Abhd12 (abhydrolase domain containing 12, lysophospholipase) - Rat Genome Database

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Gene: Abhd12 (abhydrolase domain containing 12, lysophospholipase) Rattus norvegicus
Analyze
Symbol: Abhd12
Name: abhydrolase domain containing 12, lysophospholipase
RGD ID: 1562570
Description: Predicted to enable lipase activity and palmitoyl-(protein) hydrolase activity. Predicted to be involved in monoacylglycerol catabolic process; phosphatidylserine catabolic process; and regulation of inflammatory response. Predicted to act upstream of or within adult walking behavior and response to auditory stimulus. Predicted to be located in dendrite cytoplasm and membrane. Predicted to be part of AMPA glutamate receptor complex. Predicted to be active in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in PHARC syndrome. Orthologous to human ABHD12 (abhydrolase domain containing 12, lysophospholipase); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 2-arachidonoylglycerol hydrolase; 2-arachidonoylglycerol hydrolase ABHD12; abhydrolase domain containing 12; abhydrolase domain-containing protein 12; LOC499913; lysophosphatidylserine lipase ABHD12; monoacylglycerol lipase ABHD12; oxidized phosphatidylserine lipase ABHD12; similar to Protein C20orf22 homolog
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83160,119,724 - 160,179,959 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3160,119,724 - 160,179,969 (-)EnsemblGRCr8
mRatBN7.23139,659,315 - 139,719,529 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3139,659,317 - 139,719,564 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3143,555,512 - 143,615,810 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03152,139,257 - 152,199,551 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03149,887,789 - 149,948,059 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03146,630,298 - 146,690,375 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3146,630,299 - 146,690,375 (-)Ensemblrn6Rnor6.0
Rnor_5.03152,989,211 - 153,051,233 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43141,468,888 - 141,530,219 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3138,421,060 - 138,481,137 (-)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:18096503   PMID:22632720   PMID:22969151   PMID:23297193   PMID:25290914   PMID:25580854   PMID:27307232   PMID:30237167   PMID:30643283  


Genomics

Comparative Map Data
Abhd12
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83160,119,724 - 160,179,959 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3160,119,724 - 160,179,969 (-)EnsemblGRCr8
mRatBN7.23139,659,315 - 139,719,529 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3139,659,317 - 139,719,564 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3143,555,512 - 143,615,810 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03152,139,257 - 152,199,551 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03149,887,789 - 149,948,059 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03146,630,298 - 146,690,375 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3146,630,299 - 146,690,375 (-)Ensemblrn6Rnor6.0
Rnor_5.03152,989,211 - 153,051,233 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43141,468,888 - 141,530,219 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3138,421,060 - 138,481,137 (-)NCBICelera
Cytogenetic Map3q41NCBI
ABHD12
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382025,294,743 - 25,390,835 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2025,294,742 - 25,390,866 (-)Ensemblhg38GRCh38
GRCh372025,275,379 - 25,371,471 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362025,223,379 - 25,319,477 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342025,223,379 - 25,319,454NCBI
Celera2025,349,117 - 25,445,220 (-)NCBICelera
Cytogenetic Map20p11.21NCBI
HuRef2025,232,725 - 25,328,525 (-)NCBIHuRef
CHM1_12025,276,265 - 25,320,544 (-)NCBICHM1_1
T2T-CHM13v2.02025,359,833 - 25,455,939 (-)NCBIT2T-CHM13v2.0
Abhd12
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392150,674,413 - 150,746,705 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2150,674,413 - 150,746,661 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm382150,832,493 - 150,904,779 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2150,832,493 - 150,904,741 (-)Ensemblmm10GRCm38
MGSCv372150,658,251 - 150,730,467 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv362150,523,934 - 150,534,011 (-)NCBIMGSCv36mm8
Celera2152,065,897 - 152,137,905 (-)NCBICelera
Cytogenetic Map2G3NCBI
cM Map274.74NCBI
Abhd12
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541531,284,947 - 31,337,160 (-)Ensembl
ChiLan1.0NW_00495541531,284,947 - 31,337,703 (-)NCBIChiLan1.0ChiLan1.0
ABHD12
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22126,170,550 - 26,266,837 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12026,167,384 - 26,263,661 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02025,239,710 - 25,335,941 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12025,644,824 - 25,741,073 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2025,645,046 - 25,740,943 (-)EnsemblpanPan2panpan1.1
