Uqcrq (ubiquinol-cytochrome c reductase, complex III subunit VII) - Rat Genome Database

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Gene: Uqcrq (ubiquinol-cytochrome c reductase, complex III subunit VII) Rattus norvegicus
Analyze
Symbol: Uqcrq
Name: ubiquinol-cytochrome c reductase, complex III subunit VII
RGD ID: 1562350
Description: Predicted to be involved in brain development and mitochondrial electron transport, ubiquinol to cytochrome c. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial respiratory chain complex III. Human ortholog(s) of this gene implicated in mitochondrial complex III deficiency nuclear type 4. Orthologous to human UQCRQ (ubiquinol-cytochrome c reductase complex III subunit VII); PARTICIPATES IN Alzheimer's disease pathway; Huntington's disease pathway; oxidative phosphorylation pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: complex III subunit 8; complex III subunit VIII; cytochrome b-c1 complex subunit 8; low molecular mass ubiquinone-binding protein; Qpc; ubiquinol-cytochrome c reductase complex 9.5 kDa protein; ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81038,086,691 - 38,093,871 (-)NCBIGRCr8
mRatBN7.21037,585,864 - 37,589,328 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1037,586,888 - 37,589,169 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1042,278,686 - 42,281,973 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01041,768,739 - 41,772,026 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01037,272,455 - 37,275,742 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01038,779,132 - 38,782,489 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1038,779,132 - 38,782,419 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01038,561,411 - 38,564,771 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41038,889,265 - 38,892,552 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1036,933,353 - 36,936,640 (-)NCBICelera
Cytogenetic Map10q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-dexrazoxane  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2-hydroxypropanoic acid  (ISO)
3-chloropropane-1,2-diol  (EXP,ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
acetamide  (EXP)
apigenin  (EXP)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
benzalkonium chloride  (ISO)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chloropicrin  (ISO)
chlorpyrifos  (ISO)
chrysene  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
dextran sulfate  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
doxorubicin  (ISO)
elemental selenium  (ISO)
fenpyroximate  (ISO)
flutamide  (ISO)
folic acid  (ISO)
furan  (EXP)
hydralazine  (ISO)
indometacin  (ISO)
isotretinoin  (ISO)
ivermectin  (ISO)
lead diacetate  (EXP)
lipopolysaccharide  (ISO)
Mesaconitine  (EXP)
methidathion  (ISO)
ochratoxin A  (ISO)
oxybenzone  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
perfluorooctanoic acid  (ISO)
picoxystrobin  (ISO)
pyrimidifen  (ISO)
rac-lactic acid  (ISO)
rotenone  (EXP,ISO)
selenium atom  (ISO)
silicon dioxide  (EXP)
sodium arsenite  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
tamoxifen  (ISO)
tetrachloroethene  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (EXP)
triphenyl phosphate  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
tungsten  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function
protein binding  (IPI,ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Comprehensive gene review and curation RGD comprehensive gene curation
8. The EARP Complex and Its Interactor EIPR-1 Are Required for Cargo Sorting to Dense-Core Vesicles. Topalidou I, etal., PLoS Genet. 2016 May 18;12(5):e1006074. doi: 10.1371/journal.pgen.1006074. eCollection 2016 May.
Additional References at PubMed
PMID:12865426   PMID:14651853   PMID:16120479   PMID:16901643   PMID:18614015   PMID:28844695   PMID:29476059   PMID:32357304   PMID:35352799  


Genomics

Comparative Map Data
Uqcrq
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81038,086,691 - 38,093,871 (-)NCBIGRCr8
mRatBN7.21037,585,864 - 37,589,328 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1037,586,888 - 37,589,169 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1042,278,686 - 42,281,973 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01041,768,739 - 41,772,026 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01037,272,455 - 37,275,742 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01038,779,132 - 38,782,489 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1038,779,132 - 38,782,419 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01038,561,411 - 38,564,771 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41038,889,265 - 38,892,552 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1036,933,353 - 36,936,640 (-)NCBICelera
Cytogenetic Map10q22NCBI
UQCRQ
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385132,866,642 - 132,868,847 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5132,866,630 - 132,868,847 (+)EnsemblGRCh38hg38GRCh38
GRCh375132,202,334 - 132,204,539 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365132,230,218 - 132,232,435 (+)NCBINCBI36Build 36hg18NCBI36
Celera5128,332,343 - 128,334,559 (+)NCBICelera
Cytogenetic Map5q31.1NCBI
HuRef5127,395,036 - 127,397,252 (+)NCBIHuRef
CHM1_15131,635,604 - 131,637,820 (+)NCBICHM1_1
T2T-CHM13v2.05133,386,396 - 133,388,600 (+)NCBIT2T-CHM13v2.0
Uqcrq
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391153,318,749 - 53,321,658 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1153,318,749 - 53,321,658 (-)EnsemblGRCm39 Ensembl
GRCm381153,427,922 - 53,430,831 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1153,427,922 - 53,430,831 (-)EnsemblGRCm38mm10GRCm38
MGSCv371153,242,450 - 53,244,333 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361153,271,345 - 53,274,237 (-)NCBIMGSCv36mm8
Celera1158,008,668 - 58,010,551 (-)NCBICelera
Cytogenetic Map11B1.3NCBI
cM Map1131.94NCBI
LOC102006544
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554084,240,072 - 4,241,342 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554084,240,072 - 4,241,342 (+)NCBIChiLan1.0ChiLan1.0
LOC100987427
