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Gene: Agbl3 (AGBL carboxypeptidase 3) Rattus norvegicus

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Symbol:

Agbl3

Name:

AGBL carboxypeptidase 3

RGD ID:

1561995

Description:

Predicted to enable metallocarboxypeptidase activity and tubulin binding activity. Predicted to be involved in proteolysis. Predicted to be located in cytosol. Predicted to be active in centriole and cytoplasm. Orthologous to human AGBL3 (AGBL carboxypeptidase 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; gentamycin.

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ATP/GTP binding protein-like 3; cytosolic carboxypeptidase 3; LOC500076; RGD1561995; similar to hypothetical protein LOC340351

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	AGBL3 (AGBL carboxypeptidase 3)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Agbl3 (ATP/GTP binding protein-like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Agbl3 (AGBL carboxypeptidase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	AGBL3 (AGBL carboxypeptidase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	AGBL3 (AGBL carboxypeptidase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Agbl3 (AGBL carboxypeptidase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	AGBL3 (AGBL carboxypeptidase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	AGBL3 (AGBL carboxypeptidase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Agbl3 (AGBL carboxypeptidase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Agbl3 (ATP/GTP binding protein-like 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	AGBL3 (AGBL carboxypeptidase 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Nna1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	agbl3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	agbl3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	64,416,139 - 64,498,987 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	64,421,397 - 64,498,985 (+)	Ensembl				GRCr8
mRatBN7.2	4	63,448,789 - 63,535,538 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	63,453,940 - 63,531,188 (+)	Ensembl				mRatBN7.2
Rnor_6.0	4	62,293,158 - 62,377,740 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	62,299,044 - 62,376,533 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	62,030,266 - 62,108,476 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	62,167,594 - 62,256,297 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	58,499,976 - 58,584,581 (+)	NCBI		Celera
Cytogenetic Map	4	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

clothianidin (ISO)

dimethyl sulfoxide (ISO)

dorsomorphin (ISO)

ethanol (ISO)

folic acid (ISO)

formaldehyde (ISO)

gentamycin (EXP)

methylmercury chloride (ISO)

mono(2-ethylhexyl) phthalate (ISO)

nickel atom (ISO)

niclosamide (ISO)

okadaic acid (ISO)

paracetamol (EXP)

phenobarbital (ISO)

S-nitrosoglutathione (ISO)

SB 431542 (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

trovafloxacin (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

protein side chain deglutamylation (ISO)

proteolysis (IEA)

Cellular Component

centriole (IBA)

cytoplasm (IBA)

cytosol (IEA)

microtubule cytoskeleton (IBA)

Molecular Function

carboxypeptidase activity (IEA)

hydrolase activity (IEA)

metal ion binding (IEA)

metallocarboxypeptidase activity (IBA,IEA,ISO)

metallopeptidase activity (IEA)

peptidase activity (IEA)

tubulin binding (IBA)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:17244817	PMID:25103237

Genomics

Comparative Map Data

Agbl3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	64,416,139 - 64,498,987 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	64,421,397 - 64,498,985 (+)	Ensembl				GRCr8
mRatBN7.2	4	63,448,789 - 63,535,538 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	63,453,940 - 63,531,188 (+)	Ensembl				mRatBN7.2
Rnor_6.0	4	62,293,158 - 62,377,740 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	62,299,044 - 62,376,533 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	62,030,266 - 62,108,476 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	62,167,594 - 62,256,297 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	58,499,976 - 58,584,581 (+)	NCBI		Celera
Cytogenetic Map	4	q22	NCBI

AGBL3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	134,986,508 - 135,135,778 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	134,986,508 - 135,147,963 (+)	Ensembl			hg38	GRCh38
GRCh37	7	134,671,259 - 134,820,530 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	134,321,802 - 134,386,337 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	7	129,408,666 - 129,558,005 (+)	NCBI		Celera
Cytogenetic Map	7	q33	NCBI
HuRef	7	128,973,846 - 129,123,181 (+)	NCBI		HuRef
CHM1_1	7	134,605,192 - 134,754,487 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	136,294,285 - 136,443,620 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	134,015,578 - 134,164,887 (+)	NCBI

Agbl3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	34,755,249 - 34,837,874 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	34,757,367 - 34,836,394 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	6	34,780,432 - 34,860,939 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	34,780,432 - 34,859,459 (+)	Ensembl			mm10	GRCm38
MGSCv37	6	34,730,432 - 34,807,932 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	6	34,711,027 - 34,735,783 (+)	NCBI		MGSCv36	mm8
Celera	6	34,780,877 - 34,858,071 (+)	NCBI		Celera
Cytogenetic Map	6	B1	NCBI
cM Map	6	15.13	NCBI

Agbl3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955494	7,498,524 - 7,568,888 (-)	Ensembl
ChiLan1.0	NW_004955494	7,497,964 - 7,570,137 (-)	NCBI	ChiLan1.0	ChiLan1.0

AGBL3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	171,802,305 - 171,958,909 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	23,818,551 - 23,969,164 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	126,951,316 - 127,100,608 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	139,456,539 - 139,604,544 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2