ABHD12
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1231,496,183 - 1,562,738 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl231,496,551 - 1,562,688 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha231,525,725 - 1,592,232 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0231,736,578 - 1,803,088 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl231,736,578 - 1,803,125 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1231,577,308 - 1,643,795 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0231,701,920 - 1,768,413 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0231,669,411 - 1,735,944 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Abhd12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640147,030,881 - 147,110,895 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936620451,174 - 531,454 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936620451,216 - 531,353 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ABHD12
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1730,997,479 - 31,056,312 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11730,997,477 - 31,056,307 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
LOC103247036
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_0236660787,726,486 - 7,748,675 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Abhd12
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624939213,007 - 273,786 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624939212,910 - 272,112 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Abhd12
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v15130,544,299 - 130,604,728 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Abhd12
606 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:103
Count of miRNA genes:74
Interacting mature miRNAs:90
Transcripts:ENSRNOT00000010641
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12879876Bw182Body weight QTL 1820.003body mass (VT:0001259)body weight (CMO:0000012)3141555229186555229Rat
2301411Bp320Blood pressure QTL 3200.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3141555229186555229Rat
1582233Insul10Insulin level QTL 105.40.0015blood insulin amount (VT:0001560)serum insulin level times blood glucose level (CMO:0002040)3133259579178259579Rat
12879872Cm97Cardiac mass QTL 970.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3141555229186555229Rat
12879873Cm96Cardiac mass QTL 960.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)3141555229186555229Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3151075912189428310Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)3129154923182114333Rat
12879874Cm98Cardiac mass QTL 980.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)3141555229186555229Rat
12879875Kidm64Kidney mass QTL 640.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3141555229186555229Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3133134628178134628Rat
1582213Insul6Insulin level QTL 63.70.0009blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
1300173Rf11Renal function QTL 113.38renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)3141508991166376254Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3152055202189428310Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3142898802187898802Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)3145335553189428310Rat
1354611Despr2Despair related QTL 23.030.0028locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)3117537367162537367Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3125116475170116475Rat
1582256Insul9Insulin level QTL 94.40.0016blood insulin amount (VT:0001560)absolute change in serum insulin level (CMO:0002038)3155759447189428310Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3139299381184299381Rat
5686842Rf59Renal function QTL 59urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)3122395989167395989Rat
1300159Kidm4Kidney mass QTL 43.83kidney mass (VT:0002707)right kidney wet weight to body weight ratio (CMO:0001953)3141508991177728348Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)3131036586176036586Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3137114333182114333Rat
1582248Insul7Insulin level QTL 73.90.0041blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)3131036586176036586Rat
1581546Pur13Proteinuria QTL 132.930.0335urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)398651826167012663Rat
1578666Vnigr1Vascular neointimal growth QTL 14.6artery morphology trait (VT:0002191)artery lumen area (CMO:0001409)3151075912189428310Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3151075912189428310Rat
12879871Am7Aortic mass QTL 70.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)3141555229186555229Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3144575244189428310Rat
724532Cm17Cardiac mass QTL 172heart mass (VT:0007028)calculated heart weight (CMO:0000073)3116188400161188400Rat

