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Gene: Klhl15 (kelch-like family member 15) Rattus norvegicus

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Symbol:

Klhl15

Name:

kelch-like family member 15

RGD ID:

1563101

Description:

Predicted to enable ubiquitin-like ligase-substrate adaptor activity. Predicted to be involved in negative regulation of double-strand break repair via homologous recombination and nuclear protein quality control by the ubiquitin-proteasome system. Predicted to be part of Cul3-RING ubiquitin ligase complex. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in non-syndromic X-linked intellectual disability 103. Orthologous to human KLHL15 (kelch like family member 15); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acrylamide; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

kelch-like 15; kelch-like 15 (Drosophila); kelch-like protein 15; LOC314111; MGC189229; RGD1563101; similar to Kelch-like 15

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	KLHL15 (kelch like family member 15)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Klhl15 (kelch-like 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Klhl15 (kelch like family member 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	KLHL15 (kelch like family member 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	KLHL15 (kelch like family member 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Klhl15 (kelch like family member 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	KLHL15 (kelch like family member 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	KLHL15 (kelch like family member 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Klhl15 (kelch like family member 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Klhl15 (kelch like family member 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	TSPYL4 (TSPY like 4)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	KLHL15 (kelch like family member 15)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Klhl15 (kelch-like 15)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	klhl15 (kelch-like family member 15)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG1812	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	klhl15	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	klhl15	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	62,987,762 - 63,043,980 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	62,989,426 - 63,039,870 (+)	Ensembl				GRCr8
mRatBN7.2	X	58,994,726 - 59,050,207 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	58,995,461 - 59,046,069 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	60,434,029 - 60,484,320 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	63,935,152 - 63,985,443 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	61,486,233 - 61,536,524 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	63,342,277 - 63,390,915 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	63,343,546 - 63,389,989 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	63,938,247 - 63,988,155 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	81,629,200 - 81,679,937 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	X	59,429,136 - 59,478,975 (+)	NCBI		Celera
Cytogenetic Map	X	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

non-syndromic X-linked intellectual disability 103 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

acrylamide (EXP,ISO)

aflatoxin B1 (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

CGP 52608 (ISO)

chromium(6+) (ISO)

copper atom (EXP)

copper(0) (EXP)

crocidolite asbestos (ISO)

Dibutyl phosphate (ISO)

doxorubicin (ISO)

ethyl methanesulfonate (ISO)

formaldehyde (ISO)

iron dichloride (ISO)

maneb (ISO)

methamphetamine (EXP)

methyl methanesulfonate (ISO)

methylisothiazolinone (ISO)

naled (ISO)

okadaic acid (ISO)

paracetamol (EXP)

paraquat (ISO)

potassium chloride (ISO)

potassium chromate (ISO)

pyridaben (ISO)

SCH 23390 (EXP)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

thiram (ISO)

trichostatin A (ISO)

tungsten (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of double-strand break repair via homologous recombination (IBA,IEA,ISO,ISS)

nuclear protein quality control by the ubiquitin-proteasome system (IBA,IEA,ISO,ISS)

protein ubiquitination (IEA)

ubiquitin-dependent protein catabolic process (IEA,ISO,ISS)

Cellular Component

Cul3-RING ubiquitin ligase complex (IBA,IEA,ISO,ISS)

nucleus (IBA,IEA,ISO,ISS)

Molecular Function

protein binding (ISO)

ubiquitin-like ligase-substrate adaptor activity (IBA,IEA,ISO,ISS)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:27561354

Genomics

Comparative Map Data

Klhl15
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	62,987,762 - 63,043,980 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	62,989,426 - 63,039,870 (+)	Ensembl				GRCr8
mRatBN7.2	X	58,994,726 - 59,050,207 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	58,995,461 - 59,046,069 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	60,434,029 - 60,484,320 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	63,935,152 - 63,985,443 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	61,486,233 - 61,536,524 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	63,342,277 - 63,390,915 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	63,343,546 - 63,389,989 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	63,938,247 - 63,988,155 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	81,629,200 - 81,679,937 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	X	59,429,136 - 59,478,975 (+)	NCBI		Celera
Cytogenetic Map	X	q22	NCBI

KLHL15
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	23,983,720 - 24,027,186 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	23,983,716 - 24,027,186 (-)	Ensembl			hg38	GRCh38
GRCh37	X	24,001,837 - 24,045,303 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	23,915,884 - 23,955,224 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	X	28,123,598 - 28,167,503 (-)	NCBI		Celera
Cytogenetic Map	X	p22.11	NCBI
HuRef	X	21,746,167 - 21,788,942 (-)	NCBI		HuRef
CHM1_1	X	24,033,076 - 24,076,523 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	23,568,140 - 23,611,609 (-)	NCBI		T2T-CHM13v2.0

Klhl15
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	93,275,884 - 93,321,330 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	93,278,205 - 93,321,330 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	X	94,232,278 - 94,277,724 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	94,234,599 - 94,277,724 (+)	Ensembl			mm10	GRCm38
MGSCv37	X	91,480,269 - 91,518,854 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	X	90,487,649 - 90,526,234 (+)	NCBI		MGSCv36	mm8
Celera	X	81,157,596 - 81,195,565 (+)	NCBI		Celera
Cytogenetic Map	X	C3	NCBI
cM Map	X	41.53	NCBI

