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Gene: Slx4ip (SLX4 interacting protein) Rattus norvegicus

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Symbol:

Slx4ip (Ensembl: AC132740.1)

Name:

SLX4 interacting protein

RGD ID:

1563120

Description:

Orthologous to human SLX4IP (SLX4 interacting protein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; atrazine; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC102549953; LOC499895; RGD1563120; similar to RIKEN cDNA 2210009G21; uncharacterized LOC102549953; uncharacterized protein LOC499895

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLX4IP (SLX4 interacting protein)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Slx4ip (SLX4 interacting protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slx4ip (SLX4 interacting protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLX4IP (SLX4 interacting protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLX4IP (SLX4 interacting protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slx4ip (SLX4 interacting protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLX4IP (SLX4 interacting protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLX4IP (SLX4 interacting protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slx4ip (SLX4 interacting protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Slx4ip (SLX4 interacting protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	SLX4IP (SLX4 interacting protein)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slx4ip (SLX4 interacting protein)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slx4ip (SLX4 interacting protein)	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slx4ip (SLX4 interacting protein)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	slx4ip	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	144,672,898 - 144,849,468 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	144,673,857 - 144,849,465 (+)	Ensembl				GRCr8
GRCr8 Ensembl	8	72,671,792 - 72,672,913 (+)	Ensembl				GRCr8
mRatBN7.2	3	124,220,215 - 124,396,797 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	124,221,198 - 124,396,797 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	128,107,533 - 128,280,405 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	136,684,517 - 136,857,387 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	134,369,355 - 134,543,383 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	129,884,871 - 130,069,371 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	129,885,826 - 130,069,390 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	136,489,186 - 136,545,079 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	125,104,880 - 125,167,452 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	122,940,057 - 123,112,478 (+)	NCBI		Celera
Cytogenetic Map	3	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

congenital myasthenic syndrome 18 (ISO)

developmental and epileptic encephalopathy 12 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

aflatoxin B1 (ISO)

amiodarone (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

Benzo[k]fluoranthene (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (EXP)

carbon nanotube (ISO)

chlorpyrifos (ISO)

epoxiconazole (ISO)

ethanol (ISO)

FR900359 (ISO)

gentamycin (EXP)

indole-3-methanol (EXP)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methapyrilene (ISO)

nickel sulfate (ISO)

ozone (ISO)

potassium chromate (ISO)

quercetin (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

thioacetamide (EXP)

thiram (ISO)

triptonide (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

retrotransposition (IBA,IEA)

Cellular Component

cytoplasm (IEA)

cytoplasmic stress granule (IEA)

nucleolus (IEA)

ribonucleoprotein complex (IBA)

Molecular Function

nucleotide binding (IEA)

protein binding (ISO)

single-stranded RNA binding (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Slx4ip
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	144,672,898 - 144,849,468 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	144,673,857 - 144,849,465 (+)	Ensembl				GRCr8
GRCr8 Ensembl	8	72,671,792 - 72,672,913 (+)	Ensembl				GRCr8
mRatBN7.2	3	124,220,215 - 124,396,797 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	124,221,198 - 124,396,797 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	128,107,533 - 128,280,405 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	136,684,517 - 136,857,387 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	134,369,355 - 134,543,383 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	129,884,871 - 130,069,371 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	129,885,826 - 130,069,390 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	136,489,186 - 136,545,079 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	125,104,880 - 125,167,452 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	122,940,057 - 123,112,478 (+)	NCBI		Celera
Cytogenetic Map	3	q36	NCBI

SLX4IP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	10,435,305 - 10,628,030 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	10,435,299 - 10,636,829 (+)	Ensembl			hg38	GRCh38
GRCh37	20	10,415,953 - 10,608,678 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	10,363,951 - 10,552,027 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	20	10,485,945 - 10,674,022 (+)	NCBI		Celera
Cytogenetic Map	20	p12.2	NCBI
HuRef	20	10,367,720 - 10,555,487 (+)	NCBI		HuRef
CHM1_1	20	10,416,507 - 10,604,563 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	20	10,478,114 - 10,671,152 (+)	NCBI		T2T-CHM13v2.0

Slx4ip
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	136,733,138 - 136,923,273 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	136,733,138 - 136,913,870 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	136,891,213 - 137,081,351 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	136,891,218 - 137,071,950 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	136,716,954 - 136,895,514 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	136,582,659 - 136,761,219 (+)	NCBI		MGSCv36	mm8
Celera	2	138,082,793 - 138,261,593 (+)	NCBI		Celera
Cytogenetic Map	2	F3	NCBI
cM Map	2	67.65	NCBI

Slx4ip
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955415	20,394,192 - 20,481,249 (+)	Ensembl
ChiLan1.0	NW_004955415	20,316,664 - 20,478,786 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLX4IP
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	11,305,565 - 11,498,876 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	11,302,285 - 11,495,706 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	10,380,226 - 10,570,766 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	10,381,239 - 10,570,472 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	10,381,239 - 10,572,296 (+)	Ensembl			panPan2	panpan1.1

SLX4IP
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	11,702,955 - 11,886,664 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	11,706,776 - 11,772,030 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	11,522,004 - 11,706,509 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	12,113,673 - 12,298,402 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	12,117,495 - 12,182,883 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	11,721,338 - 11,905,871 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	11,820,563 - 12,005,032 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	12,163,320 - 12,347,977 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Slx4ip
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	160,472,589 - 160,657,608 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936485	8,903,951 - 9,088,613 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936485	8,907,153 - 9,088,595 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLX4IP
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	17	19,363,727 - 19,578,132 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	21,836,880 - 22,048,255 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLX4IP
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	27,530,833 - 27,727,480 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	27,535,125 - 27,602,793 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666071	16,852,392 - 17,065,833 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slx4ip
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624741	11,463,963 - 11,633,632 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624741	11,447,398 - 11,638,083 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Slx4ip
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	116,481,356 - 116,652,325 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Slx4ip
1084 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	132
Count of miRNA genes:	56
Interacting mature miRNAs:	61
Transcripts:	ENSRNOT00000009743, ENSRNOT00000070972
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2301411	Bp320	Blood pressure QTL 320		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	141555229	186555229	Rat
12879876	Bw182	Body weight QTL 182		0.003	body mass (VT:0001259)	body weight (CMO:0000012)	3	141555229	186555229	Rat
1582233	Insul10	Insulin level QTL 10	5.4	0.0015	blood insulin amount (VT:0001560)	serum insulin level times blood glucose level (CMO:0002040)	3	133259579	178259579	Rat
12879872	Cm97	Cardiac mass QTL 97		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	141555229	186555229	Rat
12879873	Cm96	Cardiac mass QTL 96		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	141555229	186555229	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	129154923	182114333	Rat
12879874	Cm98	Cardiac mass QTL 98		0.005	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	141555229	186555229	Rat
12879875	Kidm64	Kidney mass QTL 64		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	141555229	186555229	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	67641776	167835660	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	58601291	153936591	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	133134628	178134628	Rat
7387306	Bw124	Body weight QTL 124	3.2	0.0003	body mass (VT:0001259)	body weight (CMO:0000012)	3	104545086	149545086	Rat
1300173	Rf11	Renal function QTL 11	3.38		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	141508991	166376254	Rat
8694437	Bw167	Body weight QTL 167	22.46	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	3	112250810	157250810	Rat
10755461	Coatc16	Coat color QTL 16			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	3	142898802	187898802	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
1354611	Despr2	Despair related QTL 2	3.03	0.0028	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	3	117537367	162537367	Rat
2303620	Vencon4	Ventilatory control QTL 4	3.9		respiration trait (VT:0001943)	tidal volume (CMO:0000222)	3	125116475	170116475	Rat
631649	Bp123	Blood pressure QTL 123	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	110225882	155225882	Rat
1358204	Insglur1	Insulin/glucose ratio QTL 1	3.8		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	3	136091420	155634702	Rat
1576306	Schws3	Schwannoma susceptibility QTL 3		0.001	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	3	139299381	184299381	Rat
1300159	Kidm4	Kidney mass QTL 4	3.83		kidney mass (VT:0002707)	right kidney wet weight to body weight ratio (CMO:0001953)	3	141508991	177728348	Rat
5686842	Rf59	Renal function QTL 59			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	3	122395989	167395989	Rat
631673	Iddm13	Insulin dependent diabetes mellitus QTL 13	1.3	0.663	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	3	137114333	182114333	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	131036586	176036586	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	131036586	176036586	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	98651826	167012663	Rat
1331758	Bp207	Blood pressure QTL 207	2.848		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	110634702	155634702	Rat
12879871	Am7	Aortic mass QTL 7		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	141555229	186555229	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	144575244	189428310	Rat
724532	Cm17	Cardiac mass QTL 17	2		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	3	116188400	161188400	Rat

Markers in Region

D3Rat155

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	124,224,041 - 124,224,285 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	129,888,699 - 129,888,942	NCBI	Rnor6.0
Rnor_5.0	3	136,369,704 - 136,369,947	UniSTS	Rnor5.0
RGSC_v3.4	3	124,997,255 - 124,997,499	RGD	RGSC3.4
RGSC_v3.4	3	124,997,256 - 124,997,499	UniSTS	RGSC3.4
Celera	3	122,942,930 - 122,943,173	UniSTS
RGSC_v3.1	3	124,902,828 - 124,903,072	RGD
SHRSP x BN Map	3	61.9098	RGD
SHRSP x BN Map	3	61.9098	UniSTS
Cytogenetic Map	3	q36	UniSTS

D3Rat154

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	3	144,739,217 - 144,739,363 (+)	Marker Load Pipeline
mRatBN7.2	3	124,286,544 - 124,286,690 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	129,958,906 - 129,959,051	NCBI	Rnor6.0
Rnor_5.0	3	136,438,243 - 136,438,388	UniSTS	Rnor5.0
RGSC_v3.4	3	125,060,606 - 125,060,752	RGD	RGSC3.4
RGSC_v3.4	3	125,060,607 - 125,060,752	UniSTS	RGSC3.4
Celera	3	123,006,328 - 123,006,475	UniSTS
RGSC_v3.1	3	124,966,179 - 124,966,325	RGD
SHRSP x BN Map	3	61.9098	UniSTS
SHRSP x BN Map	3	61.9098	RGD
Cytogenetic Map	3	q36	UniSTS

AU047409

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	124,290,656 - 124,290,926 (+)	MAPPER	mRatBN7.2
mRatBN7.2	18	42,910,533 - 42,911,501 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	43,953,969 - 43,954,936	NCBI	Rnor6.0
Rnor_6.0	3	129,963,018 - 129,963,287	NCBI	Rnor6.0
Rnor_5.0	14	46,165,543 - 46,166,510	UniSTS	Rnor5.0
Rnor_5.0	3	136,442,355 - 136,442,624	UniSTS	Rnor5.0
RGSC_v3.4	3	125,064,719 - 125,064,988	UniSTS	RGSC3.4
RGSC_v3.4	18	44,727,393 - 44,728,360	UniSTS	RGSC3.4
Celera	18	41,139,257 - 41,140,224	UniSTS
Celera	3	123,010,442 - 123,010,711	UniSTS
Cytogenetic Map	3	q36	UniSTS
Cytogenetic Map	14	p11	UniSTS

BE096454

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	124,326,183 - 124,326,351 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	129,998,811 - 129,998,978	NCBI	Rnor6.0
Rnor_5.0	3	136,478,148 - 136,478,315	UniSTS	Rnor5.0
RGSC_v3.4	3	125,100,435 - 125,100,602	UniSTS	RGSC3.4
Celera	3	123,045,938 - 123,046,105	UniSTS
RH 3.4 Map	3	1087.8	UniSTS
Cytogenetic Map	3	q36	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	92	59	6	356	192	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001271320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762255	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762256	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762257	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762259	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762260	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762261	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591988	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105701	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284381	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284382	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284383	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284384	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284385	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000009743 ⟹ ENSRNOP00000009743

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	3	129,885,826 - 130,065,752 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000070972 ⟹ ENSRNOP00000065685

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	144,673,857 - 144,849,465 (+)	Ensembl
mRatBN7.2 Ensembl	3	124,221,198 - 124,396,797 (+)	Ensembl
Rnor_6.0 Ensembl	3	130,008,885 - 130,069,390 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109869 ⟹ ENSRNOP00000087503

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	144,776,198 - 144,849,465 (+)	Ensembl
mRatBN7.2 Ensembl	3	124,364,405 - 124,396,797 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118214 ⟹ ENSRNOP00000086516

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	144,673,857 - 144,849,465 (+)	Ensembl
mRatBN7.2 Ensembl	3	124,221,198 - 124,396,797 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000136744 ⟹ ENSRNOP00000112579

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	144,817,412 - 144,849,465 (+)	Ensembl

RefSeq Acc Id:

NM_001271320 ⟹ NP_001258249

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	144,673,847 - 144,845,849 (+)	NCBI
mRatBN7.2	3	124,221,169 - 124,393,178 (+)	NCBI
Rnor_6.0	3	129,885,826 - 130,065,752 (+)	NCBI
Rnor_5.0	3	136,489,186 - 136,545,079 (+)	NCBI
Celera	3	122,940,057 - 123,112,478 (+)	NCBI

