Elapor2 (endosome-lysosome associated apoptosis and autophagy regulator family member 2) - Rat Genome Database

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Gene: Elapor2 (endosome-lysosome associated apoptosis and autophagy regulator family member 2) Rattus norvegicus
Analyze
Symbol: Elapor2
Name: endosome-lysosome associated apoptosis and autophagy regulator family member 2
RGD ID: 1563349
Description: Predicted to be involved in positive regulation of BMP signaling pathway. Predicted to be located in plasma membrane. Predicted to be active in membrane. Orthologous to human ELAPOR2 (endosome-lysosome associated apoptosis and autophagy regulator family member 2); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: endosome/lysosome-associated apoptosis and autophagy regulator family member 2; hypothetical protein LOC502727; LOC502727; RGD1563349; similar to RIKEN cDNA 9330182L06; uncharacterized protein LOC502727; UPF0577 protein KIAA1324-like homolog
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8425,565,298 - 25,760,684 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl425,568,122 - 25,760,684 (-)EnsemblGRCr8
mRatBN7.2424,613,163 - 24,805,729 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl424,613,163 - 24,805,729 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx429,631,142 - 29,823,628 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0425,557,387 - 25,749,897 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0423,930,950 - 24,123,428 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0421,563,848 - 21,757,668 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl421,584,369 - 21,668,570 (-)Ensemblrn6Rnor6.0
Rnor_5.0421,496,030 - 21,689,391 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4422,121,455 - 22,171,462 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera420,113,409 - 20,304,314 (-)NCBICelera
Cytogenetic Map4q12NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:21177533  


Genomics

Comparative Map Data
Elapor2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8425,565,298 - 25,760,684 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl425,568,122 - 25,760,684 (-)EnsemblGRCr8
mRatBN7.2424,613,163 - 24,805,729 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl424,613,163 - 24,805,729 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx429,631,142 - 29,823,628 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0425,557,387 - 25,749,897 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0423,930,950 - 24,123,428 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0421,563,848 - 21,757,668 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl421,584,369 - 21,668,570 (-)Ensemblrn6Rnor6.0
Rnor_5.0421,496,030 - 21,689,391 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4422,121,455 - 22,171,462 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera420,113,409 - 20,304,314 (-)NCBICelera
Cytogenetic Map4q12NCBI
ELAPOR2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38786,876,906 - 87,059,654 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl786,876,906 - 87,059,693 (-)Ensemblhg38GRCh38
GRCh37786,506,222 - 86,688,970 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36786,347,174 - 86,507,467 (-)NCBIBuild 36Build 36hg18NCBI36
Celera781,210,196 - 81,394,037 (-)NCBICelera
Cytogenetic Map7q21.12NCBI
HuRef781,117,463 - 81,300,018 (-)NCBIHuRef
CHM1_1786,436,278 - 86,618,996 (-)NCBICHM1_1
T2T-CHM13v2.0788,126,808 - 88,309,723 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2785,837,967 - 86,020,533 (-)NCBI
Elapor2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3959,316,100 - 9,534,663 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl59,316,118 - 9,531,825 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm3859,266,099 - 9,484,663 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl59,266,118 - 9,481,825 (+)Ensemblmm10GRCm38
MGSCv3759,266,193 - 9,480,717 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv3659,272,166 - 9,486,535 (+)NCBIMGSCv36mm8
Celera59,183,368 - 9,398,334 (+)NCBICelera
Cytogenetic Map5A1NCBI
cM Map53.69NCBI
Elapor2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541047,021 - 98,055 (+)Ensembl
ChiLan1.0NW_00495541047,021 - 98,055 (+)NCBIChiLan1.0ChiLan1.0
ELAPOR2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26104,662,210 - 104,928,841 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17152,930,445 - 153,193,448 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0778,805,691 - 79,037,315 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1792,512,495 - 92,600,586 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl792,516,062 - 92,602,812 (-)EnsemblpanPan2panpan1.1