AGBL3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	13,018,349 - 13,076,435 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	13,020,927 - 13,077,434 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	14,031,341 - 14,088,639 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	12,999,817 - 13,057,376 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	13,001,621 - 13,057,396 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	13,441,791 - 13,498,757 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	12,541,078 - 12,598,410 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	12,680,226 - 12,737,405 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Agbl3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	20,656,166 - 20,728,239 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936579	789,888 - 860,201 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AGBL3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	14,164,658 - 14,262,611 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	18	14,163,354 - 14,265,504 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	14,970,743 - 15,071,886 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AGBL3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	103,683,209 - 103,806,270 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	103,684,067 - 103,805,753 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666072	161,053 - 723,426 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Agbl3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	6	104,797,926 - 104,874,448 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Agbl3
612 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	252
Count of miRNA genes:	111
Interacting mature miRNAs:	120
Transcripts:	ENSRNOT00000030090, ENSRNOT00000032077, ENSRNOT00000070879
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
5685012	Bmd87	Bone mineral density QTL 87	5.1		tibia mineral mass (VT:1000283)	bone mineral content (CMO:0001554)	4	35113290	80113290	Rat
1358352	Srcrt3	Stress Responsive Cort QTL 3	2.29		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	39431983	123203361	Rat
1549843	Bw53	Body weight QTL 53		0.0001	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	59753119	104753119	Rat
61445	Strs3	Sensitivity to stroke QTL 3	3		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	4	41400577	86400577	Rat
6893678	Bw108	Body weight QTL 108	2.6	0.006	body mass (VT:0001259)	body weight (CMO:0000012)	4	44425024	89425024	Rat
5685009	Bmd86	Bone mineral density QTL 86	3.7		tibia mineral mass (VT:1000283)	bone mineral density (CMO:0001226)	4	57613242	102613242	Rat
10755501	Bp390	Blood pressure QTL 390	2.5		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	4	27730518	170099664	Rat
1331807	Rf31	Renal function QTL 31	2.988		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	4	40490442	75726188	Rat
634311	Sach7	Saccharin preference QTL 7			taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	58079875	82597589	Rat
1358363	Sradr3	Stress Responsive Adrenal Weight QTL 3	6.19		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	4	58817672	103817672	Rat
61330	Eau1	Experimental allergic uveoretinitis QTL 1		0.0003	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	4	26234499	134199155	Rat
738009	Sach4	Saccharine consumption QTL 4	4.9	0.000016	consumption behavior trait (VT:0002069)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	60916264	184426481	Rat
631261	Tcas3	Tongue tumor susceptibility QTL 3	6.88		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	4	11706604	92690519	Rat
6478772	Anxrr49	Anxiety related response QTL 49		0.15488	defecation behavior trait (VT:0010462)	defecation rate (CMO:0000998)	4	64084079	109084079	Rat
61336	Bp21	Blood pressure QTL 21	4.6		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	58080146	80212111	Rat
2312569	Pur19	Proteinuria QTL 19	3.4	0.001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	4	59836842	104836842	Rat
8655961	Kidm43	Kidney mass QTL 43	18		kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	4	37269577	82269577	Rat
1354612	Foco1	Food consumption QTL 1	8.87		eating behavior trait (VT:0001431)	food intake rate (CMO:0000427)	4	45429897	149763204	Rat
6909128	Pancm4	Pancreatic morphology QTL 4	11.35		pancreas mass (VT:0010144)	pancreas wet weight (CMO:0000626)	4	27862204	126119996	Rat
634344	Hcar7	Hepatocarcinoma resistance QTL 7	7.8		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	4	61041057	94638356	Rat
2303168	Bp330	Blood pressure QTL 330	4.25	0.017	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	5889999	148002343	Rat
61475	Aia2	Adjuvant induced arthritis QTL 2	5.8		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	40471453	75939996	Rat
8694439	Bw168	Body weight QTL 168	9.57	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	4	41400603	86400603	Rat
738031	Alc14	Alcohol consumption QTL 14	7.6	0.00003	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	174095838	Rat
8655906	Rf60	Renal function QTL 60	3.8		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	4	30448961	82336920	Rat
1576305	Emca6	Estrogen-induced mammary cancer QTL 6	5.8		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	4	45429709	157555683	Rat
61418	Pia5	Pristane induced arthritis QTL 5	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	63245026	129846354	Rat
631651	Bp124	Blood pressure QTL 124	3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	64209744	109209744	Rat
738016	Alc16	Alcohol consumption QTL 16	3.6	0.00015	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	184426481	Rat
1558651	Swd3	Spike wave discharge measurement QTL 3	4.62	0.000024	brain electrophysiology trait (VT:0010557)	brain spike-and-wave discharge frequency (CMO:0001742)	4	41400577	86400577	Rat
1358203	Stl19	Serum triglyceride level QTL 19	2.8	0.002	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	4	21925151	66925151	Rat
1354660	Salc1	Saline consumption QTL 1	11.26		drinking behavior trait (VT:0001422)	saline drink intake rate (CMO:0001627)	4	45429897	149763204	Rat
1641833	Alc21	Alcohol consumption QTL 21	8.6	0.0001	drinking behavior trait (VT:0001422)	ethanol drink intake rate (CMO:0001407)	4	57664252	127749483	Rat
1298082	Stresp4	Stress response QTL 4			blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	51085655	113588029	Rat
631546	Bp86	Blood pressure QTL 86	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	58079875	92690793	Rat
6478743	Anxrr40	Anxiety related response QTL 40		0.83076	defecation behavior trait (VT:0010462)	defecation rate (CMO:0000998)	4	64084079	109084079	Rat
1300139	Hrtrt6	Heart rate QTL 6	2.85		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	4	40490442	117737312	Rat
70200	Alc18	Alcohol consumption QTL 18	9.2		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	4	57613339	151163960	Rat
61434	Cia3	Collagen induced arthritis QTL 3	4.8		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	63224393	108224393	Rat
7394826	Bw126	Body weight QTL 126		0.002	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	63900458	88813920	Rat
12798520	Anxrr55	Anxiety related response QTL 55	4.45	0.01	locomotor behavior trait (VT:0001392)	number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)	4	33538597	116185060	Rat
4889969	Bss96	Bone structure and strength QTL 96	4.9		tibia size trait (VT:0100001)	tibia cortical bone volume (CMO:0001725)	4	57613242	102613242	Rat
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	12212457	182430611	Rat
4889972	Bss97	Bone structure and strength QTL 97	5.6		tibia size trait (VT:0100001)	tibia total bone volume (CMO:0001724)	4	57613242	102613242	Rat
631671	Iddm11	Insulin dependent diabetes mellitus QTL 11	3.6	0.0012	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	4	59603319	80216952	Rat
6478684	Anxrr30	Anxiety related response QTL 30		0.00087	defecation behavior trait (VT:0010462)	defecation rate (CMO:0000998)	4	64084079	109084079	Rat

Markers in Region

RH129130

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	63,458,376 - 63,458,558 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	62,302,818 - 62,302,999	NCBI	Rnor6.0
Rnor_5.0	4	62,034,749 - 62,034,930	UniSTS	Rnor5.0
RGSC_v3.4	4	62,169,966 - 62,170,147	UniSTS	RGSC3.4
Celera	4	58,509,636 - 58,509,817	UniSTS
RH 3.4 Map	4	375.2	UniSTS
Cytogenetic Map	4	q22	UniSTS

RH143597

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	63,454,045 - 63,454,206 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	62,298,487 - 62,298,647	NCBI	Rnor6.0
Rnor_5.0	4	62,030,418 - 62,030,578	UniSTS	Rnor5.0
RGSC_v3.4	4	62,165,635 - 62,165,795	UniSTS	RGSC3.4
Celera	4	58,505,305 - 58,505,465	UniSTS
Cytogenetic Map	4	q22	UniSTS

BE106741

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	63,520,134 - 63,520,307 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	62,364,576 - 62,364,748	NCBI	Rnor6.0
Rnor_5.0	4	62,096,548 - 62,096,720	UniSTS	Rnor5.0
RGSC_v3.4	4	62,232,464 - 62,232,636	UniSTS	RGSC3.4
Celera	4	58,571,394 - 58,571,566	UniSTS
RH 3.4 Map	4	400.21	UniSTS
Cytogenetic Map	4	q22	UniSTS

RH140956

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	63,531,672 - 63,531,852 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	62,376,112 - 62,376,291	NCBI	Rnor6.0
Rnor_5.0	4	62,108,084 - 62,108,263	UniSTS	Rnor5.0
RGSC_v3.4	4	62,244,000 - 62,244,179	UniSTS	RGSC3.4
Celera	4	58,582,953 - 58,583,132	UniSTS
RH 3.4 Map	4	393.9	UniSTS
Cytogenetic Map	4	q22	UniSTS

Agbl3

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	63,471,788 - 63,472,229 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	62,316,230 - 62,316,670	NCBI	Rnor6.0
Rnor_5.0	4	62,048,202 - 62,048,642	UniSTS	Rnor5.0
RGSC_v3.4	4	62,183,379 - 62,183,819	UniSTS	RGSC3.4
Celera	4	58,523,050 - 58,523,490	UniSTS
Cytogenetic Map	4	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	11	67	164	91	90	59	85	59	6	348	184	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_006224859	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006224860	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006236277	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008775692	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008775693	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108622	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108623	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108624	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286921	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286922	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286925	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286927	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286928	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005503510	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005503511	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010066130	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010066131	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010066132	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC103335	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000032077 ⟹ ENSRNOP00000034021

