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Gene: Zfp467 (zinc finger protein 467) Rattus norvegicus

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Symbol:

Zfp467

Name:

zinc finger protein 467

RGD ID:

1561603

Description:

Predicted to enable DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of DNA-templated transcription. Predicted to be active in nucleus. Orthologous to human ZNF467 (zinc finger protein 467); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC500110; similar to zinc finger protein EZI; Znf467

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZNF467 (zinc finger protein 467)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Zfp467 (zinc finger protein 467)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Znf467 (zinc finger protein 467)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ZNF467 (zinc finger protein 467)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ZNF467 (zinc finger protein 467)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Znf467 (zinc finger protein 467)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ZNF467 (zinc finger protein 467)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ZNF467 (zinc finger protein 467)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Znf467 (zinc finger protein 467)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Znf467 (zinc finger protein 467)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ZNF467 (zinc finger protein 467)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Zfp467 (zinc finger protein 467)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG6689	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	smc1b	Alliance	DIOPT (Ensembl Compara\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	78,716,473 - 78,725,829 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	78,716,666 - 78,723,135 (-)	Ensembl				GRCr8
mRatBN7.2	4	77,385,752 - 77,394,709 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	77,385,758 - 77,392,229 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	82,592,774 - 82,599,231 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	78,368,279 - 78,374,736 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	76,808,551 - 76,815,008 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	78,068,822 - 78,077,962 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	78,067,689 - 78,075,398 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	142,732,559 - 142,741,652 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	76,522,000 - 76,528,470 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	72,323,491 - 72,329,961 (-)	NCBI		Celera
Cytogenetic Map	4	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4,4'-trichlorobiphenyl (ISO)

2-amino-2-deoxy-D-glucopyranose (ISO)

3,3',5,5'-tetrabromobisphenol A (EXP)

3,4-methylenedioxymethamphetamine (ISO)

3-methylcholanthrene (ISO)

4,4'-sulfonyldiphenol (ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

afimoxifene (ISO)

aldehydo-D-glucosamine (ISO)

all-trans-retinoic acid (EXP)

amitrole (EXP)

arsane (ISO)

arsenic atom (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

Benzo[k]fluoranthene (ISO)

beta-D-glucosamine (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

clothianidin (ISO)

coumestrol (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

cytarabine (ISO)

DDE (ISO)

dibutyl phthalate (ISO)

diethyl phthalate (ISO)

diisobutyl phthalate (ISO)

diisononyl phthalate (ISO)

dioxygen (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

Enterolactone (ISO)

entinostat (ISO)

epoxiconazole (ISO)

folic acid (ISO)

furan (EXP,ISO)

gardiquimod (ISO)

gentamycin (EXP)

geraniol (ISO)

glafenine (EXP)

lead diacetate (ISO)

lipopolysaccharide (ISO)

methimazole (EXP)

methylmercury chloride (ISO)

N-methylformamide (ISO)

niclosamide (ISO)

okadaic acid (ISO)

paracetamol (EXP,ISO)

paraquat (EXP)

PCB138 (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

pregnenolone 16alpha-carbonitrile (ISO)

propiconazole (EXP,ISO)

protein kinase inhibitor (ISO)

resveratrol (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenate (ISO)

Soman (EXP)

sulfadimethoxine (EXP)

tamoxifen (ISO)

tetrachloromethane (EXP,ISO)

thapsigargin (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

triphenyl phosphate (EXP,ISO)

tunicamycin (ISO)

valproic acid (ISO)

vorinostat (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA-templated transcription (IEA)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

nucleus (IBA,IEA)

Molecular Function

DNA binding (IEA)

metal ion binding (IEA)

protein binding (ISO)

transcription cis-regulatory region binding (IBA)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
4.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:12426389	PMID:15489334

Genomics

Comparative Map Data

Zfp467
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	78,716,473 - 78,725,829 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	78,716,666 - 78,723,135 (-)	Ensembl				GRCr8
mRatBN7.2	4	77,385,752 - 77,394,709 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	77,385,758 - 77,392,229 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	82,592,774 - 82,599,231 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	78,368,279 - 78,374,736 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	76,808,551 - 76,815,008 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	78,068,822 - 78,077,962 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	78,067,689 - 78,075,398 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	142,732,559 - 142,741,652 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	76,522,000 - 76,528,470 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	72,323,491 - 72,329,961 (-)	NCBI		Celera
Cytogenetic Map	4	q24	NCBI

ZNF467
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	149,764,182 - 149,776,530 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	149,764,175 - 149,776,519 (-)	Ensembl			hg38	GRCh38
GRCh37	7	149,461,271 - 149,470,677 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	149,092,385 - 149,101,228 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	7	148,899,099 - 148,907,943	NCBI
Celera	7	144,130,665 - 144,139,508 (-)	NCBI		Celera
Cytogenetic Map	7	q36.1	NCBI
HuRef	7	143,537,596 - 143,546,157 (-)	NCBI		HuRef
CHM1_1	7	149,470,029 - 149,478,877 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	150,946,102 - 150,958,226 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	148,799,466 - 148,808,309 (-)	NCBI

Zfp467
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	48,404,626 - 48,422,926 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	48,404,631 - 48,422,759 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	6	48,427,692 - 48,445,992 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	48,427,697 - 48,445,825 (-)	Ensembl			mm10	GRCm38
MGSCv37	6	48,377,691 - 48,395,824 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	6	48,367,172 - 48,375,193 (-)	NCBI		MGSCv36	mm8
Celera	6	48,931,752 - 48,949,878 (-)	NCBI		Celera
Cytogenetic Map	6	B2.3	NCBI
cM Map	6	23.39	NCBI

Znf467
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955491	4,830,708 - 4,838,316 (-)	Ensembl
ChiLan1.0	NW_004955491	4,830,708 - 4,838,316 (-)	NCBI	ChiLan1.0	ChiLan1.0

ZNF467
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	186,321,316 - 186,331,721 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	38,331,580 - 38,343,808 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	141,467,591 - 141,477,027 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	153,941,109 - 153,948,017 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	153,941,302 - 153,948,017 (-)	Ensembl			panPan2	panpan1.1

