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Gene: Arhgef37 (Rho guanine nucleotide exchange factor 37) Rattus norvegicus

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Symbol:

Arhgef37

Name:

Rho guanine nucleotide exchange factor 37

RGD ID:

1560471

Description:

Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be active in cytoplasm. Orthologous to human ARHGEF37 (Rho guanine nucleotide exchange factor 37); INTERACTS WITH (+)-schisandrin B; 1-naphthyl isothiocyanate; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC307398; probable guanine nucleotide exchange factor FLJ41603 homolog; protein 2-88; RGD1560471; Rho guanine nucleotide exchange factor (GEF) 37; scaffold protein tuba 3; similar to hypothetical protein 4933429F08

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	57,205,621 - 57,271,284 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	18	57,230,117 - 57,271,031 (-)	Ensembl				GRCr8
mRatBN7.2	18	54,935,256 - 55,001,017 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	54,949,110 - 55,000,669 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	18	57,051,280 - 57,094,308 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	57,765,896 - 57,808,923 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	55,581,554 - 55,624,552 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	56,817,986 - 56,871,159 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	56,817,988 - 56,870,839 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	18	56,048,373 - 56,099,860 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	18	57,473,010 - 57,524,775 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	18	53,099,857 - 53,151,266 (-)	NCBI		Celera
Cytogenetic Map	18	q12.1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1-naphthyl isothiocyanate (EXP)

17beta-estradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,4,4'-trichlorobiphenyl (ISO)

2,4-dichlorophenol (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

aflatoxin B1 (EXP,ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

belinostat (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

C60 fullerene (EXP)

cadmium dichloride (ISO)

calcitriol (ISO)

cisplatin (ISO)

coumestrol (ISO)

DDE (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

Enterolactone (ISO)

entinostat (ISO)

FR900359 (ISO)

lipopolysaccharide (ISO)

methapyrilene (ISO)

Moniliformin (ISO)

mono(2-ethylhexyl) phthalate (ISO)

N-nitrosodiethylamine (ISO)

N-Nitrosopyrrolidine (ISO)

O-methyleugenol (ISO)

okadaic acid (ISO)

ozone (ISO)

paracetamol (EXP)

PCB138 (ISO)

perfluorohexanesulfonic acid (ISO)

phenobarbital (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

testosterone (EXP,ISO)

tetrachloromethane (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triclosan (ISO)

Triptolide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

clathrin-dependent endocytosis (IEA,ISO)

Cellular Component

cytoplasm (IBA,IEA)

Molecular Function

guanyl-nucleotide exchange factor activity (IBA,IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932

Genomics

Comparative Map Data

Arhgef37
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	57,205,621 - 57,271,284 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	18	57,230,117 - 57,271,031 (-)	Ensembl				GRCr8
mRatBN7.2	18	54,935,256 - 55,001,017 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	54,949,110 - 55,000,669 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	18	57,051,280 - 57,094,308 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	57,765,896 - 57,808,923 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	55,581,554 - 55,624,552 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	56,817,986 - 56,871,159 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	56,817,988 - 56,870,839 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	18	56,048,373 - 56,099,860 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	18	57,473,010 - 57,524,775 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	18	53,099,857 - 53,151,266 (-)	NCBI		Celera
Cytogenetic Map	18	q12.1	NCBI

ARHGEF37
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	149,551,625 - 149,634,968 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	149,551,947 - 149,634,968 (+)	Ensembl			hg38	GRCh38
GRCh37	5	148,961,061 - 149,014,531 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	148,941,328 - 148,994,720 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	5	145,043,054 - 145,096,412 (+)	NCBI		Celera
Cytogenetic Map	5	q32	NCBI
HuRef	5	144,107,762 - 144,161,236 (+)	NCBI		HuRef
CHM1_1	5	148,393,556 - 148,446,911 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	150,086,803 - 150,169,655 (+)	NCBI		T2T-CHM13v2.0

Arhgef37
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	61,624,728 - 61,669,994 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	61,624,728 - 61,669,665 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	18	61,491,657 - 61,536,928 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	61,491,657 - 61,536,594 (-)	Ensembl			mm10	GRCm38
MGSCv37	18	61,653,448 - 61,696,190 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	18	61,619,163 - 61,634,648 (-)	NCBI		MGSCv36	mm8
Celera	18	62,776,175 - 62,819,028 (-)	NCBI		Celera
Cytogenetic Map	18	E1	NCBI
cM Map	18	34.62	NCBI

Arhgef37
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955415	4,858,355 - 4,900,786 (-)	Ensembl
ChiLan1.0	NW_004955415	4,850,120 - 4,900,483 (-)	NCBI	ChiLan1.0	ChiLan1.0

ARHGEF37
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	144,780,601 - 144,864,721 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	142,920,150 - 143,004,270 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	145,006,880 - 145,060,447 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	151,031,688 - 151,068,837 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	150,986,462 - 151,068,837 (+)	Ensembl			panPan2	panpan1.1