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	64,421,397 - 64,498,985 (+)	Ensembl
mRatBN7.2 Ensembl	4	63,454,261 - 63,531,188 (+)	Ensembl
Rnor_6.0 Ensembl	4	62,299,044 - 62,376,533 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113430 ⟹ ENSRNOP00000089011

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	64,421,397 - 64,425,699 (+)	Ensembl
mRatBN7.2 Ensembl	4	63,453,940 - 63,458,552 (+)	Ensembl

RefSeq Acc Id:

XM_006236277 ⟹ XP_006236339

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,411 - 64,498,987 (+)	NCBI
mRatBN7.2	4	63,452,278 - 63,535,538 (+)	NCBI
Rnor_6.0	4	62,297,219 - 62,377,740 (+)	NCBI
Rnor_5.0	4	62,030,266 - 62,108,476 (+)	NCBI

Sequence:

show sequence

ACACACACACACGATTTAAGTCCTATCTTTGCCTCTTCCAATGACTGGCTGAGCTGTTTCTCAG
AGCTTCATCTTGTGTACCTGATACTCTATCGCCTTTATCTATGAGTAAAGTCCAACAGATAGAT
TCCATATATAAAGAGTGGCTTAGCCTAGTTACTGTTTCCAATAACACAATACCACCAGCTGGGT
AAGTGTTAAGAAGTCTAGTTTAGCTTTGATTCTAGTGATGCAAGTCAAGGGAACACATTTGGTG
ATCGACTTGCTGAGGGAACAAATGGTACCCTCTAGTAGAAACCAGGAGTGGGTGTCCTCTGCTC
TGTCCTACAGAGTCACTAAGCTTCAACCATGAGAACCCCACATCAATGGTGTCCTTTCATCTTA
TCTCTGAATGCCCCCCCCCATATATTAATACAAGTAGGGGTATGTTTCTATTCTTACAATTCCA
CAGGAGCAATTAAATTTCAGTACTGGAGCTCTGAGGATGCCCTCAAACCAAAGATTCTCTGGGC
ATTGCCACCTTTAGTGATATGCAGGTGGCATAAAACCAAGCAAACTAATATGGAGACTAATTTT
CAAACGACTGTGATCAAAGGTGCACTTAATCTCCTCAGGCTAACGTCCAAAGAAAGAGGAAGTC
TCGAAGTTTTTGAATTGCTGACACAAACACATTTCCAGAAAGTTACCAAATCTAGAGATGCTAA
GTCCTTGCCATGCATGAATTCAAGTGCTTAATGTGAACCAAGAGAACACCTAATAATGGATTTT
TTTTAAAAAAAAGCCTTTGCTTGAAAAAACTGTTCCAACTGTATTATCCACCAAAGTTAAAAAT
GACCAACAAATCAGGGTTAGATGTATACACGTGTACACACACACACACACACACACACACACAC
ACACACACACATCCTAAGTCTGCTGTGGGGGTATCTTATTGACTTAAATAAGGCAAAGTGGGGA
TTAAAAGTGTTGGCTAACAAAGAATTTCTTAACCGATACTTTGAGAATTCACTCTCATATAGCC
AAGACTGCTCCAGATCAAGTATTTGAGTTTCATTTCCAGAATAAAGATGGATTTCAATTGTGCA
GAATGGAACTCAACCGTTTAACTCCAAGTACAATTACTTCATTTTTATTAATGAGGTTTAGTCC
AGAAAATTAACTTGCCTGTGGTCATCAGGTTGTTAAAAGTCAAGTGAGCATCCAGACACAAGCC
TTAAACCGTATGTTCTAATGCCTTCTCTGCGCAGGCACCCAGCAAATTGCTGTCACTCCGAACA
AACTGCTGCCACGCCTTTCTCCAGTGCTCAATCCTCCCTCCAGCCTCCAACACTCAAACCTCTT
CAAACCCTAAGCCTAGCCGGGAGTTCCCATCATCCCCCGGCATCACTTTCTCCAGCCAAAGTCT
CACCACCTTCATAGCTGTCGCTAGGGGGAGAAAGCGCCAAACCTTCCCGAACTCTCGCGAGACT
ACAGCCGTTGCCACGGCAACAAGTGGCCTCCTCTCCCTGGAGAGCGTAGCCCCGGCCGCTGAAT
TACGATGGTGTTTCCTCTGGCCCTGTGGTCGCCCGATGCCTGGGACATTTTATAGCCTACCCAC
ATAATAAAAGAAATCTCAAGAAAGACACTAGAAGAGATGTCAGAAGATTCAGAAGAGGAAGACT
ATTCAGATAGAAGTATCAGTGATGACGATGAGTTGGATGAGGATTCATTCATGAAATTTGTAAG
TGATGATATTCATCAGTGTACACTACTAACAGCTGATTCTATTGGTGACCCATTCTTTCCTCGG
ACTACACAGATTTTATTGGAGTATCAGCTAGGAAGATGGGTACCACGCCTTCGAGAACCACGAG
ATTTATATGGCGTCTCTTCTTCTGGTCCGCTGAGCCCAACACGGTGGCCATACCACTGTGAGGT
CATTGATGAAAAAGTCCAGCATATTGAGTGGACTCCTTTTGTTCCTGAGCCGGTCTATGTCCCA
ACAGGCCTGGAAATAGAACCTGTTTACCCAAACTCCAAGGAAGACACCGTGGTTTACCTAGCTG
AAGATGCTTACAAAGAGCCCTGTTTTGTGTATTCCCGAGTTGGGGGTAACCGAACACCCTTGAA
ACAACCTGTGAATAGCTGTGACAACACGTTGGTGTTTGAAGCAAGGTTTGAGAGTGGTAATCTA
CAGAAGGTAGTCAAAGTTGCAGATTATGAATACGAGTTGACTGTGCGCCCAGACCTCTTCACAA
ATAAGCACACTCAGTGGTACTATTTCCAAGTCACTAATACCCGAGCAGAAATAGTCTACAGATT
CACTATTGTCAACTTTACCAAGCCTGCTAGTCTTTACAATCGGGGTATGAGGCCACTGTTCTAT
TCTGAAAAAGAAGCCAAAACCCATAAAATTGGCTGGCAGAGAATAGGAGACCAGATCAAGTATT
ATAAAAATAACCTTGGGCAAGATGGGCGTCATTTTTTTTCCCTTACATGGACATTTCAGTTTCC
ACACAGCAAGGACACTTGCTACTTTGCTCACTGCTATCCATACACTTACTCCAACCTTCAAGAA
TACCTTTCTGGCATCAACAGTGACCCAGTAAGATCAAAGTTTTGTAAAATACGTGTCTTGTGTC
ACACACTTGCTAGGAATATGGTGTATGTTTTGACAATAACTACTCCCTTGAAGACTAGTGACGC
AAAGCGCAAGGCTGTGATTTTGACTGCAAGGGTCCATCCAGGGGAGACCAACAGCTCTTGGATC
ATGAAAGGCTTCCTAGATTATATTTTAGGAGACTCAAGTGATGCACGCCTGCTTCGGGACACTT
TCATCTTCAAGGTGGTACCCATGCTGAATCCAGATGGTGTGATTGTGGGAAACTATCGATGTTC
CTTAGCTGGACGGGATTTAAACCGTAATTACACATCTCTCCTGAAGGAGTCTTACCCTTCTGTC
TGGTATACGAGGAACATGATCAATAGGTTAATGGAAAAACGAGAGGTTATTTTATATTGTGATC
TTCATGGCCATAGTAGGAAACAGAACATCTTCATGTATGGTTGTGATGGTAGCAGCAGATCTAA
AACGAAAGGATTGTACTTACAGCAACGAATCTTTCCACTCATGCTGAGCAAAAATTGCCCGAAT
ATATTTTCCTTCTCAGCTTGCAAGTTTAACGTTCAGAAGAGCAAAGAGGGGACAGGAAGGGTTG
TGATGTGGAAGATGGGCATCAGGAACAGCTTCACGCTGGAGGCCACCTTCTGCGGATCTACTCT
