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Gene: Prrg1 (proline rich and Gla domain 1) Rattus norvegicus

Analyze

Symbol:

Prrg1

Name:

proline rich and Gla domain 1

RGD ID:

1561320

Description:

Predicted to enable serine-type endopeptidase activity. Predicted to be involved in blood coagulation and proteolysis. Predicted to be located in extracellular region and membrane. Predicted to be active in extracellular space. Orthologous to human PRRG1 (proline rich and Gla domain 1); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC363472; proline rich Gla (G-carboxyglutamic acid) 1; RGD1561320; similar to hypothetical protein; transmembrane gamma-carboxyglutamic acid protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PRRG1 (proline rich and Gla domain 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Prrg1 (proline rich Gla (G-carboxyglutamic acid) 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Prrg1 (proline rich and Gla domain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PRRG1 (proline rich and Gla domain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PRRG1 (proline rich and Gla domain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Prrg1 (proline rich and Gla domain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PRRG1 (proline rich and Gla domain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PRRG1 (proline rich and Gla domain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Prrg1 (proline rich and Gla domain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Prrg1 (proline rich and Gla domain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	RTN4IP1 (reticulon 4 interacting protein 1)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	PRRG1 (proline rich and Gla domain 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Prrg1 (proline rich Gla (G-carboxyglutamic acid) 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	prrg1 (proline rich Gla (G-carboxyglutamic acid) 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	prrg1 (proline rich Gla (G-carboxyglutamic acid) 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	prrg1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	prrg1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	46,381,329 - 46,493,677 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	46,383,967 - 46,493,700 (-)	Ensembl				GRCr8
mRatBN7.2	X	42,494,256 - 42,606,612 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	42,494,256 - 42,606,588 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	43,833,736 - 43,943,461 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	47,301,067 - 47,410,801 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	44,965,814 - 45,075,542 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	45,698,240 - 45,806,238 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	45,698,237 - 45,806,198 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	45,920,009 - 46,028,742 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	64,203,026 - 64,316,641 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	X	43,145,061 - 43,253,915 (-)	NCBI		Celera
Cytogenetic Map	X	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

3,4-methylenedioxymethamphetamine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

5-fluorouracil (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

aflatoxin B1 (ISO)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

Butylbenzyl phthalate (ISO)

cadmium dichloride (EXP)

chlordecone (ISO)

cisplatin (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

dexamethasone (ISO)

diarsenic trioxide (ISO)

dioxygen (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP,ISO)

entinostat (ISO)

flutamide (EXP)

folic acid (ISO)

genistein (ISO)

indometacin (ISO)

lead(0) (ISO)

leflunomide (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

mercury dibromide (ISO)

methylmercury chloride (ISO)

nickel sulfate (ISO)

ozone (ISO)

panobinostat (ISO)

paracetamol (EXP)

permethrin (ISO)

phenylmercury acetate (ISO)

potassium chromate (ISO)

resorcinol (ISO)

rotenone (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichostatin A (ISO)

triptonide (ISO)

urethane (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

extracellular region (IEA)

extracellular space (IEA)

Molecular Function

calcium ion binding (IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Prrg1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	46,381,329 - 46,493,677 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	46,383,967 - 46,493,700 (-)	Ensembl				GRCr8
mRatBN7.2	X	42,494,256 - 42,606,612 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	42,494,256 - 42,606,588 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	43,833,736 - 43,943,461 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	47,301,067 - 47,410,801 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	44,965,814 - 45,075,542 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	45,698,240 - 45,806,238 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	45,698,237 - 45,806,198 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	45,920,009 - 46,028,742 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	64,203,026 - 64,316,641 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	X	43,145,061 - 43,253,915 (-)	NCBI		Celera
Cytogenetic Map	X	q21	NCBI

PRRG1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	37,349,364 - 37,457,291 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	37,349,309 - 37,492,702 (+)	Ensembl			hg38	GRCh38
GRCh37	X	37,208,617 - 37,316,544 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	37,130,773 - 37,201,463 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	X	36,964,818 - 37,072,736	NCBI
Celera	X	41,346,185 - 41,454,238 (+)	NCBI		Celera
Cytogenetic Map	X	p21.1	NCBI
HuRef	X	34,955,127 - 35,062,967 (+)	NCBI		HuRef
CHM1_1	X	37,239,598 - 37,347,627 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	36,752,902 - 36,860,846 (+)	NCBI		T2T-CHM13v2.0

Prrg1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	77,493,216 - 77,627,539 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	77,493,219 - 77,627,502 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	X	78,449,610 - 78,583,914 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	78,449,613 - 78,583,896 (-)	Ensembl			mm10	GRCm38
MGSCv37	X	75,694,952 - 75,829,235 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	X	74,704,396 - 74,836,613 (-)	NCBI		MGSCv36	mm8
Celera	X	69,782,814 - 69,916,788 (-)	NCBI		Celera
Cytogenetic Map	X	B	NCBI
cM Map	X	38.34	NCBI

Prrg1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955587	287,845 - 388,557 (-)	Ensembl
ChiLan1.0	NW_004955587	289,906 - 388,534 (-)	NCBI	ChiLan1.0	ChiLan1.0

PRRG1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	39,004,983 - 39,113,114 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	39,008,358 - 39,116,490 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	29,806,505 - 29,914,627 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	37,433,739 - 37,541,340 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	37,433,328 - 37,541,340 (+)	Ensembl			panPan2	panpan1.1

PRRG1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	31,856,586 - 32,141,855 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	31,870,092 - 32,138,147 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	19,344,176 - 19,490,722 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	32,038,867 - 32,185,095 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	32,038,867 - 32,185,087 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	32,122,908 - 32,268,825 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	32,086,788 - 32,232,928 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	32,186,570 - 32,332,759 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Prrg1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	24,348,497 - 24,447,177 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936502	4,189,254 - 4,291,140 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936502	4,189,283 - 4,288,089 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PRRG1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	33,091,149 - 33,232,556 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	X	33,064,499 - 33,232,556 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	36,740,734 - 36,882,357 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PRRG1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Vero_WHO_p1.0	NW_023666056	37,827,100 - 37,931,661 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Prrg1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624762	18,273,434 - 18,378,802 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624762	18,273,401 - 18,379,796 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Prrg1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	18	45,061,099 - 45,111,025 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Prrg1
341 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	306
Count of miRNA genes:	178
Interacting mature miRNAs:	197
Transcripts:	ENSRNOT00000066663
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
731181	Uae27	Urinary albumin excretion QTL 27	2.7	0.0059	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	X	1970440	46970440	Rat
738035	Stresp1	Stress response QTL 1	4.96	0.000011	stress-related behavior trait (VT:0010451)	defensive burying - coping	X	45182909	117740458	Rat
631666	Iddm5	Insulin dependent diabetes mellitus QTL 5			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	X	8111486	53111486	Rat
1598837	Memor13	Memory QTL 13	3.2		exploratory behavior trait (VT:0010471)	difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	X	44930883	89930883	Rat

Markers in Region

AU048072

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Celera	X	43,252,714 - 43,252,754	UniSTS
Cytogenetic Map	X	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	83	59	6	347	183	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001191888	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434274	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434275	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434276	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434277	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602104	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602105	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602106	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280139	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280140	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280141	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280142	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ215939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000066663 ⟹ ENSRNOP00000063292

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	42,494,256 - 42,606,588 (-)	Ensembl
Rnor_6.0 Ensembl	X	45,698,237 - 45,806,198 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100193 ⟹ ENSRNOP00000091704

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	42,494,273 - 42,606,526 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000103255 ⟹ ENSRNOP00000087825

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	42,494,287 - 42,513,723 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000125245 ⟹ ENSRNOP00000108965

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	46,383,967 - 46,493,700 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000129443 ⟹ ENSRNOP00000106134

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	46,383,967 - 46,437,215 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000157302 ⟹ ENSRNOP00000099645

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	46,383,967 - 46,456,509 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000168871 ⟹ ENSRNOP00000107597

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	46,383,967 - 46,493,607 (-)	Ensembl

RefSeq Acc Id:

NM_001191888 ⟹ NP_001178817

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	46,383,958 - 46,493,607 (-)	NCBI
mRatBN7.2	X	42,496,885 - 42,606,546 (-)	NCBI
Rnor_6.0	X	45,700,869 - 45,806,169 (-)	NCBI
Rnor_5.0	X	45,920,009 - 46,028,742 (-)	NCBI
Celera	X	43,145,061 - 43,253,915 (-)	NCBI

Sequence:

show sequence

CTCCTGGCTCGGCAGTTGCGGGAGCGCGCAGGCGCGGCTTGCAGCTCTGCTTGCGAGAAGTAGC
GGAGCAGGGCTAACGAGAATCGTCATTCAAGACCTGTCAGAAGCCACAAGAAAAAAAATGGGAA
GAGAATGCTGGGATCAAAGATGCACTCCATCCACCCTGCTGATTAGATTTAGTTTGACTGAAGA
GAAAGATGCATGTTTTCCTCACGGGAGAAAAAGCAAACTCAGTCCTAAAACGCTACCCAAGAGC
AAATGGGCTTTTTGAAGAAATAAGACAGGGCAACATCGAGCGTGAGTGCAGAGAAGAAGTCTGC
ACATATGAAGAAGCCAGAGAGGCTTTTGAAAATCATGAAAAAACCAAGGAGTTTTGGAGCACCT
ACACAAAAGCACAACAAGGAGAAACCAACAGAGGAAGTGACTGGTTTCAATTTTATCTTACTTT
TCCACTAATCTTTGGCCTCTTCATTATTCTCCTTGTCATTTTCTTAATCTGGAGATGCTTTCTA
AGAAACAAAACTCGGAGACAGACAGTGACTGAAAGCCACATTCCTTTCCCTCAACATCTTAACA
TCATTACTCCACCTCCTCCACCAGATGAAGTCTTTGATAGCAGTGGATTGTCTCCAGGGTTTTT
GGAATATGTTGTTGGGCGCTCAGATTCAGTTTCCACTCGCCTTTCCAACTGTGATCCCCCACCG
ACATACGAGGAAGCCACTGGCCAGGTGAATCTGAGAAGGAGTGAAACAGAACCTCATTTAGACC
CACCACCAGAATATGAGGATATAGTCAACTCCAGTTCAGCCAGTGCCATCGCTATGGTGCCTGT
GGTCACCACCATCAAATGAAGCTGTAAATCTTTTTTTTTTACTTTAATCATTTCTAAAATACTA
ATGGAAAAACTTTCTAGCACTTTAATACTACAGAAATGTGCATTGACTTATTTTATTAGACTCT
TAGAGCATACCACTTCACATTTACTGGTTTGATTTATCTTTGGTTTTGTTTGTTATTATAAAAT
TATTAACTGTGTTTGTTTTTTTACAAGAGGAAACATGAATGAAAGACATATCAGTGGCAGTCTT
TATGTGCCGTAAGGAATACACATGTATGCATATAGCCACATATATACCATCTAATTTATGTACA
ACTAACTTCTACTACACCACCAATAAAAACAGCATTACTCACAAAAATTAAAAAGTCAGGGGGC
ACAAACAGTGTATGTGATAGACAGCAACATGCATGTTTTCTAATTAAAGACATTGGTTAACCTC
CTATTTCTCTTTCATGAAAGGAAAAATATG

hide sequence

RefSeq Acc Id:

XM_006256963 ⟹ XP_006257025

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	46,381,329 - 46,493,673 (-)	NCBI
mRatBN7.2	X	42,494,256 - 42,606,612 (-)	NCBI
Rnor_6.0	X	45,698,240 - 45,806,238 (-)	NCBI
Rnor_5.0	X	45,920,009 - 46,028,742 (-)	NCBI

Sequence:

show sequence

CTGGAGTGGGTCCCACAGCTTCCTAGTGCCCTTTGCTGAGGCGGCAGCTGGCTGTTGGCTCCCC
CTCAGCTCCTGGCTCGGCAGTTGCGGGAGCGCGCAGGCGCGGCTTGCAGCTCTGCTTGCGAGAA
GTAGCGGAGCAGGGCTAACGAGAATCGTCATTCAAGACCTGTCAGAAGCCACAAGAAAAAAAAT
GGGAAGAGAATGCTGGGATCAAAGATGCACTCCATCCACCCTGCTGATTAGATTTAGTTTGACT
GAAGAGAAAGATGCATGATTAAATTATGATGCATGGAATTTACATACCGCGCAAGTAAGACATT
TTCAGAAAAACAAAGTATATAAAAATAAATGCATCTTTTCCCCATAAAAGTTTTCCTCACGGGA
GAAAAAGCAAACTCAGTCCTAAAACGCTACCCAAGAGCAAATGGGCTTTTTGAAGAAATAAGAC
AGGGCAACATCGAGCGTGAGTGCAGAGAAGAAGTCTGCACATATGAAGAAGCCAGAGAGGCTTT
TGAAAATCATGAAAAAACCAAGGAGTTTTGGAGCACCTACACAAAAGCACAACAAGGAGAAACC
AACAGAGGAAGTGACTGGTTTCAATTTTATCTTACTTTTCCACTAATCTTTGGCCTCTTCATTA
TTCTCCTTGTCATTTTCTTAATCTGGAGATGCTTTCTAAGAAACAAAACTCGGAGACAGACAGT
GACTGAAAGCCACATTCCTTTCCCTCAACATCTTAACATCATTACTCCACCTCCTCCACCAGAT
GAAGTCTTTGATAGCAGTGGATTGTCTCCAGGGTTTTTGGAATATGTTGTTGGGCGCTCAGATT
CAGTTTCCACTCGCCTTTCCAACTGTGATCCCCCACCGACATACGAGGAAGCCACTGGCCAGGT
GAATCTGAGAAGGAGTGAAACAGAACCTCATTTAGACCCACCACCAGAATATGAGGATATAGTC
AACTCCAGTTCAGCCAGTGCCATCGCTATGGTGCCTGTGGTCACCACCATCAAATGAAGCTGTA
AATCTTTTTTTTTTACTTTAATCATTTCTAAAATACTAATGGAAAAACTTTCTAGCACTTTAAT