ZNF467
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	14,526,314 - 14,544,694 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	14,536,854 - 14,544,694 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	15,135,211 - 15,154,916 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	16,241,362 - 16,261,098 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	16,251,927 - 16,257,826 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	14,621,448 - 14,641,158 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	15,202,256 - 15,221,990 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	15,252,418 - 15,272,150 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Znf467
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	7,083,477 - 7,096,191 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936527	5,813,683 - 5,819,957 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936527	5,813,384 - 5,819,581 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZNF467
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	55,775,264 - 55,783,421 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	18	55,774,875 - 55,783,562 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	61,101,603 - 61,110,759 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZNF467
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	118,330,429 - 118,339,588 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	118,330,789 - 118,337,079 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666072	14,288,855 - 14,297,781 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Znf467
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624800	6,247,088 - 6,253,292 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624800	6,245,569 - 6,253,054 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Znf467
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	6	92,523,142 - 92,531,739 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Zfp467
43 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	506
Count of miRNA genes:	262
Interacting mature miRNAs:	315
Transcripts:	ENSRNOT00000010377
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1358352	Srcrt3	Stress Responsive Cort QTL 3	2.29		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	39431983	123203361	Rat
1549843	Bw53	Body weight QTL 53		0.0001	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	59753119	104753119	Rat
61445	Strs3	Sensitivity to stroke QTL 3	3		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	4	41400577	86400577	Rat
6893678	Bw108	Body weight QTL 108	2.6	0.006	body mass (VT:0001259)	body weight (CMO:0000012)	4	44425024	89425024	Rat
10755501	Bp390	Blood pressure QTL 390	2.5		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	4	27730518	170099664	Rat
1357342	Bw40	Body weight QTL 40		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	4	74233320	119233320	Rat
1358363	Sradr3	Stress Responsive Adrenal Weight QTL 3	6.19		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	4	58817672	103817672	Rat
61330	Eau1	Experimental allergic uveoretinitis QTL 1		0.0003	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	4	26234499	134199155	Rat
70167	Bw22	Body weight QTL 22	3.1		body mass (VT:0001259)	body weight (CMO:0000012)	4	74233320	119233320	Rat
61336	Bp21	Blood pressure QTL 21	4.6		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	58080146	80212111	Rat
1549839	Bw52	Body weight QTL 52		0.0001	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	71647492	116647492	Rat
6909128	Pancm4	Pancreatic morphology QTL 4	11.35		pancreas mass (VT:0010144)	pancreas wet weight (CMO:0000626)	4	27862204	126119996	Rat
8694439	Bw168	Body weight QTL 168	9.57	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	4	41400603	86400603	Rat
61476	Aia3	Adjuvant induced arthritis QTL 3	3.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	75939858	140508796	Rat
8655906	Rf60	Renal function QTL 60	3.8		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	4	30448961	82336920	Rat
1641919	Alc22	Alcohol consumption QTL 22		0.0005	drinking behavior trait (VT:0001422)	ethanol drink intake rate (CMO:0001407)	4	65060960	127749483	Rat
1354660	Salc1	Saline consumption QTL 1	11.26		drinking behavior trait (VT:0001422)	saline drink intake rate (CMO:0001627)	4	45429897	149763204	Rat
1298082	Stresp4	Stress response QTL 4			blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	51085655	113588029	Rat
2317588	Eae27	Experimental allergic encephalomyelitis QTL 27			nervous system integrity trait (VT:0010566)	percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)	4	69036742	114036742	Rat
1300139	Hrtrt6	Heart rate QTL 6	2.85		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	4	40490442	117737312	Rat
70200	Alc18	Alcohol consumption QTL 18	9.2		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	4	57613339	151163960	Rat
4889969	Bss96	Bone structure and strength QTL 96	4.9		tibia size trait (VT:0100001)	tibia cortical bone volume (CMO:0001725)	4	57613242	102613242	Rat
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	12212457	182430611	Rat
4889972	Bss97	Bone structure and strength QTL 97	5.6		tibia size trait (VT:0100001)	tibia total bone volume (CMO:0001724)	4	57613242	102613242	Rat
6478684	Anxrr30	Anxiety related response QTL 30		0.00087	defecation behavior trait (VT:0010462)	defecation rate (CMO:0000998)	4	64084079	109084079	Rat
5685012	Bmd87	Bone mineral density QTL 87	5.1		tibia mineral mass (VT:1000283)	bone mineral content (CMO:0001554)	4	35113290	80113290	Rat
5685009	Bmd86	Bone mineral density QTL 86	3.7		tibia mineral mass (VT:1000283)	bone mineral density (CMO:0001226)	4	57613242	102613242	Rat
634311	Sach7	Saccharin preference QTL 7			taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	58079875	82597589	Rat
2306547	Iddm38	Insulin dependent diabetes mellitus QTL 38			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	68353567	113353567	Rat
738009	Sach4	Saccharine consumption QTL 4	4.9	0.000016	consumption behavior trait (VT:0002069)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	60916264	184426481	Rat
2306545	Iddm39	Insulin dependent diabetes mellitus QTL 39			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	78687630	123687630	Rat
631261	Tcas3	Tongue tumor susceptibility QTL 3	6.88		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	4	11706604	92690519	Rat
6478772	Anxrr49	Anxiety related response QTL 49		0.15488	defecation behavior trait (VT:0010462)	defecation rate (CMO:0000998)	4	64084079	109084079	Rat
631646	Stl4	Serum triglyceride level QTL 4	6.5	0.0001	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	4	74169813	134199155	Rat
2312569	Pur19	Proteinuria QTL 19	3.4	0.001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	4	59836842	104836842	Rat
8655961	Kidm43	Kidney mass QTL 43	18		kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	4	37269577	82269577	Rat
61406	Scwia1	Streptococcal cell wall induced arthritis QTL 1	2.3		joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	4	75939858	140508796	Rat
1354612	Foco1	Food consumption QTL 1	8.87		eating behavior trait (VT:0001431)	food intake rate (CMO:0000427)	4	45429897	149763204	Rat
634344	Hcar7	Hepatocarcinoma resistance QTL 7	7.8		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	4	61041057	94638356	Rat
2303168	Bp330	Blood pressure QTL 330	4.25	0.017	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	5889999	148002343	Rat
738031	Alc14	Alcohol consumption QTL 14	7.6	0.00003	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	174095838	Rat
1576305	Emca6	Estrogen-induced mammary cancer QTL 6	5.8		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	4	45429709	157555683	Rat
61418	Pia5	Pristane induced arthritis QTL 5	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	63245026	129846354	Rat
631651	Bp124	Blood pressure QTL 124	3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	64209744	109209744	Rat
738016	Alc16	Alcohol consumption QTL 16	3.6	0.00015	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	184426481	Rat
1558651	Swd3	Spike wave discharge measurement QTL 3	4.62	0.000024	brain electrophysiology trait (VT:0010557)	brain spike-and-wave discharge frequency (CMO:0001742)	4	41400577	86400577	Rat
1641833	Alc21	Alcohol consumption QTL 21	8.6	0.0001	drinking behavior trait (VT:0001422)	ethanol drink intake rate (CMO:0001407)	4	57664252	127749483	Rat
631546	Bp86	Blood pressure QTL 86	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	58079875	92690793	Rat
631674	Iddm14	Insulin dependent diabetes mellitus QTL 14			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	4	65495851	159259805	Rat
6478743	Anxrr40	Anxiety related response QTL 40		0.83076	defecation behavior trait (VT:0010462)	defecation rate (CMO:0000998)	4	64084079	109084079	Rat
61434	Cia3	Collagen induced arthritis QTL 3	4.8		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	63224393	108224393	Rat
7394826	Bw126	Body weight QTL 126		0.002	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	63900458	88813920	Rat
12798520	Anxrr55	Anxiety related response QTL 55	4.45	0.01	locomotor behavior trait (VT:0001392)	number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)	4	33538597	116185060	Rat
631671	Iddm11	Insulin dependent diabetes mellitus QTL 11	3.6	0.0012	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	4	59603319	80216952	Rat

Markers in Region

RH132078

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	77,385,804 - 77,385,984 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	78,069,059 - 78,069,238	NCBI	Rnor6.0
Rnor_5.0	4	142,732,612 - 142,732,791	UniSTS	Rnor5.0
RGSC_v3.4	4	76,522,048 - 76,522,227	UniSTS	RGSC3.4
Celera	4	72,323,539 - 72,323,718	UniSTS
RH 3.4 Map	4	512.03	UniSTS
Cytogenetic Map	4	q24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	92	59	6	356	192	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001024327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006236431	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006236432	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006236433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006236434	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC123494	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC086534	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000010377 ⟹ ENSRNOP00000010377

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	78,716,666 - 78,723,135 (-)	Ensembl
mRatBN7.2 Ensembl	4	77,385,758 - 77,392,229 (-)	Ensembl
Rnor_6.0 Ensembl	4	78,069,978 - 78,075,398 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000080654 ⟹ ENSRNOP00000073578

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	4	78,067,689 - 78,074,906 (-)	Ensembl

RefSeq Acc Id:

NM_001024327 ⟹ NP_001019498

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	78,716,665 - 78,723,135 (-)	NCBI
mRatBN7.2	4	77,385,757 - 77,392,229 (-)	NCBI
Rnor_6.0	4	78,069,011 - 78,075,481 (-)	NCBI
Rnor_5.0	4	142,732,559 - 142,741,652 (-)	NCBI
RGSC_v3.4	4	76,522,000 - 76,528,470 (-)	RGD
Celera	4	72,323,491 - 72,329,961 (-)	RGD

Sequence:

show sequence

GATAGCTGAGAGGAAGAATCTGAACAGGGCTATCTTTTTAGGGTCTGTGGCCTGATCACCTAGG
AGAGCCACTCCTGGTGGCCATGAGAGAGACCCTGGAGGCCCTGAACTCTTTGGGATTCTCAGTG
GGACAGCCAGAGATGGCACCCCAAAGTGAGCCCAGGGATGGGTTCAGTAATCCCCAGGAGAAGA
TGTCATCTAGAGATGAGAGCACACTGCACTCATGCTCAGGGCCTGAGACCCCTGGCCAGAAAGA
AGGTATCCACACAGAACAAGCTGAAGCTCCTTGTATGGGCAGCCAGGCCTGTATCCCACAGAAG
GCCGAGCCTGCAAGCTCTGTCCCAGGGGAGGAATGGATGATTCGGAAAGTGAAGGTAGAGGATG
AGGACCAGGAGGCAGAGGAGGAGGTGGAATGGCCCCAGCATCTCTCCTTCCTTCCCAGTCCTTT
TCCTACTCCTGACTTGGGTCAGTTGGCTGTTGCATACAAACTGGAGCCAGGGACTCCGGGGACA
CTAGGTGGAATCGCGCTGTCCGGGTGGGCGCCGATCCCTGAAAAGCCTTATGGCTGCGAGGAAT
GCGAGCGGCGATTCCGGGACCAGCTAACTCTGCGGCTGCATCAGAGGTTGCACCGGGGTGAGGG
TCCTTGTGCCTGCCCGGACTGTGGCCGCAGCTTCACGCAGCGTGCTCATATGCTTCTGCACCAA
CGCAGCCACCGCGGAGAGCGTCCCTTCCCGTGCTCAGAGTGCGATAAGCGTTTCAGCAAGAAAG
CCCACCTGACCCGTCACCTGCGCACTCACACTGGCGAGCGTCCCTACCCGTGCGCCGAATGCGG
CAAACGCTTCAGCCAGAAGATTCACCTAGGCTCGCACCAGAAGACCCACACTGGCGAGCGGCCC
TTCCCCTGCACGGAATGCGAGAAGCGTTTCCGCAAGAAGACGCACCTGATCCGCCACCAGCGTA
TCCACACAGGTGAGAGGCCCTACCAGTGCACCCAGTGTACACGCAGCTTCACCCACAAGCAACA
TCTGGTGAGGCACCAGAGGGTGCACGATGCTGCTAGCCGCACCCGGTCCTCTCCCGACATTCCT
GCTACTCCCCATCCCCCGACCGCGTCTCTTGCCCCATCCCCTACTGGGCCCAAGCCTTTCGCCT
GCTCCCATTGCGGGCAGAGCTTTGGCTGGAAAAAGAACCTCGCTACGCATCAGAGTCTGCACCT
CACCGAGGGTCGTCCTTTTGGGTGCGATGAATGTGCACTCGGCACCAACGTGGACCCCGCTGCC
GAGCCCTCCGCCTGCACTCCCCATGCGCCTGACTGTGGCCCGGGTTCGGGGCCCGTGGCACCCC
AGCGCACGACCTCTAGCGAGCGCTCCTTCTTCTGCCCCGACTGCGGGCGCGGCTTCGCCCACGG
GCAGCACCTGGCCCGGCACCGGCGCGTGCACACGGGTGAAAGGCCATTTGCCTGTGCTCAGTGT
GGCCGCCGCTTCGGCTCACGACCCAATCTAGTCGCCCACTCCCGGGCTCACAGCGGCGCCAGAC
CTTTTGCCTGTGCACAGTGTGGCCGCCGCTTCAGTCGGAAATCTCACCTGGGCCGCCACCAGGC
AGTGCACACTGGCAGCCGCCCCCACGCTTGCGCCGTCTGCGCCCGCTGCTTCAGCTCCAAAACC
AACCTGGTCCGCCACCAGGCGATCCATACGGGCTCCCGTCCCTTTTCCTGCCCTCAGTGCGCCA
AGAGCTTCAGCCGCAAGACCCACCTGGTGCGGCACCAACGCATCCATGGAGAAGCGGCCCTCCC
AGCCTCAGCCTCAAACCTCTCTGCTCCAGCCTGGTCCAATCCCTCCGAGGTGGTACCGCCTCCA
ATCTTCTTCTAAGCCGAATTCTGACCCGCACCCTGCCTTTCCCGACAGATTTGGGAGACTAAGT
GGGTTTTCAATATTCACACCTAGGTTGCTGCCAAAGCACCAGGACACTTGAGTCTTTGTCCTTT
CTTGAATGTTAGTTAAGAAGTCCGAAAAACATACTTAGCTCTTGACAGTTACGACAAAGAACAC
AGAGAGACTACCCTTGCAGATACCACACTGAGAACCAGACATTTCTGGGGATCAACCAGGTCAA
GGGGAGACTGACTGAGCAGGAAACCTCTAAATAGAAGGAAAGAATAGTTATTTATGTACTTGAA
GGTCATTAACGTTCAGATCTGAAGTCCTGGGGCTGTTCACTGAGCCAGGGGAGGAAAGCCTGAC
TCTTGTACTCACTGCCACCTCCAACCACAGGAAAAGACCTTTCCTGTCAGTTCAGGGAAGTAAA
CCTAGCTAGCTGGTTCTTCCCAACCAAAGTGTATTATTCACAGATGCCAAACAACTACCATGGT
TCCGTGCGCGCTCGTGTGTCTGTGTCACACAAGTTTGGCTTGGAGGGGGAGGTGAGGACCAAAG
GACCAAAGGCTGCTCCCAGGGGCCCAGCATTATTACTGTAGGTGCTGCAGCTCCATACCACCTG
TTTGCAGCCCTTTGAGAGGCTTCCCAGAAGCATCCTTACGTGCACCTGCCTAGGAGGTAAAGAG
GAGGCAGTGCTTGAACAGGCCATTAAAAGTTGTTTCTATGTTGCCTTTTCGACCAGTTGTCTCC
TTGTGAGGAGTGCTGGAGCCTGAAGACACTACAACTGTACACCCACCTGGGCTGACAGCAGCAG
AGGGGCTGCCTGACGAGAGGGAGCAGTGGGGGGATGGGGTCTGAGTTTAGAGAGAACTATTTTG
GATTCGACCTCTTAGAGAACTTGGAGGGAAGCCTTTACTCTCCTGGAACTTCAATTTCTCATTA
AAACGAGAGCTGGTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006236431 ⟹ XP_006236493

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	78,716,473 - 78,724,490 (-)	NCBI
mRatBN7.2	4	77,385,752 - 77,393,593 (-)	NCBI
Rnor_6.0	4	78,068,822 - 78,076,916 (-)	NCBI
Rnor_5.0	4	142,732,559 - 142,741,652 (-)	NCBI

Sequence:

show sequence

CTAGAGCTGGGCAAGGGGCCGGGACCCGGAGTGACTCCGGAGCGCTAACAGGGGCGGGGATTGG
GGGGAATCTAGTCAGAAGGAAAACTCCGGAGAGGGCGTGAAGTCAGTGGGGAGCAGAAATGGGG
TCTGTGGCCTGATCACCTAGGAGAGCCACTCCTGGTGGCCATGAGAGAGACCCTGGAGGCCCTG
AACTCTTTGGGATTCTCAGTGGGACAGCCAGAGATGGCACCCCAAAGTGAGCCCAGGGATGGGT
TCAGTAATCCCCAGGAGAAGATGTCATCTAGAGATGAGAGCACACTGCACTCATGCTCAGGGCC
TGAGACCCCTGGCCAGAAAGAAGGTATCCACACAGAACAAGCTGAAGCTCCTTGTATGGGCAGC
CAGGCCTGTATCCCACAGAAGGCCGAGCCTGCAAGCTCTGTCCCAGGGGAGGAATGGATGATTC
GGAAAGTGAAGGTAGAGGATGAGGACCAGGAGGCAGAGGAGGAGGTGGAATGGCCCCAGCATCT
CTCCTTCCTTCCCAGTCCTTTTCCTACTCCTGACTTGGGTCAGTTGGCTGTTGCATACAAACTG
GAGCCAGGGACTCCGGGGACACTAGGTGGAATCGCGCTGTCCGGGTGGGCGCCGATCCCTGAAA
AGCCTTATGGCTGCGAGGAATGCGAGCGGCGATTCCGGGACCAGCTAACTCTGCGGCTGCATCA
GAGGTTGCACCGGGGTGAGGGTCCTTGTGCCTGCCCGGACTGTGGCCGCAGCTTCACGCAGCGT
GCTCATATGCTTCTGCACCAACGCAGCCACCGCGGAGAGCGTCCCTTCCCGTGCTCAGAGTGCG
ATAAGCGTTTCAGCAAGAAAGCCCACCTGACCCGTCACCTGCGCACTCACACTGGCGAGCGTCC
CTACCCGTGCGCCGAATGCGGCAAACGCTTCAGCCAGAAGATTCACCTAGGCTCGCACCAGAAG
ACCCACACTGGCGAGCGGCCCTTCCCCTGCACGGAATGCGAGAAGCGTTTCCGCAAGAAGACGC
ACCTGATCCGCCACCAGCGTATCCACACAGGTGAGAGGCCCTACCAGTGCACCCAGTGTACACG
CAGCTTCACCCACAAGCAACATCTGGTGAGGCACCAGAGGGTGCACGATGCTGCTAGCCGCACC
CGGTCCTCTCCCGACATTCCTGCTACTCCCCATCCCCCGACCGCGTCTCTTGCCCCATCCCCTA
CTGGGCCCAAGCCTTTCGCCTGCTCCCATTGCGGGCAGAGCTTTGGCTGGAAAAAGAACCTCGC
TACGCATCAGAGTCTGCACCTCACCGAGGGTCGTCCTTTTGGGTGCGATGAATGTGCACTCGGC
ACCAACGTGGACCCCGCTGCCGAGCCCTCCGCCTGCACTCCCCATGCGCCTGACTGTGGCCCGG
GTTCGGGGCCCGTGGCACCCCAGCGCACGACCTCTAGCGAGCGCTCCTTCTTCTGCCCCGACTG
CGGGCGCGGCTTCGCCCACGGGCAGCACCTGGCCCGGCACCGGCGCGTGCACACGGGTGAAAGG
CCATTTGCCTGTGCTCAGTGTGGCCGCCGCTTCGGCTCACGACCCAATCTAGTCGCCCACTCCC
GGGCTCACAGCGGCGCCAGACCTTTTGCCTGTGCACAGTGTGGCCGCCGCTTCAGTCGGAAATC
TCACCTGGGCCGCCACCAGGCAGTGCACACTGGCAGCCGCCCCCACGCTTGCGCCGTCTGCGCC
CGCTGCTTCAGCTCCAAAACCAACCTGGTCCGCCACCAGGCGATCCATACGGGCTCCCGTCCCT
TTTCCTGCCCTCAGTGCGCCAAGAGCTTCAGCCGCAAGACCCACCTGGTGCGGCACCAACGCAT
CCATGGAGAAGCGGCCCTCCCAGCCTCAGCCTCAAACCTCTCTGCTCCAGCCTGGTCCAATCCC
TCCGAGGTGGTACCGCCTCCAATCTTCTTCTAAGCCGAATTCTGACCCGCACCCTGCCTTTCCC
GACAGATTTGGGAGACTAAGTGGGTTTTCAATATTCACACCTAGGTTGCTGCCAAAGCACCAGG
ACACTTGAGTCTTTGTCCTTTCTTGAATGTTAGTTAAGAAGTCCGAAAAACATACTTAGCTCTT
GACAGTTACGACAAAGAACACAGAGAGACTACCCTTGCAGATACCACACTGAGAACCAGACATT
TCTGGGGATCAACCAGGTCAAGGGGAGACTGACTGAGCAGGAAACCTCTAAATAGAAGGAAAGA
ATAGTTATTTATGTACTTGAAGGTCATTAACGTTCAGATCTGAAGTCCTGGGGCTGTTCACTGA
GCCAGGGGAGGAAAGCCTGACTCTTGTACTCACTGCCACCTCCAACCACAGGAAAAGACCTTTC
CTGTCAGTTCAGGGAAGTAAACCTAGCTAGCTGGTTCTTCCCAACCAAAGTGTATTATTCACAG
ATGCCAAACAACTACCATGGTTCCGTGCGCGCTCGTGTGTCTGTGTCACACAAGTTTGGCTTGG
AGGGGGAGGTGAGGACCAAAGGACCAAAGGCTGCTCCCAGGGGCCCAGCATTATTACTGTAGGT
GCTGCAGCTCCATACCACCTGTTTGCAGCCCTTTGAGAGGCTTCCCAGAAGCATCCTTACGTGC
ACCTGCCTAGGAGGTAAAGAGGAGGCAGTGCTTGAACAGGCCATTAAAAGTTGTTTCTATGTTG
CCTTTTCGACCAGTTGTCTCCTTGTGAGGAGTGCTGGAGCCTGAAGACACTACAACTGTACACC
CACCTGGGCTGACAGCAGCAGAGGGGCTGCCTGACGAGAGGGAGCAGTGGGGGGATGGGGTCTG
AGTTTAGAGAGAACTATTTTGGATTCGACCTCTTAGAGAACTTGGAGGGAAGCCTTTACTCTCC
TGGAACTTCAATTTCTCATTAAAACGAGAGCTGGTGTTGATGAAAGCGGAGACTCCTTTCTATC
CTATTACTAGATTACTAACTACAAAAATACCCAAGGCAACCGTCTCCTGGGTGCTAAGCACTGG
GAAAGGTCAGGAGCCAGCTAGCAAGGATCCTTCCATCACAGCTTAAGTGGGTTTCCTGGTTTGT
GCTTACTGTTGCTGTGATTAAATGCTGACCTTGAGCA