GGGCAATAAGCGAGGCACACATTTCAGCACGAAAGACTTAGAGTTGATGGGATATCATTTTTGT
GATTCTCTATTGGACTACTGTGATCCTGACCGGAGCAAATATTATCAGTGCCTAAAGGAATTAG
AAGAAATGGAAAAACATATGAACTTCGAAAGAGTCTTTGATGATTCAGACACTTCTCTAGTAGA
AATTTCTTTGGATGTAGAGTCTAGTAGTCGAGGCTCTGACAGCTCAGAGTCCAATGACACTCAG
ACTTATCTTCTCAAGGTGACCTCTCAGGCAAAAAACAAGAAAAAGTACCTGAAAACAAAGAGGG
AAAGAAATGCCATCCTAGCAAACCGCCAGAATGACATGGGAGAGGTTTATGGTAAAGAACATTT
ACTCCAAAGACACGAAGAATCAAATTCTGATGGGAAAGACCCCAGTGTGATTGCACCAGATGTT
TACATGGCTCACTGCTTCAGAAGATCATCGCCCAGCCGAAGCTTGGTGAAAATTCCTGGACAAA
GGTTTCATCCCCGAAAATCACGGTCCAGCTCCCGACGTATGATTAAAAGTCTTAACAAAGACCA
TCGGACATATATTTTAGAAACGTGTAAGACTCCAATCCAGGAAGTTCAGTCCAGAGCAATGGAT
ATATGTGAAAGTTGTTTCAGAGTGGCATCCTTGAAATGTCCTGTGAACAAAAGACCTTCAAATT
GGATTGAGAAGACAAGGACACCAACAGAGTCAAATCACCAATTGAAAAGCAAAGCAAAAAGATG
TACATCTTTCCAAAGCAAGAGGACTGGTACAAATTGGACAGATGATGAAAAACGAATTTACAGG
GATAAAAGAATAGCTCGAACTCAGGAAATACTACAGTACTTACTCCCTATCGTGGAATCCTCTA
AAAGCATGAAATCTACTCAAATGAACAATCTAGTCAATCCAAGAGCAAACTTCCAACAGCATGA
ACTTATTCCAACTGCTTGCATAAATAAAAGAAGATACAGCACACCTTGGGCACCAACCAGGAAT
CTCCCTTTTAAAGCCCAAACGAATCTTATGACAGATAACTCTGAATGGCTCCAGTCTGTGACCC
AGGGGTCATTTGAAAGTCTATCACCTCTCTGCAATCTTCAGAAGAAGACAAAGCATTTTGAACT
CTGGGTCAACAAGGCTAAGGAAGGGCAGCTTGCCACCAGCAAATGGGAGACTGTTCCCTCAAGT
TCTAAAGTGGATACAAATGTCATCAGAGGTAGCAGTCTTCTTCCGCCTAAAGAATCCACCGTGA
GGAGCTCTGAGCAGAGAATTCCTTATCTAAGCAGAGGCATCAAGAAACCCAGTGAGAGGAATGG
CCCGCTCAGCTTTCCACCTGAAGTCCCAGAGGAACAGTTAGCTGAGCTGAAAGTTCCTCCAAGA
ACTCTGGCTGAGCAAGATGTGTTGACAGCAAAAGTACAGCAGCCCCTCCCAGCCCTCCCCCCTT
CACATGCACATGTGGCTACTAAACTACAGAGTTTTACAAATCCCAACTTCCTGAGAGGAAACAT
CTTTCAGAGATCTTAAAAATCCAGAGAAAATATAAAGTTTAAAACACATATTTGTATCAACATG
GGAAAGAGCTCAAAACTTTTGATTTCTACCAAAATTATGTATGCATATAACACCAAAAAACTAA
GACTTCAAGAAAGGGAGAGACGTGCACTATTAATGATTTTAGTCTATTAGTCACTTTGATGAAC
CAGCAGCCAACATTCCCCGTGTTTCTTTGATATAGTTGGTGCACTAGAAAGCACAGGAGAAATA
AAAAGATTTCTCCCCCTAAAAGATCACATATTCTAGCAATCCCAGAACTTGGGAGGTGGAGGCA
GAAGGATCAGGGACTCAAGGCTAGCTTGGGCAATATTTAAAAACAGCAGGATAATAAATCCTAA
TAGTACCTGACTAGGAATGCATAGTACACTAATGTGTGTACCTCCGGGTGATAAAATAGGACAT
ATTAAAAACACTGCTTGCACAGACCACAAAAGGTGGAACCAAACGGCATGAAAATACATTATGG
TTCCAAAGTCATTTTACCGCTCATGATTAAGCAATGTTGTAAATGATTAGAAGTCCCCATTCTT
CCAGAATCAGCAAAGCCACGCCTCCAGCCAGTTCTTCAAGAAGATACTTCAGAAACAAGTCCTG
CATCTCACATTTGTCATAAGGTGGTGAGCACTCAGGTCCAGGGGTGCAAGGTACAATCCCATCT
GCATAGAAGCCTGACTCAGGAAGATCACAAGTTCAGCGCTTGCCTGGGCTACAATGGGAGTTCA
AGAGCAGTCTCAGCCACCTAATGAAACTTTGTCTCTAAACAAAAGGCTCAGGCAAAGGGGAAGG
AAACTGCGTGTGTAGCTAGGTGACAGAGAACTACCTGCCTGTGTGGGGAAGCCCTAGTTCACAC
CTCGGGTATCATGCAAAAATAAAAACACAAGGAGCTCAAGGAGGGTCTCCTGGAGTGAGTGTGG
CGCCTAGGTTCACAGAGAGCTCCCTAGGTTTTTCAGGAGGAATTCTCACCTTGCTAACTGACAT
CATGGTAAAATGCAAGCTTCAAAAGCCACTTGCCCTATTTGTCATAAATTGAGGAGAGCCTAAA
CTTTGTGGAACTCTACATTGTTGCCACTCATTATACAAAACTTCAATTGTATAAAAGTTTGAGA
CTATAAACTCTAGAGTTGAATATGTTTGTGAGTATAACCAAAGTAACAAAACTGGTTTCTCAGA
AGACTGAGGAGTGCAGAGATATTCTCTTTATTACTTCCTTTTTCCTTGCCCTCACAGTAACTCC
CCCTGTATCAATTTTTTTCATAATATCTGTATTAATTATTTGGGAATTTTACATCATGAACCCT
GAGCACACACTCCTCCCATTACTCCCAGGTTTCCCCAGGCACCCTTGTGGCCTCTCCCACCACC
ACCACCCCCCCCAAAAGAAGAAAAAGAACTAAAACAAAAATACCTAACAAGTCCAATTTTTGTT
GCCCATGTACTCAATGGAGTATAAAGGCCTGGTGGCCAGCCCCTTAAAGAAAATTGAGTCCGTT
TCCACCCTCGCCCCTGCCAGAGGCCATCAACTGTGGAGAGCTACACTCCAGTATCCATCCACAT
CACGGTTTTTAATAGTTCTCTTCAGTGCCTCTCTGTCTAGGCTGTTCCTTGTGGCGGTGGGGGT
TAGCTGTTGTCACAGAAGCCTCCCATACCCCTCTCTCCTAACTGTGAGTCTGCAGTCGTCAACA
CCGTGGCAAAAGTCGCTTCCTTGCCCTTCACAGTCAGCAGGCGCACAGATCACAAACATCCGCG
TACTCTCTGGTGCCGGTCAGCCTGAGCCATGGGCCTCAGCATGGTCTCCAGTAGCAGAACAGAC
CACGGACGTCAGCACAGACCTCTGCTGCAGTAGGAACACGGACCCAGACATAGCCCTCAGCAGC
AGCGCAGACGCAGACATCATCATGGCCTCAGACGGCTACACAGAGCATTCTGATCCATATGGCC
CCTGGCAGCAGCACAGCCCACGGACATCCCACAGCTATGGATATCATTTGCTAAAATGTCTTAC
TACACCATTCCTTTTCGTGGGTGGGAATGTAGTATGTCCGTGCACTGTTGGGTCACATATGCCA
GCAGACAAGTGAAGAACAGAGAACAGTTTGCTGGGGTCGGTTGTCCCTCTACCATGCAGGTACA
GGGAGGGAACTCACATGGTCAGGCTTTGCAGCAAGTGCTGATGCCCACTGAGCCATCTAACAAC
CCCTCCCCTTGTGTCTTATTTGCTATGAATACCTGACATACAGATTTCGAAAAATATTCGTAGG
CTGTTTTCACACTCCGCTCTTCAGGTTATAATGTTTAACTTAAATTTTTCAAGTATGCAGCTCC
TCCATAAAGGCCATTCATCCTGTCTGA

