Cellular Component Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | nucleoplasm | is_active_in | IBA | FB:FBgn0263396 more ... | 1600115 | GO_REF:0000033 | GO_Central | GO_REF:0000033 | |
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Cellular Component Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | nucleoplasm | is_active_in | IBA | FB:FBgn0263396 more ... | 1600115 | GO_REF:0000033 | GO_Central | GO_REF:0000033 | |
# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | reproductive system | respiratory system | appendage | |
High | ||||||||||
Medium | 7 | |||||||||
Low | ||||||||||
Below cutoff | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 |
RefSeq Acc Id: | ENSRNOT00000004491 ⟹ ENSRNOP00000066307 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001408902 ⟹ NP_001395831 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
Protein RefSeqs | NP_001395831 | (Get FASTA) | NCBI Sequence Viewer |
Ensembl Protein | ENSRNOP00000066307 | ||
ENSRNOP00000066307.1 |
RefSeq Acc Id: | ENSRNOP00000066307 ⟸ ENSRNOT00000004491 |
RefSeq Acc Id: | NP_001395831 ⟸ NM_001408902 |
- UniProtKB: | M0R9X3 (UniProtKB/TrEMBL) |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-M0R9X3-F1-model_v2 | AlphaFold | M0R9X3 | 1-565 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13701928 | ||||||||
Promoter ID: | EPDNEW_R12448 | ||||||||
Type: | single initiation site | ||||||||
Name: | Rbm31y_1 | ||||||||
Description: | RNA binding motif 31, Y-linked | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
Database | Acc Id | Source(s) |
AGR Gene | RGD:1562219 | AgrOrtholog |
BioCyc Gene | G2FUF-1733 | BioCyc |
Ensembl Genes | ENSRNOG00000003377 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000004491 | ENTREZGENE |
ENSRNOT00000004491.6 | UniProtKB/TrEMBL | |
Gene3D-CATH | 3.30.70.330 | UniProtKB/TrEMBL |
InterPro | Nucleotide-bd_a/b_plait_sf | UniProtKB/TrEMBL |
RBD_domain_sf | UniProtKB/TrEMBL | |
RRM_dom | UniProtKB/TrEMBL | |
Serralysin-like_metalloprot_C | UniProtKB/TrEMBL | |
KEGG Report | rno:302780 | UniProtKB/TrEMBL |
NCBI Gene | 302780 | ENTREZGENE |
PANTHER | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN | UniProtKB/TrEMBL |
RNA-BINDING MOTIF 31, Y-LINKED | UniProtKB/TrEMBL | |
Pfam | RRM_1 | UniProtKB/TrEMBL |
PhenoGen | Rbm31y | PhenoGen |
PROSITE | RRM | UniProtKB/TrEMBL |
RatGTEx | ENSRNOG00000003377 | RatGTEx |
SMART | RRM | UniProtKB/TrEMBL |
Superfamily-SCOP | SSF101967 | UniProtKB/TrEMBL |
SSF54928 | UniProtKB/TrEMBL | |
UniProt | M0R9X3 | ENTREZGENE, UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2008-02-29 | Rbm31y | RNA binding motif 31, Y-linked | RGD1562219_predicted | similar to heterogeneous nuclear ribonucleoprotein D-like (predicted) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2006-03-07 | RGD1562219_predicted | similar to heterogeneous nuclear ribonucleoprotein D-like (predicted) | LOC302780 | similar to heterogeneous nuclear ribonucleoprotein D-like | Symbol and Name status set to approved | 1299863 | APPROVED |
2006-02-09 | LOC302780 | similar to heterogeneous nuclear ribonucleoprotein D-like | Symbol and Name status set to provisional | 70820 | PROVISIONAL |