hide sequence

RefSeq Acc Id:

XM_006236432 ⟹ XP_006236494

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	78,716,473 - 78,724,800 (-)	NCBI
mRatBN7.2	4	77,385,752 - 77,393,810 (-)	NCBI
Rnor_6.0	4	78,068,822 - 78,077,300 (-)	NCBI
Rnor_5.0	4	142,732,559 - 142,741,652 (-)	NCBI

Sequence:

show sequence

ACACCGAGGCTCCGGAGCAGGCATCTCCGCCCGCCACCCAAACGGAGCTTTACAAGCCCTGCCG
GCTCACGGCAGGTGACAACCCCGAGGGAAGGGGCGCGCAGACGCGAGTGTGGGGGAGGGGCGGG
GGTCAGAAGAGGGAGGGAAGGGAGTCAGGAGGGAGGGTCCAGGCGCAGAGGGGGAGACTAGGAA
ACTGGAGGGGATGGCAAGGACTAGAAGAGGCCCGGTGGGAGCAGGTGGGAAGAGGGCAGGAGGG
GCCTGCGGGGAGGATCCCAAGGAGCGGGAGTAGGGTTCCTCGGGATAGGGGAAGGGTCCAGCGC
GAAGGGGCAGGAAACGGGCTCAGGGATGGGACTGGTCGGGAGCGAAGGACGCTGACAGGGTCTG
TGGCCTGATCACCTAGGAGAGCCACTCCTGGTGGCCATGAGAGAGACCCTGGAGGCCCTGAACT
CTTTGGGATTCTCAGTGGGACAGCCAGAGATGGCACCCCAAAGTGAGCCCAGGGATGGGTTCAG
TAATCCCCAGGAGAAGATGTCATCTAGAGATGAGAGCACACTGCACTCATGCTCAGGGCCTGAG
ACCCCTGGCCAGAAAGAAGGTATCCACACAGAACAAGCTGAAGCTCCTTGTATGGGCAGCCAGG
CCTGTATCCCACAGAAGGCCGAGCCTGCAAGCTCTGTCCCAGGGGAGGAATGGATGATTCGGAA
AGTGAAGGTAGAGGATGAGGACCAGGAGGCAGAGGAGGAGGTGGAATGGCCCCAGCATCTCTCC
TTCCTTCCCAGTCCTTTTCCTACTCCTGACTTGGGTCAGTTGGCTGTTGCATACAAACTGGAGC
CAGGGACTCCGGGGACACTAGGTGGAATCGCGCTGTCCGGGTGGGCGCCGATCCCTGAAAAGCC
TTATGGCTGCGAGGAATGCGAGCGGCGATTCCGGGACCAGCTAACTCTGCGGCTGCATCAGAGG
TTGCACCGGGGTGAGGGTCCTTGTGCCTGCCCGGACTGTGGCCGCAGCTTCACGCAGCGTGCTC
ATATGCTTCTGCACCAACGCAGCCACCGCGGAGAGCGTCCCTTCCCGTGCTCAGAGTGCGATAA
GCGTTTCAGCAAGAAAGCCCACCTGACCCGTCACCTGCGCACTCACACTGGCGAGCGTCCCTAC
CCGTGCGCCGAATGCGGCAAACGCTTCAGCCAGAAGATTCACCTAGGCTCGCACCAGAAGACCC
ACACTGGCGAGCGGCCCTTCCCCTGCACGGAATGCGAGAAGCGTTTCCGCAAGAAGACGCACCT
GATCCGCCACCAGCGTATCCACACAGGTGAGAGGCCCTACCAGTGCACCCAGTGTACACGCAGC
TTCACCCACAAGCAACATCTGGTGAGGCACCAGAGGGTGCACGATGCTGCTAGCCGCACCCGGT
CCTCTCCCGACATTCCTGCTACTCCCCATCCCCCGACCGCGTCTCTTGCCCCATCCCCTACTGG
GCCCAAGCCTTTCGCCTGCTCCCATTGCGGGCAGAGCTTTGGCTGGAAAAAGAACCTCGCTACG
CATCAGAGTCTGCACCTCACCGAGGGTCGTCCTTTTGGGTGCGATGAATGTGCACTCGGCACCA
ACGTGGACCCCGCTGCCGAGCCCTCCGCCTGCACTCCCCATGCGCCTGACTGTGGCCCGGGTTC
GGGGCCCGTGGCACCCCAGCGCACGACCTCTAGCGAGCGCTCCTTCTTCTGCCCCGACTGCGGG
CGCGGCTTCGCCCACGGGCAGCACCTGGCCCGGCACCGGCGCGTGCACACGGGTGAAAGGCCAT
TTGCCTGTGCTCAGTGTGGCCGCCGCTTCGGCTCACGACCCAATCTAGTCGCCCACTCCCGGGC
TCACAGCGGCGCCAGACCTTTTGCCTGTGCACAGTGTGGCCGCCGCTTCAGTCGGAAATCTCAC
CTGGGCCGCCACCAGGCAGTGCACACTGGCAGCCGCCCCCACGCTTGCGCCGTCTGCGCCCGCT
GCTTCAGCTCCAAAACCAACCTGGTCCGCCACCAGGCGATCCATACGGGCTCCCGTCCCTTTTC
CTGCCCTCAGTGCGCCAAGAGCTTCAGCCGCAAGACCCACCTGGTGCGGCACCAACGCATCCAT
GGAGAAGCGGCCCTCCCAGCCTCAGCCTCAAACCTCTCTGCTCCAGCCTGGTCCAATCCCTCCG
AGGTGGTACCGCCTCCAATCTTCTTCTAAGCCGAATTCTGACCCGCACCCTGCCTTTCCCGACA
GATTTGGGAGACTAAGTGGGTTTTCAATATTCACACCTAGGTTGCTGCCAAAGCACCAGGACAC
TTGAGTCTTTGTCCTTTCTTGAATGTTAGTTAAGAAGTCCGAAAAACATACTTAGCTCTTGACA
GTTACGACAAAGAACACAGAGAGACTACCCTTGCAGATACCACACTGAGAACCAGACATTTCTG
GGGATCAACCAGGTCAAGGGGAGACTGACTGAGCAGGAAACCTCTAAATAGAAGGAAAGAATAG
TTATTTATGTACTTGAAGGTCATTAACGTTCAGATCTGAAGTCCTGGGGCTGTTCACTGAGCCA
GGGGAGGAAAGCCTGACTCTTGTACTCACTGCCACCTCCAACCACAGGAAAAGACCTTTCCTGT
CAGTTCAGGGAAGTAAACCTAGCTAGCTGGTTCTTCCCAACCAAAGTGTATTATTCACAGATGC
CAAACAACTACCATGGTTCCGTGCGCGCTCGTGTGTCTGTGTCACACAAGTTTGGCTTGGAGGG
GGAGGTGAGGACCAAAGGACCAAAGGCTGCTCCCAGGGGCCCAGCATTATTACTGTAGGTGCTG
CAGCTCCATACCACCTGTTTGCAGCCCTTTGAGAGGCTTCCCAGAAGCATCCTTACGTGCACCT
GCCTAGGAGGTAAAGAGGAGGCAGTGCTTGAACAGGCCATTAAAAGTTGTTTCTATGTTGCCTT
TTCGACCAGTTGTCTCCTTGTGAGGAGTGCTGGAGCCTGAAGACACTACAACTGTACACCCACC
TGGGCTGACAGCAGCAGAGGGGCTGCCTGACGAGAGGGAGCAGTGGGGGGATGGGGTCTGAGTT
TAGAGAGAACTATTTTGGATTCGACCTCTTAGAGAACTTGGAGGGAAGCCTTTACTCTCCTGGA
ACTTCAATTTCTCATTAAAACGAGAGCTGGTGTTGATGAAAGCGGAGACTCCTTTCTATCCTAT
TACTAGATTACTAACTACAAAAATACCCAAGGCAACCGTCTCCTGGGTGCTAAGCACTGGGAAA
GGTCAGGAGCCAGCTAGCAAGGATCCTTCCATCACAGCTTAAGTGGGTTTCCTGGTTTGTGCTT
ACTGTTGCTGTGATTAAATGCTGACCTTGAGCA

hide sequence

RefSeq Acc Id:

XM_006236433 ⟹ XP_006236495

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	78,716,473 - 78,725,829 (-)	NCBI
mRatBN7.2	4	77,385,752 - 77,394,709 (-)	NCBI
Rnor_6.0	4	78,069,006 - 78,077,962 (-)	NCBI
Rnor_5.0	4	142,732,559 - 142,741,652 (-)	NCBI

Sequence:

show sequence

TGCTGGTCAGACAGTCTCCCGCGGGACCGCGGCGCTACCACATACTCGGCTGCCACTGGCGATT
TTAAAGACAGCCATGTACACACTGCTCTCCTCCCCAAACACGCCCCCTCCTTTCCCTGCTCCCC
CCAACTCTTCACTACTACCACCACCACCCCGTTCCGCGCTCCACCTTTCCCCAGCTCCTCCCTC
CTAGGCTGTGAGCACCCTCCCTTCTAGCCCGAGTGCCCTTCCTCCCTAGCCTCTTCTCCTTCCT
CTCCCCTCTGCCCTTCCTCGGTCCTAAGCTCCCACTTTCCATCTCCACACTCCGGGCATCTTGC
CTGCAGACCGTCACCTGCACTGAAACCCATTAGTGCACCCTCCCGCGACGGGTCTCTCGAAGAC
CCTCCGCCTCAGCCTGGTGCCCCGAAGCACTGTTCCCGCTTTCCGGGTTCCTCCCCCATCACCC
GCAACGCTACCCCGCACCCTCTCCCTCCACATCTTTCCTTCCCCTCCCCGCGAAGTTTCAGGGC
TGTCAGTCCGGGAGTCTTTCGGGCAGCCCGCACCCAAGCTGCAGGCAGCCGGCGCCATTGTGCA
AACGGCCGCCCGGGACCGGAGGCCCGAGCGCCTGGGTCCCCCAAAGCGGGCCGCGGCACGTAGC
CGCAGGAGCCCGCCAGGGTCTGTGGCCTGATCACCTAGGAGAGCCACTCCTGGTGGCCATGAGA
GAGACCCTGGAGGCCCTGAACTCTTTGGGATTCTCAGTGGGACAGCCAGAGATGGCACCCCAAA
GTGAGCCCAGGGATGGGTTCAGTAATCCCCAGGAGAAGATGTCATCTAGAGATGAGAGCACACT
GCACTCATGCTCAGGGCCTGAGACCCCTGGCCAGAAAGAAGGTATCCACACAGAACAAGCTGAA
GCTCCTTGTATGGGCAGCCAGGCCTGTATCCCACAGAAGGCCGAGCCTGCAAGCTCTGTCCCAG
GGGAGGAATGGATGATTCGGAAAGTGAAGGTAGAGGATGAGGACCAGGAGGCAGAGGAGGAGGT
GGAATGGCCCCAGCATCTCTCCTTCCTTCCCAGTCCTTTTCCTACTCCTGACTTGGGTCAGTTG
GCTGTTGCATACAAACTGGAGCCAGGGACTCCGGGGACACTAGGTGGAATCGCGCTGTCCGGGT
GGGCGCCGATCCCTGAAAAGCCTTATGGCTGCGAGGAATGCGAGCGGCGATTCCGGGACCAGCT
AACTCTGCGGCTGCATCAGAGGTTGCACCGGGGTGAGGGTCCTTGTGCCTGCCCGGACTGTGGC
CGCAGCTTCACGCAGCGTGCTCATATGCTTCTGCACCAACGCAGCCACCGCGGAGAGCGTCCCT
TCCCGTGCTCAGAGTGCGATAAGCGTTTCAGCAAGAAAGCCCACCTGACCCGTCACCTGCGCAC
TCACACTGGCGAGCGTCCCTACCCGTGCGCCGAATGCGGCAAACGCTTCAGCCAGAAGATTCAC
CTAGGCTCGCACCAGAAGACCCACACTGGCGAGCGGCCCTTCCCCTGCACGGAATGCGAGAAGC
GTTTCCGCAAGAAGACGCACCTGATCCGCCACCAGCGTATCCACACAGGTGAGAGGCCCTACCA
GTGCACCCAGTGTACACGCAGCTTCACCCACAAGCAACATCTGGTGAGGCACCAGAGGGTGCAC
GATGCTGCTAGCCGCACCCGGTCCTCTCCCGACATTCCTGCTACTCCCCATCCCCCGACCGCGT
CTCTTGCCCCATCCCCTACTGGGCCCAAGCCTTTCGCCTGCTCCCATTGCGGGCAGAGCTTTGG
CTGGAAAAAGAACCTCGCTACGCATCAGAGTCTGCACCTCACCGAGGGTCGTCCTTTTGGGTGC
GATGAATGTGCACTCGGCACCAACGTGGACCCCGCTGCCGAGCCCTCCGCCTGCACTCCCCATG
CGCCTGACTGTGGCCCGGGTTCGGGGCCCGTGGCACCCCAGCGCACGACCTCTAGCGAGCGCTC
CTTCTTCTGCCCCGACTGCGGGCGCGGCTTCGCCCACGGGCAGCACCTGGCCCGGCACCGGCGC
GTGCACACGGGTGAAAGGCCATTTGCCTGTGCTCAGTGTGGCCGCCGCTTCGGCTCACGACCCA
ATCTAGTCGCCCACTCCCGGGCTCACAGCGGCGCCAGACCTTTTGCCTGTGCACAGTGTGGCCG
CCGCTTCAGTCGGAAATCTCACCTGGGCCGCCACCAGGCAGTGCACACTGGCAGCCGCCCCCAC
GCTTGCGCCGTCTGCGCCCGCTGCTTCAGCTCCAAAACCAACCTGGTCCGCCACCAGGCGATCC
ATACGGGCTCCCGTCCCTTTTCCTGCCCTCAGTGCGCCAAGAGCTTCAGCCGCAAGACCCACCT
GGTGCGGCACCAACGCATCCATGGAGAAGCGGCCCTCCCAGCCTCAGCCTCAAACCTCTCTGCT
CCAGCCTGGTCCAATCCCTCCGAGGTGGTACCGCCTCCAATCTTCTTCTAAGCCGAATTCTGAC
CCGCACCCTGCCTTTCCCGACAGATTTGGGAGACTAAGTGGGTTTTCAATATTCACACCTAGGT
TGCTGCCAAAGCACCAGGACACTTGAGTCTTTGTCCTTTCTTGAATGTTAGTTAAGAAGTCCGA
AAAACATACTTAGCTCTTGACAGTTACGACAAAGAACACAGAGAGACTACCCTTGCAGATACCA
CACTGAGAACCAGACATTTCTGGGGATCAACCAGGTCAAGGGGAGACTGACTGAGCAGGAAACC
TCTAAATAGAAGGAAAGAATAGTTATTTATGTACTTGAAGGTCATTAACGTTCAGATCTGAAGT
CCTGGGGCTGTTCACTGAGCCAGGGGAGGAAAGCCTGACTCTTGTACTCACTGCCACCTCCAAC
CACAGGAAAAGACCTTTCCTGTCAGTTCAGGGAAGTAAACCTAGCTAGCTGGTTCTTCCCAACC
AAAGTGTATTATTCACAGATGCCAAACAACTACCATGGTTCCGTGCGCGCTCGTGTGTCTGTGT
CACACAAGTTTGGCTTGGAGGGGGAGGTGAGGACCAAAGGACCAAAGGCTGCTCCCAGGGGCCC
AGCATTATTACTGTAGGTGCTGCAGCTCCATACCACCTGTTTGCAGCCCTTTGAGAGGCTTCCC
AGAAGCATCCTTACGTGCACCTGCCTAGGAGGTAAAGAGGAGGCAGTGCTTGAACAGGCCATTA
AAAGTTGTTTCTATGTTGCCTTTTCGACCAGTTGTCTCCTTGTGAGGAGTGCTGGAGCCTGAAG
ACACTACAACTGTACACCCACCTGGGCTGACAGCAGCAGAGGGGCTGCCTGACGAGAGGGAGCA
GTGGGGGGATGGGGTCTGAGTTTAGAGAGAACTATTTTGGATTCGACCTCTTAGAGAACTTGGA
GGGAAGCCTTTACTCTCCTGGAACTTCAATTTCTCATTAAAACGAGAGCTGGTGTTGATGAAA

hide sequence

RefSeq Acc Id:

XM_006236434 ⟹ XP_006236496

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	78,716,473 - 78,724,779 (-)	NCBI
mRatBN7.2	4	77,385,752 - 77,393,873 (-)	NCBI
Rnor_6.0	4	78,068,822 - 78,077,300 (-)	NCBI
Rnor_5.0	4	142,732,559 - 142,741,652 (-)	NCBI