Markers in Region
AA924737  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23139,659,352 - 139,659,533 (+)MAPPERmRatBN7.2
Rnor_6.03146,630,336 - 146,630,516NCBIRnor6.0
Rnor_5.03152,989,249 - 152,989,429UniSTSRnor5.0
RGSC_v3.43141,468,926 - 141,469,106UniSTSRGSC3.4
Celera3138,421,098 - 138,421,278UniSTS
RH 3.4 Map31196.12UniSTS
Cytogenetic Map3q41UniSTS
RH140375  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr83160,176,217 - 160,176,359 (+)Marker Load Pipeline
mRatBN7.23139,715,810 - 139,715,952 (+)MAPPERmRatBN7.2
Rnor_6.03146,686,923 - 146,687,064NCBIRnor6.0
Rnor_5.03153,047,781 - 153,047,922UniSTSRnor5.0
RGSC_v3.43141,525,601 - 141,525,742UniSTSRGSC3.4
Celera3138,477,426 - 138,477,567UniSTS
RH 3.4 Map31196.11UniSTS
Cytogenetic Map3q41UniSTS
BF414488  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23139,665,302 - 139,666,791 (+)MAPPERmRatBN7.2
Rnor_6.03146,636,286 - 146,637,774NCBIRnor6.0
Rnor_5.03152,995,199 - 152,996,687UniSTSRnor5.0
RGSC_v3.43141,474,876 - 141,476,364UniSTSRGSC3.4
Celera3138,427,048 - 138,428,536UniSTS
RH 3.4 Map31195.21UniSTS
Cytogenetic Map3q41UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 92 59 6 356 192 11 143 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000010641   ⟹   ENSRNOP00000010640
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3160,119,724 - 160,179,929 (-)Ensembl
mRatBN7.2 Ensembl3139,659,317 - 139,719,564 (-)Ensembl
Rnor_6.0 Ensembl3146,630,299 - 146,690,375 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000098567   ⟹   ENSRNOP00000091747
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3160,148,768 - 160,179,969 (-)Ensembl
mRatBN7.2 Ensembl3139,689,132 - 139,719,488 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000111107   ⟹   ENSRNOP00000097732
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3160,121,501 - 160,179,929 (-)Ensembl
mRatBN7.2 Ensembl3139,661,092 - 139,719,564 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000135971   ⟹   ENSRNOP00000104833
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3160,119,724 - 160,179,929 (-)Ensembl
RefSeq Acc Id: NM_001024314   ⟹   NP_001019485
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83160,119,724 - 160,179,929 (-)NCBI
mRatBN7.23139,659,315 - 139,719,522 (-)NCBI
Rnor_6.03146,630,298 - 146,690,375 (-)NCBI
Rnor_5.03152,989,211 - 153,051,233 (-)NCBI
RGSC_v3.43141,468,888 - 141,530,219 (-)RGD
Celera3138,421,060 - 138,481,137 (-)RGD
Sequence:
RefSeq Acc Id: XM_063284387   ⟹   XP_063140457
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83160,121,505 - 160,179,959 (-)NCBI
RefSeq Acc Id: XR_010064685
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83160,122,500 - 160,179,935 (-)NCBI
RefSeq Acc Id: NP_001019485   ⟸   NM_001024314
- UniProtKB: Q6AYT7 (UniProtKB/Swiss-Prot),   A0A8I6ATI5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000010640   ⟸   ENSRNOT00000010641
Ensembl Acc Id: ENSRNOP00000091747   ⟸   ENSRNOT00000098567
Ensembl Acc Id: ENSRNOP00000097732   ⟸   ENSRNOT00000111107
RefSeq Acc Id: XP_063140457   ⟸   XM_063284387
- Peptide Label: isoform X1
- UniProtKB: A6KHH2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000104833   ⟸   ENSRNOT00000135971
Protein Domains
AB hydrolase-1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6AYT7-F1-model_v2 AlphaFold Q6AYT7 1-398 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692519
Promoter ID:EPDNEW_R3044
Type:initiation region
Name:Abhd12_1
Description:abhydrolase domain containing 12
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.03146,690,324 - 146,690,384EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1562570 AgrOrtholog
BioCyc Gene G2FUF-47336 BioCyc
Ensembl Genes ENSRNOG00000036934 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000010641 ENTREZGENE
  ENSRNOT00000010641.6 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.1820 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7096446 IMAGE-MGC_LOAD
InterPro AB_hydrolase UniProtKB/Swiss-Prot
  AB_hydrolase_1 UniProtKB/Swiss-Prot
KEGG Report rno:499913 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93694 IMAGE-MGC_LOAD
NCBI Gene 499913 ENTREZGENE
PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot
  PTHR12277:SF61 UniProtKB/Swiss-Prot
Pfam Abhydrolase_1 UniProtKB/Swiss-Prot
PhenoGen Abhd12 PhenoGen
RatGTEx ENSRNOG00000036934 RatGTEx
Superfamily-SCOP SSF53474 UniProtKB/Swiss-Prot
UniProt A0A8I6ACA9_RAT UniProtKB/TrEMBL
  A0A8I6ATI5 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LMB1_RAT UniProtKB/TrEMBL
  A6KHH2 ENTREZGENE, UniProtKB/TrEMBL
  ABD12_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-02-13 Abhd12  abhydrolase domain containing 12, lysophospholipase  Abhd12  abhydrolase domain containing 12  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-05 Abhd12  abhydrolase domain containing 12  LOC499913  similar to Protein C20orf22 homolog  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-02-09 LOC499913  similar to Protein C20orf22 homolog      Symbol and Name status set to provisional 70820 PROVISIONAL