ARHGEF37
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	59,357,834 - 59,413,012 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	59,357,822 - 59,412,752 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	59,123,557 - 59,178,961 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	59,840,209 - 59,895,600 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	59,840,209 - 59,895,581 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	59,627,247 - 59,665,508 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	59,741,493 - 59,797,047 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	60,272,603 - 60,327,820 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Arhgef37
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	143,703,422 - 143,753,915 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936504	5,275,862 - 5,327,928 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936504	5,277,448 - 5,328,028 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ARHGEF37
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	150,660,685 - 150,747,220 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	2	150,662,470 - 150,751,648 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	157,427,173 - 157,504,238 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ARHGEF37
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	52,198,122 - 52,252,194 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	52,198,075 - 52,252,273 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666034	25,468,693 - 25,523,213 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Arhgef37
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624774	8,911,821 - 8,945,016 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624774	8,894,678 - 8,944,316 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Arhgef37
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	15	70,408,985 - 70,455,213 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Arhgef37
348 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	395
Count of miRNA genes:	211
Interacting mature miRNAs:	276
Transcripts:	ENSRNOT00000032189
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331733	Bp233	Blood pressure QTL 233	3.97196		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	25071126	83910656	Rat
1358358	Sradr6	Stress Responsive Adrenal Weight QTL 6	2.49		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	18	22015562	61600538	Rat
1331730	Scl27	Serum cholesterol level QTL 27	3.826		blood HDL cholesterol amount (VT:0000184)	serum high density lipoprotein cholesterol level (CMO:0000361)	18	54490801	86134022	Rat
1331741	Bp232	Blood pressure QTL 232	3.59112		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	23494057	85487725	Rat
1331742	Bp228	Blood pressure QTL 228	3.88752		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	31610505	77371277	Rat
1331736	Bp227	Blood pressure QTL 227	2.791		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	48917054	60064728	Rat
1300125	Rf26	Renal function QTL 26	3.2		urine potassium amount (VT:0010539)	urine potassium excretion rate (CMO:0000761)	18	53350521	68120379	Rat
631834	Sach3	Saccharin preference QTL 3	3.9	0.01	consumption behavior trait (VT:0002069)	calculated saccharin drink intake volume (CMO:0001600)	18	38575919	83575919	Rat
12904668	Bw188	Body weight QTL 188		0.03	body mass (VT:0001259)	body weight (CMO:0000012)	18	26822186	71822186	Rat
12904669	Cm125	Cardiac mass QTL 125		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	18	26822186	71822186	Rat
6893683	Bw110	Body weight QTL 110	2.7	0.002	body mass (VT:0001259)	body weight (CMO:0000012)	18	45620306	86134022	Rat
12904670	Cm126	Cardiac mass QTL 126		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	18	26822186	71822186	Rat
1331727	Bp237	Blood pressure QTL 237	3.053		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	31610505	63968306	Rat
12904677	Kidm72	Kidney mass QTL 72		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	18	26822186	71822186	Rat
9589041	Epfw12	Epididymal fat weight QTL 12	17.08	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	18	48915737	86134022	Rat
8694432	Bw165	Body weight QTL 165	3.81	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	18	48915737	86134022	Rat
12904673	Cm127	Cardiac mass QTL 127		0.005	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	18	26822186	71822186	Rat
12904675	Am19	Aortic mass QTL 19		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	18	26822186	71822186	Rat
70185	BpQTLcluster15	Blood pressure QTL cluster 15	4.61		arterial blood pressure trait (VT:2000000)	absolute change in systolic blood pressure (CMO:0000607)	18	53845175	61982387	Rat
1331774	Bp226	Blood pressure QTL 226	4.41065		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	31610505	77371277	Rat
9589816	Gluco68	Glucose level QTL 68	7.25	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	18	31990891	76990891	Rat
1331770	Bp234	Blood pressure QTL 234	3.807		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	45620306	86134022	Rat
61360	Eaey	Experimental allergic encephalomyelitis QTL y	3		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis duration (CMO:0001424)	18	49187226	62647720	Rat
2303120	Mamtr8	Mammary tumor resistance QTL 8		0.001	mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	18	31610505	85493247	Rat
1578667	Bss21	Bone structure and strength QTL 21	3.5		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	18	12066482	85493247	Rat
12880368	Bw187	Body weight QTL 187		0.045	body mass (VT:0001259)	body weight (CMO:0000012)	18	33379158	78379158	Rat
61367	Iddm4	Insulin dependent diabetes mellitus QTL 4	2.33	0.0074	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	18	40462383	85462383	Rat
1359020	Ppulsi2	Prepulse inhibition QTL 2	2.71		prepulse inhibition trait (VT:0003088)	acoustic startle response measurement (CMO:0001519)	18	54490801	76272247	Rat
1331752	Bw27	Body weight QTL 27	2.963		body mass (VT:0001259)	body weight (CMO:0000012)	18	54490801	68120379	Rat
9590318	Scort22	Serum corticosterone level QTL 22	7.64	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	18	31990891	76990891	Rat
1578661	Bss20	Bone structure and strength QTL 20	3.7		femur morphology trait (VT:0000559)	femoral neck cross-sectional area (CMO:0001697)	18	12066482	85493247	Rat
1331754	Bp230	Blood pressure QTL 230	4.61609		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	15642280	86134022	Rat
12904069	Cm123	Cardiac mass QTL 123		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	18	33379158	78379158	Rat
1331798	Bp224	Blood pressure QTL 224	3.53873		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	31610505	77371277	Rat
12904070	Cm124	Cardiac mass QTL 124		0.01	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	18	33379158	78379158	Rat
2303584	Gluco55	Glucose level QTL 55	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	18	50795212	86134022	Rat
12904071	Am18	Aortic mass QTL 18		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	18	33379158	78379158	Rat
2301413	Bp318	Blood pressure QTL 318		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	26822186	71822186	Rat
61383	Bp47	Blood pressure QTL 47	17.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	31522783	76522783	Rat
12904067	Cm122	Cardiac mass QTL 122		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	18	33379158	78379158	Rat
1331806	Bp229	Blood pressure QTL 229	4.36484		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	48917054	60064728	Rat
2301417	Bp319	Blood pressure QTL 319		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	33379158	78379158	Rat
12904073	Kidm71	Kidney mass QTL 71		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	18	33379158	78379158	Rat
1331780	Bp238	Blood pressure QTL 238	3.269		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	48917054	60064728	Rat
1331776	Bp225	Blood pressure QTL 225	2.829		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	31610505	77371277	Rat
631518	Bw11	Body weight QTL 11	2.8		body mass (VT:0001259)	body weight (CMO:0000012)	18	36121626	81121626	Rat
1641923	Colcr8	Colorectal carcinoma resistance QTL 8	3.1	0.0014	intestine integrity trait (VT:0010554)	poorly differentiated malignant colorectal tumor number (CMO:0002076)	18	31990891	76990891	Rat
8694366	Abfw8	Abdominal fat weight QTL 8	6.38	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	18	48915737	86134022	Rat
631509	Sald2	Serum aldosterone level QTL 2	2.9		blood aldosterone amount (VT:0005346)	serum aldosterone level (CMO:0000487)	18	26415821	71415821	Rat
631274	Sprol1	Serum protein level QTL 1	5.3		blood total protein amount (VT:0005567)	serum total protein level (CMO:0000661)	18	31644508	79484311	Rat
1598832	Glom11	Glomerulus QTL 11	2.9		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	18	53266671	86134022	Rat
1600373	Mamtr6	Mammary tumor resistance QTL 6			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	18	19553532	85493247	Rat
8694378	Bw157	Body weight QTL 157	3.59	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	18	31990891	76990891	Rat
2303571	Bw92	Body weight QTL 92	3		body mass (VT:0001259)	body weight (CMO:0000012)	18	50795212	86134022	Rat
61429	Cia17	Collagen induced arthritis QTL 17	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	18	31610505	72538878	Rat
7411719	Strs5	Sensitivity to stroke QTL 5	9.4		cerebrum integrity trait (VT:0010549)	percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)	18	52198059	68120379	Rat

