Tmem219 (transmembrane protein 219) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Pathways
Gene: Tmem219 (transmembrane protein 219) Rattus norvegicus
Analyze
Symbol: Tmem219
Name: transmembrane protein 219
RGD ID: 1560566
Description: Predicted to be located in membrane. Orthologous to human TMEM219 (transmembrane protein 219); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: hypothetical LOC308986; insulin-like growth factor-binding protein 3 receptor; LOC308986; RGD1560566
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81190,926,722 - 190,965,044 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1190,926,722 - 190,958,912 (-)EnsemblGRCr8
mRatBN7.21181,496,195 - 181,509,259 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1181,496,192 - 181,534,472 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1189,847,559 - 189,860,637 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01197,033,634 - 197,046,712 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01189,700,853 - 189,713,873 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01198,322,276 - 198,360,552 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1198,324,857 - 198,354,466 (-)Ensemblrn6Rnor6.0
Rnor_5.01205,302,456 - 205,340,935 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41186,065,623 - 186,098,145 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1179,151,515 - 179,183,308 (-)NCBICelera
Cytogenetic Map1q36-q37NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)
receptor complex  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932  


Genomics

Comparative Map Data
Tmem219
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81190,926,722 - 190,965,044 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1190,926,722 - 190,958,912 (-)EnsemblGRCr8
mRatBN7.21181,496,195 - 181,509,259 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1181,496,192 - 181,534,472 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1189,847,559 - 189,860,637 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01197,033,634 - 197,046,712 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01189,700,853 - 189,713,873 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01198,322,276 - 198,360,552 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1198,324,857 - 198,354,466 (-)Ensemblrn6Rnor6.0
Rnor_5.01205,302,456 - 205,340,935 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41186,065,623 - 186,098,145 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1179,151,515 - 179,183,308 (-)NCBICelera
Cytogenetic Map1q36-q37NCBI
TMEM219
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381629,962,079 - 29,973,048 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1629,940,885 - 29,973,052 (+)Ensemblhg38GRCh38
GRCh371629,973,400 - 29,984,369 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361629,880,852 - 29,891,874 (+)NCBIBuild 36Build 36hg18NCBI36
Celera1672,811,353 - 72,823,536 (-)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1627,634,359 - 27,645,383 (+)NCBIHuRef
CHM1_11631,189,140 - 31,200,162 (+)NCBICHM1_1
T2T-CHM13v2.01630,244,712 - 30,255,683 (+)NCBIT2T-CHM13v2.0
Tmem219
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397126,485,391 - 126,527,993 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7126,485,343 - 126,522,089 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm387126,886,219 - 126,928,821 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7126,886,171 - 126,922,917 (-)Ensemblmm10GRCm38
MGSCv377134,029,733 - 134,041,792 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv367126,677,305 - 126,689,420 (-)NCBIMGSCv36mm8
Celera7126,734,357 - 126,746,405 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.25NCBI
Tmem219
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554936,987,621 - 6,999,219 (-)Ensembl
ChiLan1.0NW_0049554936,987,621 - 6,999,219 (-)NCBIChiLan1.0ChiLan1.0
TMEM219
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21830,711,770 - 30,722,813 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11635,503,102 - 35,514,156 (-)NCBINHGRI_mPanPan1
PanPan1.11630,327,890 - 30,346,422 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1630,327,890 - 30,346,316 (+)EnsemblpanPan2panpan1.1
TMEM219
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1617,959,490 - 18,014,813 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl618,000,138 - 18,029,185 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha619,536,269 - 19,587,005 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0618,093,218 - 18,143,963 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
UMICH_Zoey_3.1617,892,636 - 17,943,378 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0617,808,301 - 17,858,554 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0618,123,641 - 18,174,359 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Tmem219
