Tmem65 (transmembrane protein 65) - Rat Genome Database

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Gene: Tmem65 (transmembrane protein 65) Rattus norvegicus
Analyze
Symbol: Tmem65
Name: transmembrane protein 65
RGD ID: 1563224
Description: Predicted to be involved in cardiac conduction; cardiac ventricle development; and regulation of cardiac conduction. Predicted to be located in intercalated disc; mitochondrial inner membrane; and plasma membrane. Predicted to be active in mitochondrion. Orthologous to human TMEM65 (transmembrane protein 65); INTERACTS WITH 2,3,7,8-Tetrachlorodibenzofuran; 3,3',5,5'-tetrabromobisphenol A; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: hypothetical protein LOC500874; LOC500874; RGD1563224; similar to 4930438D12Rik protein; uncharacterized protein LOC500874
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8792,163,632 - 92,268,430 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl792,163,635 - 92,268,214 (-)EnsemblGRCr8
mRatBN7.2790,336,997 - 90,378,930 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl790,274,142 - 90,379,474 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx792,226,577 - 92,267,565 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0794,427,858 - 94,468,726 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0794,252,518 - 94,293,603 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0798,668,589 - 98,709,613 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl798,605,722 - 98,709,649 (-)Ensemblrn6Rnor6.0
Rnor_5.0799,270,336 - 99,310,327 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4795,545,429 - 95,587,199 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera787,102,931 - 87,143,627 (-)NCBICelera
Cytogenetic Map7q33NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:18614015   PMID:24765583   PMID:26403541   PMID:28295037   PMID:34800366  