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24128,179,446 - 128,180,251 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15126,318,678 - 126,319,815 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05128,283,869 - 128,285,010 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15134,442,880 - 134,444,006 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5134,442,883 - 134,444,020 (+)Ensemblpanpan1.1panPan2
UQCRQ
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11121,148,964 - 21,150,573 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1121,149,061 - 21,150,572 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1119,951,811 - 19,953,412 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01121,936,243 - 21,937,853 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1121,936,365 - 22,133,742 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11120,654,600 - 20,656,208 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01120,502,312 - 20,503,921 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01121,144,831 - 21,146,441 (+)NCBIUU_Cfam_GSD_1.0
LOC101970096
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213115,346,390 - 115,347,871 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366472,348,835 - 2,381,645 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366472,349,152 - 2,350,570 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UQCRQ
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2135,186,501 - 135,188,293 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12135,186,366 - 135,188,237 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22140,654,907 - 140,656,750 (+)NCBISscrofa10.2Sscrofa10.2susScr3
UQCRQ
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12335,684,395 - 35,685,481 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2335,684,495 - 35,685,670 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603442,256,991 - 42,258,119 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
LOC101712532
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473339,233,359 - 39,234,945 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473339,233,359 - 39,235,008 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Uqcrq
28 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:93
Count of miRNA genes:77
Interacting mature miRNAs:84
Transcripts:ENSRNOT00000073964
Prediction methods:Microtar, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61441Btemp1Thermal response to stress QTL 14body temperature trait (VT:0005535)core body temperature (CMO:0001036)103539245763642539Rat
9589136Insul27Insulin level QTL 2710.460.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)101147401056474010Rat
1578779Tcas10Tongue tumor susceptibility QTL 103.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)103129743976297439Rat
631564Apr3Acute phase response QTL 33.9blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)101527595560275955Rat
1298069Bp168Blood pressure QTL 1685.5blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)102652195798003205Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat
631557Bp136Blood pressure QTL 1360.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)103063205375632053Rat
61325Aia5Adjuvant induced arthritis QTL 50.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
1578761Stresp21Stress response QTL 213.3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)10637574651375746Rat
2298544Neuinf9Neuroinflammation QTL 94.6nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)10580199062146030Rat
61332Eau3Experimental allergic uveoretinitis QTL 30.004uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)103449055945579777Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1041834445418344Rat
1554317Bmd4Bone mineral density QTL 49.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)101981604299406971Rat
1598852Anxrr19Anxiety related response QTL 195.07body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)101816784163167841Rat
1581497Esta1Estrogen-induced thymic atrophy QTL 1thymus mass (VT:0004954)thymus wet weight (CMO:0000855)102132980561345413Rat
2313095Bss62Bone structure and strength QTL 621.50.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)10538701450387014Rat
724527Bp148Blood pressure QTL 1480.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)102845313673453136Rat
1358897Stresp6Stress response QTL 64.170.022blood norepinephrine amount (VT:0005663)plasma norepinephrine level (CMO:0001010)103539226764155584Rat
1331762Rf40Renal function QTL 403.873kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)102929950464155584Rat
2300171Bmd58Bone mineral density QTL 584.90.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)102694462871944628Rat
61354Pia10Pristane induced arthritis QTL 100.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
2301967Cm73Cardiac mass QTL 734.55heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)101448701189062041Rat
2303118Mamtr7Mammary tumor resistance QTL 70.003mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)109658275104670812Rat
2313104Bss61Bone structure and strength QTL 610.90.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)10538701450387014Rat
9590310Scort19Serum corticosterone level QTL 196.30.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)101147401056474010Rat
10402859Bp381Blood pressure QTL 3810.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)102760646872606468Rat
2316949Gluco60Glucose level QTL 603.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1014487011107057807Rat
6893352Bw100Body weight QTL 1000.330.6body mass (VT:0001259)body weight (CMO:0000012)11590666560906665Rat
724556Pur2Proteinuria QTL 25.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)102242750090627625Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10615418273453136Rat
2313066Bss63Bone structure and strength QTL 631.40.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)10538701450387014Rat
2313064Bmd71Bone mineral density QTL 710.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)10538701450387014Rat
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
1354587Kidm21Kidney mass QTL 213.3kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)101502851360430477Rat
6893350Bw99Body weight QTL 990.870.16body mass (VT:0001259)body weight (CMO:0000012)11590666560906665Rat