ACTACAGAAATGTGCATTGACTTATTTTATTAGACTCTTAGAGCATACCACTTCACATTTACTG
GTTTGATTTATCTTTGGTTTTGTTTGTTATTATAAAATTATTAACTGTGTTTGTTTTTTTACAA
GAGGAAACATGAATGAAAGACATATCAGTGGCAGTCTTTATGTGCCGTAAGGAATACACATGTA
TGCATATAGCCACATATATACCATCTAATTTATGTACAACTAACTTCTACTACACCACCAATAA
AAACAGCATTACTCACAAAAATTAAAAAGTCAGGGGGCACAAACAGTGTATGTGATAGACAGCA
ACATGCATGTTTTCTAATTAAAGACATTGGTTAACCTCCTATTTCTCTTTCATGAAAGGAAAAA
TATGCATGGATTCATCCTCAATTTTAGAAACATCTCACAGAGAAAGACAGAGACAGAGCATGTA
GCATTTACTATATGTACTTGATTGTAATATATAACAAGGAAATCATTGATCATTAGTGGCATTT
AGCTCATTTTGTACTAGGGTTTTTCTTCTTGGCTGATAACCTAACATTGTCCCATTAAAATTTT
CTTAACATCTTTGGATGTTTTATGCCACTCATATTAATATTTTGCTTGCAAGTATTTCTAGGTA
ATTAAATAATATTTATGTTAATGACAAGGAGTAGGTATTGACTACTCCATTGCTCATTGTGTGG
TTAGCAATAATGTTCTTATACTAATTTTTATTCTCATTGCTACTACAGACTCTCCATTTAGACT
CAAGAATTTAGCCAAAATCAATTTTGAATCATTTTCTTAATGTTTTGCACAGGTTAAAAATCTT
ATTCTCAAAATTGTTAGTACAGAATTTTTCACTTATTTATAAGCTGTGACTTTTGTGTTAAAGT
TCTGTTGATAGGTTACACAGTACCTGCCATAGTAGATGCACATTAAATCTAGTTTAGTTCCACA
TATATCTCATTATGTTGCTGTTTTATATTCTATCCTTTTAGCTGCAGTCGTTTTTGCTTCTTTT
CCTTAGAGGAGAGAGGGAGTAGGTTATGAATGAATTGCCAAAATAAACTATTTCAGAAAGAATA
GAAAAAAGATCAAATGAGATGGCATGTATACAAGTAATTTTTCAGTATGAAGAACTATTTAATT
CTAAGATCCTGATATTATTATTGTGCTTCAGGGTGACATTTCTCCTTGTTTCGCTATAATTGCA
TCAGAGCTTTACATAATGAGAAATAGAACAGGCTGCTCCATGAATAGTTAATATTCTGCTAAGC
TGAATGTATGGGCTATTACTTGTCTTTACACATAATCTGGACTATACAAAAGCTGTGCCTATTT
AAGTATACTTCCCAGTGCTGTATTGGATGAAGTAATGCTGGAATTTACACTAAAGTACATGAAT
TAATAGGTCTGCTAGGTGAAAAGGGTATTTGTATCTTGATAATGGTCTCAGCATGACAATATTG
CTTTAAATATTTTCCCTACTATATAATAATTGTTTCTAATTAAATTTGAGGTTGGAGACATTTG
ATCCAGTGTACAAGACTAGTTATGGATTGATTATCACTGAAAATTAAGGCTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACGAATATTAGGCTTTAGATGAGACCAGCA
ATTTTCAAATTGTAGCCCATAAACCCTAGGAGTTTTCTGACATTCTTCCATGGAATCTGTGAAA
TCAAAATATTTTCATCCTATTTGTTTCTTTATTCAAGTTCTCTCAAAACAGAGTTAAAAAATGG
AAAACAATAGTATTCACACACATCTTTTTACAAAGACAATTTAGCTATTTTTCATAAAAATGTA
ATTTGTATTAGCATATTTTTTTAATTTTTGGCTGAATGACTGCTTTAACTTTTTTCAGTTCATT
TCTAACATGTTAAATATCGATAGACATAATCTCAAAAACAAAAGTTCTTTGGAGTCTAGATTCC
CCCAAGAATTTAAGGAGGGATCTAGAATCCAAAATTTTAAGAACTGTAGGATTGGACAAAATAA
CAAGACATCCTCTCACTACGTTAGGCTTTTGTTCTTATAAAATTGCTTTATATTTTGTAGTCTC
AGTATTGGATTGACCACTTTCTGAAATAGAATAATGAATGATGGTTCTTGAAACAAAAGCTAAA
TAAATTGATCTGTAATGATAGCTGTTTAGATTGTTGGTCAGTAAAAACACTATTTCATAGTAAT
TAATAGCTGCACTAACCATAAATTTCATGGCAGCTTGCTATGATAAGAGTATAATCAAAATATT
ACTTCATGAAATCTTATTTTACACTTTTTGTTGCGTTTGAGTACAGTTTATGTTTCATACTTTT
AAAATCCCCTTTGCTACCCCTTCTGGTTTTATAAACTGAGATTCTCAACATTTATGATATAATT
AAGGGGCTTATCTGGAATAATGTATATTTTTATGCTTTGCCTTTCCTACCTGGTTGATACTGCA
TTTGCCTTTCATCATTTTTAATGAAGATTTATTTTTGCAGAGTATACTTAGTACCTTTCTAAGC
AGTAAGTAAATGGAATTAAACAATTTATATTTCAATAAAATGATCTGCTCAAGGTTCCTGCAGT
ATATTGATTTTCAAACCTCCACCTACATTGTTTCTGTCTGGAATCCTTAAATGGGTACTTTTTG
CTTTCCTGCTCTAAATGTCACAATGAATTATATATGTTTTAAATAAATAAGATAACTGCTTCTT
TTCCTGTTGACTAATAAAAAAGGGAGATGTTATGTTTGTTGATTGCTAATGATAACTTCAAGAT
TGATGATCTGACCCAGTAACTACAGAGGTAGCTTTAACTTCGTTCTGTATTAATAGCGTGTATT
TTATTACAGTACTTCACATTTTCAAATGCTTGATTTACATTAAATTATCATATTTAACTTTTTA
TGTTTATACTAGATACAATTTTCTTATGTTTCTGTGTTTTTGGTATGCTAAATAAAGCTATTTT
TAAACCCAA