Genomics

Comparative Map Data
Tmem65
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8792,163,632 - 92,268,430 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl792,163,635 - 92,268,214 (-)EnsemblGRCr8
mRatBN7.2790,336,997 - 90,378,930 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl790,274,142 - 90,379,474 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx792,226,577 - 92,267,565 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0794,427,858 - 94,468,726 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0794,252,518 - 94,293,603 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0798,668,589 - 98,709,613 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl798,605,722 - 98,709,649 (-)Ensemblrn6Rnor6.0
Rnor_5.0799,270,336 - 99,310,327 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4795,545,429 - 95,587,199 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera787,102,931 - 87,143,627 (-)NCBICelera
Cytogenetic Map7q33NCBI
TMEM65
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388124,306,189 - 124,372,701 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8124,306,189 - 124,372,701 (-)Ensemblhg38GRCh38
GRCh378125,318,430 - 125,384,942 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368125,392,340 - 125,454,121 (-)NCBIBuild 36Build 36hg18NCBI36
Celera8121,511,293 - 121,573,166 (-)NCBICelera
Cytogenetic Map8q24.13NCBI
HuRef8120,650,408 - 120,670,285 (-)NCBIHuRef
CHM1_18125,363,524 - 125,425,289 (-)NCBICHM1_1
T2T-CHM13v2.08125,438,941 - 125,505,444 (-)NCBIT2T-CHM13v2.0
Tmem65
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391558,654,118 - 58,695,510 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1558,654,118 - 58,695,487 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381558,782,269 - 58,823,663 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1558,782,269 - 58,823,638 (-)Ensemblmm10GRCm38
MGSCv371558,613,824 - 58,654,982 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361558,612,352 - 58,653,510 (-)NCBIMGSCv36mm8
Celera1560,311,677 - 60,352,685 (-)NCBICelera
Cytogenetic Map15D1NCBI
cM Map1525.09NCBI
Tmem65
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555403,007,879 - 3,064,919 (-)Ensembl
ChiLan1.0NW_0049555403,006,776 - 3,064,938 (-)NCBIChiLan1.0ChiLan1.0
TMEM65
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27141,730,177 - 141,796,664 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18117,241,536 - 117,307,806 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08120,993,261 - 121,059,743 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18123,747,053 - 123,791,955 (-)NCBIPanPan1.1PanPan1.1panPan2
TMEM65
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11322,426,487 - 22,494,520 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1322,426,793 - 22,494,520 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1322,392,169 - 22,459,957 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01322,749,249 - 22,836,557 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
UMICH_Zoey_3.11322,475,985 - 22,556,509 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01322,579,557 - 22,666,788 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01322,822,017 - 22,909,339 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Tmem65
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530315,821,641 - 15,855,329 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647023,261,738 - 23,277,560 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647023,247,722 - 23,284,894 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM65
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl415,263,745 - 15,352,225 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1415,263,400 - 15,317,350 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2415,896,004 - 15,938,113 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM65
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18118,883,409 - 118,944,834 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603921,241,671 - 21,303,962 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem65
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473530,805,189 - 30,866,490 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473530,805,189 - 30,868,059 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Tmem65
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11233,305,537 - 233,349,520 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Tmem65
666 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:226
Count of miRNA genes:146
Interacting mature miRNAs:183
Transcripts:ENSRNOT00000064122
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)782111245123048330Rat
2317035Aia16Adjuvant induced arthritis QTL 162.71joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)771103011106126789Rat
1357336Gluco6Glucose level QTL 63.4blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)75170064396700643Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)731770293110435881Rat
1298525Cm1Cardiac mass QTL 12.7heart mass (VT:0007028)heart wet weight (CMO:0000069)756625161101625161Rat
1357338Stl17Serum triglyceride level QTL 173.23blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)771621154114982716Rat
70159Bp61Blood pressure QTL 610.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)773618702118618702Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)746307490127866166Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)785043242130043242Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)785497398130497398Rat
2317052Aia17Adjuvant induced arthritis QTL 172.13joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)783626689128626689Rat
631529Tls2T-lymphoma susceptibility QTL 200.001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)782111382132099989Rat
1300151Bp181Blood pressure QTL 1813.36arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)755498584105834451Rat
1559283Emca4Estrogen-induced mammary cancer QTL 43.7mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)763889858108889858Rat
1643004Pain2Pain QTL 21mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)71011291699900612Rat
738030Anxrr8Anxiety related response QTL 84.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)74847504993475049Rat
1300149Cm6Cardiac mass QTL 64.09heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)71104117804Rat
7411607Foco15Food consumption QTL 150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)777807807122807807Rat
631201Panci1Pancreas inflammation QTL 100.001pancreas integrity trait (VT:0010560)percentage of study population displaying chronic pancreatitis at a point in time (CMO:0001214)773557047118557047Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)71509236116977875Rat
1331768Kidm10Kidney mass QTL 104.62096kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)782111245123048330Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)740540077123682549Rat
1641908Teswt1Testicular weight QTL 13.28testis mass (VT:1000644)both testes wet weight (CMO:0000175)78211124596700643Rat
2316947Rf58Renal function QTL 587.8kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)749682832115766396Rat
10450862Kidm55Kidney mass QTL 554.9kidney mass (VT:0002707)kidney weight (CMO:0000081)772725037117725037Rat
724537Niddm52Non-insulin dependent diabetes mellitus QTL 520.02blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)78211124595485241Rat
1298528Bp169Blood pressure QTL 1690.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)762963207107963207Rat
1331746Kidm9Kidney mass QTL 93.934kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)782111245134948181Rat
1576303Ept7Estrogen-induced pituitary tumorigenesis QTL 73.7pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)763889858108889858Rat
10450856Livw4Liver weight QTL 43.8liver mass (VT:0003402)liver weight (CMO:0000092)772725037117725037Rat
7411654Foco25Food consumption QTL 259.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)777807807122807807Rat
2316955Stl24Serum triglyceride level QTL 247.1blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)749682832115766396Rat
10402855Bp379Blood pressure QTL 3790.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)778682549123682549Rat
2316952Pur22Proteinuria QTL 225.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)749682832115766396Rat
2303582Gluco53Glucose level QTL 533blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)74860308793603087Rat
631540Bw9Body weight QTL 94.5body mass (VT:0001259)body weight (CMO:0000012)771621154119349044Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)771827901136544683Rat