ELAPOR2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11413,074,575 - 13,245,312 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1413,076,932 - 13,245,319 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1412,708,669 - 12,879,376 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01412,836,078 - 13,007,154 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1412,836,091 - 13,039,430 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11413,041,126 - 13,211,941 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01412,766,976 - 12,937,955 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01413,050,937 - 13,221,788 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Elapor2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511867,406,810 - 67,470,063 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936653560,858 - 718,063 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936653560,378 - 621,497 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ELAPOR2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl993,540,277 - 93,723,880 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1993,540,846 - 93,724,739 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29103,019,636 - 103,204,985 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ELAPOR2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12161,874,598 - 62,052,952 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2161,956,900 - 62,053,934 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604242,003,133 - 42,182,843 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Elapor2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473934,390,409 - 34,528,985 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473934,390,622 - 34,528,831 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Elapor2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v16141,094,724 - 141,276,774 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Elapor2
1281 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:356
Count of miRNA genes:220
Interacting mature miRNAs:270
Transcripts:ENSRNOT00000007723
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2302371Stl22Serum triglyceride level QTL 225.15blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)41308014658080146Rat
2303585Bw86Body weight QTL 864body mass (VT:0001259)body weight (CMO:0000012)41564430960644309Rat
8552903Pigfal2Plasma insulin-like growth factor 1 level QTL 27.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)4132668025Rat
724557Plsm1Polydactyly-luxate syndrome (PLS) morphotypes QTL 10.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)4128392287Rat
9590100Sffal4Serum free fatty acids level QTL 47.360.05blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)4132668025Rat
8552906Pigfal3Plasma insulin-like growth factor 1 level QTL 3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)41103870656038706Rat
1357341Gluco5Glucose level QTL 56.4adipocyte free fatty acid secretion trait (VT:0010465)absolute change in adipocyte free fatty acid secretion per unit volume (CMO:0001446)4134142783Rat
1357343Gluco4Glucose level QTL 40.00002adipocyte glucose uptake trait (VT:0004185)adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874)4134142783Rat
8552782Vie1Viral induced encephalitis QTL 126.4brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)4135396961Rat
6478766Anxrr47Anxiety related response QTL 470.09637locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)41103870656038706Rat
70222Eae2Experimental allergic encephalomyelitis QTL 24.3nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)42228845340471598Rat
631642Stl2Serum triglyceride level QTL 23.3blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4589457557613242Rat
6478769Anxrr48Anxiety related response QTL 480.02514locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)41103870656038706Rat
631261Tcas3Tongue tumor susceptibility QTL 36.88tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)41170660492690519Rat
61333Gluco16Glucose level QTL 164.30.00001adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)4131106810Rat
2313401Anxrr27Anxiety related response QTL 27aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)41890069763900697Rat
61408Scl23Serum cholesterol level QTL 230.0005blood HDL phospholipid amount (VT:0010504)serum high density lipoprotein phospholipid level (CMO:0001567)4128392287Rat