hide sequence

RefSeq Acc Id:

XM_017592971 ⟹ XP_017448460

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,416,139 - 64,498,987 (+)	NCBI
mRatBN7.2	4	63,448,789 - 63,535,538 (+)	NCBI
Rnor_6.0	4	62,293,158 - 62,377,740 (+)	NCBI

Sequence:

show sequence

GAAGGTGAGGTGGGGGGCTGAGTCTTAGCTGCTGAGTGGAACAGATCTTAAGACATGACCTTGG
AGACACTTTGAGAGGTTTGGCACTTAGTGCAAGGAAGGTACAGACAAGTACTTGTCTAGCCTCT
GCCGTCCCGTTCCTATAATGGCTTCATCAGTTAAATTGTGTGAAAAGACCTCAAAGTCCCTATG
ATAATTAACTTCTATGATGTCATAAAGAATAAATGCTATGGTCACCTTGTTTCCTTATCTAGAT
ATCTGCTTAATAAATTCCAAGTGGGAAATAATTCAAATAAGTTATATTCCTAACATAACTGACA
CTTTTGCCATTTTACCAAGAAGACATTTTGCTCCTGATTGTCCACACCAAGGACTGTGCCTTTG
GGGATAATACAGACATTTTATAGCCTACCCACATAATAAAAGAAATCTCAAGAAAGACACTAGA
AGAGATGTCAGAAGATTCAGAAGAGGAAGACTATTCAGATAGAAGTATCAGTGATGACGATGAG
TTGGATGAGGATTCATTCATGAAATTTGTAAGTGATGATATTCATCAGTGTACACTACTAACAG
CTGATTCTATTGGTGACCCATTCTTTCCTCGGACTACACAGATTTTATTGGAGTATCAGCTAGG
AAGATGGGTACCACGCCTTCGAGAACCACGAGATTTATATGGCGTCTCTTCTTCTGGTCCGCTG
AGCCCAACACGGTGGCCATACCACTGTGAGGTCATTGATGAAAAAGTCCAGCATATTGAGTGGA
CTCCTTTTGTTCCTGAGCCGGTCTATGTCCCAACAGGCCTGGAAATAGAACCTGTTTACCCAAA
CTCCAAGGAAGACACCGTGGTTTACCTAGCTGAAGATGCTTACAAAGAGCCCTGTTTTGTGTAT
TCCCGAGTTGGGGGTAACCGAACACCCTTGAAACAACCTGTGAATAGCTGTGACAACACGTTGG
TGTTTGAAGCAAGGTTTGAGAGTGGTAATCTACAGAAGGTAGTCAAAGTTGCAGATTATGAATA
CGAGTTGACTGTGCGCCCAGACCTCTTCACAAATAAGCACACTCAGTGGTACTATTTCCAAGTC
ACTAATACCCGAGCAGAAATAGTCTACAGATTCACTATTGTCAACTTTACCAAGCCTGCTAGTC
TTTACAATCGGGGTATGAGGCCACTGTTCTATTCTGAAAAAGAAGCCAAAACCCATAAAATTGG
CTGGCAGAGAATAGGAGACCAGATCAAGTATTATAAAAATAACCTTGGGCAAGATGGGCGTCAT
TTTTTTTCCCTTACATGGACATTTCAGTTTCCACACAGCAAGGACACTTGCTACTTTGCTCACT
GCTATCCATACACTTACTCCAACCTTCAAGAATACCTTTCTGGCATCAACAGTGACCCAGTAAG
ATCAAAGTTTTGTAAAATACGTGTCTTGTGTCACACACTTGCTAGGAATATGGTGTATGTTTTG
ACAATAACTACTCCCTTGAAGACTAGTGACGCAAAGCGCAAGGCTGTGATTTTGACTGCAAGGG
TCCATCCAGGGGAGACCAACAGCTCTTGGATCATGAAAGGCTTCCTAGATTATATTTTAGGAGA
CTCAAGTGATGCACGCCTGCTTCGGGACACTTTCATCTTCAAGGTGGTACCCATGCTGAATCCA
GATGGTGTGATTGTGGGAAACTATCGATGTTCCTTAGCTGGACGGGATTTAAACCGTAATTACA
CATCTCTCCTGAAGGAGTCTTACCCTTCTGTCTGGTATACGAGGAACATGATCAATAGGTTAAT
GGAAAAACGAGAGGTTATTTTATATTGTGATCTTCATGGCCATAGTAGGAAACAGAACATCTTC
ATGTATGGTTGTGATGGTAGCAGCAGATCTAAAACGAAAGGATTGTACTTACAGCAACGAATCT
TTCCACTCATGCTGAGCAAAAATTGCCCGAATATATTTTCCTTCTCAGCTTGCAAGTTTAACGT
TCAGAAGAGCAAAGAGGGGACAGGAAGGGTTGTGATGTGGAAGATGGGCATCAGGAACAGCTTC
ACGCTGGAGGCCACCTTCTGCGGATCTACTCTGGGCAATAAGCGAGGCACACATTTCAGCACGA
AAGACTTAGAGTTGATGGGATATCATTTTTGTGATTCTCTATTGGACTACTGTGATCCTGACCG
GAGCAAATATTATCAGTGCCTAAAGGAATTAGAAGAAATGGAAAAACATATGAACTTCGAAAGA
GTCTTTGATGATTCAGACACTTCTCTAGTAGAAATTTCTTTGGATGTAGAGTCTAGTAGTCGAG
GCTCTGACAGCTCAGAGTCCAATGACACTCAGACTTATCTTCTCAAGGTGACCTCTCAGGCAAA
AAACAAGAAAAAGTACCTGAAAACAAAGAGGGAAAGAAATGCCATCCTAGCAAACCGCCAGAAT
GACATGGGAGAGGTTTATGGTAAAGAACATTTACTCCAAAGACACGAAGAATCAAATTCTGATG
GGAAAGACCCCAGTGTGATTGCACCAGATGTTTACATGGCTCACTGCTTCAGAAGATCATCGCC
CAGCCGAAGCTTGGTGAAAATTCCTGGACAAAGGTTTCATCCCCGAAAATCACGGTCCAGCTCC
CGACGTATGATTAAAAGTCTTAACAAAGACCATCGGACATATATTTTAGAAACGTGTAAGACTC
CAATCCAGGAAGTTCAGTCCAGAGCAATGGATATATGTGAAAGTTGTTTCAGAGTGGCATCCTT
GAAATGTCCTGTGAACAAAAGACCTTCAAATTGGATTGAGAAGACAAGGACACCAACAGAGTCA
AATCACCAATTGAAAAGCAAAGCAAAAAGATGTACATCTTTCCAAAGCAAGAGGACTGGTACAA