Markers in Region

RH144289

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	54,957,812 - 54,958,072 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	56,826,691 - 56,826,950	NCBI	Rnor6.0
Rnor_5.0	18	56,057,078 - 56,057,337	UniSTS	Rnor5.0
RGSC_v3.4	18	57,481,715 - 57,481,974	UniSTS	RGSC3.4
Celera	18	53,108,562 - 53,108,821	UniSTS
RH 3.4 Map	18	541.0	UniSTS
Cytogenetic Map	18	q12.1	UniSTS

BI277765

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	54,957,718 - 54,957,879 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	56,826,597 - 56,826,757	NCBI	Rnor6.0
Rnor_5.0	18	56,056,984 - 56,057,144	UniSTS	Rnor5.0
RGSC_v3.4	18	57,481,621 - 57,481,781	UniSTS	RGSC3.4
Celera	18	53,108,468 - 53,108,628	UniSTS
Cytogenetic Map	18	q12.1	UniSTS

BE107988

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	54,958,920 - 54,959,097 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	56,827,799 - 56,827,975	NCBI	Rnor6.0
Rnor_5.0	18	56,058,186 - 56,058,362	UniSTS	Rnor5.0
RGSC_v3.4	18	57,482,823 - 57,482,999	UniSTS	RGSC3.4
Celera	18	53,109,670 - 53,109,846	UniSTS
RH 3.4 Map	18	541.5	UniSTS
Cytogenetic Map	18	q12.1	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	157	91	90	59	74	59	6	338	174	11	136	81	92	31	12	12

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001100974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254807	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254809	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254811	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096828	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096832	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096835	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010059572	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010059573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010059574	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010059575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB199794	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC168236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000032189 ⟹ ENSRNOP00000037964

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	57,230,117 - 57,271,031 (-)	Ensembl
mRatBN7.2 Ensembl	18	54,949,110 - 55,000,669 (-)	Ensembl
Rnor_6.0 Ensembl	18	56,817,988 - 56,870,839 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000087188 ⟹ ENSRNOP00000069658

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	18	56,825,396 - 56,870,801 (-)	Ensembl

RefSeq Acc Id:

NM_001100974 ⟹ NP_001094444

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	57,228,033 - 57,271,031 (-)	NCBI
mRatBN7.2	18	54,957,668 - 55,000,669 (-)	NCBI
Rnor_6.0	18	56,817,986 - 56,870,839 (-)	NCBI
Rnor_5.0	18	56,048,373 - 56,099,860 (-)	NCBI
RGSC_v3.4	18	57,473,010 - 57,524,775 (-)	RGD
Celera	18	53,099,857 - 53,151,266 (-)	RGD

Sequence:

show sequence

GGCAACTGACAAAGGCGGGGGCGCGCTCTGCGCGTGCACAGCAGACAGAGGAGCTGCACTCGCA
GCCGGAGCCCAGCGGGTGCGAGTGACACCGGAGGGCATCCGGCGCGTGCGCGAACCTGTGGACA
TGGCTGACTTTGAAACAGATGAGGCCTCTTCCAAGTCAGAGAGCCCTGAGCAGGAAGGCCAGGG
TTCTGAGGACAAATCTCTGCTCCATCAGAGGCTGGCCATCAGAGAGCTCATCGACACAGAAGTC
TCCTACTTGCACACACTCCGACTCTGTACCTCTGACATCAGAGGCCACCTACAGCAGCTGCCGC
CAGGAGATCTGGACATACTGTTCTCAAACATCGATGACATCATCCAAGTGAGCAGCAGATTCCT
TCACGGGCTGCAGGAGACAGCCTGCAAGGAAGAGAAACAAGCACACTTGATTGGTAACTTATTC
CTGGAATTCCAAGAGGAGCTTGAACAAGTCTATAAAGTCTACTGTGCCAACTATGACCAGGCCC
TGCTGCTGGTCAAGGCATACCAGAAGGAGCCGGAACTCCAGAAGGAGATCCAGGGCATCATCGA
AGCTGCAGTGCCACAAGCTGGACCTTCGGGTCTCAGTTTCTTACTTGTAATCCCTCTGCAGAGG
ATTACCAAGTACCCCCTCCTGCTGCAGAAAATCCTGGAGAACACACCTGCGGATGCCAGTGCCC
ACCCTGTCCTTCAGAGAGCCACCTCTGCCCTCCAGGATGTGAACAGCAATATCAACGAGTACAA
GATGCGCAAGGAAGTGGCCTTAAAGTATACCAAAGTGGAGCAGCTGAGCCTTCGGGAGCGGCTG
GCCCGCATCAACACCCATACTCTTTCCAAGAAGACCACCAGGCTGAGCCAGCTGCTGAAGCAGG
AGGCGGGGCTCGTACCCAGGACAGAAGACAAGGAATTTGATGACTTGGAGGAGAGATTCCAGTG
GGTGTCTCTGTGCGTGACAGAGCTGAAGAGCAATGTGGCAGCTTACATGGATAATCTGGAGGCT
TTCCTCTGCTTCCGGCCACACGAGCGGAACCTGGATATCCCTGGGGGAGCTGCGGAACAGTACT
GCAGCCTAGCGAGGGACCTTCAGCTCCAGGCCTTCCTGCAGTTTAAGCAGCGGTTAACAGGCCT
GGTGTGGCAACCATTGTGCAGTCTGGCCAGAGCCCTGGTTGGCCCTCAGAACTTGATCAAGAAA
CGTCTGGACAAACTCCTGGACTTCGAGAGAGTAGAAGAAAAACTGTTGGATGTGGGCAGTGTGA
CCTATGAGGAAGAGGCGGCCCGGCACACGTACCAGGCACTCAACTCCTTGATAGTGGCTGAGCT
CCCACAGTTTAACCACCTCGTCATGCAGTGGCTGGGCCAGATTCTGCGCACATTTGTGGTCCTC
CAGAGAGACCTTGCAGACCAAGTGCTGCGAAGGGCAGAGAGCAGCATGGCCCTGCTGCCTCATC
GCCACGTCTCCGAGCCGGACTTCCAGAAGCTGCTGGAGGACACGCTAGGCCAGAGCAGTAGCCA
GCTCCGCCACTTTCGGGAGAGCTTTGAGAAAGTGCTTCCACCCTCCACCTCGCAGCCACTCCTT
CCAGGGTCTGAACACCAGATGCAATCTCTCCTCACCAGATATGGCCCTGGGAAGATATACCAGG
TGACAAGCAACATCAATGGCACTGGGACCCTGGACCTGACACTGCCTCGGGGCCAAATCGTGGC
CCTTCTACAAAACAAGGACACCAAAGGCAACAACAGTCGCTGGCTGGTAGACACAGGGGGACAC
CGGGGATACGTGCCAGCTGGAAAACTTCAGCTATATCACCCTATCAATCCCAGTGAGAAGGAGC
CCAGACGCCAGACAGGGATGCCTGAAGACTACTGGCTTCCAACCCCAGAGCCCACCCAACCCTC
TGTCCCCACTGTCCCGACCATGAGCCAGGTGGTGGCCGTGTACCCTTTTGTGGCCAGGAGCACC
CACGAGTTGAGTCTACAGGCAGGCCAGCCTGTGACCATCCTGGAAGCCCAAGACAAGAAGGGGA
ACCCAGAATGGAGCCTGGTGGAAGCAAACGGACAGAGGGGATATGTACCTTCCAACTTTCTGGC
CAGGACTCCGAGTCCAACTCCCCGGGGCTGGAATCTTCCCTCTTAGCATGACCTCTTGGGAACC
CCATTCCTAAGGAAAGGCGGAGGCTTAAAAGCTGTGTGACCTAGGGGGGATGGCGCAAAGCACA
GTGGGAATGGGAGAGGCGTGAAGGGCACCCAGAAGGCAGCAGGAAGTGATTACTAGGCCTTACA