631209Bw2Body weight QTL24.2retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)4145429897Rat
8552803Bw144Body weight QTL 14416body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)4135396961Rat
8694374Bw155Body weight QTL 1553.390.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)41103870656038706Rat
8552801Bw143Body weight QTL 1437.3body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)4135396961Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45889999148002343Rat
9589046Scfw2Subcutaneous fat weight QTL 25.540.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)4132668025Rat
61412Pia2Pristane induced arthritis QTL 23.9joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)42228845363245191Rat
8552807Vie4Viral induced encephalitis QTL 47.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)41890069763900697Rat
6478724Anxrr35Anxiety related response QTL 350.00449defecation behavior trait (VT:0010462)defecation measurement (CMO:0000997)41103870656038706Rat
61351Bp33Blood pressure QTL 330.0018arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4128392287Rat
61415Eae11Experimental allergic encephalomyelitis QTL 112.9nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)4140471598Rat
1641905Colcr1Colorectal carcinoma resistance QTL 14.30.0003intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)4842855130449094Rat
619616Bp79Blood pressure QTL 790.0292arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4588999950889999Rat
8552809Vie5Viral induced encephalitis QTL 525.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)4135396961Rat
7387227Uae40Urinary albumin excretion QTL 402.90.0052urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)41891315163913151Rat
738021Hcar13Hepatocarcinoma resistance QTL 134.3liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)4133538816Rat
1358203Stl19Serum triglyceride level QTL 192.80.002blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)42192515166925151Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)4163900697Rat
9590304Scort17Serum corticosterone level QTL 174.960.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)41103870656038706Rat
9589097Slep11Serum leptin concentration QTL 115.090.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)4132668025Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)412212457182430611Rat
1354665Stl10Serum triglyceride level QTL 103.57blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)42228845345429897Rat
1300141Bp178Blood pressure QTL 178arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)41075870140490708Rat

Markers in Region
SGC34512  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2127,476,740 - 7,476,874 (+)MAPPERmRatBN7.2
mRatBN7.2424,652,330 - 24,652,466 (+)MAPPERmRatBN7.2
Rnor_6.0421,603,013 - 21,603,148NCBIRnor6.0
Rnor_6.0129,214,146 - 9,214,279NCBIRnor6.0
Rnor_5.01211,333,300 - 11,333,433UniSTSRnor5.0
Rnor_5.0421,535,195 - 21,535,330UniSTSRnor5.0
RGSC_v3.4422,160,538 - 22,160,673UniSTSRGSC3.4
RGSC_v3.4128,046,196 - 8,046,329UniSTSRGSC3.4
Celera129,218,170 - 9,218,303UniSTS
Celera420,152,579 - 20,152,714UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map12p11UniSTS
BE102139  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2424,617,350 - 24,617,507 (+)MAPPERmRatBN7.2
Rnor_6.0421,568,034 - 21,568,190NCBIRnor6.0
Rnor_5.0421,500,216 - 21,500,372UniSTSRnor5.0
RGSC_v3.4422,125,641 - 22,125,797UniSTSRGSC3.4
Celera420,117,595 - 20,117,751UniSTS
RH 3.4 Map4119.6UniSTS
Cytogenetic Map4q12UniSTS
BE115329  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2424,614,588 - 24,614,756 (+)MAPPERmRatBN7.2
Rnor_6.0421,565,274 - 21,565,441NCBIRnor6.0
Rnor_5.0421,497,456 - 21,497,623UniSTSRnor5.0
RGSC_v3.4422,122,881 - 22,123,048UniSTSRGSC3.4
Celera420,114,835 - 20,115,002UniSTS
RH 3.4 Map4119.1UniSTS
Cytogenetic Map4q12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 9 67 164 81 80 49 57 49 6 308 155 11 142 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000007723   ⟹   ENSRNOP00000007723
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl425,577,852 - 25,734,398 (-)Ensembl
mRatBN7.2 Ensembl424,633,619 - 24,722,798 (-)Ensembl
Rnor_6.0 Ensembl421,584,369 - 21,668,570 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000100645   ⟹   ENSRNOP00000092864
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl425,568,122 - 25,760,684 (-)Ensembl
mRatBN7.2 Ensembl424,613,163 - 24,805,729 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000113524   ⟹   ENSRNOP00000087058
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl425,570,785 - 25,760,684 (-)Ensembl