ATTGGACAGATGATGAAAAACGAATTTACAGGGATAAAAGAATAGCTCGAACTCAGGAAATACT
ACAGTACTTACTCCCTATCGTGGAATCCTCTAAAAGCATGAAATCTACTCAAATGAACAATCTA
GTCAATCCAAGAGCAAACTTCCAACAGCATGAACTTATTCCAACTGCTTGCATAAATAAAAGAA
GATACAGCACACCTTGGGCACCAACCAGGAATCTCCCTTTTAAAGCCCAAACGAATCTTATGAC
AGATAACTCTGAATGGCTCCAGTCTGTGACCCAGGGGTCATTTGAAAGTCTATCACCTCTCTGC
AATCTTCAGAAGAAGACAAAGCATTTTGAACTCTGGGTCAACAAGGCTAAGGAAGGGCAGCTTG
CCACCAGCAAATGGGAGACTGTTCCCTCAAGTTCTAAAGTGGATACAAATGTCATCAGAGGTAG
CAGTCTTCTTCCGCCTAAAGAATCCACCGTGAGGAGCTCTGAGCAGAGAATTCCTTATCTAAGC
AGAGGCATCAAGAAACCCAGTGAGAGGAATGGCCCGCTCAGCTTTCCACCTGAAGTCCCAGAGG
AACAGTTAGCTGAGCTGAAAGTTCCTCCAAGAACTCTGGCTGAGCAAGATGTGTTGACAGCAAA
AGTACAGCAGCCCCTCCCAGCCCTCCCCCCTTCACATGCACATGTGGCTACTAAACTACAGAGT
TTTACAAATCCCAACTTCCTGAGAGGAAACATCTTTCAGAGATCTTAAAAATCCAGAGAAAATA
TAAAGTTTAAAACACATATTTGTATCAACATGGGAAAGAGCTCAAAACTTTTGATTTCTACCAA
AATTATGTATGCATATAACACCAAAAAACTAAGACTTCAAGAAAGGGAGAGACGTGCACTATTA
ATGATTTTAGTCTATTAGTCACTTTGATGAACCAGCAGCCAACATTCCCCGTGTTTCTTTGATA
TAGTTGGTGCACTAGAAAGCACAGGAGAAATAAAAAGATTTCTCCCCCTAAAAGATCACATATT
CTAGCAATCCCAGAACTTGGGAGGTGGAGGCAGAAGGATCAGGGACTCAAGGCTAGCTTGGGCA
ATATTTAAAAACAGCAGGATAATAAATCCTAATAGTACCTGACTAGGAATGCATAGTACACTAA
TGTGTGTACCTCCGGGTGATAAAATAGGACATATTAAAAACACTGCTTGCACAGACCACAAAAG
GTGGAACCAAACGGCATGAAAATACATTATGGTTCCAAAGTCATTTTACCGCTCATGATTAAGC
AATGTTGTAAATGATTAGAAGTCCCCATTCTTCCAGAATCAGCAAAGCCACGCCTCCAGCCAGT
TCTTCAAGAAGATACTTCAGAAACAAGTCCTGCATCTCACATTTGTCATAAGGTGGTGAGCACT
CAGGTCCAGGGGTGCAAGGTACAATCCCATCTGCATAGAAGCCTGACTCAGGAAGATCACAAGT
TCAGCGCTTGCCTGGGCTACAATGGGAGTTCAAGAGCAGTCTCAGCCACCTAATGAAACTTTGT
CTCTAAACAAAAGGCTCAGGCAAAGGGGAAGGAAACTGCGTGTGTAGCTAGGTGACAGAGAACT
ACCTGCCTGTGTGGGGAAGCCCTAGTTCACACCTCGGGTATCATGCAAAAATAAAAACACAAGG
AGCTCAAGGAGGGTCTCCTGGAGTGAGTGTGGCGCCTAGGTTCACAGAGAGCTCCCTAGGTTTT
TCAGGAGGAATTCTCACCTTGCTAACTGACATCATGGTAAAATGCAAGCTTCAAAAGCCACTTG
CCCTATTTGTCATAAATTGAGGAGAGCCTAAACTTTGTGGAACTCTACATTGTTGCCACTCATT
ATACAAAACTTCAATTGTATAAAAGTTTGAGACTATAAACTCTAGAGTTGAATATGTTTGTGAG
TATAACCAAAGTAACAAAACTGGTTTCTCAGAAGACTGAGGAGTGCAGAGATATTCTCTTTATT
ACTTCCTTTTTCCTTGCCCTCACAGTAACTCCCCCTGTATCAATTTTTTTCATAATATCTGTAT
TAATTATTTGGGAATTTTACATCATGAACCCTGAGCACACACTCCTCCCATTACTCCCAGGTTT
CCCCAGGCACCCTTGTGGCCTCTCCCACCACCACCACCCCCCCCAAAAGAAGAAAAAGAACTAA
AACAAAAATACCTAACAAGTCCAATTTTTGTTGCCCATGTACTCAATGGAGTATAAAGGCCTGG
TGGCCAGCCCCTTAAAGAAAATTGAGTCCGTTTCCACCCTCGCCCCTGCCAGAGGCCATCAACT
GTGGAGAGCTACACTCCAGTATCCATCCACATCACGGTTTTTAATAGTTCTCTTCAGTGCCTCT
CTGTCTAGGCTGTTCCTTGTGGCGGTGGGGGTTAGCTGTTGTCACAGAAGCCTCCCATACCCCT
CTCTCCTAACTGTGAGTCTGCAGTCGTCAACACCGTGGCAAAAGTCGCTTCCTTGCCCTTCACA
GTCAGCAGGCGCACAGATCACAAACATCCGCGTACTCTCTGGTGCCGGTCAGCCTGAGCCATGG
GCCTCAGCATGGTCTCCAGTAGCAGAACAGACCACGGACGTCAGCACAGACCTCTGCTGCAGTA
GGAACACGGACCCAGACATAGCCCTCAGCAGCAGCGCAGACGCAGACATCATCATGGCCTCAGA
CGGCTACACAGAGCATTCTGATCCATATGGCCCCTGGCAGCAGCACAGCCCACGGACATCCCAC
AGCTATGGATATCATTTGCTAAAATGTCTTACTACACCATTCCTTTTCGTGGGTGGGAATGTAG
TATGTCCGTGCACTGTTGGGTCACATATGCCAGCAGACAAGTGAAGAACAGAGAACAGTTTGCT
GGGGTCGGTTGTCCCTCTACCATGCAGGTACAGGGAGGGAACTCACATGGTCAGGCTTTGCAGC
AAGTGCTGATGCCCACTGAGCCATCTAACAACCCCTCCCCTTGTGTCTTATTTGCTATGAATAC
CTGACATACAGATTTCGAAAAATATTCGTAGGCTGTTTTCACACTCCGCTCTTCAGGTTATAAT
GTTTAACTTAAATTTTTCAAGTATGCAGCTCCTCCATAAAGGCCATTCATCCTGTCTGA