GAATGCCTGGTGTGGGAGGCCACAGTGGGTGGTTCGGCAGTGCCACTGTGATCTGCATAAAGAA
GCCATCTCTAGGCCACAGCTGATTAGCTAAGGCTTGCCACAGCTCGAAGCTCACCCTACCTCTT
CTTACCTCTTTCATGTCTAGGATGAATGTGGCCTGTGTTAGTTGCAGGTGGGGCCTCTCTGAAG
ACGACCAGGCCTGCTTGGCTCTGTAGTACACTTCCCACAGTGTTGCCAGGAAACACCGTGGCTC
GTCAGTCATCTTTTCTTTCTTACTGCCTTGCACTGAGTTATTGTGAACAGTGAACTGTGGAGAG
TCCTGCTCAAGGGGAAGCCATGGGCCTAGGTTCTGAGGAGATTGTCTACTGTGTCTGGGAATGG
GTGTGGTCTCTGCATAGGTCTGGAACGTGTGTACAAACTTGTAGGTGGTTCCAGGGAAGAGGGG
AATTTGAGGGTGAATTAGTGGGTGTGAGAGGCTGATTGCAATGGTAACTACTGGTGTTTTCTTC
AGAGTAGGAAACAAAGGAACTTGTGACATAGGTGACTACTGGCCTGGCAAGTCGGAGCTGCGGG
GAGGTGACATGAAGGAATCCAGTTTATGTGATAAATCCAGGTACTATCACATAGAAAGCTCTGA
AGAGCAGCGATCTTAACAAAACAGAACAAGACAAAACAACAAACAATTAAACAACCCTCGGCAG
CAACCATGGCAGCCAGCCACAGTGGAGTTCATTCTCCGTAGGATCCCCAAGAAACAAGCATTGG
GATGGAGCCCTGGGACTCTCCCGTGAGGCAGGGCCAAGCCCAGAGCTATTAGTACGTTGCCTTG
TTGCTTCAAAGCAATCTCCAGCATTTCTCGAGCACTCGTGTGTCCCAGCTGCTGAGCCAGCCAA
GTGGCTTGGAAGCACAGACTCATTTATGCTGTTACGTCACAATGATGCTCTGGATGCTGCGATC
GCACGTCCTCTGCAAGAAGAACTACAGGCACTGATGGGTGACAATGACGTCGGGGAATACTGAT
CATCATGAATGAGTGCCTTAACATCTGCCATGCACGAGCGCTGTGCTGAGCGTCTCACACACAT
CTGTCTCCATGACATCAGCGTCATGCAGAAACTGCTATCTCCCCCTTTTAAAGATGAGAAAACT
GAGACTCAAGGCACTCGAGTTACCAGAAGGCCGTGGAGAGAGAGGCCCGGAGCTTGGATCTCAA
CTCTGGTGTATGGTTGGGTTGACTTTGATGAGGTGAGGAAGCAGAGCAATCACGTGAGGAGCTT
CTTCTGTGGGCTGAGCTTTGACCTCTTACCCGTGTCTTCCCGGCATCCCTGTGTCCTGTTGCTA
TGCCTCTCCACAGTTTTCAATGCACTGCTGTCCCATATGAGTACGAAGAGTCCCAAACTGTGAA
GGGGTCCTAGAGGCCAGGATGTATTGGAAGCCATTCTAGTAGTTAGGAATATCACAGGATTTGA
ACACACCTGACTCCAGCTCGTCTGTTCACTGTACTCTTAGAGAGCTCCCCTGACTATAACAGAG
CACCAAGCGCCTACCTTTTCCTTTCCCCACACTCTTAAGCTCTGGGTTCATGTGGACTCATGTT
GGATCCGCATGGCCTGTGTGTATTTCCCACTTCTGGGTCCTTCTGCCTACCTCCGTAGTCTTCA
GACCCACCACCAGGTCTGCTCAGATATGCAGGCTTTATTACCACTCCTTTTAGGGCTCTCGATC
AGGGCCACGCACTCTGGTTCTTGCTCTGGTTCCTGCCCTTATCCCCTCTGTGAACCGCGCTCTT
TGACCGAGCGGAATCATCTGCAATGCTGTCTCTGCTTCTTGGCCACACACTCTTACTTCAGAGT
GAAACACTGGTGTCCCTACCTTCCTGCTTTAAGCATCTTTCAACCCTCAGTAACTGTCGCCTCT
TCCAGGAAGCTTTCCTGGCTTTGCTTAGGCACTCTTCCTACGTGTGTATTTATGGGGATCTTCT
CCTTTTGTAAGTGAGATTTTTCTTAAGGGTCTCTCCCGCTGCGCTAGCTCCACGCGGGCAGGGG
TTTTGTCTGTCTGCTCAGGCTGCGGTCCCGGGGCCTGGTACCATATTGGGTGCATGGCAGGTGC
TCAGTGAAACACTGCTGAATAAATGAATGAATGCATCAGTGAGAATTTCTACTGTTAAAAAAAA
AAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006254809 ⟹ XP_006254871