mRatBN7.2 Ensembl424,615,826 - 24,805,729 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000137551   ⟹   ENSRNOP00000103677
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl425,568,122 - 25,656,733 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000145109   ⟹   ENSRNOP00000100005
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl425,577,852 - 25,760,684 (-)Ensembl
RefSeq Acc Id: NM_001109345   ⟹   NP_001102815
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8425,568,122 - 25,760,684 (-)NCBI
mRatBN7.2424,613,163 - 24,805,729 (-)NCBI
Rnor_6.0421,563,848 - 21,757,668 (-)NCBI
Rnor_5.0421,496,030 - 21,689,391 (-)NCBI
RGSC_v3.4422,121,455 - 22,171,462 (-)RGD
Celera420,113,409 - 20,304,314 (-)RGD
Sequence:
RefSeq Acc Id: XM_039108238   ⟹   XP_038964166
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8425,565,298 - 25,760,465 (-)NCBI
mRatBN7.2424,613,193 - 24,805,493 (-)NCBI
RefSeq Acc Id: XM_063286607   ⟹   XP_063142677
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8425,577,851 - 25,760,668 (-)NCBI
RefSeq Acc Id: XM_063286608   ⟹   XP_063142678
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8425,615,072 - 25,760,668 (-)NCBI
RefSeq Acc Id: XR_010065695
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8425,565,298 - 25,760,668 (-)NCBI
RefSeq Acc Id: NP_001102815   ⟸   NM_001109345
- UniProtKB: A0A8I6AGD6 (UniProtKB/TrEMBL),   A6K224 (UniProtKB/TrEMBL),   F1M4B6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000007723   ⟸   ENSRNOT00000007723
RefSeq Acc Id: XP_038964166   ⟸   XM_039108238
- Peptide Label: isoform X2
- UniProtKB: F1M4B6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000092864   ⟸   ENSRNOT00000100645
Ensembl Acc Id: ENSRNOP00000087058   ⟸   ENSRNOT00000113524
RefSeq Acc Id: XP_063142677   ⟸   XM_063286607
- Peptide Label: isoform X1
- UniProtKB: F1M4B6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142678   ⟸   XM_063286608
- Peptide Label: isoform X3
Ensembl Acc Id: ENSRNOP00000100005   ⟸   ENSRNOT00000145109
Ensembl Acc Id: ENSRNOP00000103677   ⟸   ENSRNOT00000137551
Protein Domains
Elapor1-like galactose binding   MRH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1M4B6-F1-model_v2 AlphaFold F1M4B6 1-958 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1563349 AgrOrtholog
BioCyc Gene G2FUF-45850 BioCyc
Ensembl Genes ENSRNOG00000005818 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000007723.9 UniProtKB/TrEMBL
  ENSRNOT00000100645 ENTREZGENE
  ENSRNOT00000100645.2 UniProtKB/TrEMBL
  ENSRNOT00000113524.2 UniProtKB/TrEMBL
  ENSRNOT00000137551.1 UniProtKB/TrEMBL
  ENSRNOT00000145109 ENTREZGENE
  ENSRNOT00000145109.1 UniProtKB/TrEMBL
Gene3D-CATH Tumor Necrosis Factor Receptor, subunit A, domain 2 UniProtKB/TrEMBL
InterPro EIG121-like UniProtKB/TrEMBL
  Elapor1-like_3rd UniProtKB/TrEMBL
  Elapor1/2_C UniProtKB/TrEMBL
  Elapor1/2_GBD UniProtKB/TrEMBL
  Elapor1/2_MRH UniProtKB/TrEMBL
  Elapor1/2_TNFR-like UniProtKB/TrEMBL
  Growth_fac_rcpt_N_dom UniProtKB/TrEMBL
  Man6P_isomerase_rcpt-bd_dom_sf UniProtKB/TrEMBL
  MRH_dom UniProtKB/TrEMBL
KEGG Report rno:502727 UniProtKB/TrEMBL
NCBI Gene 502727 ENTREZGENE
PANTHER ENDOSOME/LYSOSOME-ASSOCIATED APOPTOSIS AND AUTOPHAGY REGULATOR FAMILY MEMBER 2 UniProtKB/TrEMBL
  PTHR22727 UniProtKB/TrEMBL
Pfam ELAPOR1_C UniProtKB/TrEMBL
  GBD_ELAPOR1 UniProtKB/TrEMBL
  GBD_ELAPOR1-like_3rd UniProtKB/TrEMBL
  MRH_ELAPOR1_9th UniProtKB/TrEMBL
  TNFR_ELAPOR1_6th UniProtKB/TrEMBL
PhenoGen Elapor2 PhenoGen
PROSITE MRH UniProtKB/TrEMBL
RatGTEx ENSRNOG00000005818 RatGTEx
SMART Ephrin_rec_like UniProtKB/TrEMBL
Superfamily-SCOP Grow_fac_recept UniProtKB/TrEMBL
  SSF50911 UniProtKB/TrEMBL
UniProt A0A8I6A6L2_RAT UniProtKB/TrEMBL
  A0A8I6AGD6 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L6R9_RAT UniProtKB/TrEMBL
  A0ABK0LJF8_RAT UniProtKB/TrEMBL
  A6K224 ENTREZGENE, UniProtKB/TrEMBL
  F1M4B6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-04-17 Elapor2  endosome-lysosome associated apoptosis and autophagy regulator family member 2  RGD1563349  similar to RIKEN cDNA 9330182L06  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1563349  similar to RIKEN cDNA 9330182L06   RGD1563349_predicted  similar to RIKEN cDNA 9330182L06 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1563349_predicted  similar to RIKEN cDNA 9330182L06 (predicted)  LOC502727  similar to RIKEN cDNA 9330182L06  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC502727  similar to RIKEN cDNA 9330182L06      Symbol and Name status set to provisional 70820 PROVISIONAL