Gene: Entr1l3 (endosome associated trafficking regulator 1 like 3) Rattus norvegicus
Analyze
Symbol:
Entr1l3 (Ensembl: Entr1)
Name:
endosome associated trafficking regulator 1 like 3 (Ensembl:endosome associated trafficking regulator 1)
RGD ID:
1562289
Description:
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
endosome-associated-trafficking regulator 1-like; LOC501516; RGD1562289; serologically defined colon cancer antigen 3 homolog; similar to RIKEN cDNA C330016H24
RGD Orthologs
Alliance Orthologs
No known orthologs.
More Info
homologs ...
More Info
Latest Assembly:
mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 X 8,964,296 - 8,966,437 (+) NCBI GRCr8 mRatBN7.2 X 6,381,218 - 6,383,349 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 3 9,200,967 - 9,207,688 (-) Ensembl mRatBN7.2 Ensembl mRatBN7.2 Ensembl X 6,381,319 - 6,383,094 (+) Ensembl mRatBN7.2 Ensembl Rnor_6.0 X 7,049,642 - 7,051,625 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_5.0 X 7,844,039 - 7,846,003 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 X 18,019,437 - 18,020,585 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera X 6,871,114 - 6,872,627 (+) NCBI Celera Cytogenetic Map X q11 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
References
Genomics
QTLs in Region (mRatBN7.2)
70165 Bp64 Blood pressure QTL 64 5.2 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) X 1448129 31706553 Rat 1298071 Edpm12 Estrogen-dependent pituitary mass QTL 12 3.2 pituitary gland mass (VT:0010496) pituitary gland wet weight (CMO:0000853) X 2927898 47927898 Rat 731181 Uae27 Urinary albumin excretion QTL 27 2.7 0.0059 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) X 1 43491017 Rat 70166 Bp65 Blood pressure QTL 65 5.8 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) X 1447972 11374346 Rat 10755455 Coatc13 Coat color QTL 13 0 coat/hair pigmentation trait (VT:0010463) pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) 7 4406000 49406000 Rat 631666 Iddm5 Insulin dependent diabetes mellitus QTL 5 blood glucose amount (VT:0000188) plasma glucose level (CMO:0000042) X 4494549 49494549 Rat 634325 Bw13 Body weight QTL 13 0 body mass (VT:0001259) body weight (CMO:0000012) X 1447972 20991088 Rat 631204 Gluco15 Glucose level QTL 15 0.001 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) X 1623715 22646544 Rat
Expression
RNA-SEQ Expression
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Sequence
Ensembl Acc Id:
ENSRNOT00000061669 ⟹ ENSRNOP00000058381
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 9,200,967 - 9,207,688 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000088578 ⟹ ENSRNOP00000097188
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 9,200,972 - 9,207,679 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000089705 ⟹ ENSRNOP00000068774
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 9,200,967 - 9,207,655 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000102669 ⟹ ENSRNOP00000096122
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 9,200,970 - 9,207,664 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000105263 ⟹ ENSRNOP00000084886
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 9,200,967 - 9,207,688 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000106972 ⟹ ENSRNOP00000087265
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl X 6,381,319 - 6,383,094 (+) Ensembl
RefSeq Acc Id:
XM_576917 ⟹ XP_576917
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 X 8,964,296 - 8,966,437 (+) NCBI mRatBN7.2 X 6,381,218 - 6,383,349 (+) NCBI Rnor_6.0 X 7,049,642 - 7,051,625 (+) NCBI Rnor_5.0 X 7,844,039 - 7,846,003 (+) NCBI RGSC_v3.4 X 18,019,437 - 18,020,585 (+) RGD
Sequence:
AATGAGAGAGGCCGGCAGGCTTCCGGCCGGCCGCGCCGGATGAGGCAGGGGCTGGCGACGGCGT
hide sequence
RefSeq Acc Id:
XP_576917 ⟸ XM_576917
- Sequence:
MSGYARRQGAPPLSRTRSLVVPDDFGYGKGKCTKQGPSGAHETRFGGDKLEDLEEANPFSFKEF
hide sequence
Ensembl Acc Id:
ENSRNOP00000087265 ⟸ ENSRNOT00000106972
Ensembl Acc Id:
ENSRNOP00000097188 ⟸ ENSRNOT00000088578
Ensembl Acc Id:
ENSRNOP00000096122 ⟸ ENSRNOT00000102669
Ensembl Acc Id:
ENSRNOP00000058381 ⟸ ENSRNOT00000061669
Ensembl Acc Id:
ENSRNOP00000068774 ⟸ ENSRNOT00000089705
Ensembl Acc Id:
ENSRNOP00000084886 ⟸ ENSRNOT00000105263
Additional Information
Nomenclature History
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2023-09-19
Entr1l3
endosome associated trafficking regulator 1 like 3
RGD1562289
similar to RIKEN cDNA C330016H24
Symbol and Name Changed
1299863 APPROVED
2008-04-30
RGD1562289
similar to RIKEN cDNA C330016H24
RGD1562289_predicted
similar to RIKEN cDNA C330016H24 (predicted)
'predicted' is removed
2292626 APPROVED
2006-03-07
RGD1562289_predicted
similar to RIKEN cDNA C330016H24 (predicted)
LOC501516
similar to RIKEN cDNA C330016H24
Symbol and Name status set to approved
1299863 APPROVED
2006-02-09
LOC501516
similar to RIKEN cDNA C330016H24
Symbol and Name status set to provisional
70820 PROVISIONAL