Sequence:

show sequence

ACACCGAGGCTCCGGAGCAGGCATCTCCGCCCGCCACCCAAACGGAGCTTTACAAGCCCTGCCG
GCTCACGGCAGGTGACAACCCCGAGGGAAGGGGCGCGCAGACGCGAGTGTGGGGGAGGGGCGGG
GGTCAGAAGAGGGAGGGAAGGGAGTCAGGAGGGAGGGTCCAGGCGCAGAGGGGGAGACTAGGAA
ACTGGAGGGGATGGCAAGGACTAGAAGAGGCCCGGTGGGAGCAGGGTCTGTGGCCTGATCACCT
AGGAGAGCCACTCCTGGTGGCCATGAGAGAGACCCTGGAGGCCCTGAACTCTTTGGGATTCTCA
GTGGGACAGCCAGAGATGGCACCCCAAAGTGAGCCCAGGGATGGGTTCAGTAATCCCCAGGAGA
AGATGTCATCTAGAGATGAGAGCACACTGCACTCATGCTCAGGGCCTGAGACCCCTGGCCAGAA
AGAAGGTATCCACACAGAACAAGCTGAAGCTCCTTGTATGGGCAGCCAGGCCTGTATCCCACAG
AAGGCCGAGCCTGCAAGCTCTGTCCCAGGGGAGGAATGGATGATTCGGAAAGTGAAGGTAGAGG
ATGAGGACCAGGAGGCAGAGGAGGAGGTGGAATGGCCCCAGCATCTCTCCTTCCTTCCCAGTCC
TTTTCCTACTCCTGACTTGGGTCAGTTGGCTGTTGCATACAAACTGGAGCCAGGGACTCCGGGG
ACACTAGGTGGAATCGCGCTGTCCGGGTGGGCGCCGATCCCTGAAAAGCCTTATGGCTGCGAGG
AATGCGAGCGGCGATTCCGGGACCAGCTAACTCTGCGGCTGCATCAGAGGTTGCACCGGGGTGA
GGGTCCTTGTGCCTGCCCGGACTGTGGCCGCAGCTTCACGCAGCGTGCTCATATGCTTCTGCAC
CAACGCAGCCACCGCGGAGAGCGTCCCTTCCCGTGCTCAGAGTGCGATAAGCGTTTCAGCAAGA
AAGCCCACCTGACCCGTCACCTGCGCACTCACACTGGCGAGCGTCCCTACCCGTGCGCCGAATG
CGGCAAACGCTTCAGCCAGAAGATTCACCTAGGCTCGCACCAGAAGACCCACACTGGCGAGCGG
CCCTTCCCCTGCACGGAATGCGAGAAGCGTTTCCGCAAGAAGACGCACCTGATCCGCCACCAGC
GTATCCACACAGGTGAGAGGCCCTACCAGTGCACCCAGTGTACACGCAGCTTCACCCACAAGCA
ACATCTGGTGAGGCACCAGAGGGTGCACGATGCTGCTAGCCGCACCCGGTCCTCTCCCGACATT
CCTGCTACTCCCCATCCCCCGACCGCGTCTCTTGCCCCATCCCCTACTGGGCCCAAGCCTTTCG
CCTGCTCCCATTGCGGGCAGAGCTTTGGCTGGAAAAAGAACCTCGCTACGCATCAGAGTCTGCA
CCTCACCGAGGGTCGTCCTTTTGGGTGCGATGAATGTGCACTCGGCACCAACGTGGACCCCGCT
GCCGAGCCCTCCGCCTGCACTCCCCATGCGCCTGACTGTGGCCCGGGTTCGGGGCCCGTGGCAC
CCCAGCGCACGACCTCTAGCGAGCGCTCCTTCTTCTGCCCCGACTGCGGGCGCGGCTTCGCCCA
CGGGCAGCACCTGGCCCGGCACCGGCGCGTGCACACGGGTGAAAGGCCATTTGCCTGTGCTCAG
TGTGGCCGCCGCTTCGGCTCACGACCCAATCTAGTCGCCCACTCCCGGGCTCACAGCGGCGCCA
GACCTTTTGCCTGTGCACAGTGTGGCCGCCGCTTCAGTCGGAAATCTCACCTGGGCCGCCACCA
GGCAGTGCACACTGGCAGCCGCCCCCACGCTTGCGCCGTCTGCGCCCGCTGCTTCAGCTCCAAA
ACCAACCTGGTCCGCCACCAGGCGATCCATACGGGCTCCCGTCCCTTTTCCTGCCCTCAGTGCG
CCAAGAGCTTCAGCCGCAAGACCCACCTGGTGCGGCACCAACGCATCCATGGAGAAGCGGCCCT
CCCAGCCTCAGCCTCAAACCTCTCTGCTCCAGCCTGGTCCAATCCCTCCGAGGTGGTACCGCCT
CCAATCTTCTTCTAAGCCGAATTCTGACCCGCACCCTGCCTTTCCCGACAGATTTGGGAGACTA
AGTGGGTTTTCAATATTCACACCTAGGTTGCTGCCAAAGCACCAGGACACTTGAGTCTTTGTCC
TTTCTTGAATGTTAGTTAAGAAGTCCGAAAAACATACTTAGCTCTTGACAGTTACGACAAAGAA
CACAGAGAGACTACCCTTGCAGATACCACACTGAGAACCAGACATTTCTGGGGATCAACCAGGT
CAAGGGGAGACTGACTGAGCAGGAAACCTCTAAATAGAAGGAAAGAATAGTTATTTATGTACTT
GAAGGTCATTAACGTTCAGATCTGAAGTCCTGGGGCTGTTCACTGAGCCAGGGGAGGAAAGCCT
GACTCTTGTACTCACTGCCACCTCCAACCACAGGAAAAGACCTTTCCTGTCAGTTCAGGGAAGT
AAACCTAGCTAGCTGGTTCTTCCCAACCAAAGTGTATTATTCACAGATGCCAAACAACTACCAT
GGTTCCGTGCGCGCTCGTGTGTCTGTGTCACACAAGTTTGGCTTGGAGGGGGAGGTGAGGACCA
AAGGACCAAAGGCTGCTCCCAGGGGCCCAGCATTATTACTGTAGGTGCTGCAGCTCCATACCAC
CTGTTTGCAGCCCTTTGAGAGGCTTCCCAGAAGCATCCTTACGTGCACCTGCCTAGGAGGTAAA
GAGGAGGCAGTGCTTGAACAGGCCATTAAAAGTTGTTTCTATGTTGCCTTTTCGACCAGTTGTC
TCCTTGTGAGGAGTGCTGGAGCCTGAAGACACTACAACTGTACACCCACCTGGGCTGACAGCAG
CAGAGGGGCTGCCTGACGAGAGGGAGCAGTGGGGGGATGGGGTCTGAGTTTAGAGAGAACTATT
TTGGATTCGACCTCTTAGAGAACTTGGAGGGAAGCCTTTACTCTCCTGGAACTTCAATTTCTCA
TTAAAACGAGAGCTGGTGTTGATGAAAGCGGAGACTCCTTTCTATCCTATTACTAGATTACTAA
CTACAAAAATACCCAAGGCAACCGTCTCCTGGGTGCTAAGCACTGGGAAAGGTCAGGAGCCAGC
TAGCAAGGATCCTTCCATCACAGCTTAAGTGGGTTTCCTGGTTTGTGCTTACTGTTGCTGTGAT
TAAATGCTGACCTTGAGCA

hide sequence

RefSeq Acc Id:

XM_017592790 ⟹ XP_017448279

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	78,716,473 - 78,725,829 (-)	NCBI
mRatBN7.2	4	77,385,752 - 77,394,709 (-)	NCBI
Rnor_6.0	4	78,069,006 - 78,077,962 (-)	NCBI

Sequence:

show sequence

TGCTGGTCAGACAGTCTCCCGCGGGACCGCGGCGCTACCACATACTCGGCTGCCACTGGCGATT
TTAAAGACAGCCATGTACACACTGCTCTCCTCCCCAAACACGCCCCCTCCTTTCCCTGCTCCCC
CCAACTCTTCACTACTACCACCACCACCCCGTTCCGCGCTCCACCTTTCCCCAGCTCCTCCCTC
CTAGGCTGTGAGCACCCTCCCTTCTAGCCCGAGTGCCCTTCCTCCCTAGCCTCTTCTCCTTCCT
CTCCCCTCTGCCCTTCCTCGGTCCTAAGCTCCCACTTTCCATCTCCACACTCCGGGCATCTTGC
CTGCAGACCGTCACCTGCACTGAAACCCATTAGTGCACCCTCCCGCGACGGGTCTCTCGAAGAC
CCTCCGCCTCAGCCTGGTGCCCCGAAGCACTGTTCCCGCTTTCCGGGTTCCTCCCCCATCACCC
GCAACGCTACCCCGCACCCTCTCCCTCCACATCTTTCCTTCCCCTCCCCGCGAAGTTTCAGGGC
TGTCAGTCCGGGAGTCTTTCGGGCAGCCCGCACCCAAGCTGCAGGCAGCCGGCGCCATTGTGCA
AACGGCCGCCCGGGACCGGAGGCCCGAGCGCCTGGGTCCCCCAAAGCGGGCCGCGGCACGTAGC
CGCAGGAGCCCGCCAGGATTCTCAGTGGGACAGCCAGAGATGGCACCCCAAAGTGAGCCCAGGG
ATGGGTTCAGTAATCCCCAGGAGAAGATGTCATCTAGAGATGAGAGCACACTGCACTCATGCTC
AGGGCCTGAGACCCCTGGCCAGAAAGAAGGTATCCACACAGAACAAGCTGAAGCTCCTTGTATG
GGCAGCCAGGCCTGTATCCCACAGAAGGCCGAGCCTGCAAGCTCTGTCCCAGGGGAGGAATGGA
TGATTCGGAAAGTGAAGGTAGAGGATGAGGACCAGGAGGCAGAGGAGGAGGTGGAATGGCCCCA
GCATCTCTCCTTCCTTCCCAGTCCTTTTCCTACTCCTGACTTGGGTCAGTTGGCTGTTGCATAC
AAACTGGAGCCAGGGACTCCGGGGACACTAGGTGGAATCGCGCTGTCCGGGTGGGCGCCGATCC
CTGAAAAGCCTTATGGCTGCGAGGAATGCGAGCGGCGATTCCGGGACCAGCTAACTCTGCGGCT
GCATCAGAGGTTGCACCGGGGTGAGGGTCCTTGTGCCTGCCCGGACTGTGGCCGCAGCTTCACG
CAGCGTGCTCATATGCTTCTGCACCAACGCAGCCACCGCGGAGAGCGTCCCTTCCCGTGCTCAG
AGTGCGATAAGCGTTTCAGCAAGAAAGCCCACCTGACCCGTCACCTGCGCACTCACACTGGCGA
GCGTCCCTACCCGTGCGCCGAATGCGGCAAACGCTTCAGCCAGAAGATTCACCTAGGCTCGCAC
CAGAAGACCCACACTGGCGAGCGGCCCTTCCCCTGCACGGAATGCGAGAAGCGTTTCCGCAAGA
AGACGCACCTGATCCGCCACCAGCGTATCCACACAGGTGAGAGGCCCTACCAGTGCACCCAGTG
TACACGCAGCTTCACCCACAAGCAACATCTGGTGAGGCACCAGAGGGTGCACGATGCTGCTAGC
CGCACCCGGTCCTCTCCCGACATTCCTGCTACTCCCCATCCCCCGACCGCGTCTCTTGCCCCAT
CCCCTACTGGGCCCAAGCCTTTCGCCTGCTCCCATTGCGGGCAGAGCTTTGGCTGGAAAAAGAA
CCTCGCTACGCATCAGAGTCTGCACCTCACCGAGGGTCGTCCTTTTGGGTGCGATGAATGTGCA
CTCGGCACCAACGTGGACCCCGCTGCCGAGCCCTCCGCCTGCACTCCCCATGCGCCTGACTGTG
GCCCGGGTTCGGGGCCCGTGGCACCCCAGCGCACGACCTCTAGCGAGCGCTCCTTCTTCTGCCC
CGACTGCGGGCGCGGCTTCGCCCACGGGCAGCACCTGGCCCGGCACCGGCGCGTGCACACGGGT
GAAAGGCCATTTGCCTGTGCTCAGTGTGGCCGCCGCTTCGGCTCACGACCCAATCTAGTCGCCC
ACTCCCGGGCTCACAGCGGCGCCAGACCTTTTGCCTGTGCACAGTGTGGCCGCCGCTTCAGTCG
GAAATCTCACCTGGGCCGCCACCAGGCAGTGCACACTGGCAGCCGCCCCCACGCTTGCGCCGTC
TGCGCCCGCTGCTTCAGCTCCAAAACCAACCTGGTCCGCCACCAGGCGATCCATACGGGCTCCC
GTCCCTTTTCCTGCCCTCAGTGCGCCAAGAGCTTCAGCCGCAAGACCCACCTGGTGCGGCACCA
ACGCATCCATGGAGAAGCGGCCCTCCCAGCCTCAGCCTCAAACCTCTCTGCTCCAGCCTGGTCC
AATCCCTCCGAGGTGGTACCGCCTCCAATCTTCTTCTAAGCCGAATTCTGACCCGCACCCTGCC
TTTCCCGACAGATTTGGGAGACTAAGTGGGTTTTCAATATTCACACCTAGGTTGCTGCCAAAGC
ACCAGGACACTTGAGTCTTTGTCCTTTCTTGAATGTTAGTTAAGAAGTCCGAAAAACATACTTA
GCTCTTGACAGTTACGACAAAGAACACAGAGAGACTACCCTTGCAGATACCACACTGAGAACCA
GACATTTCTGGGGATCAACCAGGTCAAGGGGAGACTGACTGAGCAGGAAACCTCTAAATAGAAG
GAAAGAATAGTTATTTATGTACTTGAAGGTCATTAACGTTCAGATCTGAAGTCCTGGGGCTGTT
CACTGAGCCAGGGGAGGAAAGCCTGACTCTTGTACTCACTGCCACCTCCAACCACAGGAAAAGA
CCTTTCCTGTCAGTTCAGGGAAGTAAACCTAGCTAGCTGGTTCTTCCCAACCAAAGTGTATTAT
TCACAGATGCCAAACAACTACCATGGTTCCGTGCGCGCTCGTGTGTCTGTGTCACACAAGTTTG
GCTTGGAGGGGGAGGTGAGGACCAAAGGACCAAAGGCTGCTCCCAGGGGCCCAGCATTATTACT
GTAGGTGCTGCAGCTCCATACCACCTGTTTGCAGCCCTTTGAGAGGCTTCCCAGAAGCATCCTT
ACGTGCACCTGCCTAGGAGGTAAAGAGGAGGCAGTGCTTGAACAGGCCATTAAAAGTTGTTTCT
ATGTTGCCTTTTCGACCAGTTGTCTCCTTGTGAGGAGTGCTGGAGCCTGAAGACACTACAACTG
TACACCCACCTGGGCTGACAGCAGCAGAGGGGCTGCCTGACGAGAGGGAGCAGTGGGGGGATGG
GGTCTGAGTTTAGAGAGAACTATTTTGGATTCGACCTCTTAGAGAACTTGGAGGGAAGCCTTTA
CTCTCCTGGAACTTCAATTTCTCATTAAAACGAGAGCTGGTGTTGATGAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001019498	(Get FASTA)	NCBI Sequence Viewer
	XP_006236493	(Get FASTA)	NCBI Sequence Viewer
	XP_006236494	(Get FASTA)	NCBI Sequence Viewer
	XP_006236495	(Get FASTA)	NCBI Sequence Viewer
	XP_006236496	(Get FASTA)	NCBI Sequence Viewer
	XP_017448279	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH86534	(Get FASTA)	NCBI Sequence Viewer
	EDL88269	(Get FASTA)	NCBI Sequence Viewer
	EDL88270	(Get FASTA)	NCBI Sequence Viewer
	EDL88271	(Get FASTA)	NCBI Sequence Viewer
	EDL88272	(Get FASTA)	NCBI Sequence Viewer
	EDL88273	(Get FASTA)	NCBI Sequence Viewer
	EDL88274	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000010377
	ENSRNOP00000010377.4
GenBank Protein	Q5RJR4	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001019498 ⟸ NM_001024327

- UniProtKB:

Q5RJR4 (UniProtKB/Swiss-Prot), A6K0E7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MRETLEALNSLGFSVGQPEMAPQSEPRDGFSNPQEKMSSRDESTLHSCSGPETPGQKEGIHTEQ
AEAPCMGSQACIPQKAEPASSVPGEEWMIRKVKVEDEDQEAEEEVEWPQHLSFLPSPFPTPDLG
QLAVAYKLEPGTPGTLGGIALSGWAPIPEKPYGCEECERRFRDQLTLRLHQRLHRGEGPCACPD
CGRSFTQRAHMLLHQRSHRGERPFPCSECDKRFSKKAHLTRHLRTHTGERPYPCAECGKRFSQK
IHLGSHQKTHTGERPFPCTECEKRFRKKTHLIRHQRIHTGERPYQCTQCTRSFTHKQHLVRHQR
VHDAASRTRSSPDIPATPHPPTASLAPSPTGPKPFACSHCGQSFGWKKNLATHQSLHLTEGRPF
GCDECALGTNVDPAAEPSACTPHAPDCGPGSGPVAPQRTTSSERSFFCPDCGRGFAHGQHLARH
RRVHTGERPFACAQCGRRFGSRPNLVAHSRAHSGARPFACAQCGRRFSRKSHLGRHQAVHTGSR
PHACAVCARCFSSKTNLVRHQAIHTGSRPFSCPQCAKSFSRKTHLVRHQRIHGEAALPASASNL
SAPAWSNPSEVVPPPIFF

hide sequence

RefSeq Acc Id:	XP_006236495 ⟸ XM_006236433
- Peptide Label:	isoform X1
- UniProtKB:	Q5RJR4 (UniProtKB/Swiss-Prot), A6K0E7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRETLEALNSLGFSVGQPEMAPQSEPRDGFSNPQEKMSSRDESTLHSCSGPETPGQKEGIHTEQ AEAPCMGSQACIPQKAEPASSVPGEEWMIRKVKVEDEDQEAEEEVEWPQHLSFLPSPFPTPDLG QLAVAYKLEPGTPGTLGGIALSGWAPIPEKPYGCEECERRFRDQLTLRLHQRLHRGEGPCACPD CGRSFTQRAHMLLHQRSHRGERPFPCSECDKRFSKKAHLTRHLRTHTGERPYPCAECGKRFSQK IHLGSHQKTHTGERPFPCTECEKRFRKKTHLIRHQRIHTGERPYQCTQCTRSFTHKQHLVRHQR VHDAASRTRSSPDIPATPHPPTASLAPSPTGPKPFACSHCGQSFGWKKNLATHQSLHLTEGRPF GCDECALGTNVDPAAEPSACTPHAPDCGPGSGPVAPQRTTSSERSFFCPDCGRGFAHGQHLARH RRVHTGERPFACAQCGRRFGSRPNLVAHSRAHSGARPFACAQCGRRFSRKSHLGRHQAVHTGSR PHACAVCARCFSSKTNLVRHQAIHTGSRPFSCPQCAKSFSRKTHLVRHQRIHGEAALPASASNL SAPAWSNPSEVVPPPIFF hide sequence