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344124,397,969 - 124,439,954 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650112,495,825 - 12,511,768 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493650112,495,827 - 12,510,942 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM219
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl318,167,923 - 18,176,563 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1318,166,771 - 18,177,834 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
TMEM219
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1526,689,192 - 26,721,969 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660682,833,909 - 2,844,292 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem219
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1274,997,697 - 75,010,004 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Tmem219
185 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:303
Count of miRNA genes:183
Interacting mature miRNAs:212
Transcripts:ENSRNOT00000027094
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1160111531262090437Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1160573753266453731Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1186658830266453731Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1153679879198679879Rat
1354653Despr9Despair related QTL 90.00019locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1177339686222339686Rat
1578770Stresp23Stress response QTL 23kidney sympathetic nerve activity (VT:0004050)stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)1132760429191848948Rat
2293673Bss27Bone structure and strength QTL 2718.630.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)1181059071226059071Rat
61326Eae6Experimental allergic encephalomyelitis QTL 65.3body mass (VT:0001259)change in body weight (CMO:0002045)1182383862191260518Rat
2293677Bss41Bone structure and strength QTL 419.380.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1181059071226059071Rat
70160Bw18Body weight QTL 185.7body mass (VT:0001259)body weight (CMO:0000012)1153679879205813246Rat
1549830Bss1Bone structure and strength QTL 14.8femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)1182039247227039247Rat
70163Bw20Body weight QTL 205.1body mass (VT:0001259)body weight (CMO:0000012)1183564652228564652Rat
8694166Bw147Body weight QTL 1476.830.001body mass (VT:0001259)body weight gain (CMO:0000420)1153788989198788989Rat
1354624Cm35Cardiac mass QTL355.7heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1186658830266453731Rat
1600397Edcs4Endometrial carcinoma susceptibility QTL 42.2uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)1176288899270518180Rat
1354636Lmblg1Limb length QTL 16.4tibia length (VT:0004357)tibia length (CMO:0000450)1160573753210707719Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1162548015270518180Rat
2293689Bss47Bone structure and strength QTL 477.250.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)1181059071226059071Rat
152025235Bw194Body weight QTL 1944.86body mass (VT:0001259)1132966869252856240Rat
1598853Memor3Memory QTL 34.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)1152919152268496042Rat
61341Bp26Blood pressure QTL 26arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1139442053223964440Rat
1354634Kidm12Kidney mass QTL 123.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)1160573753210707719Rat
4889428Stresp24Stress response QTL 240.05heart pumping trait (VT:2000009)absolute change in electrocardiographic low frequency R-R spectral component to high frequency R-R spectral component ratio (CMO:0002162)1165278545210278545Rat
2293693Bss22Bone structure and strength QTL 2233.520.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1181059071226059071Rat
1578759Uae30Urinary albumin excretion QTL 303.30.003urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1160111531262090437Rat
61343Bp28Blood pressure QTL 28arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1161077990206077990Rat
152025232Bw192Body weight QTL 1923.93body mass (VT:0001259)1127329268206393015Rat
2300161Bmd43Bone mineral density QTL 438.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1181059071226059071Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)199645382221502378Rat
61347Bp197Blood pressure QTL 1974.2arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)1168063662213063662Rat
61348Bp30Blood pressure QTL 302.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1159894717207261263Rat
2303622Vencon6Ventilatory control QTL 60.001respiration trait (VT:0001943)respiration rate (CMO:0000289)1163992710208992710Rat
8655649Arrd1Age-related retinal degeneration QTL 14.89retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1109493780193400781Rat
631214Bw61Body weight QTL613.40.0001intramuscular adipose amount (VT:0010044)intramuscular fat area (CMO:0001162)1182535316227535316Rat
7771612Cm80Cardiac mass QTL 808.4heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)1146080545243492863Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1103779152223964440Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)198879955208479939Rat