Sequence:

show sequence

GGACACTGGGAAACAGGAAGTAGGCCAAAGCTTCTGAAGCTTGGCCCGCCGCCTTTTAGTCTGA
GTTTTCACATCCAGGTGCTAGTCCACCAGTGACCCTGGACAGTAATAACACATATAAAGCCCGA
ACCCACCTCCTGCCACCATAGGTTCCGTACCTCATGTGGAAATCAGTAAATCATGGCATCTAAG
AAATTTGTCATCAAATGCGGGAACTTTGCAGTCCTGGTGGATCTTCATGTATTGCCACAAGGTT
CAAACAAAGATTCCAGTTGGTTTTCTGAACAGAAGAAAGAGGAAGTTTGTTTGCTGTTAAAAGA
AACCATTGATTCCAGAGTTAAGGAGTACGTGGGCATTTATAAGCAGCACAGGCCATCAACTGCA
GAATTCTCAAGATCCAGTCCCTTGTCCTTAAAAGGCTATGGCTTTCAGATCACAGCTTATTTCA
TCAGGAGAGGGATACACCTTCGCTGTATCCAGAGCTCCCGGAATACAGAACTTCGTATATTTCC
TGAGAGCTTTGTGGTGTGTGTTAGTCAGCTTGCATTTGGTCATGATACTTGGGCAAACCAGAAT
GAAAAGTCGACACAAAGAGCCCTCCATGGAGCGTCTGATTACTTTGCCCAGTGTGCGGAGAGTT
CACCTCCTCCTGGCATAAAGCTCAAGAGGAACACGCTGAAGGAAATTGTGAGAAGAGCTGAATC
AAAAGGCACTGATGTGAGCAAACCACAGACCAGCAGGGACCTTGTGGGAAAATCTAGTGACTCA
GTAATTACCGTGGTACCACGGAGGAGGGATGCCTCAGCCATTCTCCTGTCAGAACCTGTGGGTC
AAGCACAAGATGACATAAGAGCAGCCAAGAGCCACCAGGAGCTTCCTGTTCAAAAGCTGGAAAA
TGTCTCTCAGACTCAGCCAGGAGACACTCGCAGCCAGCAGCAACTTCATCCTGGGGAGTGGTTA
AAGACAGGGCTTCTAAGCAGGAGCCCTGTGTATAACTATGAGTCAGCATCGCCAGGTCCAAAGC
AAAGTCCACGAGCAGCCAAGACACAGCAGAAACGCAGGAATTGTGGCTCTGTGGAAGACTCTGA
CCACCGCAGGAGAGTTTCTCTTGGAAATGAAGGATTAGTCCCGGAGGACTCAGTGGTGGAAACG
AGCACAGCTGTCAGGGTTTTGCCAGCCTTAGAGTTGTCAAATCCTGGGTTGCTTTTGAAACAAG
ATTTGGCAAAAGCCACAGCTAAAGAAGAGCTGCATGCTTTGGAAAACCTCTCCTCCAGACATCT
TGTGACAGACAACCCAGGGCAGGCGCGGCCAACTGGCTCAGCCACAGTCACTGAAAGATTAGCT
CCAGTTCAGAGCGGCCCCAGCAAGAAAAGAAAGAAACTGCAAAGTTCCAGCAGAGGATGTAGTG
GCAAGAAAAGCTGA

hide sequence

RefSeq Acc Id:

XM_008762255 ⟹ XP_008760477

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	144,672,899 - 144,849,468 (+)	NCBI
mRatBN7.2	3	124,220,221 - 124,396,797 (+)	NCBI
Rnor_6.0	3	129,884,931 - 130,069,371 (+)	NCBI

Sequence:

show sequence

AAACTACCAAAACGGAAAAGGTATAAAAACACATCACAGCGCCAAGAAGGCGACAGAGCTTGCG
GCTCTCTGCTCTCTCAAAAGGTTCCGTACCTCATGTGGAAATCAGTAAATCATGGCATCTAAGA
AATTTGTCATCAAATGCGGGAACTTTGCAGTCCTGGTGGATCTTCATGTATTGCCACAAGGTTC
AAACAAAGATTCCAGTTGGTTTTCTGAACAGAAGAAAGAGGAAGTTTGTTTGCTGTTAAAAGAA
ACCATTGATTCCAGAGTTAAGGAGTACGTGGGCATTTATAAGCAGCACAGGCCATCAACTGCAG
AATTCTCAAGATCCAGTCCCTTGTCCTTAAAAGGCTATGGCTTTCAGATCACAGCTTATTTCAT
CAGGAGAGGGATACACCTTCGCTGTATCCAGAGCTCCCGGAATACAGAACTTCGTATATTTCCT
GAGAGCTTTGTGGTGTGTGTTAGTCAGCTTGCATTTGGTCATGATACTTGGGCAAACCAGAATG
AAAAGTCGACACAAAGAGCCCTCCATGGAGCGTCTGATTACTTTGCCCAGTGTGCGGAGAGTTC
ACCTCCTCCTGGCATAAAGCTCAAGAGGAACACGCTGAAGGAAATTGTGAGAAGAGCTGAATCA
AAAGGCACTGATGTGAGCAAACCACAGACCAGCAGGGACCTTGTGGGAAAATCTAGTGACTCAG
TAATTACCGTGGTACCACGGAGGAGGGATGCCTCAGCCATTCTCCTGTCAGAACCTGTGGGTCA
AGCACAAGATGACATAAGAGCAGCCAAGAGCCACCAGGAGCTTCCTGTTCAAAAGCTGGAAAAT
GTCTCTCAGACTCAGCCAGGAGACACTCGCAGCCAGCAGCAACTTCATCCTGGGGAGTGGTTAA
AGACAGGGCTTCTAAGCAGGAGCCCTGTGTATAACTATGAGTCAGCATCGCCAGGTCCAAAGCA
AAGTCCACGAGCAGCCAAGACACAGCAGAAACGCAGGAATTGTGGCTCTGTGGAAGACTCTGAC
CACCGCAGGAGAGTTTCTCTTGGAAATGAAGGATTAGTCCCGGAGGACTCAGTGGTGGAAACGA
GCACAGCTGTCAGGGTTTTGCCAGCCTTAGAGTTGTCAAATCCTGGGTTGCTTTTGAAACAAGA
TTTGGCAAAAGCCACAGCTAAAGAAGAGCTGCATGCTTTGGAAAACCTCTCCTCCAGACATCTT
GTGACAGACAACCCAGGGCAGGCGCGGCCAACTGGCTCAGCCACAGTCACTGAAAGATTAGCTC
CAGTTCAGAGCGGCCCCAGCAAGAAAAGAAAGAAACTGCAAAGTTCCAGCAGAGGATGTAGTGG
CAAGAAAAGCTGAGTATACAGTACCTGGGGTTTGGAAGGAATTAGGGTGATTACTTTAAATAAA
CAAATATTTAGGAGCTGGAGTTATGTCTCAGCTTTTAATCTTGCAGAGGACCCAGATTAGGTTC
CAGGAACCTACAGGGTTACTCATAACCATCCCGAACTCCAGATCCAGAAGACCCAACACCATTT
TTGACTTCCATGGGCACCGGGCATGCGCATGGTGTGCATAAATACCAGGAAAACACACATACAT
GTAAATCTTTTGGTAAAATTGTTTGTATTGGAATTGGCCTTCATAGTCACCTCCTGGAGGCTGT
TTTCCTAACAAGCTTGTTACTTTCTTATCATATTTATAACTGTCTCCAGGAAATACATTGACAA
AGAGCTTTCCACTGATCAAGGAGTAAACCATATATCTAGGACCCCATGGAGAAATCAGTAATGG
TGGCCTCCTCAGCCCATCTCTATGAAGACCTTCTGATGGAAGAGAGAGACAGCGTCAGGTACCA
CAGGCCAGTTCTAGGGCTGCAGTCCTCTTGTTTCTCAAACTGAGTACCTGACAGGAAAAGTCGG
TCACAGTCTCTGCATGTGGTTCTGTGAGGAATGCAAGTATTGGGGTCTCAGGGCCTATGGAATG
AGGAACTGTGATTCTGAAATAGACTAACGTTAAAAACAATTCCCTAGAACTTACTTGCTACGGC
CCAGTTACCATGGCTTACATCAGCTGGGGTCACACGTGGAAATGCACACCCCGTGCTTTCTTCA
GACTTGTGAAGTATTTAGATTGGATTTGGTGTGTGAGTCACTCTGTTCCCAGGTTCTACTATAG
GATGGACACAATGCCTAAGGAGCTGATACATCTGCAGTTGCCAGAGATGTGTGGGTAATTCATC
AGTCTTGGGTGAAGACAGGGAAGAGCTGTGCTCTCTGTAACACAAGTTTAACCCTGTCCTTGTT
TACACCTCCCATATTCTGCTTACAGTTAAGACAGACCAGAACTCAAACAAGCTCAGTGGCCATT
CCAGTTCCCAATTTGGAAAAATTCCCAGGGTATTTAAATGTCCTCTTCAGTTGTGTAGCCAACT
CTCAAGAAAGACAGGAAGTTGTCAACCTGGAAGTTTCATCTGCCACCCCAACCTCAAGGCTCTC
ACAGCTACTTGCTGGTACCCCTCCCCTTCCCCACCTAGCTCTTCTCTTCTTTTTCCTCCTTGAA
AGCTAAGATGTCGTGTCCCCCATGGAAGCATGAGGAGCCCCCATTGTACACCAAGAAGCAGCTC
ACTCGGAGACCAGAGGGTGCTTCCCTTTCCAGAGCGAAGATATTCTGACCTAGAATACACTGGG
TTTTAATTGTTTAATGCTTAAGGTCGTATGCTATGCTGTACTGTACTTACAAAGGATGTGCTTT
CAAGAAGTGTTTTCATTTTCAGTGTGTTCTATTATATTATAGGAAATAGTGGTTATTGTGACCA
ATGATTTAAAAAAATAGTATGTTAGAGTTGTAGATAAATGTGACCTTTGTCACAGCCTTCATAC
ACAAAGAATTTTAACAGGATTAACAGAGCTCTGGGCTCCCACATTCTGCCATATGTTTAAGGAA
TTTTTGCCCTTAATCATTTTCCTACAGCATGTTTGAAACACCTCTCCATCTCTTGTTTTTTGAA
TGGTTTTACAATTCTTTGAATATATGGATAAAGAGGGGAAATTAATCTCAAATGTTTTGTTACT
TATCAGGTGGGGCATTAAGCATTGTCTACTGTTGGGAATCGTATGAGTTTTTATATCCTTAATT
ACTCTAACAATTTGGCATTTGAAAGTGCGAGGCAGTGTCAGGATTGATAGTCAAAACGAAGTTC
TTCAATCCTTTGATCCTCCAAATTAAATGTATATTCGGGTCCCTGTGATTCTGATACTTGGAGG
AAATGTTCATCCACTTCCACTGATAACTAAACTCAAGGCTTTTCTCATTATCTGAGATGCTAAG
CCACCTCCATGTACTATCAAACGACATTTTAGTAGATGAAAGCTGGTTAGGCCTTTCTCTAATT
TCTTTCTTTCTCCCTTCTCCCCCAATTTAAAAACATGGAAAAGCTGGCCTGGTGGCAGACGCCT
TTAATCCTAGCTCTTGGGAGGCAGAGGCAGGGAGCTCTCTCAGTTAGAGACCAGACTGGTCTAC
ATAATAAGTTTCCAGACAGTCAGAGGTATATAGTAAGACCTTGTCTTAAAACAGACGAACAAAT
CAGTATGGGAATAATCGTGATTTTTCTTGCACACTTACTTTTCTTTGCCACTGGAGGTTAGCTC
ACTGGGAGACATGCATATGACTTGTGAACTGCAGAGAGGAACTTGGTGCTGGAATAGCTATGGG
GTGTTGTTCCCTTATTTTATGCTAAAGAAGTGTGAAAATGTATTTATTTTTTTAAAACAAGACT
CATGGGCCATTCATTGGTGAAAGGAGTGTTTTGCATGTGTAGTGATCGCTAAGACACCAGTAAG
AAAGAAGAAGACACAAAAGTCTCTGTATTTTAATGTTTGAAGAATGTAGTTTATCTCGGGATGG
ACCTTCTCAAAGTGTACCTTGGGGTATCAGTATAATTAATTGTTTTGATTTCACTAGTGATTGT
ACATGTCATTGGCCTTTGACTTCAGAAAGAAAAAAAAAAACCCAACTAGGGCAGACACATAGGG
AAGGAAACATCTTTGCCCAAGAGAGTGATCTAGGATCAGTGTCAGGCTTCATGGTTTTTTTTAA
GCTCCTTGGCAGGTCTCACTGTAATATTTCCACAAAACGGTAGTGAATGGCCCTCTGAATAATA
AGCAACTTTTCAAGAGCCAAAGCATGCGGTGTGCAGCATGCTGGGACTGGAATATGGAAATTGT
TTTAATTTCTTCTTTTCTCTTATGAGGAAGTCACTGCACTTGGTTTGTCCAGACAAGAGAGTTC
ATCCCCTGTATCGAAACAGTGATGAATCAAAACATGTTGGAGCAAGTTTTAAAAAATCAAAATT
AAACTGGTTTCTCTTAAATAGCTTAAAGCTTTCCACAGTACAAAATAAATTAAGCATTGTAAAA
TGAAATTAATTCAAGTAATCACTCAGTACAGAAGTCTAAGCATATATATCATCAGTCTTGTAAT
TCCAGGGTATAATTAAATTCTCAGAAATCTGCTAAATTCCTCCTAATTTGGTTTCTATATACAT
TTAACAAGACAGAGAGCAAATGTTTGTTAATCTGTAGCATGCCAAAGAGAATGTGGGTGAAGTT
GTCTTCTAATTGCGGGGGCCTTTCAGACTGGGCTTGAAATGTGTCTGGGTAAGGCTCATCTGTA
GCACCTTATCCCCACACTACATTAAAGTTTCCATAACCATTCTGACCAGAGACTGAATTTTTGT
TTATTGAAGTAAAATCAGTAAAACTATGCAATTGCCTCTGACTGGTGCTAATAGGTGCTAATTT
GGCAGATTCTCAGACTGACTTTCAAGGTGGAATTAGATACTACCAAAATCTCCAGGAGAGCTCT
GGTCCTCTCATGTAAGTACCTTTAATAAACTCAATGTCCACAGAATAAAACCACTTTTGTAATG
AAAATGTACCTGTTCCATGAATAAATATTTGGATTTTGTGAATTTAAA

hide sequence

RefSeq Acc Id:

XM_008762256 ⟹ XP_008760478

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	144,673,823 - 144,849,468 (+)	NCBI
mRatBN7.2	3	124,221,136 - 124,396,797 (+)	NCBI
Rnor_6.0	3	129,885,841 - 130,069,371 (+)	NCBI