RefSeq Acc Id:	XP_006236496 ⟸ XM_006236434
- Peptide Label:	isoform X1
- UniProtKB:	Q5RJR4 (UniProtKB/Swiss-Prot), A6K0E7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRETLEALNSLGFSVGQPEMAPQSEPRDGFSNPQEKMSSRDESTLHSCSGPETPGQKEGIHTEQ AEAPCMGSQACIPQKAEPASSVPGEEWMIRKVKVEDEDQEAEEEVEWPQHLSFLPSPFPTPDLG QLAVAYKLEPGTPGTLGGIALSGWAPIPEKPYGCEECERRFRDQLTLRLHQRLHRGEGPCACPD CGRSFTQRAHMLLHQRSHRGERPFPCSECDKRFSKKAHLTRHLRTHTGERPYPCAECGKRFSQK IHLGSHQKTHTGERPFPCTECEKRFRKKTHLIRHQRIHTGERPYQCTQCTRSFTHKQHLVRHQR VHDAASRTRSSPDIPATPHPPTASLAPSPTGPKPFACSHCGQSFGWKKNLATHQSLHLTEGRPF GCDECALGTNVDPAAEPSACTPHAPDCGPGSGPVAPQRTTSSERSFFCPDCGRGFAHGQHLARH RRVHTGERPFACAQCGRRFGSRPNLVAHSRAHSGARPFACAQCGRRFSRKSHLGRHQAVHTGSR PHACAVCARCFSSKTNLVRHQAIHTGSRPFSCPQCAKSFSRKTHLVRHQRIHGEAALPASASNL SAPAWSNPSEVVPPPIFF hide sequence

RefSeq Acc Id:	XP_006236494 ⟸ XM_006236432
- Peptide Label:	isoform X1
- UniProtKB:	Q5RJR4 (UniProtKB/Swiss-Prot), A6K0E7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRETLEALNSLGFSVGQPEMAPQSEPRDGFSNPQEKMSSRDESTLHSCSGPETPGQKEGIHTEQ AEAPCMGSQACIPQKAEPASSVPGEEWMIRKVKVEDEDQEAEEEVEWPQHLSFLPSPFPTPDLG QLAVAYKLEPGTPGTLGGIALSGWAPIPEKPYGCEECERRFRDQLTLRLHQRLHRGEGPCACPD CGRSFTQRAHMLLHQRSHRGERPFPCSECDKRFSKKAHLTRHLRTHTGERPYPCAECGKRFSQK IHLGSHQKTHTGERPFPCTECEKRFRKKTHLIRHQRIHTGERPYQCTQCTRSFTHKQHLVRHQR VHDAASRTRSSPDIPATPHPPTASLAPSPTGPKPFACSHCGQSFGWKKNLATHQSLHLTEGRPF GCDECALGTNVDPAAEPSACTPHAPDCGPGSGPVAPQRTTSSERSFFCPDCGRGFAHGQHLARH RRVHTGERPFACAQCGRRFGSRPNLVAHSRAHSGARPFACAQCGRRFSRKSHLGRHQAVHTGSR PHACAVCARCFSSKTNLVRHQAIHTGSRPFSCPQCAKSFSRKTHLVRHQRIHGEAALPASASNL SAPAWSNPSEVVPPPIFF hide sequence

RefSeq Acc Id:	XP_006236493 ⟸ XM_006236431
- Peptide Label:	isoform X1
- UniProtKB:	Q5RJR4 (UniProtKB/Swiss-Prot), A6K0E7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRETLEALNSLGFSVGQPEMAPQSEPRDGFSNPQEKMSSRDESTLHSCSGPETPGQKEGIHTEQ AEAPCMGSQACIPQKAEPASSVPGEEWMIRKVKVEDEDQEAEEEVEWPQHLSFLPSPFPTPDLG QLAVAYKLEPGTPGTLGGIALSGWAPIPEKPYGCEECERRFRDQLTLRLHQRLHRGEGPCACPD CGRSFTQRAHMLLHQRSHRGERPFPCSECDKRFSKKAHLTRHLRTHTGERPYPCAECGKRFSQK IHLGSHQKTHTGERPFPCTECEKRFRKKTHLIRHQRIHTGERPYQCTQCTRSFTHKQHLVRHQR VHDAASRTRSSPDIPATPHPPTASLAPSPTGPKPFACSHCGQSFGWKKNLATHQSLHLTEGRPF GCDECALGTNVDPAAEPSACTPHAPDCGPGSGPVAPQRTTSSERSFFCPDCGRGFAHGQHLARH RRVHTGERPFACAQCGRRFGSRPNLVAHSRAHSGARPFACAQCGRRFSRKSHLGRHQAVHTGSR PHACAVCARCFSSKTNLVRHQAIHTGSRPFSCPQCAKSFSRKTHLVRHQRIHGEAALPASASNL SAPAWSNPSEVVPPPIFF hide sequence

RefSeq Acc Id:	XP_017448279 ⟸ XM_017592790
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K5V9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAPQSEPRDGFSNPQEKMSSRDESTLHSCSGPETPGQKEGIHTEQAEAPCMGSQACIPQKAEPA SSVPGEEWMIRKVKVEDEDQEAEEEVEWPQHLSFLPSPFPTPDLGQLAVAYKLEPGTPGTLGGI ALSGWAPIPEKPYGCEECERRFRDQLTLRLHQRLHRGEGPCACPDCGRSFTQRAHMLLHQRSHR GERPFPCSECDKRFSKKAHLTRHLRTHTGERPYPCAECGKRFSQKIHLGSHQKTHTGERPFPCT ECEKRFRKKTHLIRHQRIHTGERPYQCTQCTRSFTHKQHLVRHQRVHDAASRTRSSPDIPATPH PPTASLAPSPTGPKPFACSHCGQSFGWKKNLATHQSLHLTEGRPFGCDECALGTNVDPAAEPSA CTPHAPDCGPGSGPVAPQRTTSSERSFFCPDCGRGFAHGQHLARHRRVHTGERPFACAQCGRRF GSRPNLVAHSRAHSGARPFACAQCGRRFSRKSHLGRHQAVHTGSRPHACAVCARCFSSKTNLVR HQAIHTGSRPFSCPQCAKSFSRKTHLVRHQRIHGEAALPASASNLSAPAWSNPSEVVPPPIFF hide sequence

Ensembl Acc Id:

ENSRNOP00000073578 ⟸ ENSRNOT00000080654

Ensembl Acc Id:

ENSRNOP00000010377 ⟸ ENSRNOT00000010377

Protein Domains

C2H2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5RJR4-F1-model_v2	AlphaFold	Q5RJR4	1-594	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1561603	AgrOrtholog
BioCyc Gene	G2FUF-44962	BioCyc
Ensembl Genes	ENSRNOG00000007707	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000010377	ENTREZGENE
	ENSRNOT00000010377.7	UniProtKB/Swiss-Prot
Gene3D-CATH	Classic Zinc Finger	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7097755	IMAGE-MGC_LOAD
InterPro	Znf_C2H2_sf	UniProtKB/Swiss-Prot
	Znf_C2H2_type	UniProtKB/Swiss-Prot
KEGG Report	rno:500110	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:105814	IMAGE-MGC_LOAD
NCBI Gene	500110	ENTREZGENE
PANTHER	ZINC FINGER PROTEIN	UniProtKB/Swiss-Prot
	ZINC FINGER PROTEIN 771	UniProtKB/Swiss-Prot
Pfam	zf-C2H2	UniProtKB/Swiss-Prot
PhenoGen	Zfp467	PhenoGen
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/Swiss-Prot
	ZINC_FINGER_C2H2_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000007707	RatGTEx
SMART	ZnF_C2H2	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF57667	UniProtKB/Swiss-Prot
UniProt	A0A0G2K5V9	ENTREZGENE
	A6K0E7	ENTREZGENE, UniProtKB/TrEMBL
	Q5RJR4	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-07-19	Zfp467	zinc finger protein 467	Znf467	zinc finger protein 467	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-25	Znf467	zinc finger protein 467	Zfp467	zinc finger protein 467	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-05	Zfp467	zinc finger protein 467	LOC500110	similar to zinc finger protein EZI	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-02-09	LOC500110	similar to zinc finger protein EZI			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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