hide sequence

RefSeq Acc Id:

XM_039108622 ⟹ XP_038964550

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,410 - 64,498,987 (+)	NCBI
mRatBN7.2	4	63,452,278 - 63,535,538 (+)	NCBI

RefSeq Acc Id:

XM_039108623 ⟹ XP_038964551

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,432 - 64,487,496 (+)	NCBI
mRatBN7.2	4	63,448,790 - 63,520,349 (+)	NCBI

RefSeq Acc Id:

XM_039108624 ⟹ XP_038964552

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,434 - 64,487,757 (+)	NCBI
mRatBN7.2	4	63,448,790 - 63,520,610 (+)	NCBI

RefSeq Acc Id:

XM_039108626 ⟹ XP_038964554

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,437 - 64,475,565 (+)	NCBI
mRatBN7.2	4	63,448,791 - 63,508,425 (+)	NCBI

RefSeq Acc Id:

XM_039108627 ⟹ XP_038964555

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,442 - 64,460,134 (+)	NCBI
mRatBN7.2	4	63,448,794 - 63,492,987 (+)	NCBI

RefSeq Acc Id:

XM_063286921 ⟹ XP_063142991

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,390 - 64,498,987 (+)	NCBI

RefSeq Acc Id:

XM_063286922 ⟹ XP_063142992

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,442 - 64,490,827 (+)	NCBI

RefSeq Acc Id:

XM_063286923 ⟹ XP_063142993

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,438 - 64,479,860 (+)	NCBI

RefSeq Acc Id:

XM_063286924 ⟹ XP_063142994

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,441 - 64,461,899 (+)	NCBI

RefSeq Acc Id:

XM_063286925 ⟹ XP_063142995

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,440 - 64,449,616 (+)	NCBI

RefSeq Acc Id:

XM_063286926 ⟹ XP_063142996

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,410 - 64,439,084 (+)	NCBI

RefSeq Acc Id:

XM_063286927 ⟹ XP_063142997

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,408 - 64,439,108 (+)	NCBI

RefSeq Acc Id:

XM_063286928 ⟹ XP_063142998

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,432 - 64,439,084 (+)	NCBI

RefSeq Acc Id:

XR_005503510

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,438 - 64,475,565 (+)	NCBI
mRatBN7.2	4	63,448,791 - 63,508,428 (+)	NCBI

RefSeq Acc Id:

XR_005503511

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,442 - 64,461,899 (+)	NCBI
mRatBN7.2	4	63,448,794 - 63,494,794 (+)	NCBI

RefSeq Acc Id:

XR_010066130

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,438 - 64,475,565 (+)	NCBI

RefSeq Acc Id:

XR_010066131

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,443 - 64,475,565 (+)	NCBI

RefSeq Acc Id:

XR_010066132

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,417,442 - 64,475,565 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_006236339	(Get FASTA)	NCBI Sequence Viewer
	XP_017448460	(Get FASTA)	NCBI Sequence Viewer
	XP_038964550	(Get FASTA)	NCBI Sequence Viewer
	XP_038964551	(Get FASTA)	NCBI Sequence Viewer
	XP_038964552	(Get FASTA)	NCBI Sequence Viewer
	XP_038964554	(Get FASTA)	NCBI Sequence Viewer
	XP_038964555	(Get FASTA)	NCBI Sequence Viewer
	XP_063142991	(Get FASTA)	NCBI Sequence Viewer
	XP_063142992	(Get FASTA)	NCBI Sequence Viewer
	XP_063142993	(Get FASTA)	NCBI Sequence Viewer
	XP_063142994	(Get FASTA)	NCBI Sequence Viewer
	XP_063142995	(Get FASTA)	NCBI Sequence Viewer
	XP_063142996	(Get FASTA)	NCBI Sequence Viewer
	XP_063142997	(Get FASTA)	NCBI Sequence Viewer
	XP_063142998	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000034021
	ENSRNOP00000034021.6
	ENSRNOP00000089011.1

RefSeq Acc Id:	XP_006236339 ⟸ XM_006236277
- Peptide Label:	isoform X1
- UniProtKB:	D3ZNU5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEDSEEEDYSDRSISDDDELDEDSFMKFVSDDIHQCTLLTADSIGDPFFPRTTQILLEYQLGR WVPRLREPRDLYGVSSSGPLSPTRWPYHCEVIDEKVQHIEWTPFVPEPVYVPTGLEIEPVYPNS KEDTVVYLAEDAYKEPCFVYSRVGGNRTPLKQPVNSCDNTLVFEARFESGNLQKVVKVADYEYE LTVRPDLFTNKHTQWYYFQVTNTRAEIVYRFTIVNFTKPASLYNRGMRPLFYSEKEAKTHKIGW QRIGDQIKYYKNNLGQDGRHFFSLTWTFQFPHSKDTCYFAHCYPYTYSNLQEYLSGINSDPVRS KFCKIRVLCHTLARNMVYVLTITTPLKTSDAKRKAVILTARVHPGETNSSWIMKGFLDYILGDS SDARLLRDTFIFKVVPMLNPDGVIVGNYRCSLAGRDLNRNYTSLLKESYPSVWYTRNMINRLME KREVILYCDLHGHSRKQNIFMYGCDGSSRSKTKGLYLQQRIFPLMLSKNCPNIFSFSACKFNVQ KSKEGTGRVVMWKMGIRNSFTLEATFCGSTLGNKRGTHFSTKDLELMGYHFCDSLLDYCDPDRS KYYQCLKELEEMEKHMNFERVFDDSDTSLVEISLDVESSSRGSDSSESNDTQTYLLKVTSQAKN KKKYLKTKRERNAILANRQNDMGEVYGKEHLLQRHEESNSDGKDPSVIAPDVYMAHCFRRSSPS RSLVKIPGQRFHPRKSRSSSRRMIKSLNKDHRTYILETCKTPIQEVQSRAMDICESCFRVASLK CPVNKRPSNWIEKTRTPTESNHQLKSKAKRCTSFQSKRTGTNWTDDEKRIYRDKRIARTQEILQ YLLPIVESSKSMKSTQMNNLVNPRANFQQHELIPTACINKRRYSTPWAPTRNLPFKAQTNLMTD NSEWLQSVTQGSFESLSPLCNLQKKTKHFELWVNKAKEGQLATSKWETVPSSSKVDTNVIRGSS LLPPKESTVRSSEQRIPYLSRGIKKPSERNGPLSFPPEVPEEQLAELKVPPRTLAEQDVLTAKV QQPLPALPPSHAHVATKLQSFTNPNFLRGNIFQRS hide sequence