Sequence:

show sequence

GGAAGTAGGCCAAAGCTTCTGAAGCTTGGCCCGCCGCCTTTTAGTCTGAGTTTTCACATCCAGG
TGCTAGTCCACCAGTGACCCTGGACAGTAATAACACATATAAAGCCCGAACCCACCTCCTGCCA
CCATAGTTTTTTCTTTCGTGGTACTGCAGATTGAAGTCAGGGTTTGGTGCCTCTTAGGCAGGAG
CTTCACAGACTCTTCAGCCAGTTTGAATTGCTGACAGCCATCAGTATGTTCCGTACCTCATGTG
GAAATCAGTAAATCATGGCATCTAAGAAATTTGTCATCAAATGCGGGAACTTTGCAGTCCTGGT
GGATCTTCATGTATTGCCACAAGGTTCAAACAAAGATTCCAGTTGGTTTTCTGAACAGAAGAAA
GAGGAAGTTTGTTTGCTGTTAAAAGAAACCATTGATTCCAGAGTTAAGGAGTACGTGGGCATTT
ATAAGCAGCACAGGCCATCAACTGCAGAATTCTCAAGATCCAGTCCCTTGTCCTTAAAAGGCTA
TGGCTTTCAGATCACAGCTTATTTCATCAGGAGAGGGATACACCTTCGCTGTATCCAGAGCTCC
CGGAATACAGAACTTCGTATATTTCCTGAGAGCTTTGTGGTGTGTGTTAGTCAGCTTGCATTTG
GTCATGATACTTGGGCAAACCAGAATGAAAAGTCGACACAAAGAGCCCTCCATGGAGCGTCTGA
TTACTTTGCCCAGTGTGCGGAGAGTTCACCTCCTCCTGGCATAAAGCTCAAGAGGAACACGCTG
AAGGAAATTGTGAGAAGAGCTGAATCAAAAGGCACTGATGTGAGCAAACCACAGACCAGCAGGG
ACCTTGTGGGAAAATCTAGTGACTCAGTAATTACCGTGGTACCACGGAGGAGGGATGCCTCAGC
CATTCTCCTGTCAGAACCTGTGGGTCAAGCACAAGATGACATAAGAGCAGCCAAGAGCCACCAG
GAGCTTCCTGTTCAAAAGCTGGAAAATGTCTCTCAGACTCAGCCAGGAGACACTCGCAGCCAGC
AGCAACTTCATCCTGGGGAGTGGTTAAAGACAGGGCTTCTAAGCAGGAGCCCTGTGTATAACTA
TGAGTCAGCATCGCCAGGTCCAAAGCAAAGTCCACGAGCAGCCAAGACACAGCAGAAACGCAGG
AATTGTGGCTCTGTGGAAGACTCTGACCACCGCAGGAGAGTTTCTCTTGGAAATGAAGGATTAG
TCCCGGAGGACTCAGTGGTGGAAACGAGCACAGCTGTCAGGGTTTTGCCAGCCTTAGAGTTGTC
AAATCCTGGGTTGCTTTTGAAACAAGATTTGGCAAAAGCCACAGCTAAAGAAGAGCTGCATGCT
TTGGAAAACCTCTCCTCCAGACATCTTGTGACAGACAACCCAGGGCAGGCGCGGCCAACTGGCT
CAGCCACAGTCACTGAAAGATTAGCTCCAGTTCAGAGCGGCCCCAGCAAGAAAAGAAAGAAACT
GCAAAGTTCCAGCAGAGGATGTAGTGGCAAGAAAAGCTGAGTATACAGTACCTGGGGTTTGGAA
GGAATTAGGGTGATTACTTTAAATAAACAAATATTTAGGAGCTGGAGTTATGTCTCAGCTTTTA
ATCTTGCAGAGGACCCAGATTAGGTTCCAGGAACCTACAGGGTTACTCATAACCATCCCGAACT
CCAGATCCAGAAGACCCAACACCATTTTTGACTTCCATGGGCACCGGGCATGCGCATGGTGTGC
ATAAATACCAGGAAAACACACATACATGTAAATCTTTTGGTAAAATTGTTTGTATTGGAATTGG
CCTTCATAGTCACCTCCTGGAGGCTGTTTTCCTAACAAGCTTGTTACTTTCTTATCATATTTAT
AACTGTCTCCAGGAAATACATTGACAAAGAGCTTTCCACTGATCAAGGAGTAAACCATATATCT
AGGACCCCATGGAGAAATCAGTAATGGTGGCCTCCTCAGCCCATCTCTATGAAGACCTTCTGAT
GGAAGAGAGAGACAGCGTCAGGTACCACAGGCCAGTTCTAGGGCTGCAGTCCTCTTGTTTCTCA
AACTGAGTACCTGACAGGAAAAGTCGGTCACAGTCTCTGCATGTGGTTCTGTGAGGAATGCAAG
TATTGGGGTCTCAGGGCCTATGGAATGAGGAACTGTGATTCTGAAATAGACTAACGTTAAAAAC
AATTCCCTAGAACTTACTTGCTACGGCCCAGTTACCATGGCTTACATCAGCTGGGGTCACACGT
GGAAATGCACACCCCGTGCTTTCTTCAGACTTGTGAAGTATTTAGATTGGATTTGGTGTGTGAG
TCACTCTGTTCCCAGGTTCTACTATAGGATGGACACAATGCCTAAGGAGCTGATACATCTGCAG
TTGCCAGAGATGTGTGGGTAATTCATCAGTCTTGGGTGAAGACAGGGAAGAGCTGTGCTCTCTG
TAACACAAGTTTAACCCTGTCCTTGTTTACACCTCCCATATTCTGCTTACAGTTAAGACAGACC
AGAACTCAAACAAGCTCAGTGGCCATTCCAGTTCCCAATTTGGAAAAATTCCCAGGGTATTTAA
ATGTCCTCTTCAGTTGTGTAGCCAACTCTCAAGAAAGACAGGAAGTTGTCAACCTGGAAGTTTC
ATCTGCCACCCCAACCTCAAGGCTCTCACAGCTACTTGCTGGTACCCCTCCCCTTCCCCACCTA
GCTCTTCTCTTCTTTTTCCTCCTTGAAAGCTAAGATGTCGTGTCCCCCATGGAAGCATGAGGAG
CCCCCATTGTACACCAAGAAGCAGCTCACTCGGAGACCAGAGGGTGCTTCCCTTTCCAGAGCGA
AGATATTCTGACCTAGAATACACTGGGTTTTAATTGTTTAATGCTTAAGGTCGTATGCTATGCT
GTACTGTACTTACAAAGGATGTGCTTTCAAGAAGTGTTTTCATTTTCAGTGTGTTCTATTATAT
TATAGGAAATAGTGGTTATTGTGACCAATGATTTAAAAAAATAGTATGTTAGAGTTGTAGATAA
ATGTGACCTTTGTCACAGCCTTCATACACAAAGAATTTTAACAGGATTAACAGAGCTCTGGGCT
CCCACATTCTGCCATATGTTTAAGGAATTTTTGCCCTTAATCATTTTCCTACAGCATGTTTGAA
ACACCTCTCCATCTCTTGTTTTTTGAATGGTTTTACAATTCTTTGAATATATGGATAAAGAGGG
GAAATTAATCTCAAATGTTTTGTTACTTATCAGGTGGGGCATTAAGCATTGTCTACTGTTGGGA
ATCGTATGAGTTTTTATATCCTTAATTACTCTAACAATTTGGCATTTGAAAGTGCGAGGCAGTG
TCAGGATTGATAGTCAAAACGAAGTTCTTCAATCCTTTGATCCTCCAAATTAAATGTATATTCG
GGTCCCTGTGATTCTGATACTTGGAGGAAATGTTCATCCACTTCCACTGATAACTAAACTCAAG
GCTTTTCTCATTATCTGAGATGCTAAGCCACCTCCATGTACTATCAAACGACATTTTAGTAGAT
GAAAGCTGGTTAGGCCTTTCTCTAATTTCTTTCTTTCTCCCTTCTCCCCCAATTTAAAAACATG
GAAAAGCTGGCCTGGTGGCAGACGCCTTTAATCCTAGCTCTTGGGAGGCAGAGGCAGGGAGCTC
TCTCAGTTAGAGACCAGACTGGTCTACATAATAAGTTTCCAGACAGTCAGAGGTATATAGTAAG
ACCTTGTCTTAAAACAGACGAACAAATCAGTATGGGAATAATCGTGATTTTTCTTGCACACTTA
CTTTTCTTTGCCACTGGAGGTTAGCTCACTGGGAGACATGCATATGACTTGTGAACTGCAGAGA
GGAACTTGGTGCTGGAATAGCTATGGGGTGTTGTTCCCTTATTTTATGCTAAAGAAGTGTGAAA
ATGTATTTATTTTTTTAAAACAAGACTCATGGGCCATTCATTGGTGAAAGGAGTGTTTTGCATG
TGTAGTGATCGCTAAGACACCAGTAAGAAAGAAGAAGACACAAAAGTCTCTGTATTTTAATGTT
TGAAGAATGTAGTTTATCTCGGGATGGACCTTCTCAAAGTGTACCTTGGGGTATCAGTATAATT
AATTGTTTTGATTTCACTAGTGATTGTACATGTCATTGGCCTTTGACTTCAGAAAGAAAAAAAA
AAACCCAACTAGGGCAGACACATAGGGAAGGAAACATCTTTGCCCAAGAGAGTGATCTAGGATC
AGTGTCAGGCTTCATGGTTTTTTTTAAGCTCCTTGGCAGGTCTCACTGTAATATTTCCACAAAA
CGGTAGTGAATGGCCCTCTGAATAATAAGCAACTTTTCAAGAGCCAAAGCATGCGGTGTGCAGC
ATGCTGGGACTGGAATATGGAAATTGTTTTAATTTCTTCTTTTCTCTTATGAGGAAGTCACTGC
ACTTGGTTTGTCCAGACAAGAGAGTTCATCCCCTGTATCGAAACAGTGATGAATCAAAACATGT
TGGAGCAAGTTTTAAAAAATCAAAATTAAACTGGTTTCTCTTAAATAGCTTAAAGCTTTCCACA
GTACAAAATAAATTAAGCATTGTAAAATGAAATTAATTCAAGTAATCACTCAGTACAGAAGTCT
AAGCATATATATCATCAGTCTTGTAATTCCAGGGTATAATTAAATTCTCAGAAATCTGCTAAAT
TCCTCCTAATTTGGTTTCTATATACATTTAACAAGACAGAGAGCAAATGTTTGTTAATCTGTAG
CATGCCAAAGAGAATGTGGGTGAAGTTGTCTTCTAATTGCGGGGGCCTTTCAGACTGGGCTTGA
AATGTGTCTGGGTAAGGCTCATCTGTAGCACCTTATCCCCACACTACATTAAAGTTTCCATAAC
CATTCTGACCAGAGACTGAATTTTTGTTTATTGAAGTAAAATCAGTAAAACTATGCAATTGCCT
CTGACTGGTGCTAATAGGTGCTAATTTGGCAGATTCTCAGACTGACTTTCAAGGTGGAATTAGA
TACTACCAAAATCTCCAGGAGAGCTCTGGTCCTCTCATGTAAGTACCTTTAATAAACTCAATGT
CCACAGAATAAAACCACTTTTGTAATGAAAATGTACCTGTTCCATGAATAAATATTTGGATTTT
GTGAATTTAAA

hide sequence

RefSeq Acc Id:

XM_008762257 ⟹ XP_008760479

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	144,673,823 - 144,849,468 (+)	NCBI
mRatBN7.2	3	124,221,136 - 124,396,797 (+)	NCBI
Rnor_6.0	3	129,885,841 - 130,069,371 (+)	NCBI

Sequence:

show sequence

GGAAGTAGGCCAAAGCTTCTGAAGCTTGGCCCGCCGCCTTTTAGTCTGAGTTTTCACATCCAGG
TGCTAGTCCACCAGTGACCCTGGACAGTAATAACACATATAAAGCCCGAACCCACCTCCTGCCA
CCATAGAACTGTTAAACACCAGGGTGCAGGGAGACGGAGATTTAAAGGGCCAACAACGTTGAGG
GAATTTCCATTGAATAAAATAGCCAAATGAATGGAACAGCAAATTTTATCATTTCATCAATGTA
TGGCTTTCTGCATCAATAGAGGTTCCGTACCTCATGTGGAAATCAGTAAATCATGGCATCTAAG
AAATTTGTCATCAAATGCGGGAACTTTGCAGTCCTGGTGGATCTTCATGTATTGCCACAAGGTT
CAAACAAAGATTCCAGTTGGTTTTCTGAACAGAAGAAAGAGGAAGTTTGTTTGCTGTTAAAAGA
AACCATTGATTCCAGAGTTAAGGAGTACGTGGGCATTTATAAGCAGCACAGGCCATCAACTGCA
GAATTCTCAAGATCCAGTCCCTTGTCCTTAAAAGGCTATGGCTTTCAGATCACAGCTTATTTCA
TCAGGAGAGGGATACACCTTCGCTGTATCCAGAGCTCCCGGAATACAGAACTTCGTATATTTCC
TGAGAGCTTTGTGGTGTGTGTTAGTCAGCTTGCATTTGGTCATGATACTTGGGCAAACCAGAAT
GAAAAGTCGACACAAAGAGCCCTCCATGGAGCGTCTGATTACTTTGCCCAGTGTGCGGAGAGTT
CACCTCCTCCTGGCATAAAGCTCAAGAGGAACACGCTGAAGGAAATTGTGAGAAGAGCTGAATC
AAAAGGCACTGATGTGAGCAAACCACAGACCAGCAGGGACCTTGTGGGAAAATCTAGTGACTCA
GTAATTACCGTGGTACCACGGAGGAGGGATGCCTCAGCCATTCTCCTGTCAGAACCTGTGGGTC
AAGCACAAGATGACATAAGAGCAGCCAAGAGCCACCAGGAGCTTCCTGTTCAAAAGCTGGAAAA
TGTCTCTCAGACTCAGCCAGGAGACACTCGCAGCCAGCAGCAACTTCATCCTGGGGAGTGGTTA
AAGACAGGGCTTCTAAGCAGGAGCCCTGTGTATAACTATGAGTCAGCATCGCCAGGTCCAAAGC
AAAGTCCACGAGCAGCCAAGACACAGCAGAAACGCAGGAATTGTGGCTCTGTGGAAGACTCTGA
CCACCGCAGGAGAGTTTCTCTTGGAAATGAAGGATTAGTCCCGGAGGACTCAGTGGTGGAAACG
AGCACAGCTGTCAGGGTTTTGCCAGCCTTAGAGTTGTCAAATCCTGGGTTGCTTTTGAAACAAG
ATTTGGCAAAAGCCACAGCTAAAGAAGAGCTGCATGCTTTGGAAAACCTCTCCTCCAGACATCT
TGTGACAGACAACCCAGGGCAGGCGCGGCCAACTGGCTCAGCCACAGTCACTGAAAGATTAGCT
CCAGTTCAGAGCGGCCCCAGCAAGAAAAGAAAGAAACTGCAAAGTTCCAGCAGAGGATGTAGTG
GCAAGAAAAGCTGAGTATACAGTACCTGGGGTTTGGAAGGAATTAGGGTGATTACTTTAAATAA
ACAAATATTTAGGAGCTGGAGTTATGTCTCAGCTTTTAATCTTGCAGAGGACCCAGATTAGGTT
CCAGGAACCTACAGGGTTACTCATAACCATCCCGAACTCCAGATCCAGAAGACCCAACACCATT
TTTGACTTCCATGGGCACCGGGCATGCGCATGGTGTGCATAAATACCAGGAAAACACACATACA
TGTAAATCTTTTGGTAAAATTGTTTGTATTGGAATTGGCCTTCATAGTCACCTCCTGGAGGCTG
TTTTCCTAACAAGCTTGTTACTTTCTTATCATATTTATAACTGTCTCCAGGAAATACATTGACA
AAGAGCTTTCCACTGATCAAGGAGTAAACCATATATCTAGGACCCCATGGAGAAATCAGTAATG
GTGGCCTCCTCAGCCCATCTCTATGAAGACCTTCTGATGGAAGAGAGAGACAGCGTCAGGTACC
ACAGGCCAGTTCTAGGGCTGCAGTCCTCTTGTTTCTCAAACTGAGTACCTGACAGGAAAAGTCG
GTCACAGTCTCTGCATGTGGTTCTGTGAGGAATGCAAGTATTGGGGTCTCAGGGCCTATGGAAT
GAGGAACTGTGATTCTGAAATAGACTAACGTTAAAAACAATTCCCTAGAACTTACTTGCTACGG
CCCAGTTACCATGGCTTACATCAGCTGGGGTCACACGTGGAAATGCACACCCCGTGCTTTCTTC
AGACTTGTGAAGTATTTAGATTGGATTTGGTGTGTGAGTCACTCTGTTCCCAGGTTCTACTATA
GGATGGACACAATGCCTAAGGAGCTGATACATCTGCAGTTGCCAGAGATGTGTGGGTAATTCAT
CAGTCTTGGGTGAAGACAGGGAAGAGCTGTGCTCTCTGTAACACAAGTTTAACCCTGTCCTTGT
TTACACCTCCCATATTCTGCTTACAGTTAAGACAGACCAGAACTCAAACAAGCTCAGTGGCCAT
TCCAGTTCCCAATTTGGAAAAATTCCCAGGGTATTTAAATGTCCTCTTCAGTTGTGTAGCCAAC
TCTCAAGAAAGACAGGAAGTTGTCAACCTGGAAGTTTCATCTGCCACCCCAACCTCAAGGCTCT
CACAGCTACTTGCTGGTACCCCTCCCCTTCCCCACCTAGCTCTTCTCTTCTTTTTCCTCCTTGA
AAGCTAAGATGTCGTGTCCCCCATGGAAGCATGAGGAGCCCCCATTGTACACCAAGAAGCAGCT
CACTCGGAGACCAGAGGGTGCTTCCCTTTCCAGAGCGAAGATATTCTGACCTAGAATACACTGG
GTTTTAATTGTTTAATGCTTAAGGTCGTATGCTATGCTGTACTGTACTTACAAAGGATGTGCTT
TCAAGAAGTGTTTTCATTTTCAGTGTGTTCTATTATATTATAGGAAATAGTGGTTATTGTGACC
AATGATTTAAAAAAATAGTATGTTAGAGTTGTAGATAAATGTGACCTTTGTCACAGCCTTCATA
CACAAAGAATTTTAACAGGATTAACAGAGCTCTGGGCTCCCACATTCTGCCATATGTTTAAGGA
ATTTTTGCCCTTAATCATTTTCCTACAGCATGTTTGAAACACCTCTCCATCTCTTGTTTTTTGA
ATGGTTTTACAATTCTTTGAATATATGGATAAAGAGGGGAAATTAATCTCAAATGTTTTGTTAC
TTATCAGGTGGGGCATTAAGCATTGTCTACTGTTGGGAATCGTATGAGTTTTTATATCCTTAAT
TACTCTAACAATTTGGCATTTGAAAGTGCGAGGCAGTGTCAGGATTGATAGTCAAAACGAAGTT
CTTCAATCCTTTGATCCTCCAAATTAAATGTATATTCGGGTCCCTGTGATTCTGATACTTGGAG
GAAATGTTCATCCACTTCCACTGATAACTAAACTCAAGGCTTTTCTCATTATCTGAGATGCTAA
GCCACCTCCATGTACTATCAAACGACATTTTAGTAGATGAAAGCTGGTTAGGCCTTTCTCTAAT
TTCTTTCTTTCTCCCTTCTCCCCCAATTTAAAAACATGGAAAAGCTGGCCTGGTGGCAGACGCC
TTTAATCCTAGCTCTTGGGAGGCAGAGGCAGGGAGCTCTCTCAGTTAGAGACCAGACTGGTCTA
CATAATAAGTTTCCAGACAGTCAGAGGTATATAGTAAGACCTTGTCTTAAAACAGACGAACAAA
TCAGTATGGGAATAATCGTGATTTTTCTTGCACACTTACTTTTCTTTGCCACTGGAGGTTAGCT
CACTGGGAGACATGCATATGACTTGTGAACTGCAGAGAGGAACTTGGTGCTGGAATAGCTATGG
GGTGTTGTTCCCTTATTTTATGCTAAAGAAGTGTGAAAATGTATTTATTTTTTTAAAACAAGAC
TCATGGGCCATTCATTGGTGAAAGGAGTGTTTTGCATGTGTAGTGATCGCTAAGACACCAGTAA
GAAAGAAGAAGACACAAAAGTCTCTGTATTTTAATGTTTGAAGAATGTAGTTTATCTCGGGATG
GACCTTCTCAAAGTGTACCTTGGGGTATCAGTATAATTAATTGTTTTGATTTCACTAGTGATTG
TACATGTCATTGGCCTTTGACTTCAGAAAGAAAAAAAAAAACCCAACTAGGGCAGACACATAGG
GAAGGAAACATCTTTGCCCAAGAGAGTGATCTAGGATCAGTGTCAGGCTTCATGGTTTTTTTTA
AGCTCCTTGGCAGGTCTCACTGTAATATTTCCACAAAACGGTAGTGAATGGCCCTCTGAATAAT
AAGCAACTTTTCAAGAGCCAAAGCATGCGGTGTGCAGCATGCTGGGACTGGAATATGGAAATTG
TTTTAATTTCTTCTTTTCTCTTATGAGGAAGTCACTGCACTTGGTTTGTCCAGACAAGAGAGTT
CATCCCCTGTATCGAAACAGTGATGAATCAAAACATGTTGGAGCAAGTTTTAAAAAATCAAAAT
TAAACTGGTTTCTCTTAAATAGCTTAAAGCTTTCCACAGTACAAAATAAATTAAGCATTGTAAA
ATGAAATTAATTCAAGTAATCACTCAGTACAGAAGTCTAAGCATATATATCATCAGTCTTGTAA
TTCCAGGGTATAATTAAATTCTCAGAAATCTGCTAAATTCCTCCTAATTTGGTTTCTATATACA
TTTAACAAGACAGAGAGCAAATGTTTGTTAATCTGTAGCATGCCAAAGAGAATGTGGGTGAAGT
TGTCTTCTAATTGCGGGGGCCTTTCAGACTGGGCTTGAAATGTGTCTGGGTAAGGCTCATCTGT
AGCACCTTATCCCCACACTACATTAAAGTTTCCATAACCATTCTGACCAGAGACTGAATTTTTG
TTTATTGAAGTAAAATCAGTAAAACTATGCAATTGCCTCTGACTGGTGCTAATAGGTGCTAATT
TGGCAGATTCTCAGACTGACTTTCAAGGTGGAATTAGATACTACCAAAATCTCCAGGAGAGCTC
TGGTCCTCTCATGTAAGTACCTTTAATAAACTCAATGTCCACAGAATAAAACCACTTTTGTAAT
GAAAATGTACCTGTTCCATGAATAAATATTTGGATTTTGTGAATTTAAA

hide sequence

RefSeq Acc Id:

XM_008762259 ⟹ XP_008760481

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	144,789,965 - 144,849,468 (+)	NCBI
mRatBN7.2	3	124,337,293 - 124,396,797 (+)	NCBI
Rnor_6.0	3	130,028,538 - 130,069,371 (+)	NCBI

Sequence:

show sequence

TGTGTGTGTCTGTGTCTGTGTCTGTGTCTGTGTATGTGTGTTTGTGTGCAATATTCTAATGATT
GAAGAGTATAGTTAAGCTGGTCACTGGGCAAGGGAGTCTTCAGCAGTCATACCTCAAATGTGTA
TGCCACATTAAATAATGGGAACATTACTTCCATGGAGTTCTATGATTAATTGATCATATATCCC
CATTGCAAATAGCTTCAGGTTTTTTGTTTGTCCTTTGTTTGCTTGTTTGTTTGTTTGTATGTTT
GAAGAAGAGTTTCTTTGTGTAATGCTGGCTGTCCTAGAGCTCCTTTGTAGACCGAGCTAGTCTT
GATCTCAGATCTGCCTGCCACTGCCTCCAGAGTGCTGGAATTAAAGGCTTGTGCCAGTGTACCT
CAAATCTTTGCTATATTTAATCATTTAATCAGAGGAAGTTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCATTGTGTATATGGAGGTGTTTGTTCCTGTGCTCTTGCCATGTCAT
GCATGTGGAGGTCAGAGAACAAGTTTGTAGAGTCGATTCTCTCTTTCCACCATTACATGCTGGG
AATAGAGCTCATAGCATACTTACATCGTTGGGCCTTTATCCATCTTGCTGGCCTAGAAGGAATC
AGTCTTAACTGTTTCAGGGGGTTAAGAAAAAGGAACACCAGCAGTTCCCATCTATTTAGCTGAA
AAATATTTTTCCTTTTTTTTTTAATTATAGCATCATATTTGCAGCATTTTATTACTACATCAAA
GAGCCTTGGATATGTTTGCAGTTTCCTCCATTTCTGCTGATGCTTCTTCCACTCCCGTCCTTAA
GCAACTGTTTACTGTGCTGACCTTGACATTTCATGTCATAGAATGCGCACCACGTGCTTCTCTG
AGGATTCATCTGGAAAAAAACAAGTGTTACGGCAGATCCCATGCTTGCTATGGCTTTCAGATCA
CAGCTTATTTCATCAGGAGAGGGATACACCTTCGCTGTATCCAGAGCTCCCGGAATACAGAACT
TCGTATATTTCCTGAGAGCTTTGTGGTGTGTGTTAGTCAGCTTGCATTTGGTCATGATACTTGG
GCAAACCAGAATGAAAAGTCGACACAAAGAGCCCTCCATGGAGCGTCTGATTACTTTGCCCAGT
GTGCGGAGAGTTCACCTCCTCCTGGCATAAAGCTCAAGAGGAACACGCTGAAGGAAATTGTGAG
AAGAGCTGAATCAAAAGGCACTGATGTGAGCAAACCACAGACCAGCAGGGACCTTGTGGGAAAA
TCTAGTGACTCAGTAATTACCGTGGTACCACGGAGGAGGGATGCCTCAGCCATTCTCCTGTCAG
AACCTGTGGGTCAAGCACAAGATGACATAAGAGCAGCCAAGAGCCACCAGGAGCTTCCTGTTCA
AAAGCTGGAAAATGTCTCTCAGACTCAGCCAGGAGACACTCGCAGCCAGCAGCAACTTCATCCT
GGGGAGTGGTTAAAGACAGGGCTTCTAAGCAGGAGCCCTGTGTATAACTATGAGTCAGCATCGC
CAGGTCCAAAGCAAAGTCCACGAGCAGCCAAGACACAGCAGAAACGCAGGAATTGTGGCTCTGT
GGAAGACTCTGACCACCGCAGGAGAGTTTCTCTTGGAAATGAAGGATTAGTCCCGGAGGACTCA
GTGGTGGAAACGAGCACAGCTGTCAGGGTTTTGCCAGCCTTAGAGTTGTCAAATCCTGGGTTGC
TTTTGAAACAAGATTTGGCAAAAGCCACAGCTAAAGAAGAGCTGCATGCTTTGGAAAACCTCTC
CTCCAGACATCTTGTGACAGACAACCCAGGGCAGGCGCGGCCAACTGGCTCAGCCACAGTCACT
GAAAGATTAGCTCCAGTTCAGAGCGGCCCCAGCAAGAAAAGAAAGAAACTGCAAAGTTCCAGCA
GAGGATGTAGTGGCAAGAAAAGCTGAGTATACAGTACCTGGGGTTTGGAAGGAATTAGGGTGAT
TACTTTAAATAAACAAATATTTAGGAGCTGGAGTTATGTCTCAGCTTTTAATCTTGCAGAGGAC
CCAGATTAGGTTCCAGGAACCTACAGGGTTACTCATAACCATCCCGAACTCCAGATCCAGAAGA
CCCAACACCATTTTTGACTTCCATGGGCACCGGGCATGCGCATGGTGTGCATAAATACCAGGAA
AACACACATACATGTAAATCTTTTGGTAAAATTGTTTGTATTGGAATTGGCCTTCATAGTCACC
TCCTGGAGGCTGTTTTCCTAACAAGCTTGTTACTTTCTTATCATATTTATAACTGTCTCCAGGA
AATACATTGACAAAGAGCTTTCCACTGATCAAGGAGTAAACCATATATCTAGGACCCCATGGAG
AAATCAGTAATGGTGGCCTCCTCAGCCCATCTCTATGAAGACCTTCTGATGGAAGAGAGAGACA
GCGTCAGGTACCACAGGCCAGTTCTAGGGCTGCAGTCCTCTTGTTTCTCAAACTGAGTACCTGA
CAGGAAAAGTCGGTCACAGTCTCTGCATGTGGTTCTGTGAGGAATGCAAGTATTGGGGTCTCAG
GGCCTATGGAATGAGGAACTGTGATTCTGAAATAGACTAACGTTAAAAACAATTCCCTAGAACT
TACTTGCTACGGCCCAGTTACCATGGCTTACATCAGCTGGGGTCACACGTGGAAATGCACACCC
CGTGCTTTCTTCAGACTTGTGAAGTATTTAGATTGGATTTGGTGTGTGAGTCACTCTGTTCCCA
GGTTCTACTATAGGATGGACACAATGCCTAAGGAGCTGATACATCTGCAGTTGCCAGAGATGTG
TGGGTAATTCATCAGTCTTGGGTGAAGACAGGGAAGAGCTGTGCTCTCTGTAACACAAGTTTAA
CCCTGTCCTTGTTTACACCTCCCATATTCTGCTTACAGTTAAGACAGACCAGAACTCAAACAAG
CTCAGTGGCCATTCCAGTTCCCAATTTGGAAAAATTCCCAGGGTATTTAAATGTCCTCTTCAGT
TGTGTAGCCAACTCTCAAGAAAGACAGGAAGTTGTCAACCTGGAAGTTTCATCTGCCACCCCAA
CCTCAAGGCTCTCACAGCTACTTGCTGGTACCCCTCCCCTTCCCCACCTAGCTCTTCTCTTCTT
TTTCCTCCTTGAAAGCTAAGATGTCGTGTCCCCCATGGAAGCATGAGGAGCCCCCATTGTACAC
CAAGAAGCAGCTCACTCGGAGACCAGAGGGTGCTTCCCTTTCCAGAGCGAAGATATTCTGACCT
AGAATACACTGGGTTTTAATTGTTTAATGCTTAAGGTCGTATGCTATGCTGTACTGTACTTACA
AAGGATGTGCTTTCAAGAAGTGTTTTCATTTTCAGTGTGTTCTATTATATTATAGGAAATAGTG
GTTATTGTGACCAATGATTTAAAAAAATAGTATGTTAGAGTTGTAGATAAATGTGACCTTTGTC
ACAGCCTTCATACACAAAGAATTTTAACAGGATTAACAGAGCTCTGGGCTCCCACATTCTGCCA
TATGTTTAAGGAATTTTTGCCCTTAATCATTTTCCTACAGCATGTTTGAAACACCTCTCCATCT
CTTGTTTTTTGAATGGTTTTACAATTCTTTGAATATATGGATAAAGAGGGGAAATTAATCTCAA
ATGTTTTGTTACTTATCAGGTGGGGCATTAAGCATTGTCTACTGTTGGGAATCGTATGAGTTTT
TATATCCTTAATTACTCTAACAATTTGGCATTTGAAAGTGCGAGGCAGTGTCAGGATTGATAGT
CAAAACGAAGTTCTTCAATCCTTTGATCCTCCAAATTAAATGTATATTCGGGTCCCTGTGATTC
TGATACTTGGAGGAAATGTTCATCCACTTCCACTGATAACTAAACTCAAGGCTTTTCTCATTAT
CTGAGATGCTAAGCCACCTCCATGTACTATCAAACGACATTTTAGTAGATGAAAGCTGGTTAGG
CCTTTCTCTAATTTCTTTCTTTCTCCCTTCTCCCCCAATTTAAAAACATGGAAAAGCTGGCCTG
GTGGCAGACGCCTTTAATCCTAGCTCTTGGGAGGCAGAGGCAGGGAGCTCTCTCAGTTAGAGAC
CAGACTGGTCTACATAATAAGTTTCCAGACAGTCAGAGGTATATAGTAAGACCTTGTCTTAAAA
CAGACGAACAAATCAGTATGGGAATAATCGTGATTTTTCTTGCACACTTACTTTTCTTTGCCAC
TGGAGGTTAGCTCACTGGGAGACATGCATATGACTTGTGAACTGCAGAGAGGAACTTGGTGCTG
GAATAGCTATGGGGTGTTGTTCCCTTATTTTATGCTAAAGAAGTGTGAAAATGTATTTATTTTT
TTAAAACAAGACTCATGGGCCATTCATTGGTGAAAGGAGTGTTTTGCATGTGTAGTGATCGCTA
AGACACCAGTAAGAAAGAAGAAGACACAAAAGTCTCTGTATTTTAATGTTTGAAGAATGTAGTT
TATCTCGGGATGGACCTTCTCAAAGTGTACCTTGGGGTATCAGTATAATTAATTGTTTTGATTT
CACTAGTGATTGTACATGTCATTGGCCTTTGACTTCAGAAAGAAAAAAAAAAACCCAACTAGGG
CAGACACATAGGGAAGGAAACATCTTTGCCCAAGAGAGTGATCTAGGATCAGTGTCAGGCTTCA
TGGTTTTTTTTAAGCTCCTTGGCAGGTCTCACTGTAATATTTCCACAAAACGGTAGTGAATGGC
CCTCTGAATAATAAGCAACTTTTCAAGAGCCAAAGCATGCGGTGTGCAGCATGCTGGGACTGGA
ATATGGAAATTGTTTTAATTTCTTCTTTTCTCTTATGAGGAAGTCACTGCACTTGGTTTGTCCA
GACAAGAGAGTTCATCCCCTGTATCGAAACAGTGATGAATCAAAACATGTTGGAGCAAGTTTTA
AAAAATCAAAATTAAACTGGTTTCTCTTAAATAGCTTAAAGCTTTCCACAGTACAAAATAAATT
AAGCATTGTAAAATGAAATTAATTCAAGTAATCACTCAGTACAGAAGTCTAAGCATATATATCA
TCAGTCTTGTAATTCCAGGGTATAATTAAATTCTCAGAAATCTGCTAAATTCCTCCTAATTTGG
TTTCTATATACATTTAACAAGACAGAGAGCAAATGTTTGTTAATCTGTAGCATGCCAAAGAGAA
TGTGGGTGAAGTTGTCTTCTAATTGCGGGGGCCTTTCAGACTGGGCTTGAAATGTGTCTGGGTA
AGGCTCATCTGTAGCACCTTATCCCCACACTACATTAAAGTTTCCATAACCATTCTGACCAGAG
ACTGAATTTTTGTTTATTGAAGTAAAATCAGTAAAACTATGCAATTGCCTCTGACTGGTGCTAA
TAGGTGCTAATTTGGCAGATTCTCAGACTGACTTTCAAGGTGGAATTAGATACTACCAAAATCT
CCAGGAGAGCTCTGGTCCTCTCATGTAAGTACCTTTAATAAACTCAATGTCCACAGAATAAAAC
CACTTTTGTAATGAAAATGTACCTGTTCCATGAATAAATATTTGGATTTTGTGAATTTAAA

hide sequence

RefSeq Acc Id:

XM_008762260 ⟹ XP_008760482

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	144,794,637 - 144,849,468 (+)	NCBI
mRatBN7.2	3	124,337,293 - 124,396,797 (+)	NCBI
Rnor_6.0	3	130,029,685 - 130,069,371 (+)	NCBI

Sequence:

show sequence

ATTCATCTGGAAAAAAACAAGTGTTACGGCAGATCCCATGCTTGTGAGTCCCAGCAATGGGGAG
GGCAGGGTCAGGCAGATCATTATGGCTCAGTGGACGTCAGCCTAGCTTACTGGACACCACAAAG
AAACTCGGTCTCAAGGAACAAGGCTATGGCTTTCAGATCACAGCTTATTTCATCAGGAGAGGGA
TACACCTTCGCTGTATCCAGAGCTCCCGGAATACAGAACTTCGTATATTTCCTGAGAGCTTTGT
GGTGTGTGTTAGTCAGCTTGCATTTGGTCATGATACTTGGGCAAACCAGAATGAAAAGTCGACA
CAAAGAGCCCTCCATGGAGCGTCTGATTACTTTGCCCAGTGTGCGGAGAGTTCACCTCCTCCTG
GCATAAAGCTCAAGAGGAACACGCTGAAGGAAATTGTGAGAAGAGCTGAATCAAAAGGCACTGA
TGTGAGCAAACCACAGACCAGCAGGGACCTTGTGGGAAAATCTAGTGACTCAGTAATTACCGTG
GTACCACGGAGGAGGGATGCCTCAGCCATTCTCCTGTCAGAACCTGTGGGTCAAGCACAAGATG
ACATAAGAGCAGCCAAGAGCCACCAGGAGCTTCCTGTTCAAAAGCTGGAAAATGTCTCTCAGAC
TCAGCCAGGAGACACTCGCAGCCAGCAGCAACTTCATCCTGGGGAGTGGTTAAAGACAGGGCTT
CTAAGCAGGAGCCCTGTGTATAACTATGAGTCAGCATCGCCAGGTCCAAAGCAAAGTCCACGAG
CAGCCAAGACACAGCAGAAACGCAGGAATTGTGGCTCTGTGGAAGACTCTGACCACCGCAGGAG
AGTTTCTCTTGGAAATGAAGGATTAGTCCCGGAGGACTCAGTGGTGGAAACGAGCACAGCTGTC
AGGGTTTTGCCAGCCTTAGAGTTGTCAAATCCTGGGTTGCTTTTGAAACAAGATTTGGCAAAAG
CCACAGCTAAAGAAGAGCTGCATGCTTTGGAAAACCTCTCCTCCAGACATCTTGTGACAGACAA
CCCAGGGCAGGCGCGGCCAACTGGCTCAGCCACAGTCACTGAAAGATTAGCTCCAGTTCAGAGC
GGCCCCAGCAAGAAAAGAAAGAAACTGCAAAGTTCCAGCAGAGGATGTAGTGGCAAGAAAAGCT
GAGTATACAGTACCTGGGGTTTGGAAGGAATTAGGGTGATTACTTTAAATAAACAAATATTTAG
GAGCTGGAGTTATGTCTCAGCTTTTAATCTTGCAGAGGACCCAGATTAGGTTCCAGGAACCTAC
AGGGTTACTCATAACCATCCCGAACTCCAGATCCAGAAGACCCAACACCATTTTTGACTTCCAT
GGGCACCGGGCATGCGCATGGTGTGCATAAATACCAGGAAAACACACATACATGTAAATCTTTT
GGTAAAATTGTTTGTATTGGAATTGGCCTTCATAGTCACCTCCTGGAGGCTGTTTTCCTAACAA
GCTTGTTACTTTCTTATCATATTTATAACTGTCTCCAGGAAATACATTGACAAAGAGCTTTCCA
CTGATCAAGGAGTAAACCATATATCTAGGACCCCATGGAGAAATCAGTAATGGTGGCCTCCTCA
GCCCATCTCTATGAAGACCTTCTGATGGAAGAGAGAGACAGCGTCAGGTACCACAGGCCAGTTC
TAGGGCTGCAGTCCTCTTGTTTCTCAAACTGAGTACCTGACAGGAAAAGTCGGTCACAGTCTCT
GCATGTGGTTCTGTGAGGAATGCAAGTATTGGGGTCTCAGGGCCTATGGAATGAGGAACTGTGA
TTCTGAAATAGACTAACGTTAAAAACAATTCCCTAGAACTTACTTGCTACGGCCCAGTTACCAT
GGCTTACATCAGCTGGGGTCACACGTGGAAATGCACACCCCGTGCTTTCTTCAGACTTGTGAAG
TATTTAGATTGGATTTGGTGTGTGAGTCACTCTGTTCCCAGGTTCTACTATAGGATGGACACAA
TGCCTAAGGAGCTGATACATCTGCAGTTGCCAGAGATGTGTGGGTAATTCATCAGTCTTGGGTG
AAGACAGGGAAGAGCTGTGCTCTCTGTAACACAAGTTTAACCCTGTCCTTGTTTACACCTCCCA
TATTCTGCTTACAGTTAAGACAGACCAGAACTCAAACAAGCTCAGTGGCCATTCCAGTTCCCAA
TTTGGAAAAATTCCCAGGGTATTTAAATGTCCTCTTCAGTTGTGTAGCCAACTCTCAAGAAAGA
CAGGAAGTTGTCAACCTGGAAGTTTCATCTGCCACCCCAACCTCAAGGCTCTCACAGCTACTTG
CTGGTACCCCTCCCCTTCCCCACCTAGCTCTTCTCTTCTTTTTCCTCCTTGAAAGCTAAGATGT
CGTGTCCCCCATGGAAGCATGAGGAGCCCCCATTGTACACCAAGAAGCAGCTCACTCGGAGACC
AGAGGGTGCTTCCCTTTCCAGAGCGAAGATATTCTGACCTAGAATACACTGGGTTTTAATTGTT
TAATGCTTAAGGTCGTATGCTATGCTGTACTGTACTTACAAAGGATGTGCTTTCAAGAAGTGTT
TTCATTTTCAGTGTGTTCTATTATATTATAGGAAATAGTGGTTATTGTGACCAATGATTTAAAA
AAATAGTATGTTAGAGTTGTAGATAAATGTGACCTTTGTCACAGCCTTCATACACAAAGAATTT
TAACAGGATTAACAGAGCTCTGGGCTCCCACATTCTGCCATATGTTTAAGGAATTTTTGCCCTT
AATCATTTTCCTACAGCATGTTTGAAACACCTCTCCATCTCTTGTTTTTTGAATGGTTTTACAA
TTCTTTGAATATATGGATAAAGAGGGGAAATTAATCTCAAATGTTTTGTTACTTATCAGGTGGG
GCATTAAGCATTGTCTACTGTTGGGAATCGTATGAGTTTTTATATCCTTAATTACTCTAACAAT
TTGGCATTTGAAAGTGCGAGGCAGTGTCAGGATTGATAGTCAAAACGAAGTTCTTCAATCCTTT
GATCCTCCAAATTAAATGTATATTCGGGTCCCTGTGATTCTGATACTTGGAGGAAATGTTCATC
CACTTCCACTGATAACTAAACTCAAGGCTTTTCTCATTATCTGAGATGCTAAGCCACCTCCATG
TACTATCAAACGACATTTTAGTAGATGAAAGCTGGTTAGGCCTTTCTCTAATTTCTTTCTTTCT
CCCTTCTCCCCCAATTTAAAAACATGGAAAAGCTGGCCTGGTGGCAGACGCCTTTAATCCTAGC
TCTTGGGAGGCAGAGGCAGGGAGCTCTCTCAGTTAGAGACCAGACTGGTCTACATAATAAGTTT
CCAGACAGTCAGAGGTATATAGTAAGACCTTGTCTTAAAACAGACGAACAAATCAGTATGGGAA
TAATCGTGATTTTTCTTGCACACTTACTTTTCTTTGCCACTGGAGGTTAGCTCACTGGGAGACA
TGCATATGACTTGTGAACTGCAGAGAGGAACTTGGTGCTGGAATAGCTATGGGGTGTTGTTCCC
TTATTTTATGCTAAAGAAGTGTGAAAATGTATTTATTTTTTTAAAACAAGACTCATGGGCCATT
CATTGGTGAAAGGAGTGTTTTGCATGTGTAGTGATCGCTAAGACACCAGTAAGAAAGAAGAAGA
CACAAAAGTCTCTGTATTTTAATGTTTGAAGAATGTAGTTTATCTCGGGATGGACCTTCTCAAA
GTGTACCTTGGGGTATCAGTATAATTAATTGTTTTGATTTCACTAGTGATTGTACATGTCATTG
GCCTTTGACTTCAGAAAGAAAAAAAAAAACCCAACTAGGGCAGACACATAGGGAAGGAAACATC
TTTGCCCAAGAGAGTGATCTAGGATCAGTGTCAGGCTTCATGGTTTTTTTTAAGCTCCTTGGCA
GGTCTCACTGTAATATTTCCACAAAACGGTAGTGAATGGCCCTCTGAATAATAAGCAACTTTTC
AAGAGCCAAAGCATGCGGTGTGCAGCATGCTGGGACTGGAATATGGAAATTGTTTTAATTTCTT
CTTTTCTCTTATGAGGAAGTCACTGCACTTGGTTTGTCCAGACAAGAGAGTTCATCCCCTGTAT
CGAAACAGTGATGAATCAAAACATGTTGGAGCAAGTTTTAAAAAATCAAAATTAAACTGGTTTC
TCTTAAATAGCTTAAAGCTTTCCACAGTACAAAATAAATTAAGCATTGTAAAATGAAATTAATT
CAAGTAATCACTCAGTACAGAAGTCTAAGCATATATATCATCAGTCTTGTAATTCCAGGGTATA
ATTAAATTCTCAGAAATCTGCTAAATTCCTCCTAATTTGGTTTCTATATACATTTAACAAGACA
GAGAGCAAATGTTTGTTAATCTGTAGCATGCCAAAGAGAATGTGGGTGAAGTTGTCTTCTAATT
GCGGGGGCCTTTCAGACTGGGCTTGAAATGTGTCTGGGTAAGGCTCATCTGTAGCACCTTATCC
CCACACTACATTAAAGTTTCCATAACCATTCTGACCAGAGACTGAATTTTTGTTTATTGAAGTA
AAATCAGTAAAACTATGCAATTGCCTCTGACTGGTGCTAATAGGTGCTAATTTGGCAGATTCTC
AGACTGACTTTCAAGGTGGAATTAGATACTACCAAAATCTCCAGGAGAGCTCTGGTCCTCTCAT
GTAAGTACCTTTAATAAACTCAATGTCCACAGAATAAAACCACTTTTGTAATGAAAATGTACCT
GTTCCATGAATAAATATTTGGATTTTGTGAATTTAAA