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	57,228,033 - 57,271,017 (-)	NCBI
mRatBN7.2	18	54,957,668 - 55,000,714 (-)	NCBI
Rnor_6.0	18	56,826,546 - 56,870,738 (-)	NCBI
Rnor_5.0	18	56,048,373 - 56,099,860 (-)	NCBI

Sequence:

show sequence

TCCGGCGCGTGCGCGGTGAGTCCAGCCTGGCGACAGGATGTCGCCAGGAGGGTTGCGGGGAAAC
AGCTGCTGGACAGATGAGAACCTGTGGACATGGCTGACTTTGAAACAGATGAGGCCTCTTCCAA
GTCAGAGAGCCCTGAGCAGGAAGGCCAGGGTTCTGAGGACAAATCTCTGCTCCATCAGAGGCTG
GCCATCAGAGAGCTCATCGACACAGAAGTCTCCTACTTGCACACACTCCGACTCTGTACCTCTG
ACATCAGAGGCCACCTACAGCAGCTGCCGCCAGGAGATCTGGACATACTGTTCTCAAACATCGA
TGACATCATCCAAGTGAGCAGCAGATTCCTTCACGGGCTGCAGGAGACAGCCTGCAAGGAAGAG
AAACAAGCACACTTGATTGGTAACTTATTCCTGGAATTCCAAGAGGAGCTTGAACAAGTCTATA
AAGTCTACTGTGCCAACTATGACCAGGCCCTGCTGCTGGTCAAGGCATACCAGAAGGAGCCGGA
ACTCCAGAAGGAGATCCAGGGCATCATCGAAGCTGCAGTGCCACAAGCTGGACCTTCGGGTCTC
AGTTTCTTACTTGTAATCCCTCTGCAGAGGATTACCAAGTACCCCCTCCTGCTGCAGAAAATCC
TGGAGAACACACCCGCGGATGCCAGTGCCCACCCTGTCCTTCAGAGAGCCACCTCTGCCCTCCA
GGATGTGAACAGCAATATCAACGAGTACAAGATGCGCAAGGAAGTGGCCTTAAAGTATACCAAA
GTGGAGCAGCTGAGCCTTCGGGAGCGGCTGGCCCGCATCAACACCCATACTCTTTCCAAGAAGA
CCACCAGGCTGAGCCAGCTGCTGAAGCAGGAGGCGGGGCTCGTACCCAGGACAGAAGACAAGGA
ATTTGATGACTTGGAGGAGAGATTCCAGTGGGTGTCTCTGTGCGTGACAGAGCTGAAGAGCAAT
GTGGCAGCTTACATGGATAATCTGGAGGCTTTCCTCTGCTTCCGGCCACACGAGCGGAACCTGG
ATATCCCTGGGGGAGCTGCGGAACAGTACTGCAGCCTAGCGAGGGACCTTCAGCTCCAGGCCTT
CCTGCAGTTTAAGCAGCGGTTAACAGGCCTGGTGTGGCAACCATTGTGCAGTCTGGCCAGAGCC
CTGGTTGGCCCTCAGAACTTGATCAAGAAACGTCTGGACAAACTCCTGGACTTCGAGAGAGTAG
AAGAAAAACTGTTGGATGTGGGCAGTGTGACCTATGAGGAAGAGGCGGCCCGGCACACGTACCA
GGCACTCAACTCCTTGATAGTGGCTGAGCTCCCACAGTTTAACCACCTCGTCATGCAGTGGCTG
GGCCAGATTCTGCGCACATTTGTGGTCCTCCAGAGAGACCTTGCAGACCAAGTGCTGCGAAGGG
CAGAGAGCAGCATGGCCCTGCTGCCTCATCGCCACGTCTCCGAGCCGGACTTCCAGAAGCTGCT
GGAGGACACGCTAGGCCAGAGCAGTAGCCAGCTCCGCCACTTTCGGGAGAGCTTTGAGAAAGTG
CTTCCACCCTCCACCTCGCAGCCACTCCTTCCAGGGTCTGAACACCAGATGCAATCTCTCCTCA
CCAGATATGGCCCTGGGAAGATATACCAGGTGACAAGCAACATCAATGGCACTGGGACCCTGGA
CCTGACACTACCTCGGGGCCAAATCGTGGCCCTTCTACAAAACAAGGACACCAAAGGCAACAAC
AGTCGCTGGCTGGTAGACACAGGGGGACACCGGGGATACGTGCCAGCTGGAAAACTTCAGCTAT
ATCACCCTATCAATCCCAGTGAGAAGGAGCCCAGACGCCAGACAGGGATGCCTGAAGACTACTG
GCTTCCAACCCCAGAGCCCACCCAACCCTCTGTCCCCACTGTCCCGACCATGAGCCAGGTGGTG
GCCGTGTACCCTTTTGTGGCCAGGAGCACCCACGAGTTGAGTCTACAGGCAGGCCAGCCTGTGA
CCATCCTGGAAGCCCAAGACAAGAAGGGGAACCCAGAATGGAGCCTGGTGGAAGCAAACGGACA
GAGGGGATATGTACCTTCCAACTTTCTGGCCAGGACTCCGAGTCCAACTCCCTGGGGCTGGAAT
CTTCCCTCTTAGCATGACCTCTTGGGAACCCCATTCCTAAGGAAAGGCGGAGGCTTAAAAGCTG
TGTGACCTAGGGGGGATGGCGCAAAGCACAGTGGGAATGGGAGAGGCGTGAAGGGCACCCAGAA
GGCAGCAGGAAGTGATTACTAGGCCTTACAGAATGCCTGGTGTGGGAGGCCACAGTGGGTGGTT
CGGCAGTGCCACTGTGATCTGCATAAAGAAGCCATCTCTAGGCCACAGCTGATTAGCTAAGGCT