2317043Aia7Adjuvant induced arthritis QTL 73.82joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)103756507982565079Rat
70224Eae3Experimental allergic encephalomyelitis QTL 34.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)102652195761345413Rat
2317042Aia20Adjuvant induced arthritis QTL 203.38joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)103756507982565079Rat
2313081Bss64Bone structure and strength QTL 641.30.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)10538701450387014Rat
1331791Cm31Cardiac mass QTL 313.84606heart mass (VT:0007028)heart wet weight (CMO:0000069)1029299504107211142Rat
2313087Bmd80Bone mineral density QTL 803.20.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)101960648364606483Rat
634327Hc4Hypercalciuria QTL 42.4urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)10138328221Rat
1354614Hpcl1Hepatic cholesterol level QTL 13.3liver cholesterol amount (VT:0010498)liver cholesterol level (CMO:0001597)103539226751793994Rat
631532Cm50Cardiac mass QTL 506.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)101790711351786432Rat
1576319Cia29Collagen induced arthritis QTL 29joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)103397392178973921Rat
7411611Foco17Food consumption QTL 1718.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)10142315980Rat
631267Cia20Collagen induced arthritis QTL 203.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
1600371Mcs21Mammary carcinoma susceptibility QTL 213mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)102887565052200160Rat
631268Cia21Collagen induced arthritis QTL 213.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1014487011104060283Rat
9590268Scort13Serum corticosterone level QTL 133.260.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)101147401056474010Rat
1576311Pia26Pristane induced arthritis QTL 26joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)103122402675632053Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10635789696121100Rat
2292441Bp308Blood pressure QTL 308arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)102760646872606468Rat
2313055Bw96Body weight QTL 963.60.0001body mass (VT:0001259)body weight (CMO:0000012)101960648364606483Rat
631542Bp82Blood pressure QTL 826.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)102652195798952741Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 21 129 216 146 69 146 36 41 250 115 145 47 24
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001025134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006246316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC114017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY323237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000073964   ⟹   ENSRNOP00000065074
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1038,779,132 - 38,782,419 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000100770   ⟹   ENSRNOP00000089793
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1037,586,888 - 37,589,169 (-)Ensembl
RefSeq Acc Id: NM_001025134   ⟹   NP_001020305
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81038,086,691 - 38,089,978 (-)NCBI
mRatBN7.21037,585,864 - 37,589,151 (-)NCBI
Rnor_6.01038,779,132 - 38,782,419 (-)NCBI
Rnor_5.01038,561,411 - 38,564,771 (-)NCBI
RGSC_v3.41038,889,265 - 38,892,552 (-)RGD
Celera1036,933,353 - 36,936,640 (-)RGD
Sequence:
RefSeq Acc Id: XM_006246316   ⟹   XP_006246378
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81038,087,715 - 38,093,871 (-)NCBI
mRatBN7.21037,586,885 - 37,589,328 (-)NCBI
Rnor_6.01038,780,151 - 38,782,489 (-)NCBI
Rnor_5.01038,561,411 - 38,564,771 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001020305 (Get FASTA)   NCBI Sequence Viewer  
  XP_006246378 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAP84717 (Get FASTA)   NCBI Sequence Viewer  
  EDM04381 (Get FASTA)   NCBI Sequence Viewer  
  EDM04382 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000089793.1
GenBank Protein Q7TQ16 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001020305   ⟸   NM_001025134
- UniProtKB: Q7TQ16 (UniProtKB/Swiss-Prot),   A6HEC7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006246378   ⟸   XM_006246316
- Peptide Label: isoform X1
- UniProtKB: Q7TQ16 (UniProtKB/Swiss-Prot),   A6HEC7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000065074   ⟸   ENSRNOT00000073964
Ensembl Acc Id: ENSRNOP00000089793   ⟸   ENSRNOT00000100770

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7TQ16-F1-model_v2 AlphaFold Q7TQ16 1-82 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13697176
Promoter ID:EPDNEW_R7701
Type:initiation region
Name:Uqcrq_1
Description:ubiquinol-cytochrome c reductase, complex III subunit VII
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01038,782,427 - 38,782,487EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1562350 AgrOrtholog
BioCyc Gene G2FUF-25142 BioCyc
BioCyc Pathway PWY-3781 [aerobic respiration I (cytochrome c)] BioCyc
  PWY-7279 [aerobic respiration II (cytochrome c) (yeast)] BioCyc
BioCyc Pathway Image PWY-3781 BioCyc
  PWY-7279 BioCyc
Ensembl Genes ENSRNOG00000048174 Ensembl
  ENSRNOG00000067979 Ensembl, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000100770.1 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.5.210 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Cyt_bc1_su8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cyt_bc1_su8_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:497902 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 497902 ENTREZGENE
PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT 8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12119 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam UcrQ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Uqcrq PhenoGen
RatGTEx ENSRNOG00000048174 RatGTEx
  ENSRNOG00000067979 RatGTEx
Superfamily-SCOP SSF81508 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A6HEC7 ENTREZGENE, UniProtKB/TrEMBL
  Q7TQ16 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-04 Uqcrq  ubiquinol-cytochrome c reductase, complex III subunit VII  Qpc  low molecular mass ubiquinone-binding protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-02-09 Qpc  low molecular mass ubiquinone-binding protein      Symbol and Name status set to provisional 70820 PROVISIONAL