hide sequence

RefSeq Acc Id:

XM_006256965 ⟹ XP_006257027

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	46,381,329 - 46,493,677 (-)	NCBI
mRatBN7.2	X	42,494,256 - 42,606,612 (-)	NCBI
Rnor_6.0	X	45,698,240 - 45,806,238 (-)	NCBI
Rnor_5.0	X	45,920,009 - 46,028,742 (-)	NCBI

Sequence:

show sequence

CTGGAGTGGGTCCCACAGCTTCCTAGTGCCCTTTGCTGAGGCGGCAGCTGGCTGTTGGCTCCCC
CTCAGCTCCTGGCTCGGCAGTTGCGGGAGCGCGCAGGCGCGGCTTGCAGCTCTGCTTGCGAGAA
GTAGCGGAGCAGGGCTAACGAGAATCGTCATTCAAGACCTGTCAGAAGCCACAAGAAAAAAAAT
GGGAAGAGTTTTCCTCACGGGAGAAAAAGCAAACTCAGTCCTAAAACGCTACCCAAGAGCAAAT
GGGCTTTTTGAAGAAATAAGACAGGGCAACATCGAGCGTGAGTGCAGAGAAGAAGTCTGCACAT
ATGAAGAAGCCAGAGAGGCTTTTGAAAATCATGAAAAAACCAAGGAGTTTTGGAGCACCTACAC
AAAAGCACAACAAGGAGAAACCAACAGAGGAAGTGACTGGTTTCAATTTTATCTTACTTTTCCA
CTAATCTTTGGCCTCTTCATTATTCTCCTTGTCATTTTCTTAATCTGGAGATGCTTTCTAAGAA
ACAAAACTCGGAGACAGACAGTGACTGAAAGCCACATTCCTTTCCCTCAACATCTTAACATCAT
TACTCCACCTCCTCCACCAGATGAAGTCTTTGATAGCAGTGGATTGTCTCCAGGGTTTTTGGAA
TATGTTGTTGGGCGCTCAGATTCAGTTTCCACTCGCCTTTCCAACTGTGATCCCCCACCGACAT
ACGAGGAAGCCACTGGCCAGGTGAATCTGAGAAGGAGTGAAACAGAACCTCATTTAGACCCACC
ACCAGAATATGAGGATATAGTCAACTCCAGTTCAGCCAGTGCCATCGCTATGGTGCCTGTGGTC
ACCACCATCAAATGAAGCTGTAAATCTTTTTTTTTTACTTTAATCATTTCTAAAATACTAATGG
AAAAACTTTCTAGCACTTTAATACTACAGAAATGTGCATTGACTTATTTTATTAGACTCTTAGA
GCATACCACTTCACATTTACTGGTTTGATTTATCTTTGGTTTTGTTTGTTATTATAAAATTATT
AACTGTGTTTGTTTTTTTACAAGAGGAAACATGAATGAAAGACATATCAGTGGCAGTCTTTATG
TGCCGTAAGGAATACACATGTATGCATATAGCCACATATATACCATCTAATTTATGTACAACTA
ACTTCTACTACACCACCAATAAAAACAGCATTACTCACAAAAATTAAAAAGTCAGGGGGCACAA
ACAGTGTATGTGATAGACAGCAACATGCATGTTTTCTAATTAAAGACATTGGTTAACCTCCTAT
TTCTCTTTCATGAAAGGAAAAATATGCATGGATTCATCCTCAATTTTAGAAACATCTCACAGAG
AAAGACAGAGACAGAGCATGTAGCATTTACTATATGTACTTGATTGTAATATATAACAAGGAAA
TCATTGATCATTAGTGGCATTTAGCTCATTTTGTACTAGGGTTTTTCTTCTTGGCTGATAACCT
AACATTGTCCCATTAAAATTTTCTTAACATCTTTGGATGTTTTATGCCACTCATATTAATATTT
TGCTTGCAAGTATTTCTAGGTAATTAAATAATATTTATGTTAATGACAAGGAGTAGGTATTGAC
TACTCCATTGCTCATTGTGTGGTTAGCAATAATGTTCTTATACTAATTTTTATTCTCATTGCTA
CTACAGACTCTCCATTTAGACTCAAGAATTTAGCCAAAATCAATTTTGAATCATTTTCTTAATG
TTTTGCACAGGTTAAAAATCTTATTCTCAAAATTGTTAGTACAGAATTTTTCACTTATTTATAA
GCTGTGACTTTTGTGTTAAAGTTCTGTTGATAGGTTACACAGTACCTGCCATAGTAGATGCACA
TTAAATCTAGTTTAGTTCCACATATATCTCATTATGTTGCTGTTTTATATTCTATCCTTTTAGC
TGCAGTCGTTTTTGCTTCTTTTCCTTAGAGGAGAGAGGGAGTAGGTTATGAATGAATTGCCAAA
ATAAACTATTTCAGAAAGAATAGAAAAAAGATCAAATGAGATGGCATGTATACAAGTAATTTTT
CAGTATGAAGAACTATTTAATTCTAAGATCCTGATATTATTATTGTGCTTCAGGGTGACATTTC
TCCTTGTTTCGCTATAATTGCATCAGAGCTTTACATAATGAGAAATAGAACAGGCTGCTCCATG
AATAGTTAATATTCTGCTAAGCTGAATGTATGGGCTATTACTTGTCTTTACACATAATCTGGAC
TATACAAAAGCTGTGCCTATTTAAGTATACTTCCCAGTGCTGTATTGGATGAAGTAATGCTGGA
ATTTACACTAAAGTACATGAATTAATAGGTCTGCTAGGTGAAAAGGGTATTTGTATCTTGATAA
TGGTCTCAGCATGACAATATTGCTTTAAATATTTTCCCTACTATATAATAATTGTTTCTAATTA
AATTTGAGGTTGGAGACATTTGATCCAGTGTACAAGACTAGTTATGGATTGATTATCACTGAAA
ATTAAGGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACGAATAT
TAGGCTTTAGATGAGACCAGCAATTTTCAAATTGTAGCCCATAAACCCTAGGAGTTTTCTGACA
TTCTTCCATGGAATCTGTGAAATCAAAATATTTTCATCCTATTTGTTTCTTTATTCAAGTTCTC
TCAAAACAGAGTTAAAAAATGGAAAACAATAGTATTCACACACATCTTTTTACAAAGACAATTT
AGCTATTTTTCATAAAAATGTAATTTGTATTAGCATATTTTTTTAATTTTTGGCTGAATGACTG
CTTTAACTTTTTTCAGTTCATTTCTAACATGTTAAATATCGATAGACATAATCTCAAAAACAAA
AGTTCTTTGGAGTCTAGATTCCCCCAAGAATTTAAGGAGGGATCTAGAATCCAAAATTTTAAGA
ACTGTAGGATTGGACAAAATAACAAGACATCCTCTCACTACGTTAGGCTTTTGTTCTTATAAAA
TTGCTTTATATTTTGTAGTCTCAGTATTGGATTGACCACTTTCTGAAATAGAATAATGAATGAT
GGTTCTTGAAACAAAAGCTAAATAAATTGATCTGTAATGATAGCTGTTTAGATTGTTGGTCAGT
AAAAACACTATTTCATAGTAATTAATAGCTGCACTAACCATAAATTTCATGGCAGCTTGCTATG
ATAAGAGTATAATCAAAATATTACTTCATGAAATCTTATTTTACACTTTTTGTTGCGTTTGAGT
ACAGTTTATGTTTCATACTTTTAAAATCCCCTTTGCTACCCCTTCTGGTTTTATAAACTGAGAT
TCTCAACATTTATGATATAATTAAGGGGCTTATCTGGAATAATGTATATTTTTATGCTTTGCCT
TTCCTACCTGGTTGATACTGCATTTGCCTTTCATCATTTTTAATGAAGATTTATTTTTGCAGAG
TATACTTAGTACCTTTCTAAGCAGTAAGTAAATGGAATTAAACAATTTATATTTCAATAAAATG
ATCTGCTCAAGGTTCCTGCAGTATATTGATTTTCAAACCTCCACCTACATTGTTTCTGTCTGGA
ATCCTTAAATGGGTACTTTTTGCTTTCCTGCTCTAAATGTCACAATGAATTATATATGTTTTAA
ATAAATAAGATAACTGCTTCTTTTCCTGTTGACTAATAAAAAAGGGAGATGTTATGTTTGTTGA
TTGCTAATGATAACTTCAAGATTGATGATCTGACCCAGTAACTACAGAGGTAGCTTTAACTTCG
TTCTGTATTAATAGCGTGTATTTTATTACAGTACTTCACATTTTCAAATGCTTGATTTACATTA
AATTATCATATTTAACTTTTTATGTTTATACTAGATACAATTTTCTTATGTTTCTGTGTTTTTG
GTATGCTAAATAAAGCTATTTTTAAACCCAA

hide sequence

RefSeq Acc Id:

XM_017602104 ⟹ XP_017457593

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	46,381,329 - 46,493,479 (-)	NCBI
mRatBN7.2	X	42,494,256 - 42,606,461 (-)	NCBI
Rnor_6.0	X	45,698,240 - 45,806,084 (-)	NCBI

Sequence:

show sequence

GTGGTAGCCCTGCGGGATTCCTCAAAGAGAACGTGGTTGCAACCGGAAAGGGACTCGGGTGTGT
ATGGAAGACTTTGATCCTGTTAGGGGAAACTCGTGCAGCTGTTTCAGTGGAGGGGCTGCCCGAG
TTTGCCAGGCTCCAGTCGCATGGGGAGAGGAGTGAGCGGTGGCAGGAGACTTCAAGAGAATCGT
CATTCAAGACCTGTCAGAAGCCACAAGAAAAAAAATGGGAAGAGAATGCTGGGATCAAAGATGC
ACTCCATCCACCCTGCTGATTAGATTTAGTTTGACTGAAGAGAAAGATGCATGATTAAATTATG
ATGCATGGAATTTACATACCGCGCAAGTAAGACATTTTCAGAAAAACAAAGTATATAAAAATAA
ATGCATCTTTTCCCCATAAAAGTTTTCCTCACGGGAGAAAAAGCAAACTCAGTCCTAAAACGCT
ACCCAAGAGCAAATGGGCTTTTTGAAGAAATAAGACAGGGCAACATCGAGCGTGAGTGCAGAGA
AGAAGTCTGCACATATGAAGAAGCCAGAGAGGCTTTTGAAAATCATGAAAAAACCAAGGAGTTT
TGGAGCACCTACACAAAAGCACAACAAGGAGAAACCAACAGAGGAAGTGACTGGTTTCAATTTT
ATCTTACTTTTCCACTAATCTTTGGCCTCTTCATTATTCTCCTTGTCATTTTCTTAATCTGGAG
ATGCTTTCTAAGAAACAAAACTCGGAGACAGACAGTGACTGAAAGCCACATTCCTTTCCCTCAA
CATCTTAACATCATTACTCCACCTCCTCCACCAGATGAAGTCTTTGATAGCAGTGGATTGTCTC
CAGGGTTTTTGGAATATGTTGTTGGGCGCTCAGATTCAGTTTCCACTCGCCTTTCCAACTGTGA
TCCCCCACCGACATACGAGGAAGCCACTGGCCAGGTGAATCTGAGAAGGAGTGAAACAGAACCT
CATTTAGACCCACCACCAGAATATGAGGATATAGTCAACTCCAGTTCAGCCAGTGCCATCGCTA
TGGTGCCTGTGGTCACCACCATCAAATGAAGCTGTAAATCTTTTTTTTTTACTTTAATCATTTC
TAAAATACTAATGGAAAAACTTTCTAGCACTTTAATACTACAGAAATGTGCATTGACTTATTTT
ATTAGACTCTTAGAGCATACCACTTCACATTTACTGGTTTGATTTATCTTTGGTTTTGTTTGTT
ATTATAAAATTATTAACTGTGTTTGTTTTTTTACAAGAGGAAACATGAATGAAAGACATATCAG
TGGCAGTCTTTATGTGCCGTAAGGAATACACATGTATGCATATAGCCACATATATACCATCTAA
TTTATGTACAACTAACTTCTACTACACCACCAATAAAAACAGCATTACTCACAAAAATTAAAAA
GTCAGGGGGCACAAACAGTGTATGTGATAGACAGCAACATGCATGTTTTCTAATTAAAGACATT
GGTTAACCTCCTATTTCTCTTTCATGAAAGGAAAAATATGCATGGATTCATCCTCAATTTTAGA
AACATCTCACAGAGAAAGACAGAGACAGAGCATGTAGCATTTACTATATGTACTTGATTGTAAT
ATATAACAAGGAAATCATTGATCATTAGTGGCATTTAGCTCATTTTGTACTAGGGTTTTTCTTC
TTGGCTGATAACCTAACATTGTCCCATTAAAATTTTCTTAACATCTTTGGATGTTTTATGCCAC
TCATATTAATATTTTGCTTGCAAGTATTTCTAGGTAATTAAATAATATTTATGTTAATGACAAG
GAGTAGGTATTGACTACTCCATTGCTCATTGTGTGGTTAGCAATAATGTTCTTATACTAATTTT
TATTCTCATTGCTACTACAGACTCTCCATTTAGACTCAAGAATTTAGCCAAAATCAATTTTGAA
TCATTTTCTTAATGTTTTGCACAGGTTAAAAATCTTATTCTCAAAATTGTTAGTACAGAATTTT
TCACTTATTTATAAGCTGTGACTTTTGTGTTAAAGTTCTGTTGATAGGTTACACAGTACCTGCC
ATAGTAGATGCACATTAAATCTAGTTTAGTTCCACATATATCTCATTATGTTGCTGTTTTATAT
TCTATCCTTTTAGCTGCAGTCGTTTTTGCTTCTTTTCCTTAGAGGAGAGAGGGAGTAGGTTATG
AATGAATTGCCAAAATAAACTATTTCAGAAAGAATAGAAAAAAGATCAAATGAGATGGCATGTA
TACAAGTAATTTTTCAGTATGAAGAACTATTTAATTCTAAGATCCTGATATTATTATTGTGCTT
CAGGGTGACATTTCTCCTTGTTTCGCTATAATTGCATCAGAGCTTTACATAATGAGAAATAGAA
CAGGCTGCTCCATGAATAGTTAATATTCTGCTAAGCTGAATGTATGGGCTATTACTTGTCTTTA
CACATAATCTGGACTATACAAAAGCTGTGCCTATTTAAGTATACTTCCCAGTGCTGTATTGGAT
GAAGTAATGCTGGAATTTACACTAAAGTACATGAATTAATAGGTCTGCTAGGTGAAAAGGGTAT
TTGTATCTTGATAATGGTCTCAGCATGACAATATTGCTTTAAATATTTTCCCTACTATATAATA
ATTGTTTCTAATTAAATTTGAGGTTGGAGACATTTGATCCAGTGTACAAGACTAGTTATGGATT
GATTATCACTGAAAATTAAGGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTTACGAATATTAGGCTTTAGATGAGACCAGCAATTTTCAAATTGTAGCCCATAAACCCTA
GGAGTTTTCTGACATTCTTCCATGGAATCTGTGAAATCAAAATATTTTCATCCTATTTGTTTCT
TTATTCAAGTTCTCTCAAAACAGAGTTAAAAAATGGAAAACAATAGTATTCACACACATCTTTT
TACAAAGACAATTTAGCTATTTTTCATAAAAATGTAATTTGTATTAGCATATTTTTTTAATTTT
TGGCTGAATGACTGCTTTAACTTTTTTCAGTTCATTTCTAACATGTTAAATATCGATAGACATA
ATCTCAAAAACAAAAGTTCTTTGGAGTCTAGATTCCCCCAAGAATTTAAGGAGGGATCTAGAAT
CCAAAATTTTAAGAACTGTAGGATTGGACAAAATAACAAGACATCCTCTCACTACGTTAGGCTT
TTGTTCTTATAAAATTGCTTTATATTTTGTAGTCTCAGTATTGGATTGACCACTTTCTGAAATA
GAATAATGAATGATGGTTCTTGAAACAAAAGCTAAATAAATTGATCTGTAATGATAGCTGTTTA
GATTGTTGGTCAGTAAAAACACTATTTCATAGTAATTAATAGCTGCACTAACCATAAATTTCAT
GGCAGCTTGCTATGATAAGAGTATAATCAAAATATTACTTCATGAAATCTTATTTTACACTTTT
TGTTGCGTTTGAGTACAGTTTATGTTTCATACTTTTAAAATCCCCTTTGCTACCCCTTCTGGTT
TTATAAACTGAGATTCTCAACATTTATGATATAATTAAGGGGCTTATCTGGAATAATGTATATT
TTTATGCTTTGCCTTTCCTACCTGGTTGATACTGCATTTGCCTTTCATCATTTTTAATGAAGAT
TTATTTTTGCAGAGTATACTTAGTACCTTTCTAAGCAGTAAGTAAATGGAATTAAACAATTTAT
ATTTCAATAAAATGATCTGCTCAAGGTTCCTGCAGTATATTGATTTTCAAACCTCCACCTACAT
TGTTTCTGTCTGGAATCCTTAAATGGGTACTTTTTGCTTTCCTGCTCTAAATGTCACAATGAAT
TATATATGTTTTAAATAAATAAGATAACTGCTTCTTTTCCTGTTGACTAATAAAAAAGGGAGAT
GTTATGTTTGTTGATTGCTAATGATAACTTCAAGATTGATGATCTGACCCAGTAACTACAGAGG
TAGCTTTAACTTCGTTCTGTATTAATAGCGTGTATTTTATTACAGTACTTCACATTTTCAAATG
CTTGATTTACATTAAATTATCATATTTAACTTTTTATGTTTATACTAGATACAATTTTCTTATG
TTTCTGTGTTTTTGGTATGCTAAATAAAGCTATTTTTAAACCCAA

hide sequence

RefSeq Acc Id:

XM_017602106 ⟹ XP_017457595

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	46,381,329 - 46,493,561 (-)	NCBI
mRatBN7.2	X	42,494,256 - 42,606,461 (-)	NCBI
Rnor_6.0	X	45,698,240 - 45,806,084 (-)	NCBI

Sequence:

show sequence

GTGGTAGCCCTGCGGGATTCCTCAAAGAGAACGTGGTTGCAACCGGAAAGGGACTCGGGTGTGT
ATGGAAGACTTTGATCCTGTTAGGGGAAACTCGTGCAGCTGTTTCAGTGGAGGGGCTGCCCGAG
TTTGCCAGGCTCCAGTCGCATGGGGAGAGGAGTGAGCGGTGGCAGGAGACTTCAAGAGAATCGT
CATTCAAGACCTGTCAGAAGCCACAAGAAAAAAAATGGGAAGAGTTTTCCTCACGGGAGAAAAA
GCAAACTCAGTCCTAAAACGCTACCCAAGAGCAAATGGGCTTTTTGAAGAAATAAGACAGGGCA
ACATCGAGCGTGAGTGCAGAGAAGAAGTCTGCACATATGAAGAAGCCAGAGAGGCTTTTGAAAA
TCATGAAAAAACCAAGGAGTTTTGGAGCACCTACACAAAAGCACAACAAGGAGAAACCAACAGA
GGAAGTGACTGGTTTCAATTTTATCTTACTTTTCCACTAATCTTTGGCCTCTTCATTATTCTCC
TTGTCATTTTCTTAATCTGGAGATGCTTTCTAAGAAACAAAACTCGGAGACAGACAGTGACTGA
AAGCCACATTCCTTTCCCTCAACATCTTAACATCATTACTCCACCTCCTCCACCAGATGAAGTC
TTTGATAGCAGTGGATTGTCTCCAGGGTTTTTGGAATATGTTGTTGGGCGCTCAGATTCAGTTT
CCACTCGCCTTTCCAACTGTGATCCCCCACCGACATACGAGGAAGCCACTGGCCAGGTGAATCT
GAGAAGGAGTGAAACAGAACCTCATTTAGACCCACCACCAGAATATGAGGATATAGTCAACTCC
AGTTCAGCCAGTGCCATCGCTATGGTGCCTGTGGTCACCACCATCAAATGAAGCTGTAAATCTT
TTTTTTTTACTTTAATCATTTCTAAAATACTAATGGAAAAACTTTCTAGCACTTTAATACTACA
GAAATGTGCATTGACTTATTTTATTAGACTCTTAGAGCATACCACTTCACATTTACTGGTTTGA
TTTATCTTTGGTTTTGTTTGTTATTATAAAATTATTAACTGTGTTTGTTTTTTTACAAGAGGAA
ACATGAATGAAAGACATATCAGTGGCAGTCTTTATGTGCCGTAAGGAATACACATGTATGCATA
TAGCCACATATATACCATCTAATTTATGTACAACTAACTTCTACTACACCACCAATAAAAACAG
CATTACTCACAAAAATTAAAAAGTCAGGGGGCACAAACAGTGTATGTGATAGACAGCAACATGC
ATGTTTTCTAATTAAAGACATTGGTTAACCTCCTATTTCTCTTTCATGAAAGGAAAAATATGCA
TGGATTCATCCTCAATTTTAGAAACATCTCACAGAGAAAGACAGAGACAGAGCATGTAGCATTT
ACTATATGTACTTGATTGTAATATATAACAAGGAAATCATTGATCATTAGTGGCATTTAGCTCA
TTTTGTACTAGGGTTTTTCTTCTTGGCTGATAACCTAACATTGTCCCATTAAAATTTTCTTAAC
ATCTTTGGATGTTTTATGCCACTCATATTAATATTTTGCTTGCAAGTATTTCTAGGTAATTAAA
TAATATTTATGTTAATGACAAGGAGTAGGTATTGACTACTCCATTGCTCATTGTGTGGTTAGCA
ATAATGTTCTTATACTAATTTTTATTCTCATTGCTACTACAGACTCTCCATTTAGACTCAAGAA
TTTAGCCAAAATCAATTTTGAATCATTTTCTTAATGTTTTGCACAGGTTAAAAATCTTATTCTC
AAAATTGTTAGTACAGAATTTTTCACTTATTTATAAGCTGTGACTTTTGTGTTAAAGTTCTGTT
GATAGGTTACACAGTACCTGCCATAGTAGATGCACATTAAATCTAGTTTAGTTCCACATATATC
TCATTATGTTGCTGTTTTATATTCTATCCTTTTAGCTGCAGTCGTTTTTGCTTCTTTTCCTTAG
AGGAGAGAGGGAGTAGGTTATGAATGAATTGCCAAAATAAACTATTTCAGAAAGAATAGAAAAA
AGATCAAATGAGATGGCATGTATACAAGTAATTTTTCAGTATGAAGAACTATTTAATTCTAAGA
TCCTGATATTATTATTGTGCTTCAGGGTGACATTTCTCCTTGTTTCGCTATAATTGCATCAGAG
CTTTACATAATGAGAAATAGAACAGGCTGCTCCATGAATAGTTAATATTCTGCTAAGCTGAATG
TATGGGCTATTACTTGTCTTTACACATAATCTGGACTATACAAAAGCTGTGCCTATTTAAGTAT
ACTTCCCAGTGCTGTATTGGATGAAGTAATGCTGGAATTTACACTAAAGTACATGAATTAATAG
GTCTGCTAGGTGAAAAGGGTATTTGTATCTTGATAATGGTCTCAGCATGACAATATTGCTTTAA
ATATTTTCCCTACTATATAATAATTGTTTCTAATTAAATTTGAGGTTGGAGACATTTGATCCAG
TGTACAAGACTAGTTATGGATTGATTATCACTGAAAATTAAGGCTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTTACGAATATTAGGCTTTAGATGAGACCAGCAATTTTC
AAATTGTAGCCCATAAACCCTAGGAGTTTTCTGACATTCTTCCATGGAATCTGTGAAATCAAAA
TATTTTCATCCTATTTGTTTCTTTATTCAAGTTCTCTCAAAACAGAGTTAAAAAATGGAAAACA
ATAGTATTCACACACATCTTTTTACAAAGACAATTTAGCTATTTTTCATAAAAATGTAATTTGT
ATTAGCATATTTTTTTAATTTTTGGCTGAATGACTGCTTTAACTTTTTTCAGTTCATTTCTAAC
ATGTTAAATATCGATAGACATAATCTCAAAAACAAAAGTTCTTTGGAGTCTAGATTCCCCCAAG
AATTTAAGGAGGGATCTAGAATCCAAAATTTTAAGAACTGTAGGATTGGACAAAATAACAAGAC
ATCCTCTCACTACGTTAGGCTTTTGTTCTTATAAAATTGCTTTATATTTTGTAGTCTCAGTATT
GGATTGACCACTTTCTGAAATAGAATAATGAATGATGGTTCTTGAAACAAAAGCTAAATAAATT
GATCTGTAATGATAGCTGTTTAGATTGTTGGTCAGTAAAAACACTATTTCATAGTAATTAATAG
CTGCACTAACCATAAATTTCATGGCAGCTTGCTATGATAAGAGTATAATCAAAATATTACTTCA
TGAAATCTTATTTTACACTTTTTGTTGCGTTTGAGTACAGTTTATGTTTCATACTTTTAAAATC
CCCTTTGCTACCCCTTCTGGTTTTATAAACTGAGATTCTCAACATTTATGATATAATTAAGGGG
CTTATCTGGAATAATGTATATTTTTATGCTTTGCCTTTCCTACCTGGTTGATACTGCATTTGCC
TTTCATCATTTTTAATGAAGATTTATTTTTGCAGAGTATACTTAGTACCTTTCTAAGCAGTAAG
TAAATGGAATTAAACAATTTATATTTCAATAAAATGATCTGCTCAAGGTTCCTGCAGTATATTG
ATTTTCAAACCTCCACCTACATTGTTTCTGTCTGGAATCCTTAAATGGGTACTTTTTGCTTTCC
TGCTCTAAATGTCACAATGAATTATATATGTTTTAAATAAATAAGATAACTGCTTCTTTTCCTG
TTGACTAATAAAAAAGGGAGATGTTATGTTTGTTGATTGCTAATGATAACTTCAAGATTGATGA
TCTGACCCAGTAACTACAGAGGTAGCTTTAACTTCGTTCTGTATTAATAGCGTGTATTTTATTA
CAGTACTTCACATTTTCAAATGCTTGATTTACATTAAATTATCATATTTAACTTTTTATGTTTA
TACTAGATACAATTTTCTTATGTTTCTGTGTTTTTGGTATGCTAAATAAAGCTATTTTTAAACC
CAA

hide sequence

RefSeq Acc Id:

XM_017602107 ⟹ XP_017457596

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	46,381,329 - 46,493,596 (-)	NCBI
mRatBN7.2	X	42,494,256 - 42,606,596 (-)	NCBI
Rnor_6.0	X	45,698,240 - 45,806,093 (-)	NCBI