2300174Bmd42Bone mineral density QTL 428.40.0001lumbar vertebra mineral mass (VT:0010511)bone mineral density (CMO:0001226)1181059071226059071Rat
1300158Bp173Blood pressure QTL 1733.48arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)1155359438194575574Rat
737828Hcas3Hepatocarcinoma susceptibility QTL 34.9liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)1153679879232414077Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1160573753266453731Rat
1358886Bp260Blood pressure QTL 2603.67arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1160574007235238518Rat
1331751Bp199Blood pressure QTL 1993.60022arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1116099376191260518Rat
2293654Bss30Bone structure and strength QTL 3032.650.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1181059071226059071Rat
724531Uae5Urinary albumin excretion QTL 54urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)1160111426262090599Rat
2300187Bmd41Bone mineral density QTL 418.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1181059071226059071Rat
1641895Bp298Blood pressure QTL 298arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1132760429191848948Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1162753891207753891Rat
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1154961463266453731Rat
1358294Bw37Body weight QTL 3750.000011body mass (VT:0001259)body weight (CMO:0000012)1180739993225739993Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)151941022208479811Rat
2312420Pur17Proteinuria QTL 177.10.0001urine protein amount (VT:0005160)urine total protein excretion rate (CMO:0000756)1172718770228180370Rat
10059600Bp378Blood pressure QTL 3783.080.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1186298393231298393Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1111949780210707719Rat
2312558Glom17Glomerulus QTL 173.90.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)1175967553200707874Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134565911208798288Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)193903998191260518Rat
619614Bp78Blood pressure QTL 780.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1178547286206690557Rat
634321Hc1Hypercalciuria QTL 12.91urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1188241285250779312Rat
724562Rends1Renal damage susceptibility QTL 10.05kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)1139442053223964440Rat
2292222Bp307Blood pressure QTL 3073.060.0014arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1186298393231298393Rat
2292220Bp306Blood pressure QTL 3063.470.00087arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1186298393231298393Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1111949780210707719Rat
1600380Niddm70Non-insulin dependent diabetes mellitus QTL 703.10.0008blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1185979875230979875Rat
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1160573753266453731Rat
1354620Kidm19Kidney mass QTL 194kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1160573753210707719Rat
1576310Schws2Schwannoma susceptibility QTL 20.029nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)1153788989198788989Rat
1354618Kidm15Kidney mass QTL 155kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)1165707719210707719Rat
6903303Scl34Serum cholesterol QTL 342.50.0033blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)1173363824227535316Rat
631544Bp84Blood pressure QTL 845.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1132760429191190115Rat
152025212Bw190Body weight QTL 1905.7body mass (VT:0001259)1132966869206393015Rat
1358189Cstrr1Cold stress response QTL 10.0001catecholamine amount (VT:0010543)urine norepinephrine level (CMO:0001629)1132760429191848948Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1111949780228180370Rat
738032Hcas5Hepatocarcinoma susceptibility QTL 53.12liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1185857683270518180Rat
2325727Pia41Pristane induced arthritis QTL 41joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1188241285233241285Rat
2325725Eae31Experimental allergic encephalomyelitis QTL 31nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)1188241285197807511Rat
1354602Bw35Body weight QTL 3512.2body mass (VT:0001259)body weight (CMO:0000012)1160573753210707719Rat
7411599Foco11Food consumption QTL 1118.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)1153788989198788989Rat
631670Iddm10Insulin dependent diabetes mellitus QTL 101.9blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1183564652205813246Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001400628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001400629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001400630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001400631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008774658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008774659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008774660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC166576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000027094   ⟹   ENSRNOP00000027094