TGCCACAGCTCGAAGCTCACCCTACCTCTTCTTACCTCTTTCATGTCTAGGATGAATGTGGCCT
GTGTTAGTTGCAGGTGGGGCCTCTCTGAAGACGACCAGGCCTGCTTGGCTCTGTAGTACACTTC
CCACAGTGTTGCCAGGAAACACCGTGGCTCGTCAGTCATCTTTTCTTTCTTACTGCCTTGCACT
GAGTTATTGTGAACAGTGAACTGTGGAGAGTCCTGCTCAAGGGGAAGCCATGGGCCTAGGTTCT
GAGGAGATTGTCTACTGTGTCTGGGAATGGGTGTGGTCTCTGCATAGGTCTGGAACGTGTGTAC
AAACTTGTAGGTGGTTCCAGGGAAGAGGGGAATTTGAGGGTGAATTAGTGGGTGTGAGAGGCTG
ATTGCAATGGTAACTACTGGTGTTTTCTTCAGAGTAGGAAACAAAGGAACTTGTGACATAGGTG
ACTACTGGCCTGGCAAGTCGGGTAAGTGAGGGATAGCGTGGTTTCCTGGCTCTGGGTAGAAGAA
CCACGAGAACACAGGGGGCCTAGCTTTGCCTCTGAGGACCTGGAGGCAGTAAGGAGCTGAGGTT
GGGTAGATGTGAGGCCTAAGACATAGGACCCAATTGCAGTTTTCCACGTAGGGAAAAAAACAAA
ACAAAACTAAGTCATGGGAAGCAGTAGGGATGGCATGAGGCTGGAGGTGCAAGGGTCCCTTGTC
AACCAGGATGTGCGACACCAACACAAAGACTGTTAGTGGTGTCAGGATGGCCCAGCCATTGCCT
GGCGTGGGTTAGCAGAGTAAAGCAGTCCTGTTGCTACCTGTCACGTCCCATGTTCAGGCCAATG
GTGTCCTTTTCCTTAAACCCAGGCTCTGATTCCAGGCCCAGTCAGCATGGATTAACAATAGACA
ATTGTTAGGGGGTTCTGTTCTGTGTGAGCATCATGGAGTGTGCAAACTAACAAGGTTATGACAT
CACTAGGCAATATAATCTCATGGGACTTTGACATACACAAAGCCATTGCCTATAGCTGGCTGTT
GCATGGCGCATGACATATGGGTACAATCTAGGTAGCCAAAGTCCCAGTGCCTGGTACTTGATGA
GCAGGTCATTTCTCAAATCTGGAAACAGAAACCCCTCAAAGCAGACCTTGTTTCTGGATGACAG
GCCCACAGGGGCATGCTGGGTGTCGTCACTACTGGGCAATGTCCCTAGGCTGTTGCTTTAGGTC
AAGAGTCATCAGAAGATCCCAAGACAGTGAAAAGGGTGATCCACTCTGACCTGTGTACAACTGA
CAGATTTGGAATCGACCCTCTTGAGAGACAGAGAGTAAAACAGGTGGCTATTTCAGTGTTTCCA
AGACTACGTCTGTTTTTACAACTCAAGCGCCTGTTTGTTAACTTTGGCTTCTGAAGGGCTCTTG
AGAAAGGCAGCTCGCCTGTGTCAGACGGTCTGTAATGTGCCTCCTCTGGGCTTGTTGAAGCACC
AATGCCGGATGATGCAAGAGCAAGGCTACGCAGCTCCTTTCCCAACCTCAGGTTCTCTCGAAGG
ACGTTCTCAGCTCAGTTTCCTGTCCGTTTCCTTCTCGGGCTTCTAATCAAAACAGGAAGCATAG
ACAAAACACACGACAAAGCAGGCTGTACCTGCAGCTTCCACAGCTCGTTGTGAAGCTGAGACTC
TAGCTTGGAGTTCTTAGCATGGCTCTTCGCTGCTGCAATTACCTGGGTTGCCCTAAACGGCAGC
AAACCAGGAGCCCACCCAGAGAGAGCTGATGTCATTCATCTGGGCACGATCATGGCCTTGGGCT
TCAGGAAGCTACCCAGGTGAATCTCACAGGTAGCCACGTTAAGAACCTCTGCCTTAGACATGCA
GAGGTAAACAGCTAGACCTGGTCAGAGTTGGGACAGGGTAAGTTAAGTCATGCCCCACCTGAGC
TTTGCGCTGGCTCTCTAAGCAGGAAGCTTTGGAAGCAGTTTGGAGTAGGACAGCCTGTTCTGTC
AGGTCCCAAAATATATCTTTATTAAGTGCCGTTAAAGGGGACCTGAATGAAATTGAATGTTCTT
GTAGGCATAAGGGAGAAAAAAAATGAAATATACTTTGAACCAAGGCTATCTCATGAAGGAGAAA
TAAAAATGTGTCCAGTACATGTGGGTTATAGCTTCTCAGACCAGGGGGTGAGATTAAAGTCACT
GGAGAGTGAGAGAAAGCATACTGAGAAGATGGAGCATGGCCTGGATCTTCACCCAGGGACTCTG
TGTAATGTGCCTTTTTACCCCAATGCCTAGAGCCATTGCACTGTGTCTTATTTATTTCACTCTT
GGGCTGTCACGTGCACGCTCACAACGAGAATTGCCTAAGAATGGAACAGAACTCCCAGGAGTCG
AAGAGTGGTTCATATGGTACCCCCTGATCCTCAAAGTGAAGTGGGAACTCTTTAACCCTTTGAG
CCCCAACGTAGTTTAGGATACAGGGAGACGATTGTATTATCCAAGGGAAGACGAGGGAATTCTT
GAGTCGTGTGATGAGCGTGATGTGACCACTGGCAATAAAGGACTTAGTATGACTCCA