RefSeq Acc Id:	XP_017448460 ⟸ XM_017592971
- Peptide Label:	isoform X1
- UniProtKB:	D3ZNU5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEDSEEEDYSDRSISDDDELDEDSFMKFVSDDIHQCTLLTADSIGDPFFPRTTQILLEYQLGR WVPRLREPRDLYGVSSSGPLSPTRWPYHCEVIDEKVQHIEWTPFVPEPVYVPTGLEIEPVYPNS KEDTVVYLAEDAYKEPCFVYSRVGGNRTPLKQPVNSCDNTLVFEARFESGNLQKVVKVADYEYE LTVRPDLFTNKHTQWYYFQVTNTRAEIVYRFTIVNFTKPASLYNRGMRPLFYSEKEAKTHKIGW QRIGDQIKYYKNNLGQDGRHFFSLTWTFQFPHSKDTCYFAHCYPYTYSNLQEYLSGINSDPVRS KFCKIRVLCHTLARNMVYVLTITTPLKTSDAKRKAVILTARVHPGETNSSWIMKGFLDYILGDS SDARLLRDTFIFKVVPMLNPDGVIVGNYRCSLAGRDLNRNYTSLLKESYPSVWYTRNMINRLME KREVILYCDLHGHSRKQNIFMYGCDGSSRSKTKGLYLQQRIFPLMLSKNCPNIFSFSACKFNVQ KSKEGTGRVVMWKMGIRNSFTLEATFCGSTLGNKRGTHFSTKDLELMGYHFCDSLLDYCDPDRS KYYQCLKELEEMEKHMNFERVFDDSDTSLVEISLDVESSSRGSDSSESNDTQTYLLKVTSQAKN KKKYLKTKRERNAILANRQNDMGEVYGKEHLLQRHEESNSDGKDPSVIAPDVYMAHCFRRSSPS RSLVKIPGQRFHPRKSRSSSRRMIKSLNKDHRTYILETCKTPIQEVQSRAMDICESCFRVASLK CPVNKRPSNWIEKTRTPTESNHQLKSKAKRCTSFQSKRTGTNWTDDEKRIYRDKRIARTQEILQ YLLPIVESSKSMKSTQMNNLVNPRANFQQHELIPTACINKRRYSTPWAPTRNLPFKAQTNLMTD NSEWLQSVTQGSFESLSPLCNLQKKTKHFELWVNKAKEGQLATSKWETVPSSSKVDTNVIRGSS LLPPKESTVRSSEQRIPYLSRGIKKPSERNGPLSFPPEVPEEQLAELKVPPRTLAEQDVLTAKV QQPLPALPPSHAHVATKLQSFTNPNFLRGNIFQRS hide sequence

Ensembl Acc Id:

ENSRNOP00000034021 ⟸ ENSRNOT00000032077

RefSeq Acc Id:	XP_038964552 ⟸ XM_039108624
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038964551 ⟸ XM_039108623
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038964554 ⟸ XM_039108626
- Peptide Label:	isoform X7
- UniProtKB:	A6IEM6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038964555 ⟸ XM_039108627
- Peptide Label:	isoform X8
- UniProtKB:	A6IEM6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038964550 ⟸ XM_039108622
- Peptide Label:	isoform X1
- UniProtKB:	D3ZNU5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000089011 ⟸ ENSRNOT00000113430

RefSeq Acc Id:	XP_063142991 ⟸ XM_063286921
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063142997 ⟸ XM_063286927
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_063142996 ⟸ XM_063286926
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_063142998 ⟸ XM_063286928
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_063142993 ⟸ XM_063286923
- Peptide Label:	isoform X6
- UniProtKB:	A6IEM6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142995 ⟸ XM_063286925
- Peptide Label:	isoform X9
- UniProtKB:	A6IEM6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142994 ⟸ XM_063286924
- Peptide Label:	isoform X8
- UniProtKB:	A6IEM6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142992 ⟸ XM_063286922
- Peptide Label:	isoform X3

Protein Domains

Peptidase M14

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZNU5-F1-model_v2	AlphaFold	D3ZNU5	1-1059	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1561995	AgrOrtholog
BioCyc Gene	G2FUF-45264	BioCyc
Ensembl Genes	ENSRNOG00000010397	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000032077	ENTREZGENE
	ENSRNOT00000032077.9	UniProtKB/TrEMBL
	ENSRNOT00000113430.2	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.3120	UniProtKB/TrEMBL
	Zn peptidases	UniProtKB/TrEMBL
InterPro	Cytosolic_carboxypeptidase	UniProtKB/TrEMBL
	Pepdidase_M14_N	UniProtKB/TrEMBL
	Peptidase_M14	UniProtKB/TrEMBL
KEGG Report	rno:500076	UniProtKB/TrEMBL
NCBI Gene	500076	ENTREZGENE
PANTHER	CYTOSOLIC CARBOXYPEPTIDASE	UniProtKB/TrEMBL
	CYTOSOLIC CARBOXYPEPTIDASE 3	UniProtKB/TrEMBL
Pfam	Pepdidase_M14_N	UniProtKB/TrEMBL
	Peptidase_M14	UniProtKB/TrEMBL
PhenoGen	Agbl3	PhenoGen
PROSITE	PEPTIDASE_M14	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000010397	RatGTEx
Superfamily-SCOP	Zn-dependent exopeptidases	UniProtKB/TrEMBL
UniProt	A0A8I6AJZ5_RAT	UniProtKB/TrEMBL
	A6IEM6	ENTREZGENE, UniProtKB/TrEMBL
	D3ZNU5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-02-18	Agbl3	AGBL carboxypeptidase 3	Agbl3	ATP/GTP binding protein-like 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-02-29	Agbl3	ATP/GTP binding protein-like 3	RGD1561995_predicted	similar to hypothetical protein LOC340351 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1561995_predicted	similar to hypothetical protein LOC340351 (predicted)	LOC500076	similar to hypothetical protein LOC340351	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC500076	similar to hypothetical protein LOC340351			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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