id: NP_001100228   ⟸   NM_001106758
- UniProtKB: B0BNM8 (UniProtKB/TrEMBL),   F7F444 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000010598   ⟸   ENSRNOT00000010598
RefSeq Acc Id: XP_038968027   ⟸   XM_039112099
- Peptide Label: isoform X5
- UniProtKB: A0A8I6ALT9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968026   ⟸   XM_039112098
- Peptide Label: isoform X4
- UniProtKB: A0A8I5ZY53 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968025   ⟸   XM_039112097
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038968028   ⟸   XM_039112100
- Peptide Label: isoform X6
- UniProtKB: A6KBP0 (UniProtKB/TrEMBL),   A0A8I6ALT9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968024   ⟸   XM_039112096
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038968023   ⟸   XM_039112095
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000096448   ⟸   ENSRNOT00000111103
Ensembl Acc Id: ENSRNOP00000084104   ⟸   ENSRNOT00000099124

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B0BNM8-F1-model_v2 AlphaFold B0BNM8 1-212 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694836
Promoter ID:EPDNEW_R5358
Type:initiation region
Name:Cinp_1
Description:cyclin-dependent kinase 2-interacting protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.06135,304,448 - 135,304,508EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1563395 AgrOrtholog
BioCyc Gene G2FUF-35859 BioCyc
Ensembl Genes ENSRNOG00000008035 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000010598.6 UniProtKB/TrEMBL
  ENSRNOT00000099124.1 UniProtKB/TrEMBL
  ENSRNOT00000111103.1 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7937483 IMAGE-MGC_LOAD
InterPro Cyclin-dep_Kinase_2_interact UniProtKB/TrEMBL
KEGG Report rno:299334 UniProtKB/TrEMBL
MGC_CLONE MGC:188587 IMAGE-MGC_LOAD
NCBI Gene 299334 ENTREZGENE
PANTHER CYCLIN-DEPENDENT KINASE 2-INTERACTING PROTEIN UniProtKB/TrEMBL
  CYCLIN-DEPENDENT KINASE 2-INTERACTING PROTEIN UniProtKB/TrEMBL
PhenoGen Cinp PhenoGen
PRINTS CDK2IP UniProtKB/TrEMBL
RatGTEx ENSRNOG00000008035 RatGTEx
UniProt A0A8I5ZY53 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ALT9 ENTREZGENE, UniProtKB/TrEMBL
  A6KBP0 ENTREZGENE, UniProtKB/TrEMBL
  B0BNM8 ENTREZGENE, UniProtKB/TrEMBL
  F7F444 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-07 Cinp  cyclin-dependent kinase 2-interacting protein  RGD1563395_predicted  similar to cyclin-dependent kinase 2-interacting protein (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1563395_predicted  similar to cyclin-dependent kinase 2-interacting protein (predicted)  LOC299334  similar to cyclin-dependent kinase 2-interacting protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC299334  similar to cyclin-dependent kinase 2-interacting protein      Symbol and Name status set to provisional 70820 PROVISIONAL