Markers in Region
RH137464  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2790,337,872 - 90,338,072 (+)MAPPERmRatBN7.2
Rnor_6.0798,668,833 - 98,669,032NCBIRnor6.0
Rnor_5.0799,270,580 - 99,270,779UniSTSRnor5.0
RGSC_v3.4795,545,673 - 95,545,872UniSTSRGSC3.4
Celera787,103,175 - 87,103,374UniSTS
Cytogenetic Map7q33UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 91 59 6 355 191 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000064122   ⟹   ENSRNOP00000063472
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl798,670,455 - 98,709,344 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000077440   ⟹   ENSRNOP00000074649
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl792,163,635 - 92,268,214 (-)Ensembl
mRatBN7.2 Ensembl790,274,142 - 90,378,733 (-)Ensembl
Rnor_6.0 Ensembl798,605,722 - 98,709,649 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000107015   ⟹   ENSRNOP00000093575
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl792,227,121 - 92,268,107 (-)Ensembl
mRatBN7.2 Ensembl790,337,433 - 90,379,474 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000113387   ⟹   ENSRNOP00000097891
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl792,227,121 - 92,268,107 (-)Ensembl
mRatBN7.2 Ensembl790,337,433 - 90,379,474 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000135355   ⟹   ENSRNOP00000105260
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl792,227,121 - 92,268,107 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000137110   ⟹   ENSRNOP00000100412
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl792,224,632 - 92,268,107 (-)Ensembl
RefSeq Acc Id: NM_001100995   ⟹   NP_001094465
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8792,227,113 - 92,268,178 (-)NCBI
mRatBN7.2790,337,629 - 90,378,697 (-)NCBI
Rnor_6.0798,668,589 - 98,709,613 (-)NCBI
Rnor_5.0799,270,336 - 99,310,327 (-)NCBI
RGSC_v3.4795,545,429 - 95,587,199 (-)RGD
Celera787,102,931 - 87,143,627 (-)RGD
Sequence:
RefSeq Acc Id: XM_039079755   ⟹   XP_038935683
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8792,226,483 - 92,268,430 (-)NCBI
mRatBN7.2790,336,997 - 90,378,910 (-)NCBI
RefSeq Acc Id: XM_063264121   ⟹   XP_063120191
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8792,163,632 - 92,268,408 (-)NCBI
RefSeq Acc Id: XM_063264122   ⟹   XP_063120192
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8792,226,483 - 92,241,324 (-)NCBI
RefSeq Acc Id: XM_063264123   ⟹   XP_063120193
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8792,163,632 - 92,268,401 (-)NCBI
RefSeq Acc Id: XR_005486706
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8792,234,349 - 92,268,409 (-)NCBI
mRatBN7.2790,344,875 - 90,378,930 (-)NCBI
RefSeq Acc Id: XR_005486707
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8792,234,349 - 92,268,402 (-)NCBI
mRatBN7.2790,344,877 - 90,378,928 (-)NCBI
RefSeq Acc Id: NP_001094465   ⟸   NM_001100995
- UniProtKB: A1L1L9 (UniProtKB/TrEMBL),   A6HRK7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000074649   ⟸   ENSRNOT00000077440
Ensembl Acc Id: ENSRNOP00000063472   ⟸   ENSRNOT00000064122
RefSeq Acc Id: XP_038935683   ⟸   XM_039079755
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000097891   ⟸   ENSRNOT00000113387
Ensembl Acc Id: ENSRNOP00000093575   ⟸   ENSRNOT00000107015
RefSeq Acc Id: XP_063120191   ⟸   XM_063264121
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063120193   ⟸   XM_063264123
- Peptide Label: isoform X4
- UniProtKB: B1WBL4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063120192   ⟸   XM_063264122
- Peptide Label: isoform X3
Ensembl Acc Id: ENSRNOP00000100412   ⟸   ENSRNOT00000137110
Ensembl Acc Id: ENSRNOP00000105260   ⟸   ENSRNOT00000135355

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LQZ0-F1-model_v2 AlphaFold F1LQZ0 1-259 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695357
Promoter ID:EPDNEW_R5875
Type:initiation region
Name:Tmem65_1
Description:transmembrane protein 65
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0798,709,661 - 98,709,721EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1563224 AgrOrtholog
BioCyc Gene G2FUF-33308 BioCyc
Ensembl Genes ENSRNOG00000008934 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000077440.3 UniProtKB/TrEMBL
  ENSRNOT00000107015 ENTREZGENE
  ENSRNOT00000107015.2 UniProtKB/TrEMBL
  ENSRNOT00000113387 ENTREZGENE
  ENSRNOT00000113387.2 UniProtKB/TrEMBL
  ENSRNOT00000135355.1 UniProtKB/TrEMBL
  ENSRNOT00000137110.1 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7190631 IMAGE-MGC_LOAD
InterPro Transmembrane_protein_65 UniProtKB/TrEMBL
KEGG Report rno:500874 UniProtKB/TrEMBL
MGC_CLONE MGC:156815 IMAGE-MGC_LOAD
NCBI Gene 500874 ENTREZGENE
PANTHER PTHR21706 UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN 65 UniProtKB/TrEMBL
Pfam DUF2453 UniProtKB/TrEMBL
PhenoGen Tmem65 PhenoGen
RatGTEx ENSRNOG00000008934 RatGTEx
UniProt A0A8I6AVM0 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0KZ79_RAT UniProtKB/TrEMBL
  A0ABK0L623_RAT UniProtKB/TrEMBL
  A1L1L9 ENTREZGENE, UniProtKB/TrEMBL
  A6HRK7 ENTREZGENE, UniProtKB/TrEMBL
  B1WBL4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-10-12 Tmem65  transmembrane protein 65  RGD1563224  similar to 4930438D12Rik protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1563224  similar to 4930438D12Rik protein   RGD1563224_predicted  similar to 4930438D12Rik protein (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1563224_predicted  similar to 4930438D12Rik protein (predicted)  LOC500874  similar to 4930438D12Rik protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC500874  similar to 4930438D12Rik protein      Symbol and Name status set to provisional 70820 PROVISIONAL