Klhl15
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955509	4,375,240 - 4,439,287 (-)	Ensembl
ChiLan1.0	NW_004955509	4,377,975 - 4,439,287 (-)	NCBI	ChiLan1.0	ChiLan1.0

KLHL15
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	25,784,838 - 25,830,079 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	25,788,223 - 25,833,461 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	16,583,117 - 16,625,029 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	23,956,827 - 23,997,742 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	23,956,827 - 23,997,742 (-)	Ensembl			panPan2	panpan1.1

KLHL15
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	19,617,629 - 19,651,076 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	19,618,569 - 19,650,728 (-)	Ensembl			canFam3	CanFam3.1
ROS_Cfam_1.0	X	19,573,214 - 19,606,694 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	19,574,030 - 19,606,676 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	19,612,048 - 19,645,468 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	19,645,464 - 19,678,906 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	19,701,687 - 19,735,087 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Klhl15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	12,562,053 - 12,605,647 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936624	552,177 - 591,578 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936624	552,220 - 593,546 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KLHL15
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	20,091,904 - 20,129,561 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	X	20,088,208 - 20,130,452 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	21,516,308 - 21,553,794 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KLHL15
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	22,497,481 - 22,499,997 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	22,460,041 - 22,497,773 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
ChlSab1.1 Ensembl	X	22,460,041 - 22,497,773 (-)	NCBI		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666056	24,330,864 - 24,379,115 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Klhl15
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624897	357,551 - 406,561 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624897	361,663 - 429,401 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Klhl15
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	X	52,189,535 - 52,236,848 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Klhl15
179 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	42
Count of miRNA genes:	41
Interacting mature miRNAs:	42
Transcripts:	ENSRNOT00000008558
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
738035	Stresp1	Stress response QTL 1	4.96	0.000011	stress-related behavior trait (VT:0010451)	defensive burying - coping	X	45182909	117740458	Rat
70221	Bp56	Blood pressure QTL 56	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	X	61035856	67175160	Rat
1598837	Memor13	Memory QTL 13	3.2		exploratory behavior trait (VT:0010471)	difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	X	44930883	89930883	Rat

Markers in Region

DXRat90

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,989,630 - 62,989,850 (+)	Marker Load Pipeline
Celera	X	59,429,328 - 59,429,519	UniSTS
RGSC_v3.1	X	81,702,501 - 81,702,819	RGD
SHRSP x BN Map	X	17.21	RGD
SHRSP x BN Map	X	17.21	UniSTS
Cytogenetic Map	X	q31	UniSTS

AU049895

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	59,001,096 - 59,001,386 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	63,348,852 - 63,349,139	NCBI	Rnor6.0
Rnor_5.0	X	63,944,078 - 63,944,365	UniSTS	Rnor5.0
RGSC_v3.4	X	81,634,136 - 81,634,423	UniSTS	RGSC3.4
Celera	X	59,434,542 - 59,434,829	UniSTS
Cytogenetic Map	X	q31	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434053	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434055	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434057	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602041	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602042	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602043	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279993	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC168930	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000008558 ⟹ ENSRNOP00000008558

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	62,989,983 - 63,039,870 (+)	Ensembl
mRatBN7.2 Ensembl	X	58,995,666 - 59,046,069 (+)	Ensembl
Rnor_6.0 Ensembl	X	63,343,751 - 63,389,989 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000076315 ⟹ ENSRNOP00000068100

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	58,995,461 - 59,010,630 (+)	Ensembl
Rnor_6.0 Ensembl	X	63,343,546 - 63,358,383 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000076530 ⟹ ENSRNOP00000068396

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	X	63,343,724 - 63,389,972 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000127526 ⟹ ENSRNOP00000100615

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	62,989,426 - 63,005,866 (+)	Ensembl

RefSeq Acc Id:

NM_001108021 ⟹ NP_001101491

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,989,439 - 63,039,842 (+)	NCBI
mRatBN7.2	X	58,995,666 - 59,046,069 (+)	NCBI
Rnor_6.0	X	63,343,751 - 63,389,989 (+)	NCBI
Rnor_5.0	X	63,938,247 - 63,988,155 (+)	NCBI
RGSC_v3.4	X	81,629,200 - 81,679,937 (+)	RGD
Celera	X	59,429,136 - 59,478,975 (+)	RGD

Sequence:

show sequence

CCCGACCCTCCCACCGTTCGGCCACTGGCCCGCTTCTTCCTGATGCAGACTGCCGTCCACTAGA
GGCTGGACAGGACCCCCGAGGTGATTCATGGCAGGGGACGTGGAAGGATTCTGTTCCTCCATCC
ATGACACCAGTGTCTCTGCTGGGTTCAGAGCACTGTATGAGGAGGGATTGCTTCTTGATGTCAC
TCTGGTTATTGAAGACCATCAGTTCCAGGCCCATAAAGCCCTCCTGGCCACCCAGAGTGATTAC
TTCAGAATTATGTTCACAGCAGATATGAGGGAACGAGATCAGGACAAAATTCATTTGAAGGGTC
TAACAGCTACTGGTTTCAGCCACGTTCTTCAGTTTATGTATTATGGAACTATAGAACTAAGTAT
GAATACTGTTCATGAAATCCTTCAGGCAGCAATGTATGTTCAGCTTATAGAAGTGGTGAAATTC
TGCTGCTCTTTTCTCTTAGCCAAAATCTGCTTAGAAAATTGTGCGGAAATTATGAGACTGTTAG
ATGATTTTGGTGTTAACATCGAGGGAGTCAGGGAGAAGCTGGATGCCTTTCTGCTAGACAACTT
CGTGCCACTCATGTCCAGGCCTGACTTCCTGTCTTATCTGAGCTTTGAGAAGCTCATGTCTTAT
TTGGATAATGATCATCTGAGCAGGTTTCCAGAAATAGAGCTGTACGAGGCTGTGCAGTCTTGGC
TGCGACATGATAGACGACGGTGGAGACACACAGATACCATCATTCAGAACATCAGGTTTTGTCT
GATGACTCCATCCAGCGTTTTTGAGAAGGTTAAAACATCAGAATTTTATAGATACTCCCGACAG
CTGCGGTATGAAGTTGACCAAGCATTGAATTACTTCCAAAATGTTCACCAGCAACCCTTGTTGG
ACATGAAATCAAGCCGTATTCGTTCTGCCAAACCCCAAACTACAGTATTCCGAGGAATGATTGG
ACATAGCATGGTTAATAGTAAAATACTCCTGTTAAAGAAACCAAGAGTCTGGTGGGAACTGGAG
GGCCCCCAAGTACCTCTAAGACCAGACTGCCTTGCCATTGTCAATAATTTTGTGTTCCTGCTAG
GTGGCGAAGAGCTGGGCCCCGATGGAGAATTCCATGCCTCTTCGAAAGTGTTCAGGTATGATCC
AAGACAAAATTCTTGGCTGCGTATGGCAGACATGTCTGTACCACGTTCAGAATTTGCTGTTGGT
GTCATTGGGAAGTTTATTTATGCTGTAGCAGGCAGAACAAGAGATGAAACTTTCTACTCAACAG
AAAGATACGATATCACTAACGATAAATGGGAATTCGTAGATCCTTATCCAGTTAACAAATATGG
ACATGAGGGGACAGTGCTCAATAACAAGTTGTTTATCACTGGAGGAATCACTTCATCTTCCACA
TCTAAACAGGTGTGTGTATTTGACCCCAGTAAAGAAGGGACCATAGAACAGCGGACCAGGAGAA
CTCAAGTGGTTACCAACTGCTGGGAGAATAAAAGCAAGATGAATTATGCTAGATGCTTTCACAA
GATGATCTCTTATAATGGCAAGCTTTATGTCTTTGGTGGTGTCTGTGTGATCTTGAGGGCCTCT
TTTGAATCTCAGGGCTGCCCTTCCACAGAGGTGTATAACCCAGATACTGATCAATGGACCATCT
TGGCATCTATGCCAATTGGTAGAAGTGGTCACGGTGTGACTGTGCTGGACAAACAAATCATGGT
CCTTGGGGGCCTTTGTTATAATGGTCATTACAGTGATTCCATTCTCACCTTTGACCCAGATGAA
AATAAGTGGAAAGAAGATGAGTACCCTCGGATGCCCTGCAAGCTGGATGGTTTACAGGTGTGCA
ACCTCCATTTTCCGGACTATGTACTGGATGAGGTTAGGCGTTGCAACTGATGACATCTTTCTCC
CTAAAAGGAAAAAGGCAAATAAAGCATTTGTGATACAGTAGTTTAAAAG

hide sequence

RefSeq Acc Id:

XM_017602041 ⟹ XP_017457530

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,988,861 - 63,043,980 (+)	NCBI
mRatBN7.2	X	58,995,224 - 59,050,207 (+)	NCBI
Rnor_6.0	X	63,343,339 - 63,390,915 (+)	NCBI

Sequence:

show sequence

GCCCCTTTCCCGCTTTCCTCCACCCCCGGCGTGGGTGATCCCGTGGCTCCGCGCGCTTTGGGGC
AGAAACCCGGAGACTCCGTCGTCTATGTCGTTACCGCTGGCGTTTCTATTGCCCTCGACCCCCT
CAGCTGTCCCCCAGTTCGTGGCCCTAAGTCGGCTCTCCCGCCGAGCCCCGTGGGGTGCCGCGAC
GTCCCTCGGACTGCTTTTAAGGGGGCCTCGGGCTTGCACGCTCGCCCCGCGCCGGAGCGCTCCG
GCCCGGCCAGGGAGCGGCCCCTTGTAGAGGTCTGAGGAGCCTATCGTGGTCCAGCCCGGCGCCC
GACCCTCCCACCGTTCGGCCACTGGCCCGCTTCTTCCTGATGCAGACTGCCGTCCACTAGAGGC
TGGACAGGACCCCCGAGTGTCCAGGGTATGGATTGTGAACAAGTTGGTTTTGTTTCACGTGTTC
ATTTGACTGTTATTTAGGACCCTTCGCTATAAGTAGAAGTCAGCTCAGGTGATTCATGGCAGGG
GACGTGGAAGGATTCTGTTCCTCCATCCATGACACCAGTGTCTCTGCTGGGTTCAGAGCACTGT
ATGAGGAGGGATTGCTTCTTGATGTCACTCTGGTTATTGAAGACCATCAGTTCCAGGCCCATAA
AGCCCTCCTGGCCACCCAGAGTGATTACTTCAGAATTATGTTCACAGCAGATATGAGGGAACGA
GATCAGGACAAAATTCATTTGAAGGGTCTAACAGCTACTGGTTTCAGCCACGTTCTTCAGTTTA
TGTATTATGGAACTATAGAACTAAGTATGAATACTGTTCATGAAATCCTTCAGGCAGCAATGTA
TGTTCAGCTTATAGAAGTGGTGAAATTCTGCTGCTCTTTTCTCTTAGCCAAAATCTGCTTAGAA
AATTGTGCGGAAATTATGAGACTGTTAGATGATTTTGGTGTTAACATCGAGGGAGTCAGGGAGA
AGCTGGATGCCTTTCTGCTAGACAACTTCGTGCCACTCATGTCCAGGCCTGACTTCCTGTCTTA
TCTGAGCTTTGAGAAGCTCATGTCTTATTTGGATAATGATCATCTGAGCAGGTTTCCAGAAATA
GAGCTGTACGAGGCTGTGCAGTCTTGGCTGCGACATGATAGACGACGGTGGAGACACACAGATA
CCATCATTCAGAACATCAGGTTTTGTCTGATGACTCCATCCAGCGTTTTTGAGAAGGTTAAAAC
ATCAGAATTTTATAGATACTCCCGACAGCTGCGGTATGAAGTTGACCAAGCATTGAATTACTTC
CAAAATGTTCACCAGCAACCCTTGTTGGACATGAAATCAAGCCGTATTCGTTCTGCCAAACCCC
AAACTACAGTATTCCGAGGAATGATTGGACATAGCATGGTTAATAGTAAAATACTCCTGTTAAA
GAAACCAAGAGTCTGGTGGGAACTGGAGGGCCCCCAAGTACCTCTAAGACCAGACTGCCTTGCC
ATTGTCAATAATTTTGTGTTCCTGCTAGGTGGCGAAGAGCTGGGCCCCGATGGAGAATTCCATG
CCTCTTCGAAAGTGTTCAGGTATGATCCAAGACAAAATTCTTGGCTGCGTATGGCAGACATGTC
TGTACCACGTTCAGAATTTGCTGTTGGTGTCATTGGGAAGTTTATTTATGCTGTAGCAGGCAGA
ACAAGAGATGAAACTTTCTACTCAACAGAAAGATACGATATCACTAACGATAAATGGGAATTCG
TAGATCCTTATCCAGTTAACAAATATGGACATGAGGGGACAGTGCTCAATAACAAGTTGTTTAT
CACTGGAGGAATCACTTCATCTTCCACATCTAAACAGGTGTGTGTATTTGACCCCAGTAAAGAA
GGGACCATAGAACAGCGGACCAGGAGAACTCAAGTGGTTACCAACTGCTGGGAGAATAAAAGCA
AGATGAATTATGCTAGATGCTTTCACAAGATGATCTCTTATAATGGCAAGCTTTATGTCTTTGG
TGGTGTCTGTGTGATCTTGAGGGCCTCTTTTGAATCTCAGGGCTGCCCTTCCACAGAGGTGTAT
AACCCAGATACTGATCAATGGACCATCTTGGCATCTATGCCAATTGGTAGAAGTGGTCACGGTG
TGACTGTGCTGGACAAACAAATCATGGTCCTTGGGGGCCTTTGTTATAATGGTCATTACAGTGA
TTCCATTCTCACCTTTGACCCAGATGAAAATAAGTGGAAAGAAGATGAGTACCCTCGGATGCCC
TGCAAGCTGGATGGTTTACAGGTGTGCAACCTCCATTTTCCGGACTATGTACTGGATGAGGTTA
GGCGTTGCAACTGATGACATCTTTCTCCCTAAAAGGAAAAAGGCAAATAAAGCATTTGTGATAC
AGTAGTTTAAAAGCATAAAGAAAAACCTCACCAGTTTTACTATCAAAGCCATTGGTCTAATATT
GTAAGTTTTCATTCTGTGCTAGCATCTTTCCTTTCAGTGGCCTCAAACTCATGCAATAAGTTCC
TTTGAAGCACTAGCTCTTGAAACTACTTCCAAAGCAGTTTATACATACACTGCTCCACTTACCC
GGGAAGTTGATCCTTCTGCTTTAAATATTTCTTTCAGATGTTAGTGTAGGATTTGTGCATCTTC
TAAGAGAAGACCCAGTAAGTGTCACTGGATTTGATTTCAGTCCCTCTGTTTGAACTCTTTGGAA
ATTATTTTAGTCTGCTATATGTTTTGGTTTATTATTTAAAAGTTTAAAACTCTTGACCTTTTTG
CATGGCTTTTTGCTGAAAATGCAAAAATTTAAATTTTTTACAAAAGTTTTTTATATCAGAACAC
TATTTCTAAGCTGCCTTCTCTTATGTGCATTGCGTTAGTGAAAGCATACCCATACTCATATACA
TCCTAGAAATATATAAGGCACACTCCTTTTATGCGTGGTTAGGATTCTATATTTTTAAGCTAGT
GCTCTTGCACAGACAGTTCGCCATACTTGTTGAAATTTAGATGTAATGTCTTTAATGTATTAAT
GTTTTTAGAAAGTTAAAATAACTGGAGTCCTCATTTGGTATCAAAGTAGTCTATCCTCTGTCCG
TACTGGTTCAGTAAAATTTGAACTCATAGTTCTGAAACATGTATGGATTTACAAAAGCTAACGT
TTGGCATTTTGTTTTCAAAACTAAGCATTAATGTTTCATGTCAATGTATGCCTTTTCTTGTTTA
AAAATGTTTTTCTTTGCAGTCTGTTTAATGTTGGTTGCCCCTTTTTAGTGAGAATCTGAGTGGT
CTGTGTCAAGCTCTGACCCTGCATCATACAAGCACTTTTAAAG

hide sequence

RefSeq Acc Id:

XM_017602042 ⟹ XP_017457531

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,987,762 - 63,043,980 (+)	NCBI
mRatBN7.2	X	58,994,726 - 59,050,207 (+)	NCBI
Rnor_6.0	X	63,342,995 - 63,390,915 (+)	NCBI

Sequence:

show sequence

CTCCCGTCCCGTGGCGCCGGAAGTGACGCGCCTGGGCTGAAAGATGGCGGCATTGGCGCTCGAC
CAGGGGGAAGGACTGCTTTTAAGGGGGCCTCGGGCTTGCACGCTCGCCCCGCGCCGGAGCGCTC
CGGCCCGGCCAGGGAGCGGCCCCTTGTAGAGGTCTGAGGAGCCTATCGTGGTCCAGCCCGGCGC
CCGACCCTCCCACCGTTCGGCCACTGGCCCGCTTCTTCCTGATGCAGACTGCCGTCCACTAGAG
GCTGGACAGGACCCCCGAGTGTCCAGGGTATGGATTGTGAACAAGTTGGTTTTGTTTCACGTGT
TCATTTGACTGTTATTTAGGACCCTTCGCTATAAGTAGAAGTCAGCTCAGGTGATTCATGGCAG
GGGACGTGGAAGGATTCTGTTCCTCCATCCATGACACCAGTGTCTCTGCTGGGTTCAGAGCACT
GTATGAGGAGGGATTGCTTCTTGATGTCACTCTGGTTATTGAAGACCATCAGTTCCAGGCCCAT
AAAGCCCTCCTGGCCACCCAGAGTGATTACTTCAGAATTATGTTCACAGCAGATATGAGGGAAC
GAGATCAGGACAAAATTCATTTGAAGGGTCTAACAGCTACTGGTTTCAGCCACGTTCTTCAGTT
TATGTATTATGGAACTATAGAACTAAGTATGAATACTGTTCATGAAATCCTTCAGGCAGCAATG
TATGTTCAGCTTATAGAAGTGGTGAAATTCTGCTGCTCTTTTCTCTTAGCCAAAATCTGCTTAG
AAAATTGTGCGGAAATTATGAGACTGTTAGATGATTTTGGTGTTAACATCGAGGGAGTCAGGGA
GAAGCTGGATGCCTTTCTGCTAGACAACTTCGTGCCACTCATGTCCAGGCCTGACTTCCTGTCT
TATCTGAGCTTTGAGAAGCTCATGTCTTATTTGGATAATGATCATCTGAGCAGGTTTCCAGAAA
TAGAGCTGTACGAGGCTGTGCAGTCTTGGCTGCGACATGATAGACGACGGTGGAGACACACAGA
TACCATCATTCAGAACATCAGGTTTTGTCTGATGACTCCATCCAGCGTTTTTGAGAAGGTTAAA
ACATCAGAATTTTATAGATACTCCCGACAGCTGCGGTATGAAGTTGACCAAGCATTGAATTACT
TCCAAAATGTTCACCAGCAACCCTTGTTGGACATGAAATCAAGCCGTATTCGTTCTGCCAAACC
CCAAACTACAGTATTCCGAGGAATGATTGGACATAGCATGGTTAATAGTAAAATACTCCTGTTA
AAGAAACCAAGAGTCTGGTGGGAACTGGAGGGCCCCCAAGTACCTCTAAGACCAGACTGCCTTG
CCATTGTCAATAATTTTGTGTTCCTGCTAGGTGGCGAAGAGCTGGGCCCCGATGGAGAATTCCA
TGCCTCTTCGAAAGTGTTCAGGTATGATCCAAGACAAAATTCTTGGCTGCGTATGGCAGACATG
TCTGTACCACGTTCAGAATTTGCTGTTGGTGTCATTGGGAAGTTTATTTATGCTGTAGCAGGCA
GAACAAGAGATGAAACTTTCTACTCAACAGAAAGATACGATATCACTAACGATAAATGGGAATT
CGTAGATCCTTATCCAGTTAACAAATATGGACATGAGGGGACAGTGCTCAATAACAAGTTGTTT
ATCACTGGAGGAATCACTTCATCTTCCACATCTAAACAGGTGTGTGTATTTGACCCCAGTAAAG
AAGGGACCATAGAACAGCGGACCAGGAGAACTCAAGTGGTTACCAACTGCTGGGAGAATAAAAG
CAAGATGAATTATGCTAGATGCTTTCACAAGATGATCTCTTATAATGGCAAGCTTTATGTCTTT
GGTGGTGTCTGTGTGATCTTGAGGGCCTCTTTTGAATCTCAGGGCTGCCCTTCCACAGAGGTGT
ATAACCCAGATACTGATCAATGGACCATCTTGGCATCTATGCCAATTGGTAGAAGTGGTCACGG
TGTGACTGTGCTGGACAAACAAATCATGGTCCTTGGGGGCCTTTGTTATAATGGTCATTACAGT
GATTCCATTCTCACCTTTGACCCAGATGAAAATAAGTGGAAAGAAGATGAGTACCCTCGGATGC
CCTGCAAGCTGGATGGTTTACAGGTGTGCAACCTCCATTTTCCGGACTATGTACTGGATGAGGT
TAGGCGTTGCAACTGATGACATCTTTCTCCCTAAAAGGAAAAAGGCAAATAAAGCATTTGTGAT
ACAGTAGTTTAAAAGCATAAAGAAAAACCTCACCAGTTTTACTATCAAAGCCATTGGTCTAATA
TTGTAAGTTTTCATTCTGTGCTAGCATCTTTCCTTTCAGTGGCCTCAAACTCATGCAATAAGTT
CCTTTGAAGCACTAGCTCTTGAAACTACTTCCAAAGCAGTTTATACATACACTGCTCCACTTAC
CCGGGAAGTTGATCCTTCTGCTTTAAATATTTCTTTCAGATGTTAGTGTAGGATTTGTGCATCT
TCTAAGAGAAGACCCAGTAAGTGTCACTGGATTTGATTTCAGTCCCTCTGTTTGAACTCTTTGG
AAATTATTTTAGTCTGCTATATGTTTTGGTTTATTATTTAAAAGTTTAAAACTCTTGACCTTTT
TGCATGGCTTTTTGCTGAAAATGCAAAAATTTAAATTTTTTACAAAAGTTTTTTATATCAGAAC
ACTATTTCTAAGCTGCCTTCTCTTATGTGCATTGCGTTAGTGAAAGCATACCCATACTCATATA
CATCCTAGAAATATATAAGGCACACTCCTTTTATGCGTGGTTAGGATTCTATATTTTTAAGCTA
GTGCTCTTGCACAGACAGTTCGCCATACTTGTTGAAATTTAGATGTAATGTCTTTAATGTATTA
ATGTTTTTAGAAAGTTAAAATAACTGGAGTCCTCATTTGGTATCAAAGTAGTCTATCCTCTGTC
CGTACTGGTTCAGTAAAATTTGAACTCATAGTTCTGAAACATGTATGGATTTACAAAAGCTAAC
GTTTGGCATTTTGTTTTCAAAACTAAGCATTAATGTTTCATGTCAATGTATGCCTTTTCTTGTT
TAAAAATGTTTTTCTTTGCAGTCTGTTTAATGTTGGTTGCCCCTTTTTAGTGAGAATCTGAGTG
GTCTGTGTCAAGCTCTGACCCTGCATCATACAAGCACTTTTAAAG