hide sequence

RefSeq Acc Id:

XM_008762261 ⟹ XP_008760483

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	144,673,823 - 144,849,468 (+)	NCBI
mRatBN7.2	3	124,221,136 - 124,396,797 (+)	NCBI
Rnor_6.0	3	129,885,841 - 130,069,371 (+)	NCBI

Sequence:

show sequence

GGAAGTAGGCCAAAGCTTCTGAAGCTTGGCCCGCCGCCTTTTAGTCTGAGTTTTCACATCCAGG
TGCTAGTCCACCAGTGACCCTGGACAGTAATAACACATATAAAGCCCGAACCCACCTCCTGCCA
CCATAGGTTCCGTACCTCATGTGGAAATCAGTAAATCATGGCATCTAAGAAATTTGTCATCAAA
TGCGGGAACTTTGCAGTCCTGGTGGATCTTCATGTATTGCCACAAGGTTCAAACAAAGATTCCA
GTTGGTTTTCTGAACAGAAGAAAGAGGCTATGGCTTTCAGATCACAGCTTATTTCATCAGGAGA
GGGATACACCTTCGCTGTATCCAGAGCTCCCGGAATACAGAACTTCGTATATTTCCTGAGAGCT
TTGTGGTGTGTGTTAGTCAGCTTGCATTTGGTCATGATACTTGGGCAAACCAGAATGAAAAGTC
GTGTGAGAAGAGCTGAATCAAAAGGCACTGATGTGAGCAAACCACAGACCAGCAGGGACCTTGT
GGGAAAATCTAGTGACTCAGTAATTACCGTGGTACCACGGAGGAGGGATGCCTCAGCCATTCTC
CTGTCAGAACCTGTGGGTCAAGCACAAGATGACATAAGAGCAGCCAAGAGCCACCAGGAGCTTC
CTGTTCAAAAGCTGGAAAATGTCTCTCAGACTCAGCCAGGAGACACTCGCAGCCAGCAGCAACT
TCATCCTGGGGAGTGGTTAAAGACAGGGCTTCTAAGCAGGAGCCCTGTGTATAACTATGAGTCA
GCATCGCCAGGTCCAAAGCAAAGTCCACGAGCAGCCAAGACACAGCAGAAACGCAGGAATTGTG
GCTCTGTGGAAGACTCTGACCACCGCAGGAGAGTTTCTCTTGGAAATGAAGGATTAGTCCCGGA
GGACTCAGTGGTGGAAACGAGCACAGCTGTCAGGGTTTTGCCAGCCTTAGAGTTGTCAAATCCT
GGGTTGCTTTTGAAACAAGATTTGGCAAAAGCCACAGCTAAAGAAGAGCTGCATGCTTTGGAAA
ACCTCTCCTCCAGACATCTTGTGACAGACAACCCAGGGCAGGCGCGGCCAACTGGCTCAGCCAC
AGTCACTGAAAGATTAGCTCCAGTTCAGAGCGGCCCCAGCAAGAAAAGAAAGAAACTGCAAAGT
TCCAGCAGAGGATGTAGTGGCAAGAAAAGCTGAGTATACAGTACCTGGGGTTTGGAAGGAATTA
GGGTGATTACTTTAAATAAACAAATATTTAGGAGCTGGAGTTATGTCTCAGCTTTTAATCTTGC
AGAGGACCCAGATTAGGTTCCAGGAACCTACAGGGTTACTCATAACCATCCCGAACTCCAGATC
CAGAAGACCCAACACCATTTTTGACTTCCATGGGCACCGGGCATGCGCATGGTGTGCATAAATA
CCAGGAAAACACACATACATGTAAATCTTTTGGTAAAATTGTTTGTATTGGAATTGGCCTTCAT
AGTCACCTCCTGGAGGCTGTTTTCCTAACAAGCTTGTTACTTTCTTATCATATTTATAACTGTC
TCCAGGAAATACATTGACAAAGAGCTTTCCACTGATCAAGGAGTAAACCATATATCTAGGACCC
CATGGAGAAATCAGTAATGGTGGCCTCCTCAGCCCATCTCTATGAAGACCTTCTGATGGAAGAG
AGAGACAGCGTCAGGTACCACAGGCCAGTTCTAGGGCTGCAGTCCTCTTGTTTCTCAAACTGAG
TACCTGACAGGAAAAGTCGGTCACAGTCTCTGCATGTGGTTCTGTGAGGAATGCAAGTATTGGG
GTCTCAGGGCCTATGGAATGAGGAACTGTGATTCTGAAATAGACTAACGTTAAAAACAATTCCC
TAGAACTTACTTGCTACGGCCCAGTTACCATGGCTTACATCAGCTGGGGTCACACGTGGAAATG
CACACCCCGTGCTTTCTTCAGACTTGTGAAGTATTTAGATTGGATTTGGTGTGTGAGTCACTCT
GTTCCCAGGTTCTACTATAGGATGGACACAATGCCTAAGGAGCTGATACATCTGCAGTTGCCAG
AGATGTGTGGGTAATTCATCAGTCTTGGGTGAAGACAGGGAAGAGCTGTGCTCTCTGTAACACA
AGTTTAACCCTGTCCTTGTTTACACCTCCCATATTCTGCTTACAGTTAAGACAGACCAGAACTC
AAACAAGCTCAGTGGCCATTCCAGTTCCCAATTTGGAAAAATTCCCAGGGTATTTAAATGTCCT
CTTCAGTTGTGTAGCCAACTCTCAAGAAAGACAGGAAGTTGTCAACCTGGAAGTTTCATCTGCC
ACCCCAACCTCAAGGCTCTCACAGCTACTTGCTGGTACCCCTCCCCTTCCCCACCTAGCTCTTC
TCTTCTTTTTCCTCCTTGAAAGCTAAGATGTCGTGTCCCCCATGGAAGCATGAGGAGCCCCCAT
TGTACACCAAGAAGCAGCTCACTCGGAGACCAGAGGGTGCTTCCCTTTCCAGAGCGAAGATATT
CTGACCTAGAATACACTGGGTTTTAATTGTTTAATGCTTAAGGTCGTATGCTATGCTGTACTGT
ACTTACAAAGGATGTGCTTTCAAGAAGTGTTTTCATTTTCAGTGTGTTCTATTATATTATAGGA
AATAGTGGTTATTGTGACCAATGATTTAAAAAAATAGTATGTTAGAGTTGTAGATAAATGTGAC
CTTTGTCACAGCCTTCATACACAAAGAATTTTAACAGGATTAACAGAGCTCTGGGCTCCCACAT
TCTGCCATATGTTTAAGGAATTTTTGCCCTTAATCATTTTCCTACAGCATGTTTGAAACACCTC
TCCATCTCTTGTTTTTTGAATGGTTTTACAATTCTTTGAATATATGGATAAAGAGGGGAAATTA
ATCTCAAATGTTTTGTTACTTATCAGGTGGGGCATTAAGCATTGTCTACTGTTGGGAATCGTAT
GAGTTTTTATATCCTTAATTACTCTAACAATTTGGCATTTGAAAGTGCGAGGCAGTGTCAGGAT
TGATAGTCAAAACGAAGTTCTTCAATCCTTTGATCCTCCAAATTAAATGTATATTCGGGTCCCT
GTGATTCTGATACTTGGAGGAAATGTTCATCCACTTCCACTGATAACTAAACTCAAGGCTTTTC
TCATTATCTGAGATGCTAAGCCACCTCCATGTACTATCAAACGACATTTTAGTAGATGAAAGCT
GGTTAGGCCTTTCTCTAATTTCTTTCTTTCTCCCTTCTCCCCCAATTTAAAAACATGGAAAAGC
TGGCCTGGTGGCAGACGCCTTTAATCCTAGCTCTTGGGAGGCAGAGGCAGGGAGCTCTCTCAGT
TAGAGACCAGACTGGTCTACATAATAAGTTTCCAGACAGTCAGAGGTATATAGTAAGACCTTGT
CTTAAAACAGACGAACAAATCAGTATGGGAATAATCGTGATTTTTCTTGCACACTTACTTTTCT
TTGCCACTGGAGGTTAGCTCACTGGGAGACATGCATATGACTTGTGAACTGCAGAGAGGAACTT
GGTGCTGGAATAGCTATGGGGTGTTGTTCCCTTATTTTATGCTAAAGAAGTGTGAAAATGTATT
TATTTTTTTAAAACAAGACTCATGGGCCATTCATTGGTGAAAGGAGTGTTTTGCATGTGTAGTG
ATCGCTAAGACACCAGTAAGAAAGAAGAAGACACAAAAGTCTCTGTATTTTAATGTTTGAAGAA
TGTAGTTTATCTCGGGATGGACCTTCTCAAAGTGTACCTTGGGGTATCAGTATAATTAATTGTT
TTGATTTCACTAGTGATTGTACATGTCATTGGCCTTTGACTTCAGAAAGAAAAAAAAAAACCCA
ACTAGGGCAGACACATAGGGAAGGAAACATCTTTGCCCAAGAGAGTGATCTAGGATCAGTGTCA
GGCTTCATGGTTTTTTTTAAGCTCCTTGGCAGGTCTCACTGTAATATTTCCACAAAACGGTAGT
GAATGGCCCTCTGAATAATAAGCAACTTTTCAAGAGCCAAAGCATGCGGTGTGCAGCATGCTGG
GACTGGAATATGGAAATTGTTTTAATTTCTTCTTTTCTCTTATGAGGAAGTCACTGCACTTGGT
TTGTCCAGACAAGAGAGTTCATCCCCTGTATCGAAACAGTGATGAATCAAAACATGTTGGAGCA
AGTTTTAAAAAATCAAAATTAAACTGGTTTCTCTTAAATAGCTTAAAGCTTTCCACAGTACAAA
ATAAATTAAGCATTGTAAAATGAAATTAATTCAAGTAATCACTCAGTACAGAAGTCTAAGCATA
TATATCATCAGTCTTGTAATTCCAGGGTATAATTAAATTCTCAGAAATCTGCTAAATTCCTCCT
AATTTGGTTTCTATATACATTTAACAAGACAGAGAGCAAATGTTTGTTAATCTGTAGCATGCCA
AAGAGAATGTGGGTGAAGTTGTCTTCTAATTGCGGGGGCCTTTCAGACTGGGCTTGAAATGTGT
CTGGGTAAGGCTCATCTGTAGCACCTTATCCCCACACTACATTAAAGTTTCCATAACCATTCTG
ACCAGAGACTGAATTTTTGTTTATTGAAGTAAAATCAGTAAAACTATGCAATTGCCTCTGACTG
GTGCTAATAGGTGCTAATTTGGCAGATTCTCAGACTGACTTTCAAGGTGGAATTAGATACTACC
AAAATCTCCAGGAGAGCTCTGGTCCTCTCATGTAAGTACCTTTAATAAACTCAATGTCCACAGA
ATAAAACCACTTTTGTAATGAAAATGTACCTGTTCCATGAATAAATATTTGGATTTTGTGAATT
TAAA

hide sequence

RefSeq Acc Id:

XM_017591988 ⟹ XP_017447477

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	144,673,823 - 144,849,468 (+)	NCBI
mRatBN7.2	3	124,221,136 - 124,396,797 (+)	NCBI
Rnor_6.0	3	129,885,841 - 130,069,371 (+)	NCBI

Sequence:

show sequence

GGAAGTAGGCCAAAGCTTCTGAAGCTTGGCCCGCCGCCTTTTAGTCTGAGTTTTCACATCCAGG
TGCTAGTCCACCAGTGACCCTGGACAGTAATAACACATATAAAGCCCGAACCCACCTCCTGCCA
CCATAGAACTGTTAAACACCAGGGTGCAGGGAGACGGAGATTTAAAGGGCCAACAACGTTGAGG
GAATTTCCATTGAATAAAATAGCCAAATGAATGGAACAGCAAATTTTATCATTTCATCAATGTA
TGGCTTTCTGCATCAATAGAGTTTTTTCTTTCGTGGTACTGCAGATTGAAGTCAGGGTTTGGTG
CCTCTTAGGCAGGAGCTTCACAGACTCTTCAGCCAGTTTGAATTGCTGACAGCCATCAGTATGT
TCCGTACCTCATGTGGAAATCAGTAAATCATGGCATCTAAGAAATTTGTCATCAAATGCGGGAA
CTTTGCAGTCCTGGTGGATCTTCATGTATTGCCACAAGGTTCAAACAAAGATTCCAGTTGGTTT
TCTGAACAGAAGAAAGAGGAAGTTTGTTTGCTGTTAAAAGAAACCATTGATTCCAGAGTTAAGG
AGTACGTGGGCATTTATAAGCAGCACAGGCCATCAACTGCAGAATTCTCAAGATCCAGTCCCTT
GTCCTTAAAAGGCTATGGCTTTCAGATCACAGCTTATTTCATCAGGAGAGGGATACACCTTCGC
TGTATCCAGAGCTCCCGGAATACAGAACTTCGTATATTTCCTGAGAGCTTTGTGGTGTGTGTTA
GTCAGCTTGCATTTGGTCATGATACTTGGGCAAACCAGAATGAAAAGTCGACACAAAGAGCCCT
CCATGGAGCGTCTGATTACTTTGCCCAGTGTGCGGAGAGTTCACCTCCTCCTGGCATAAAGCTC
AAGAGGAACACGCTGAAGGAAATTGTGAGAAGAGCTGAATCAAAAGGCACTGATGTGAGCAAAC
CACAGACCAGCAGGGACCTTGTGGGAAAATCTAGTGACTCAGTAATTACCGTGGTACCACGGAG
GAGGGATGCCTCAGCCATTCTCCTGTCAGAACCTGTGGGTCAAGCACAAGATGACATAAGAGCA
GCCAAGAGCCACCAGGAGCTTCCTGTTCAAAAGCTGGAAAATGTCTCTCAGACTCAGCCAGGAG
ACACTCGCAGCCAGCAGCAACTTCATCCTGGGGAGTGGTTAAAGACAGGGCTTCTAAGCAGGAG
CCCTGTGTATAACTATGAGTCAGCATCGCCAGGTCCAAAGCAAAGTCCACGAGCAGCCAAGACA
CAGCAGAAACGCAGGAATTGTGGCTCTGTGGAAGACTCTGACCACCGCAGGAGAGTTTCTCTTG
GAAATGAAGGATTAGTCCCGGAGGACTCAGTGGTGGAAACGAGCACAGCTGTCAGGGTTTTGCC
AGCCTTAGAGTTGTCAAATCCTGGGTTGCTTTTGAAACAAGATTTGGCAAAAGCCACAGCTAAA
GAAGAGCTGCATGCTTTGGAAAACCTCTCCTCCAGACATCTTGTGACAGACAACCCAGGGCAGG
CGCGGCCAACTGGCTCAGCCACAGTCACTGAAAGATTAGCTCCAGTTCAGAGCGGCCCCAGCAA
GAAAAGAAAGAAACTGCAAAGTTCCAGCAGAGGATGTAGTGGCAAGAAAAGCTGAGTATACAGT
ACCTGGGGTTTGGAAGGAATTAGGGTGATTACTTTAAATAAACAAATATTTAGGAGCTGGAGTT
ATGTCTCAGCTTTTAATCTTGCAGAGGACCCAGATTAGGTTCCAGGAACCTACAGGGTTACTCA
TAACCATCCCGAACTCCAGATCCAGAAGACCCAACACCATTTTTGACTTCCATGGGCACCGGGC
ATGCGCATGGTGTGCATAAATACCAGGAAAACACACATACATGTAAATCTTTTGGTAAAATTGT
TTGTATTGGAATTGGCCTTCATAGTCACCTCCTGGAGGCTGTTTTCCTAACAAGCTTGTTACTT
TCTTATCATATTTATAACTGTCTCCAGGAAATACATTGACAAAGAGCTTTCCACTGATCAAGGA
GTAAACCATATATCTAGGACCCCATGGAGAAATCAGTAATGGTGGCCTCCTCAGCCCATCTCTA
TGAAGACCTTCTGATGGAAGAGAGAGACAGCGTCAGGTACCACAGGCCAGTTCTAGGGCTGCAG
TCCTCTTGTTTCTCAAACTGAGTACCTGACAGGAAAAGTCGGTCACAGTCTCTGCATGTGGTTC
TGTGAGGAATGCAAGTATTGGGGTCTCAGGGCCTATGGAATGAGGAACTGTGATTCTGAAATAG
ACTAACGTTAAAAACAATTCCCTAGAACTTACTTGCTACGGCCCAGTTACCATGGCTTACATCA
GCTGGGGTCACACGTGGAAATGCACACCCCGTGCTTTCTTCAGACTTGTGAAGTATTTAGATTG
GATTTGGTGTGTGAGTCACTCTGTTCCCAGGTTCTACTATAGGATGGACACAATGCCTAAGGAG
CTGATACATCTGCAGTTGCCAGAGATGTGTGGGTAATTCATCAGTCTTGGGTGAAGACAGGGAA
GAGCTGTGCTCTCTGTAACACAAGTTTAACCCTGTCCTTGTTTACACCTCCCATATTCTGCTTA
CAGTTAAGACAGACCAGAACTCAAACAAGCTCAGTGGCCATTCCAGTTCCCAATTTGGAAAAAT
TCCCAGGGTATTTAAATGTCCTCTTCAGTTGTGTAGCCAACTCTCAAGAAAGACAGGAAGTTGT
CAACCTGGAAGTTTCATCTGCCACCCCAACCTCAAGGCTCTCACAGCTACTTGCTGGTACCCCT
CCCCTTCCCCACCTAGCTCTTCTCTTCTTTTTCCTCCTTGAAAGCTAAGATGTCGTGTCCCCCA
TGGAAGCATGAGGAGCCCCCATTGTACACCAAGAAGCAGCTCACTCGGAGACCAGAGGGTGCTT
CCCTTTCCAGAGCGAAGATATTCTGACCTAGAATACACTGGGTTTTAATTGTTTAATGCTTAAG
GTCGTATGCTATGCTGTACTGTACTTACAAAGGATGTGCTTTCAAGAAGTGTTTTCATTTTCAG
TGTGTTCTATTATATTATAGGAAATAGTGGTTATTGTGACCAATGATTTAAAAAAATAGTATGT
TAGAGTTGTAGATAAATGTGACCTTTGTCACAGCCTTCATACACAAAGAATTTTAACAGGATTA
ACAGAGCTCTGGGCTCCCACATTCTGCCATATGTTTAAGGAATTTTTGCCCTTAATCATTTTCC
TACAGCATGTTTGAAACACCTCTCCATCTCTTGTTTTTTGAATGGTTTTACAATTCTTTGAATA
TATGGATAAAGAGGGGAAATTAATCTCAAATGTTTTGTTACTTATCAGGTGGGGCATTAAGCAT
TGTCTACTGTTGGGAATCGTATGAGTTTTTATATCCTTAATTACTCTAACAATTTGGCATTTGA
AAGTGCGAGGCAGTGTCAGGATTGATAGTCAAAACGAAGTTCTTCAATCCTTTGATCCTCCAAA
TTAAATGTATATTCGGGTCCCTGTGATTCTGATACTTGGAGGAAATGTTCATCCACTTCCACTG
ATAACTAAACTCAAGGCTTTTCTCATTATCTGAGATGCTAAGCCACCTCCATGTACTATCAAAC
GACATTTTAGTAGATGAAAGCTGGTTAGGCCTTTCTCTAATTTCTTTCTTTCTCCCTTCTCCCC
CAATTTAAAAACATGGAAAAGCTGGCCTGGTGGCAGACGCCTTTAATCCTAGCTCTTGGGAGGC
AGAGGCAGGGAGCTCTCTCAGTTAGAGACCAGACTGGTCTACATAATAAGTTTCCAGACAGTCA
GAGGTATATAGTAAGACCTTGTCTTAAAACAGACGAACAAATCAGTATGGGAATAATCGTGATT
TTTCTTGCACACTTACTTTTCTTTGCCACTGGAGGTTAGCTCACTGGGAGACATGCATATGACT
TGTGAACTGCAGAGAGGAACTTGGTGCTGGAATAGCTATGGGGTGTTGTTCCCTTATTTTATGC
TAAAGAAGTGTGAAAATGTATTTATTTTTTTAAAACAAGACTCATGGGCCATTCATTGGTGAAA
GGAGTGTTTTGCATGTGTAGTGATCGCTAAGACACCAGTAAGAAAGAAGAAGACACAAAAGTCT
CTGTATTTTAATGTTTGAAGAATGTAGTTTATCTCGGGATGGACCTTCTCAAAGTGTACCTTGG
GGTATCAGTATAATTAATTGTTTTGATTTCACTAGTGATTGTACATGTCATTGGCCTTTGACTT
CAGAAAGAAAAAAAAAAACCCAACTAGGGCAGACACATAGGGAAGGAAACATCTTTGCCCAAGA
GAGTGATCTAGGATCAGTGTCAGGCTTCATGGTTTTTTTTAAGCTCCTTGGCAGGTCTCACTGT
AATATTTCCACAAAACGGTAGTGAATGGCCCTCTGAATAATAAGCAACTTTTCAAGAGCCAAAG
CATGCGGTGTGCAGCATGCTGGGACTGGAATATGGAAATTGTTTTAATTTCTTCTTTTCTCTTA
TGAGGAAGTCACTGCACTTGGTTTGTCCAGACAAGAGAGTTCATCCCCTGTATCGAAACAGTGA
TGAATCAAAACATGTTGGAGCAAGTTTTAAAAAATCAAAATTAAACTGGTTTCTCTTAAATAGC
TTAAAGCTTTCCACAGTACAAAATAAATTAAGCATTGTAAAATGAAATTAATTCAAGTAATCAC
TCAGTACAGAAGTCTAAGCATATATATCATCAGTCTTGTAATTCCAGGGTATAATTAAATTCTC
AGAAATCTGCTAAATTCCTCCTAATTTGGTTTCTATATACATTTAACAAGACAGAGAGCAAATG
TTTGTTAATCTGTAGCATGCCAAAGAGAATGTGGGTGAAGTTGTCTTCTAATTGCGGGGGCCTT
TCAGACTGGGCTTGAAATGTGTCTGGGTAAGGCTCATCTGTAGCACCTTATCCCCACACTACAT
TAAAGTTTCCATAACCATTCTGACCAGAGACTGAATTTTTGTTTATTGAAGTAAAATCAGTAAA
ACTATGCAATTGCCTCTGACTGGTGCTAATAGGTGCTAATTTGGCAGATTCTCAGACTGACTTT
CAAGGTGGAATTAGATACTACCAAAATCTCCAGGAGAGCTCTGGTCCTCTCATGTAAGTACCTT
TAATAAACTCAATGTCCACAGAATAAAACCACTTTTGTAATGAAAATGTACCTGTTCCATGAAT
AAATATTTGGATTTTGTGAATTTAAA

hide sequence

RefSeq Acc Id:

XM_039105700 ⟹ XP_038961628

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	144,812,577 - 144,849,468 (+)	NCBI
mRatBN7.2	3	124,359,909 - 124,396,797 (+)	NCBI

RefSeq Acc Id:

XM_039105701 ⟹ XP_038961629

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	144,673,823 - 144,845,278 (+)	NCBI
mRatBN7.2	3	124,221,136 - 124,392,596 (+)	NCBI

RefSeq Acc Id:

XM_063284381 ⟹ XP_063140451

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	144,673,823 - 144,729,665 (+)	NCBI

RefSeq Acc Id:

XM_063284382 ⟹ XP_063140452

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	144,672,898 - 144,849,468 (+)	NCBI

RefSeq Acc Id:

XM_063284383 ⟹ XP_063140453

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	144,789,965 - 144,849,468 (+)	NCBI

RefSeq Acc Id:

XM_063284384 ⟹ XP_063140454

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	144,673,823 - 144,849,468 (+)	NCBI

RefSeq Acc Id:

XM_063284385 ⟹ XP_063140455

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	144,673,823 - 144,845,919 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001258249	(Get FASTA)	NCBI Sequence Viewer
	XP_008760477	(Get FASTA)	NCBI Sequence Viewer
	XP_008760478	(Get FASTA)	NCBI Sequence Viewer
	XP_008760479	(Get FASTA)	NCBI Sequence Viewer
	XP_008760481	(Get FASTA)	NCBI Sequence Viewer
	XP_008760482	(Get FASTA)	NCBI Sequence Viewer
	XP_008760483	(Get FASTA)	NCBI Sequence Viewer
	XP_017447477	(Get FASTA)	NCBI Sequence Viewer
	XP_038961628	(Get FASTA)	NCBI Sequence Viewer
	XP_038961629	(Get FASTA)	NCBI Sequence Viewer
	XP_063140451	(Get FASTA)	NCBI Sequence Viewer
	XP_063140452	(Get FASTA)	NCBI Sequence Viewer
	XP_063140453	(Get FASTA)	NCBI Sequence Viewer
	XP_063140454	(Get FASTA)	NCBI Sequence Viewer
	XP_063140455	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL80307	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000065685
	ENSRNOP00000065685.3
	ENSRNOP00000069652.2
	ENSRNOP00000086516.1
	ENSRNOP00000087503
	ENSRNOP00000087503.2
	ENSRNOP00000112579
	ENSRNOP00000112579.1

RefSeq Acc Id:

NP_001258249 ⟸ NM_001271320

- UniProtKB:

M0R893 (UniProtKB/TrEMBL), A0A8I6AGP4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASKKFVIKCGNFAVLVDLHVLPQGSNKDSSWFSEQKKEEVCLLLKETIDSRVKEYVGIYKQHR
PSTAEFSRSSPLSLKGYGFQITAYFIRRGIHLRCIQSSRNTELRIFPESFVVCVSQLAFGHDTW
ANQNEKSTQRALHGASDYFAQCAESSPPPGIKLKRNTLKEIVRRAESKGTDVSKPQTSRDLVGK
SSDSVITVVPRRRDASAILLSEPVGQAQDDIRAAKSHQELPVQKLENVSQTQPGDTRSQQQLHP
GEWLKTGLLSRSPVYNYESASPGPKQSPRAAKTQQKRRNCGSVEDSDHRRRVSLGNEGLVPEDS
VVETSTAVRVLPALELSNPGLLLKQDLAKATAKEELHALENLSSRHLVTDNPGQARPTGSATVT
ERLAPVQSGPSKKRKKLQSSSRGCSGKKS

hide sequence

RefSeq Acc Id:	XP_008760477 ⟸ XM_008762255
- Peptide Label:	isoform X1
- UniProtKB:	M0R893 (UniProtKB/TrEMBL), A0A8I6AGP4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASKKFVIKCGNFAVLVDLHVLPQGSNKDSSWFSEQKKEEVCLLLKETIDSRVKEYVGIYKQHR PSTAEFSRSSPLSLKGYGFQITAYFIRRGIHLRCIQSSRNTELRIFPESFVVCVSQLAFGHDTW ANQNEKSTQRALHGASDYFAQCAESSPPPGIKLKRNTLKEIVRRAESKGTDVSKPQTSRDLVGK SSDSVITVVPRRRDASAILLSEPVGQAQDDIRAAKSHQELPVQKLENVSQTQPGDTRSQQQLHP GEWLKTGLLSRSPVYNYESASPGPKQSPRAAKTQQKRRNCGSVEDSDHRRRVSLGNEGLVPEDS VVETSTAVRVLPALELSNPGLLLKQDLAKATAKEELHALENLSSRHLVTDNPGQARPTGSATVT ERLAPVQSGPSKKRKKLQSSSRGCSGKKS hide sequence

RefSeq Acc Id:	XP_008760478 ⟸ XM_008762256
- Peptide Label:	isoform X1
- UniProtKB:	M0R893 (UniProtKB/TrEMBL), A0A8I6AGP4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASKKFVIKCGNFAVLVDLHVLPQGSNKDSSWFSEQKKEEVCLLLKETIDSRVKEYVGIYKQHR PSTAEFSRSSPLSLKGYGFQITAYFIRRGIHLRCIQSSRNTELRIFPESFVVCVSQLAFGHDTW ANQNEKSTQRALHGASDYFAQCAESSPPPGIKLKRNTLKEIVRRAESKGTDVSKPQTSRDLVGK SSDSVITVVPRRRDASAILLSEPVGQAQDDIRAAKSHQELPVQKLENVSQTQPGDTRSQQQLHP GEWLKTGLLSRSPVYNYESASPGPKQSPRAAKTQQKRRNCGSVEDSDHRRRVSLGNEGLVPEDS VVETSTAVRVLPALELSNPGLLLKQDLAKATAKEELHALENLSSRHLVTDNPGQARPTGSATVT ERLAPVQSGPSKKRKKLQSSSRGCSGKKS hide sequence

RefSeq Acc Id:	XP_008760483 ⟸ XM_008762261
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6A5H1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASKKFVIKCGNFAVLVDLHVLPQGSNKDSSWFSEQKKEAMAFRSQLISSGEGYTFAVSRAPGI QNFVYFLRALWCVLVSLHLVMILGQTRMKSRVRRAESKGTDVSKPQTSRDLVGKSSDSVITVVP RRRDASAILLSEPVGQAQDDIRAAKSHQELPVQKLENVSQTQPGDTRSQQQLHPGEWLKTGLLS RSPVYNYESASPGPKQSPRAAKTQQKRRNCGSVEDSDHRRRVSLGNEGLVPEDSVVETSTAVRV LPALELSNPGLLLKQDLAKATAKEELHALENLSSRHLVTDNPGQARPTGSATVTERLAPVQSGP SKKRKKLQSSSRGCSGKKS hide sequence

RefSeq Acc Id:	XP_008760479 ⟸ XM_008762257
- Peptide Label:	isoform X1
- UniProtKB:	M0R893 (UniProtKB/TrEMBL), A0A8I6AGP4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASKKFVIKCGNFAVLVDLHVLPQGSNKDSSWFSEQKKEEVCLLLKETIDSRVKEYVGIYKQHR PSTAEFSRSSPLSLKGYGFQITAYFIRRGIHLRCIQSSRNTELRIFPESFVVCVSQLAFGHDTW ANQNEKSTQRALHGASDYFAQCAESSPPPGIKLKRNTLKEIVRRAESKGTDVSKPQTSRDLVGK SSDSVITVVPRRRDASAILLSEPVGQAQDDIRAAKSHQELPVQKLENVSQTQPGDTRSQQQLHP GEWLKTGLLSRSPVYNYESASPGPKQSPRAAKTQQKRRNCGSVEDSDHRRRVSLGNEGLVPEDS VVETSTAVRVLPALELSNPGLLLKQDLAKATAKEELHALENLSSRHLVTDNPGQARPTGSATVT ERLAPVQSGPSKKRKKLQSSSRGCSGKKS hide sequence

RefSeq Acc Id:	XP_008760481 ⟸ XM_008762259
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AGP4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFAVSSISADASSTPVLKQLFTVLTLTFHVIECAPRASLRIHLEKNKCYGRSHACYGFQITAYF IRRGIHLRCIQSSRNTELRIFPESFVVCVSQLAFGHDTWANQNEKSTQRALHGASDYFAQCAES SPPPGIKLKRNTLKEIVRRAESKGTDVSKPQTSRDLVGKSSDSVITVVPRRRDASAILLSEPVG QAQDDIRAAKSHQELPVQKLENVSQTQPGDTRSQQQLHPGEWLKTGLLSRSPVYNYESASPGPK QSPRAAKTQQKRRNCGSVEDSDHRRRVSLGNEGLVPEDSVVETSTAVRVLPALELSNPGLLLKQ DLAKATAKEELHALENLSSRHLVTDNPGQARPTGSATVTERLAPVQSGPSKKRKKLQSSSRGCS GKKS hide sequence

RefSeq Acc Id:	XP_008760482 ⟸ XM_008762260
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6AGP4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGRAGSGRSLWLSGRQPSLLDTTKKLGLKEQGYGFQITAYFIRRGIHLRCIQSSRNTELRIFPE SFVVCVSQLAFGHDTWANQNEKSTQRALHGASDYFAQCAESSPPPGIKLKRNTLKEIVRRAESK GTDVSKPQTSRDLVGKSSDSVITVVPRRRDASAILLSEPVGQAQDDIRAAKSHQELPVQKLENV SQTQPGDTRSQQQLHPGEWLKTGLLSRSPVYNYESASPGPKQSPRAAKTQQKRRNCGSVEDSDH RRRVSLGNEGLVPEDSVVETSTAVRVLPALELSNPGLLLKQDLAKATAKEELHALENLSSRHLV TDNPGQARPTGSATVTERLAPVQSGPSKKRKKLQSSSRGCSGKKS hide sequence

RefSeq Acc Id:	XP_017447477 ⟸ XM_017591988
- Peptide Label:	isoform X1
- UniProtKB:	M0R893 (UniProtKB/TrEMBL), A0A8I6AGP4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASKKFVIKCGNFAVLVDLHVLPQGSNKDSSWFSEQKKEEVCLLLKETIDSRVKEYVGIYKQHR PSTAEFSRSSPLSLKGYGFQITAYFIRRGIHLRCIQSSRNTELRIFPESFVVCVSQLAFGHDTW ANQNEKSTQRALHGASDYFAQCAESSPPPGIKLKRNTLKEIVRRAESKGTDVSKPQTSRDLVGK SSDSVITVVPRRRDASAILLSEPVGQAQDDIRAAKSHQELPVQKLENVSQTQPGDTRSQQQLHP GEWLKTGLLSRSPVYNYESASPGPKQSPRAAKTQQKRRNCGSVEDSDHRRRVSLGNEGLVPEDS VVETSTAVRVLPALELSNPGLLLKQDLAKATAKEELHALENLSSRHLVTDNPGQARPTGSATVT ERLAPVQSGPSKKRKKLQSSSRGCSGKKS hide sequence

Ensembl Acc Id:

ENSRNOP00000065685 ⟸ ENSRNOT00000070972

Ensembl Acc Id:

ENSRNOP00000009743 ⟸ ENSRNOT00000009743

RefSeq Acc Id:	XP_038961629 ⟸ XM_039105701
- Peptide Label:	isoform X8
- UniProtKB:	A6HQK6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038961628 ⟸ XM_039105700
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6A5H1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000086516 ⟸ ENSRNOT00000118214

Ensembl Acc Id:

ENSRNOP00000087503 ⟸ ENSRNOT00000109869

RefSeq Acc Id:	XP_063140452 ⟸ XM_063284382
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6A5H1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140454 ⟸ XM_063284384
- Peptide Label:	isoform X8
- UniProtKB:	A6HQK6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140455 ⟸ XM_063284385
- Peptide Label:	isoform X8
- UniProtKB:	A6HQK6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140451 ⟸ XM_063284381
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2JVX1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140453 ⟸ XM_063284383
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6A5H1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000112579 ⟸ ENSRNOT00000136744

Protein Domains

L1 transposable element dsRBD-like L1 transposable element RRM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0R893-F1-model_v2	AlphaFold	M0R893	1-426	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692466

Promoter ID:

EPDNEW_R2990

Type:

initiation region

Name:

Slx4ip_1

Description:

SLX4 interacting protein

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	129,885,883 - 129,885,943	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1563120	AgrOrtholog
BioCyc Gene	G2FUF-47712	BioCyc
Ensembl Genes	ENSRNOG00000007430	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSRNOG00000054780	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000070972	ENTREZGENE
	ENSRNOT00000070972.4	UniProtKB/TrEMBL
	ENSRNOT00000084038.3	UniProtKB/TrEMBL
	ENSRNOT00000109869	ENTREZGENE
	ENSRNOT00000109869.2	UniProtKB/TrEMBL
	ENSRNOT00000118214.2	UniProtKB/TrEMBL
	ENSRNOT00000136744	ENTREZGENE
	ENSRNOT00000136744.1	UniProtKB/TrEMBL
Gene3D-CATH	L1 transposable element, C-terminal domain	UniProtKB/TrEMBL
	L1 transposable element, RRM domain	UniProtKB/TrEMBL
	L1 transposable element, trimerization domain	UniProtKB/TrEMBL
InterPro	L1_C	UniProtKB/TrEMBL
	L1_dsRBD	UniProtKB/TrEMBL
	L1_RRM_dom	UniProtKB/TrEMBL
	SLX4IP	UniProtKB/TrEMBL
	Transposase_22	UniProtKB/TrEMBL
KEGG Report	rno:499895	UniProtKB/TrEMBL
NCBI Gene	499895	ENTREZGENE
PANTHER	L1 TRANSPOSABLE ELEMENT-RELATED	UniProtKB/TrEMBL
	PROTEIN SLX4IP	UniProtKB/TrEMBL
	PTHR28557	UniProtKB/TrEMBL
Pfam	Tnp_22_dsRBD	UniProtKB/TrEMBL
	Transposase_22	UniProtKB/TrEMBL
	UPF0492	UniProtKB/TrEMBL
PhenoGen	Slx4ip	PhenoGen
RatGTEx	ENSRNOG00000007430	RatGTEx
	ENSRNOG00000054780	RatGTEx
Superfamily-SCOP	Apolipoprotein	UniProtKB/TrEMBL
UniProt	A0A0G2JVX1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A5H1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AGP4	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0MB02_RAT	UniProtKB/TrEMBL
	A6HQK6	ENTREZGENE, UniProtKB/TrEMBL
	M0R893	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-07-29	Slx4ip	SLX4 interacting protein	LOC102549953	uncharacterized LOC102549953	Data merged from RGD:7522763	737654	PROVISIONAL
2013-12-17	LOC102549953	uncharacterized LOC102549953			Symbol and Name status set to provisional	70820	PROVISIONAL
2012-11-07	Slx4ip	SLX4 interacting protein	RGD1563120	similar to RIKEN cDNA 2210009G21	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1563120	similar to RIKEN cDNA 2210009G21	RGD1563120_predicted	similar to RIKEN cDNA 2210009G21 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1563120_predicted	similar to RIKEN cDNA 2210009G21 (predicted)	LOC499895	similar to RIKEN cDNA 2210009G21	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC499895	similar to RIKEN cDNA 2210009G21			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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