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1190,929,303 - 190,958,912 (-)Ensembl
mRatBN7.2 Ensembl1181,506,145 - 181,528,372 (-)Ensembl
Rnor_6.0 Ensembl1198,324,857 - 198,354,466 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000101870   ⟹   ENSRNOP00000094366
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1190,926,722 - 190,939,785 (-)Ensembl
mRatBN7.2 Ensembl1181,496,192 - 181,534,472 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000106056   ⟹   ENSRNOP00000091662
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1190,926,722 - 190,939,176 (-)Ensembl
mRatBN7.2 Ensembl1181,496,192 - 181,508,568 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000166668   ⟹   ENSRNOP00000103953
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1190,926,723 - 190,938,320 (-)Ensembl
RefSeq Acc Id: NM_001400628   ⟹   NP_001387557
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,926,722 - 190,939,176 (-)NCBI
mRatBN7.21181,496,195 - 181,508,650 (-)NCBI
RefSeq Acc Id: NM_001400629   ⟹   NP_001387558
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,926,722 - 190,939,176 (-)NCBI
mRatBN7.21181,496,195 - 181,508,650 (-)NCBI
RefSeq Acc Id: NM_001400630   ⟹   NP_001387559
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,926,722 - 190,939,785 (-)NCBI
mRatBN7.21181,496,195 - 181,509,259 (-)NCBI
RefSeq Acc Id: NM_001400631   ⟹   NP_001387560
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,926,722 - 190,939,785 (-)NCBI
mRatBN7.21181,496,195 - 181,509,259 (-)NCBI
RefSeq Acc Id: XM_063263261   ⟹   XP_063119331
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,926,722 - 190,944,818 (-)NCBI
RefSeq Acc Id: XM_063263263   ⟹   XP_063119333
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,926,722 - 190,944,814 (-)NCBI
RefSeq Acc Id: XM_063263265   ⟹   XP_063119335
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,926,722 - 190,965,023 (-)NCBI
RefSeq Acc Id: XM_063263271   ⟹   XP_063119341
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,926,722 - 190,965,026 (-)NCBI
RefSeq Acc Id: XM_063263273   ⟹   XP_063119343
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,926,722 - 190,964,989 (-)NCBI
RefSeq Acc Id: XM_063263279   ⟹   XP_063119349
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,926,722 - 190,961,079 (-)NCBI
RefSeq Acc Id: XM_063263289   ⟹   XP_063119359
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,926,722 - 190,954,321 (-)NCBI
RefSeq Acc Id: XM_063263297   ⟹   XP_063119367
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,926,722 - 190,965,028 (-)NCBI
RefSeq Acc Id: XM_063263304   ⟹   XP_063119374
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,926,722 - 190,965,042 (-)NCBI
RefSeq Acc Id: XM_063263306   ⟹   XP_063119376
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,926,722 - 190,965,044 (-)NCBI
RefSeq Acc Id: XM_063263309   ⟹   XP_063119379
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,932,220 - 190,944,999 (-)NCBI
RefSeq Acc Id: XM_063263312   ⟹   XP_063119382
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,932,715 - 190,944,916 (-)NCBI
RefSeq Acc Id: XM_063263315   ⟹   XP_063119385
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81190,932,715 - 190,965,007 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001387557 (Get FASTA)   NCBI Sequence Viewer  
  NP_001387558 (Get FASTA)   NCBI Sequence Viewer  
  NP_001387559 (Get FASTA)   NCBI Sequence Viewer  
  NP_001387560 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119331 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119333 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119335 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119341 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119343 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119349 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119359 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119367 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119374 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119376 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119379 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119382 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119385 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI66576 (Get FASTA)   NCBI Sequence Viewer  
  EDM17341 (Get FASTA)   NCBI Sequence Viewer  
  EDM17342 (Get FASTA)   NCBI Sequence Viewer  
  EDM17343 (Get FASTA)   NCBI Sequence Viewer  
  EDM17344 (Get FASTA)   NCBI Sequence Viewer  
  EDM17345 (Get FASTA)   NCBI Sequence Viewer  
  EDM17346 (Get FASTA)   NCBI Sequence Viewer  
  EDM17347 (Get FASTA)   NCBI Sequence Viewer  
  EDM17348 (Get FASTA)   NCBI Sequence Viewer  
  EDM17349 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000027094
  ENSRNOP00000027094.7
  ENSRNOP00000091662