Sequence:

show sequence

ACGGTAAGTGTGGTAGCCCTGCGGGATTCCTCAAAGAGAACGTGGTTGCAACCGGAAAGGGACT
CGGAGAATCGTCATTCAAGACCTGTCAGAAGCCACAAGAAAAAAAATGGGAAGAGTTTTCCTCA
CGGGAGAAAAAGCAAACTCAGTCCTAAAACGCTACCCAAGAGCAAATGGGCTTTTTGAAGAAAT
AAGACAGGGCAACATCGAGCGTGAGTGCAGAGAAGAAGTCTGCACATATGAAGAAGCCAGAGAG
GCTTTTGAAAATCATGAAAAAACCAAGGAGTTTTGGAGCACCTACACAAAAGCACAACAAGGAG
AAACCAACAGAGGAAGTGACTGGTTTCAATTTTATCTTACTTTTCCACTAATCTTTGGCCTCTT
CATTATTCTCCTTGTCATTTTCTTAATCTGGAGATGCTTTCTAAGAAACAAAACTCGGAGACAG
ACAGTGACTGAAAGCCACATTCCTTTCCCTCAACATCTTAACATCATTACTCCACCTCCTCCAC
CAGATGAAGTCTTTGATAGCAGTGGATTGTCTCCAGGGTTTTTGGAATATGTTGTTGGGCGCTC
AGATTCAGTTTCCACTCGCCTTTCCAACTGTGATCCCCCACCGACATACGAGGAAGCCACTGGC
CAGGTGAATCTGAGAAGGAGTGAAACAGAACCTCATTTAGACCCACCACCAGAATATGAGGATA
TAGTCAACTCCAGTTCAGCCAGTGCCATCGCTATGGTGCCTGTGGTCACCACCATCAAATGAAG
CTGTAAATCTTTTTTTTTTACTTTAATCATTTCTAAAATACTAATGGAAAAACTTTCTAGCACT
TTAATACTACAGAAATGTGCATTGACTTATTTTATTAGACTCTTAGAGCATACCACTTCACATT
TACTGGTTTGATTTATCTTTGGTTTTGTTTGTTATTATAAAATTATTAACTGTGTTTGTTTTTT
TACAAGAGGAAACATGAATGAAAGACATATCAGTGGCAGTCTTTATGTGCCGTAAGGAATACAC
ATGTATGCATATAGCCACATATATACCATCTAATTTATGTACAACTAACTTCTACTACACCACC
AATAAAAACAGCATTACTCACAAAAATTAAAAAGTCAGGGGGCACAAACAGTGTATGTGATAGA
CAGCAACATGCATGTTTTCTAATTAAAGACATTGGTTAACCTCCTATTTCTCTTTCATGAAAGG
AAAAATATGCATGGATTCATCCTCAATTTTAGAAACATCTCACAGAGAAAGACAGAGACAGAGC
ATGTAGCATTTACTATATGTACTTGATTGTAATATATAACAAGGAAATCATTGATCATTAGTGG
CATTTAGCTCATTTTGTACTAGGGTTTTTCTTCTTGGCTGATAACCTAACATTGTCCCATTAAA
ATTTTCTTAACATCTTTGGATGTTTTATGCCACTCATATTAATATTTTGCTTGCAAGTATTTCT
AGGTAATTAAATAATATTTATGTTAATGACAAGGAGTAGGTATTGACTACTCCATTGCTCATTG
TGTGGTTAGCAATAATGTTCTTATACTAATTTTTATTCTCATTGCTACTACAGACTCTCCATTT
AGACTCAAGAATTTAGCCAAAATCAATTTTGAATCATTTTCTTAATGTTTTGCACAGGTTAAAA
ATCTTATTCTCAAAATTGTTAGTACAGAATTTTTCACTTATTTATAAGCTGTGACTTTTGTGTT
AAAGTTCTGTTGATAGGTTACACAGTACCTGCCATAGTAGATGCACATTAAATCTAGTTTAGTT
CCACATATATCTCATTATGTTGCTGTTTTATATTCTATCCTTTTAGCTGCAGTCGTTTTTGCTT
CTTTTCCTTAGAGGAGAGAGGGAGTAGGTTATGAATGAATTGCCAAAATAAACTATTTCAGAAA
GAATAGAAAAAAGATCAAATGAGATGGCATGTATACAAGTAATTTTTCAGTATGAAGAACTATT
TAATTCTAAGATCCTGATATTATTATTGTGCTTCAGGGTGACATTTCTCCTTGTTTCGCTATAA
TTGCATCAGAGCTTTACATAATGAGAAATAGAACAGGCTGCTCCATGAATAGTTAATATTCTGC
TAAGCTGAATGTATGGGCTATTACTTGTCTTTACACATAATCTGGACTATACAAAAGCTGTGCC
TATTTAAGTATACTTCCCAGTGCTGTATTGGATGAAGTAATGCTGGAATTTACACTAAAGTACA
TGAATTAATAGGTCTGCTAGGTGAAAAGGGTATTTGTATCTTGATAATGGTCTCAGCATGACAA
TATTGCTTTAAATATTTTCCCTACTATATAATAATTGTTTCTAATTAAATTTGAGGTTGGAGAC
ATTTGATCCAGTGTACAAGACTAGTTATGGATTGATTATCACTGAAAATTAAGGCTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACGAATATTAGGCTTTAGATGAGAC
CAGCAATTTTCAAATTGTAGCCCATAAACCCTAGGAGTTTTCTGACATTCTTCCATGGAATCTG
TGAAATCAAAATATTTTCATCCTATTTGTTTCTTTATTCAAGTTCTCTCAAAACAGAGTTAAAA
AATGGAAAACAATAGTATTCACACACATCTTTTTACAAAGACAATTTAGCTATTTTTCATAAAA
ATGTAATTTGTATTAGCATATTTTTTTAATTTTTGGCTGAATGACTGCTTTAACTTTTTTCAGT
TCATTTCTAACATGTTAAATATCGATAGACATAATCTCAAAAACAAAAGTTCTTTGGAGTCTAG
ATTCCCCCAAGAATTTAAGGAGGGATCTAGAATCCAAAATTTTAAGAACTGTAGGATTGGACAA
AATAACAAGACATCCTCTCACTACGTTAGGCTTTTGTTCTTATAAAATTGCTTTATATTTTGTA
GTCTCAGTATTGGATTGACCACTTTCTGAAATAGAATAATGAATGATGGTTCTTGAAACAAAAG
CTAAATAAATTGATCTGTAATGATAGCTGTTTAGATTGTTGGTCAGTAAAAACACTATTTCATA
GTAATTAATAGCTGCACTAACCATAAATTTCATGGCAGCTTGCTATGATAAGAGTATAATCAAA
ATATTACTTCATGAAATCTTATTTTACACTTTTTGTTGCGTTTGAGTACAGTTTATGTTTCATA
CTTTTAAAATCCCCTTTGCTACCCCTTCTGGTTTTATAAACTGAGATTCTCAACATTTATGATA
TAATTAAGGGGCTTATCTGGAATAATGTATATTTTTATGCTTTGCCTTTCCTACCTGGTTGATA
CTGCATTTGCCTTTCATCATTTTTAATGAAGATTTATTTTTGCAGAGTATACTTAGTACCTTTC
TAAGCAGTAAGTAAATGGAATTAAACAATTTATATTTCAATAAAATGATCTGCTCAAGGTTCCT
GCAGTATATTGATTTTCAAACCTCCACCTACATTGTTTCTGTCTGGAATCCTTAAATGGGTACT
TTTTGCTTTCCTGCTCTAAATGTCACAATGAATTATATATGTTTTAAATAAATAAGATAACTGC
TTCTTTTCCTGTTGACTAATAAAAAAGGGAGATGTTATGTTTGTTGATTGCTAATGATAACTTC
AAGATTGATGATCTGACCCAGTAACTACAGAGGTAGCTTTAACTTCGTTCTGTATTAATAGCGT
GTATTTTATTACAGTACTTCACATTTTCAAATGCTTGATTTACATTAAATTATCATATTTAACT
TTTTATGTTTATACTAGATACAATTTTCTTATGTTTCTGTGTTTTTGGTATGCTAAATAAAGCT
ATTTTTAAACCCAA

hide sequence

RefSeq Acc Id:

XM_063280139 ⟹ XP_063136209

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	46,381,329 - 46,493,479 (-)	NCBI

RefSeq Acc Id:

XM_063280140 ⟹ XP_063136210

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	46,381,329 - 46,493,483 (-)	NCBI

RefSeq Acc Id:

XM_063280141 ⟹ XP_063136211

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	46,381,329 - 46,493,479 (-)	NCBI

RefSeq Acc Id:

XM_063280142 ⟹ XP_063136212

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	46,384,765 - 46,493,673 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001178817	(Get FASTA)	NCBI Sequence Viewer
	NP_001421203	(Get FASTA)	NCBI Sequence Viewer
	NP_001421204	(Get FASTA)	NCBI Sequence Viewer
	NP_001421205	(Get FASTA)	NCBI Sequence Viewer
	NP_001421206	(Get FASTA)	NCBI Sequence Viewer
	XP_006257025	(Get FASTA)	NCBI Sequence Viewer
	XP_006257027	(Get FASTA)	NCBI Sequence Viewer
	XP_017457593	(Get FASTA)	NCBI Sequence Viewer
	XP_017457595	(Get FASTA)	NCBI Sequence Viewer
	XP_017457596	(Get FASTA)	NCBI Sequence Viewer
	XP_063136209	(Get FASTA)	NCBI Sequence Viewer
	XP_063136210	(Get FASTA)	NCBI Sequence Viewer
	XP_063136211	(Get FASTA)	NCBI Sequence Viewer
	XP_063136212	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL96070	(Get FASTA)	NCBI Sequence Viewer
	EDL96071	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000099645
	ENSRNOP00000099645.1
	ENSRNOP00000106134
	ENSRNOP00000106134.1
	ENSRNOP00000107597
	ENSRNOP00000107597.1
	ENSRNOP00000108965
	ENSRNOP00000108965.1

RefSeq Acc Id:

NP_001178817 ⟸ NM_001191888

- UniProtKB:

A0A8I6A9I3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MHVFLTGEKANSVLKRYPRANGLFEEIRQGNIERECREEVCTYEEAREAFENHEKTKEFWSTYT
KAQQGETNRGSDWFQFYLTFPLIFGLFIILLVIFLIWRCFLRNKTRRQTVTESHIPFPQHLNII
TPPPPPDEVFDSSGLSPGFLEYVVGRSDSVSTRLSNCDPPPTYEEATGQVNLRRSETEPHLDPP
PEYEDIVNSSSASAIAMVPVVTTIK

hide sequence

RefSeq Acc Id:

XP_006257027 ⟸ XM_006256965

- Peptide Label:

isoform X2

- Sequence:

show sequence

MGRVFLTGEKANSVLKRYPRANGLFEEIRQGNIERECREEVCTYEEAREAFENHEKTKEFWSTY
TKAQQGETNRGSDWFQFYLTFPLIFGLFIILLVIFLIWRCFLRNKTRRQTVTESHIPFPQHLNI
ITPPPPPDEVFDSSGLSPGFLEYVVGRSDSVSTRLSNCDPPPTYEEATGQVNLRRSETEPHLDP
PPEYEDIVNSSSASAIAMVPVVTTIK

hide sequence

RefSeq Acc Id:

XP_006257025 ⟸ XM_006256963

- Peptide Label:

isoform X1

- Sequence:

show sequence

MHLFPIKVFLTGEKANSVLKRYPRANGLFEEIRQGNIERECREEVCTYEEAREAFENHEKTKEF
WSTYTKAQQGETNRGSDWFQFYLTFPLIFGLFIILLVIFLIWRCFLRNKTRRQTVTESHIPFPQ
HLNIITPPPPPDEVFDSSGLSPGFLEYVVGRSDSVSTRLSNCDPPPTYEEATGQVNLRRSETEP
HLDPPPEYEDIVNSSSASAIAMVPVVTTIK

hide sequence

RefSeq Acc Id:

XP_017457596 ⟸ XM_017602107

- Peptide Label:

isoform X2

- Sequence:

show sequence

MGRVFLTGEKANSVLKRYPRANGLFEEIRQGNIERECREEVCTYEEAREAFENHEKTKEFWSTY
TKAQQGETNRGSDWFQFYLTFPLIFGLFIILLVIFLIWRCFLRNKTRRQTVTESHIPFPQHLNI
ITPPPPPDEVFDSSGLSPGFLEYVVGRSDSVSTRLSNCDPPPTYEEATGQVNLRRSETEPHLDP
PPEYEDIVNSSSASAIAMVPVVTTIK

hide sequence

RefSeq Acc Id:

XP_017457595 ⟸ XM_017602106

- Peptide Label:

isoform X2

- Sequence:

show sequence

MGRVFLTGEKANSVLKRYPRANGLFEEIRQGNIERECREEVCTYEEAREAFENHEKTKEFWSTY
TKAQQGETNRGSDWFQFYLTFPLIFGLFIILLVIFLIWRCFLRNKTRRQTVTESHIPFPQHLNI
ITPPPPPDEVFDSSGLSPGFLEYVVGRSDSVSTRLSNCDPPPTYEEATGQVNLRRSETEPHLDP
PPEYEDIVNSSSASAIAMVPVVTTIK

hide sequence

RefSeq Acc Id:	XP_017457593 ⟸ XM_017602104
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUF5 (UniProtKB/TrEMBL), A0A8I6A9I3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHLFPIKVFLTGEKANSVLKRYPRANGLFEEIRQGNIERECREEVCTYEEAREAFENHEKTKEF WSTYTKAQQGETNRGSDWFQFYLTFPLIFGLFIILLVIFLIWRCFLRNKTRRQTVTESHIPFPQ HLNIITPPPPPDEVFDSSGLSPGFLEYVVGRSDSVSTRLSNCDPPPTYEEATGQVNLRRSETEP HLDPPPEYEDIVNSSSASAIAMVPVVTTIK hide sequence

Ensembl Acc Id:

ENSRNOP00000063292 ⟸ ENSRNOT00000066663

Ensembl Acc Id:

ENSRNOP00000087825 ⟸ ENSRNOT00000103255

Ensembl Acc Id:

ENSRNOP00000091704 ⟸ ENSRNOT00000100193

RefSeq Acc Id:	XP_063136210 ⟸ XM_063280140
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A9I3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063136209 ⟸ XM_063280139
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUF5 (UniProtKB/TrEMBL), A0A8I6A9I3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063136211 ⟸ XM_063280141
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A9I3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063136212 ⟸ XM_063280142
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSRNOP00000099645 ⟸ ENSRNOT00000157302

Ensembl Acc Id:

ENSRNOP00000107597 ⟸ ENSRNOT00000168871

Ensembl Acc Id:

ENSRNOP00000108965 ⟸ ENSRNOT00000125245

Ensembl Acc Id:

ENSRNOP00000106134 ⟸ ENSRNOT00000129443

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZUF5-F1-model_v2	AlphaFold	D3ZUF5	1-217	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13701825

Promoter ID:

EPDNEW_R12349

Type:

multiple initiation site

Name:

Prrg1_1

Description:

proline rich and Gla domain 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	X	45,806,214 - 45,806,274	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1561320	AgrOrtholog
BioCyc Gene	G2FUF-2392	BioCyc
Ensembl Genes	ENSRNOG00000026044	Ensembl
	ENSRNOG00000089620	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000125245	ENTREZGENE
	ENSRNOT00000125245.1	UniProtKB/TrEMBL
	ENSRNOT00000129443	ENTREZGENE
	ENSRNOT00000129443.1	UniProtKB/TrEMBL
	ENSRNOT00000157302	ENTREZGENE
	ENSRNOT00000157302.1	UniProtKB/TrEMBL
	ENSRNOT00000168871	ENTREZGENE
	ENSRNOT00000168871.1	UniProtKB/TrEMBL
NCBI Gene	363472	ENTREZGENE
PhenoGen	Prrg1	PhenoGen
RatGTEx	ENSRNOG00000026044	RatGTEx
	ENSRNOG00000089620	RatGTEx
UniProt	A0A8I6A9I3	ENTREZGENE
	A0A8I6ACL3	ENTREZGENE
	A0ABK0L7G1_RAT	UniProtKB/TrEMBL
	A0ABK0LAJ1_RAT	UniProtKB/TrEMBL
	A0ABK0LKJ0_RAT	UniProtKB/TrEMBL
	A0ABK0LU90_RAT	UniProtKB/TrEMBL
	D3ZUF5	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-05-04	Prrg1	proline rich and Gla domain 1	Prrg1	proline rich Gla (G-carboxyglutamic acid) 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-02-29	Prrg1	proline rich Gla (G-carboxyglutamic acid) 1	RGD1561320_predicted	similar to hypothetical protein (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1561320_predicted	similar to hypothetical protein (predicted)	LOC363472	similar to hypothetical protein	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC363472	similar to hypothetical protein			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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