hide sequence

RefSeq Acc Id:

XM_039099705 ⟹ XP_038955633

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,988,861 - 63,043,980 (+)	NCBI
mRatBN7.2	X	58,995,780 - 59,050,207 (+)	NCBI

RefSeq Acc Id:

XM_039099706 ⟹ XP_038955634

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,988,860 - 63,043,980 (+)	NCBI
mRatBN7.2	X	58,995,780 - 59,050,207 (+)	NCBI

RefSeq Acc Id:

XM_063279992 ⟹ XP_063136062

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,988,862 - 63,043,980 (+)	NCBI

RefSeq Acc Id:

XM_063279993 ⟹ XP_063136063

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,988,861 - 63,043,980 (+)	NCBI

RefSeq Acc Id:

XM_063279994 ⟹ XP_063136064

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,988,860 - 63,043,980 (+)	NCBI

RefSeq Acc Id:

XM_063279995 ⟹ XP_063136065

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,987,762 - 63,043,980 (+)	NCBI

RefSeq Acc Id:

XM_063279996 ⟹ XP_063136066

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,988,861 - 63,043,980 (+)	NCBI

RefSeq Acc Id:

XM_063279997 ⟹ XP_063136067

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,988,860 - 63,043,980 (+)	NCBI

RefSeq Acc Id:

XM_063279998 ⟹ XP_063136068

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,988,860 - 63,043,980 (+)	NCBI

RefSeq Acc Id:

XM_063279999 ⟹ XP_063136069

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,988,289 - 63,043,980 (+)	NCBI

RefSeq Acc Id:

XM_063280000 ⟹ XP_063136070

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,987,762 - 63,043,980 (+)	NCBI

RefSeq Acc Id:

XM_063280001 ⟹ XP_063136071

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,988,862 - 63,043,980 (+)	NCBI

RefSeq Acc Id:

XM_063280002 ⟹ XP_063136072

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	63,011,108 - 63,043,980 (+)	NCBI

RefSeq Acc Id:

XM_063280003 ⟹ XP_063136073

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,988,841 - 63,009,806 (+)	NCBI

RefSeq Acc Id:

XM_063280004 ⟹ XP_063136074

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,988,857 - 63,011,226 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101491	(Get FASTA)	NCBI Sequence Viewer
	NP_001420981	(Get FASTA)	NCBI Sequence Viewer
	NP_001420982	(Get FASTA)	NCBI Sequence Viewer
	NP_001420983	(Get FASTA)	NCBI Sequence Viewer
	NP_001420984	(Get FASTA)	NCBI Sequence Viewer
	NP_001420986	(Get FASTA)	NCBI Sequence Viewer
	NP_001420987	(Get FASTA)	NCBI Sequence Viewer
	XP_017457530	(Get FASTA)	NCBI Sequence Viewer
	XP_017457531	(Get FASTA)	NCBI Sequence Viewer
	XP_038955633	(Get FASTA)	NCBI Sequence Viewer
	XP_038955634	(Get FASTA)	NCBI Sequence Viewer
	XP_063136062	(Get FASTA)	NCBI Sequence Viewer
	XP_063136063	(Get FASTA)	NCBI Sequence Viewer
	XP_063136064	(Get FASTA)	NCBI Sequence Viewer
	XP_063136065	(Get FASTA)	NCBI Sequence Viewer
	XP_063136066	(Get FASTA)	NCBI Sequence Viewer
	XP_063136067	(Get FASTA)	NCBI Sequence Viewer
	XP_063136068	(Get FASTA)	NCBI Sequence Viewer
	XP_063136069	(Get FASTA)	NCBI Sequence Viewer
	XP_063136070	(Get FASTA)	NCBI Sequence Viewer
	XP_063136071	(Get FASTA)	NCBI Sequence Viewer
	XP_063136072	(Get FASTA)	NCBI Sequence Viewer
	XP_063136073	(Get FASTA)	NCBI Sequence Viewer
	XP_063136074	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	D3ZA50	(Get FASTA)	NCBI Sequence Viewer
	EDL96006	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000008558
	ENSRNOP00000008558.5

RefSeq Acc Id:

NP_001101491 ⟸ NM_001108021

- UniProtKB:

D3ZA50 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAGDVEGFCSSIHDTSVSAGFRALYEEGLLLDVTLVIEDHQFQAHKALLATQSDYFRIMFTADM
RERDQDKIHLKGLTATGFSHVLQFMYYGTIELSMNTVHEILQAAMYVQLIEVVKFCCSFLLAKI
CLENCAEIMRLLDDFGVNIEGVREKLDAFLLDNFVPLMSRPDFLSYLSFEKLMSYLDNDHLSRF
PEIELYEAVQSWLRHDRRRWRHTDTIIQNIRFCLMTPSSVFEKVKTSEFYRYSRQLRYEVDQAL
NYFQNVHQQPLLDMKSSRIRSAKPQTTVFRGMIGHSMVNSKILLLKKPRVWWELEGPQVPLRPD
CLAIVNNFVFLLGGEELGPDGEFHASSKVFRYDPRQNSWLRMADMSVPRSEFAVGVIGKFIYAV
AGRTRDETFYSTERYDITNDKWEFVDPYPVNKYGHEGTVLNNKLFITGGITSSSTSKQVCVFDP
SKEGTIEQRTRRTQVVTNCWENKSKMNYARCFHKMISYNGKLYVFGGVCVILRASFESQGCPST
EVYNPDTDQWTILASMPIGRSGHGVTVLDKQIMVLGGLCYNGHYSDSILTFDPDENKWKEDEYP
RMPCKLDGLQVCNLHFPDYVLDEVRRCN

hide sequence

RefSeq Acc Id:	XP_017457531 ⟸ XM_017602042
- Peptide Label:	isoform X1
- UniProtKB:	D3ZA50 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGDVEGFCSSIHDTSVSAGFRALYEEGLLLDVTLVIEDHQFQAHKALLATQSDYFRIMFTADM RERDQDKIHLKGLTATGFSHVLQFMYYGTIELSMNTVHEILQAAMYVQLIEVVKFCCSFLLAKI CLENCAEIMRLLDDFGVNIEGVREKLDAFLLDNFVPLMSRPDFLSYLSFEKLMSYLDNDHLSRF PEIELYEAVQSWLRHDRRRWRHTDTIIQNIRFCLMTPSSVFEKVKTSEFYRYSRQLRYEVDQAL NYFQNVHQQPLLDMKSSRIRSAKPQTTVFRGMIGHSMVNSKILLLKKPRVWWELEGPQVPLRPD CLAIVNNFVFLLGGEELGPDGEFHASSKVFRYDPRQNSWLRMADMSVPRSEFAVGVIGKFIYAV AGRTRDETFYSTERYDITNDKWEFVDPYPVNKYGHEGTVLNNKLFITGGITSSSTSKQVCVFDP SKEGTIEQRTRRTQVVTNCWENKSKMNYARCFHKMISYNGKLYVFGGVCVILRASFESQGCPST EVYNPDTDQWTILASMPIGRSGHGVTVLDKQIMVLGGLCYNGHYSDSILTFDPDENKWKEDEYP RMPCKLDGLQVCNLHFPDYVLDEVRRCN hide sequence

RefSeq Acc Id:

XP_017457530 ⟸ XM_017602041

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAGDVEGFCSSIHDTSVSAGFRALYEEGLLLDVTLVIEDHQFQAHKALLATQSDYFRIMFTADM
RERDQDKIHLKGLTATGFSHVLQFMYYGTIELSMNTVHEILQAAMYVQLIEVVKFCCSFLLAKI
CLENCAEIMRLLDDFGVNIEGVREKLDAFLLDNFVPLMSRPDFLSYLSFEKLMSYLDNDHLSRF
PEIELYEAVQSWLRHDRRRWRHTDTIIQNIRFCLMTPSSVFEKVKTSEFYRYSRQLRYEVDQAL
NYFQNVHQQPLLDMKSSRIRSAKPQTTVFRGMIGHSMVNSKILLLKKPRVWWELEGPQVPLRPD
CLAIVNNFVFLLGGEELGPDGEFHASSKVFRYDPRQNSWLRMADMSVPRSEFAVGVIGKFIYAV
AGRTRDETFYSTERYDITNDKWEFVDPYPVNKYGHEGTVLNNKLFITGGITSSSTSKQVCVFDP
SKEGTIEQRTRRTQVVTNCWENKSKMNYARCFHKMISYNGKLYVFGGVCVILRASFESQGCPST
EVYNPDTDQWTILASMPIGRSGHGVTVLDKQIMVLGGLCYNGHYSDSILTFDPDENKWKEDEYP
RMPCKLDGLQVCNLHFPDYVLDEVRRCN

hide sequence

Ensembl Acc Id:

ENSRNOP00000008558 ⟸ ENSRNOT00000008558

Ensembl Acc Id:

ENSRNOP00000068100 ⟸ ENSRNOT00000076315

Ensembl Acc Id:

ENSRNOP00000068396 ⟸ ENSRNOT00000076530

RefSeq Acc Id:	XP_038955633 ⟸ XM_039099705
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038955634 ⟸ XM_039099706
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063136070 ⟸ XM_063280000
- Peptide Label:	isoform X1
- UniProtKB:	D3ZA50 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063136065 ⟸ XM_063279995
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063136069 ⟸ XM_063279999
- Peptide Label:	isoform X1
- UniProtKB:	D3ZA50 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063136073 ⟸ XM_063280003
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063136074 ⟸ XM_063280004
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063136064 ⟸ XM_063279994
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063136067 ⟸ XM_063279997
- Peptide Label:	isoform X1
- UniProtKB:	D3ZA50 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063136068 ⟸ XM_063279998
- Peptide Label:	isoform X1
- UniProtKB:	D3ZA50 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063136066 ⟸ XM_063279996
- Peptide Label:	isoform X1
- UniProtKB:	D3ZA50 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063136063 ⟸ XM_063279993
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063136071 ⟸ XM_063280001
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063136062 ⟸ XM_063279992
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063136072 ⟸ XM_063280002
- Peptide Label:	isoform X3

Ensembl Acc Id:

ENSRNOP00000100615 ⟸ ENSRNOT00000127526

Protein Domains

BACK BTB

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZA50-F1-model_v2	AlphaFold	D3ZA50	1-604	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1563101	AgrOrtholog
BioCyc Gene	G2FUF-2243	BioCyc
Ensembl Genes	ENSRNOG00000006515	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000008558	ENTREZGENE
	ENSRNOT00000008558.6	UniProtKB/Swiss-Prot
Gene3D-CATH	1.25.40.420	UniProtKB/Swiss-Prot
	2.120.10.80	UniProtKB/Swiss-Prot
	Potassium Channel Kv1.1, Chain A	UniProtKB/Swiss-Prot
InterPro	BACK	UniProtKB/Swiss-Prot
	BTB-kelch_protein	UniProtKB/Swiss-Prot
	BTB/POZ_dom	UniProtKB/Swiss-Prot
	Kelch-typ_b-propeller	UniProtKB/Swiss-Prot
	Kelch_1	UniProtKB/Swiss-Prot
	KLHL15	UniProtKB/Swiss-Prot
	KLHL15_BACK	UniProtKB/Swiss-Prot
	SKP1/BTB/POZ_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:314111	UniProtKB/Swiss-Prot
NCBI Gene	314111	ENTREZGENE
PANTHER	LD33804P	UniProtKB/Swiss-Prot
	PTHR45632:SF12	UniProtKB/Swiss-Prot
Pfam	BACK	UniProtKB/Swiss-Prot
	BTB	UniProtKB/Swiss-Prot
	Kelch_1	UniProtKB/Swiss-Prot
	Kelch_6	UniProtKB/Swiss-Prot
PhenoGen	Klhl15	PhenoGen
PIRSF	Kelch-like_protein_gigaxonin	UniProtKB/Swiss-Prot
PROSITE	BTB	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000006515	RatGTEx
SMART	BACK	UniProtKB/Swiss-Prot
	BTB	UniProtKB/Swiss-Prot
	Kelch	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF117281	UniProtKB/Swiss-Prot
	SSF54695	UniProtKB/Swiss-Prot
UniProt	A0ABK0LGJ3_RAT	UniProtKB/TrEMBL
	D3ZA50	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-02-06	Klhl15	kelch-like family member 15	Klhl15	kelch-like 15 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Klhl15	kelch-like 15 (Drosophila)	Klhl15_predicted	kelch-like 15 (Drosophila) (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Klhl15_predicted	kelch-like 15 (Drosophila) (predicted)	RGD1563101_predicted	similar to Kelch-like 15 (predicted)	Symbol and Name updated	1299863	APPROVED
2006-03-07	RGD1563101_predicted	similar to Kelch-like 15 (predicted)	LOC314111	similar to Kelch-like 15	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC314111	similar to Kelch-like 15			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

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