  ENSRNOP00000091662.2
  ENSRNOP00000094366
  ENSRNOP00000094366.1
  ENSRNOP00000103953.1
Ensembl Acc Id: ENSRNOP00000027094   ⟸   ENSRNOT00000027094
Ensembl Acc Id: ENSRNOP00000091662   ⟸   ENSRNOT00000106056
Ensembl Acc Id: ENSRNOP00000094366   ⟸   ENSRNOT00000101870
RefSeq Acc Id: NP_001387560   ⟸   NM_001400631
- Peptide Label: isoform 4 precursor
- UniProtKB: A6I9I4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001387559   ⟸   NM_001400630
- Peptide Label: isoform 3
- UniProtKB: A0A8I6AHK8 (UniProtKB/TrEMBL),   A6I9I3 (UniProtKB/TrEMBL),   A0A8I6AG17 (UniProtKB/TrEMBL),   A6I9I5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001387558   ⟸   NM_001400629
- Peptide Label: isoform 2
- UniProtKB: A0A8I6AG17 (UniProtKB/TrEMBL),   A6I9I5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001387557   ⟸   NM_001400628
- Peptide Label: isoform 1
- UniProtKB: A0A8I6AG17 (UniProtKB/TrEMBL),   A6I9I5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119376   ⟸   XM_063263306
- Peptide Label: isoform X4
- UniProtKB: A6I9I4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119374   ⟸   XM_063263304
- Peptide Label: isoform X4
- UniProtKB: A6I9I4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119367   ⟸   XM_063263297
- Peptide Label: isoform X4
- UniProtKB: A6I9I4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119341   ⟸   XM_063263271
- Peptide Label: isoform X3
- UniProtKB: A0A8I6AHK8 (UniProtKB/TrEMBL),   A6I9I3 (UniProtKB/TrEMBL),   A0A8I6AG17 (UniProtKB/TrEMBL),   A6I9I5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119335   ⟸   XM_063263265
- Peptide Label: isoform X3
- UniProtKB: A0A8I6AHK8 (UniProtKB/TrEMBL),   A6I9I3 (UniProtKB/TrEMBL),   A0A8I6AG17 (UniProtKB/TrEMBL),   A6I9I5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119343   ⟸   XM_063263273
- Peptide Label: isoform X3
- UniProtKB: A0A8I6AHK8 (UniProtKB/TrEMBL),   A6I9I3 (UniProtKB/TrEMBL),   A0A8I6AG17 (UniProtKB/TrEMBL),   A6I9I5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119349   ⟸   XM_063263279
- Peptide Label: isoform X3
- UniProtKB: A0A8I6AHK8 (UniProtKB/TrEMBL),   A6I9I3 (UniProtKB/TrEMBL),   A0A8I6AG17 (UniProtKB/TrEMBL),   A6I9I5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119359   ⟸   XM_063263289
- Peptide Label: isoform X3
- UniProtKB: A0A8I6AHK8 (UniProtKB/TrEMBL),   A6I9I3 (UniProtKB/TrEMBL),   A0A8I6AG17 (UniProtKB/TrEMBL),   A6I9I5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119331   ⟸   XM_063263261
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AG17 (UniProtKB/TrEMBL),   A6I9I5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119333   ⟸   XM_063263263
- Peptide Label: isoform X2
- UniProtKB: A0A8I6AG17 (UniProtKB/TrEMBL),   A6I9I5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119379   ⟸   XM_063263309
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063119385   ⟸   XM_063263315
- Peptide Label: isoform X7
- UniProtKB: B2GV90 (UniProtKB/TrEMBL),   D3ZPT4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119382   ⟸   XM_063263312
- Peptide Label: isoform X6
Ensembl Acc Id: ENSRNOP00000103953   ⟸   ENSRNOT00000166668
Protein Domains
TMEM248/TMEM219

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B2GV90-F1-model_v2 AlphaFold B2GV90 1-132 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1560566 AgrOrtholog
BioCyc Gene G2FUF-57408 BioCyc
Ensembl Genes ENSRNOG00000020000 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000027094 ENTREZGENE
  ENSRNOT00000027094.8 UniProtKB/TrEMBL
  ENSRNOT00000101870 ENTREZGENE
  ENSRNOT00000101870.2 UniProtKB/TrEMBL
  ENSRNOT00000106056 ENTREZGENE
  ENSRNOT00000106056.2 UniProtKB/TrEMBL
  ENSRNOT00000166668.1 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7321704 IMAGE-MGC_LOAD
InterPro TMEM248/TMEM219 UniProtKB/TrEMBL
  TMEM248/TMEM219_dom UniProtKB/TrEMBL
MGC_CLONE MGC:188214 IMAGE-MGC_LOAD
NCBI Gene 308986 ENTREZGENE
PANTHER INSULIN-LIKE GROWTH FACTOR-BINDING PROTEIN 3 RECEPTOR UniProtKB/TrEMBL
  PTHR16002 UniProtKB/TrEMBL
Pfam TMEM219 UniProtKB/TrEMBL
PhenoGen Tmem219 PhenoGen
RatGTEx ENSRNOG00000020000 RatGTEx
UniProt A0A8I6AG17 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AHK8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8J8XJ36_RAT UniProtKB/TrEMBL
  A0ABK0LKA6_RAT UniProtKB/TrEMBL
  A6I9I3 ENTREZGENE, UniProtKB/TrEMBL
  A6I9I4 ENTREZGENE, UniProtKB/TrEMBL
  A6I9I5 ENTREZGENE, UniProtKB/TrEMBL
  B2GV90 ENTREZGENE, UniProtKB/TrEMBL
  D3ZPT4 ENTREZGENE
UniProt Secondary D3ZPT4 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-09-09 Tmem219  transmembrane protein 219  RGD1560566  RGD1560566   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1560566  RGD1560566   RGD1560566_predicted  RGD1560566 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1560566_predicted  RGD1560566 (predicted)  LOC308986  hypothetical LOC308986  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC308986  hypothetical LOC308986      Symbol and Name status set to provisional 70820 PROVISIONAL