hide sequence

RefSeq Acc Id:

XM_006254811 ⟹ XP_006254873

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	57,228,033 - 57,271,284 (-)	NCBI
mRatBN7.2	18	54,957,668 - 55,001,017 (-)	NCBI
Rnor_6.0	18	56,826,546 - 56,871,159 (-)	NCBI
Rnor_5.0	18	56,048,373 - 56,099,860 (-)	NCBI

Sequence:

show sequence

TTCCTTTGAGAGCTGGCTGTGATTTTGATACCCACTGCAGTCCTCTCCTTATGTTGCTTCTGGT
CATGTGTTAATCGCAGCAACGGAAAGTAAGTTAAGACACTGCCCTGGAGTTTTCTGGTTGCAGT
ACAGAAGAAACCCATTGCCAGCAGGAGAGCCCACTAGCCGACCTGTGGCCCTGGTTTTGGGGTG
AAGTCGGGCAGAACCTGTGGACATGGCTGACTTTGAAACAGATGAGGCCTCTTCCAAGTCAGAG
AGCCCTGAGCAGGAAGGCCAGGGTTCTGAGGACAAATCTCTGCTCCATCAGAGGCTGGCCATCA
GAGAGCTCATCGACACAGAAGTCTCCTACTTGCACACACTCCGACTCTGTACCTCTGACATCAG
AGGCCACCTACAGCAGCTGCCGCCAGGAGATCTGGACATACTGTTCTCAAACATCGATGACATC
ATCCAAGTGAGCAGCAGATTCCTTCACGGGCTGCAGGAGACAGCCTGCAAGGAAGAGAAACAAG
CACACTTGATTGGTAACTTATTCCTGGAATTCCAAGAGGAGCTTGAACAAGTCTATAAAGTCTA
CTGTGCCAACTATGACCAGGCCCTGCTGCTGGTCAAGGCATACCAGAAGGAGCCGGAACTCCAG
AAGGAGATCCAGGGCATCATCGAAGCTGCAGTGCCACAAGCTGGACCTTCGGGTCTCAGTTTCT
TACTTGTAATCCCTCTGCAGAGGATTACCAAGTACCCCCTCCTGCTGCAGAAAATCCTGGAGAA
CACACCCGCGGATGCCAGTGCCCACCCTGTCCTTCAGAGAGCCACCTCTGCCCTCCAGGATGTG
AACAGCAATATCAACGAGTACAAGATGCGCAAGGAAGTGGCCTTAAAGTATACCAAAGTGGAGC
AGCTGAGCCTTCGGGAGCGGCTGGCCCGCATCAACACCCATACTCTTTCCAAGAAGACCACCAG
GCTGAGCCAGCTGCTGAAGCAGGAGGCGGGGCTCGTACCCAGGACAGAAGACAAGGAATTTGAT
GACTTGGAGGAGAGATTCCAGTGGGTGTCTCTGTGCGTGACAGAGCTGAAGAGCAATGTGGCAG
CTTACATGGATAATCTGGAGGCTTTCCTCTGCTTCCGGCCACACGAGCGGAACCTGGATATCCC
TGGGGGAGCTGCGGAACAGTACTGCAGCCTAGCGAGGGACCTTCAGCTCCAGGCCTTCCTGCAG
TTTAAGCAGCGGTTAACAGGCCTGGTGTGGCAACCATTGTGCAGTCTGGCCAGAGCCCTGGTTG
GCCCTCAGAACTTGATCAAGAAACGTCTGGACAAACTCCTGGACTTCGAGAGAGTAGAAGAAAA
ACTGTTGGATGTGGGCAGTGTGACCTATGAGGAAGAGGCGGCCCGGCACACGTACCAGGCACTC
AACTCCTTGATAGTGGCTGAGCTCCCACAGTTTAACCACCTCGTCATGCAGTGGCTGGGCCAGA
TTCTGCGCACATTTGTGGTCCTCCAGAGAGACCTTGCAGACCAAGTGCTGCGAAGGGCAGAGAG
CAGCATGGCCCTGCTGCCTCATCGCCACGTCTCCGAGCCGGACTTCCAGAAGCTGCTGGAGGAC
ACGCTAGGCCAGAGCAGTAGCCAGCTCCGCCACTTTCGGGAGAGCTTTGAGAAAGTGCTTCCAC
CCTCCACCTCGCAGCCACTCCTTCCAGGGTCTGAACACCAGATGCAATCTCTCCTCACCAGATA
TGGCCCTGGGAAGATATACCAGGTGACAAGCAACATCAATGGCACTGGGACCCTGGACCTGACA
CTACCTCGGGGCCAAATCGTGGCCCTTCTACAAAACAAGGACACCAAAGGCAACAACAGTCGCT
GGCTGGTAGACACAGGGGGACACCGGGGATACGTGCCAGCTGGAAAACTTCAGCTATATCACCC
TATCAATCCCAGTGAGAAGGAGCCCAGACGCCAGACAGGGATGCCTGAAGACTACTGGCTTCCA
ACCCCAGAGCCCACCCAACCCTCTGTCCCCACTGTCCCGACCATGAGCCAGGTGGTGGCCGTGT
ACCCTTTTGTGGCCAGGAGCACCCACGAGTTGAGTCTACAGGCAGGCCAGCCTGTGACCATCCT
GGAAGCCCAAGACAAGAAGGGGAACCCAGAATGGAGCCTGGTGGAAGCAAACGGACAGAGGGGA
TATGTACCTTCCAACTTTCTGGCCAGGACTCCGAGTCCAACTCCCTGGGGCTGGAATCTTCCCT
CTTAGCATGACCTCTTGGGAACCCCATTCCTAAGGAAAGGCGGAGGCTTAAAAGCTGTGTGACC
TAGGGGGGATGGCGCAAAGCACAGTGGGAATGGGAGAGGCGTGAAGGGCACCCAGAAGGCAGCA
GGAAGTGATTACTAGGCCTTACAGAATGCCTGGTGTGGGAGGCCACAGTGGGTGGTTCGGCAGT
GCCACTGTGATCTGCATAAAGAAGCCATCTCTAGGCCACAGCTGATTAGCTAAGGCTTGCCACA
GCTCGAAGCTCACCCTACCTCTTCTTACCTCTTTCATGTCTAGGATGAATGTGGCCTGTGTTAG
TTGCAGGTGGGGCCTCTCTGAAGACGACCAGGCCTGCTTGGCTCTGTAGTACACTTCCCACAGT
GTTGCCAGGAAACACCGTGGCTCGTCAGTCATCTTTTCTTTCTTACTGCCTTGCACTGAGTTAT
TGTGAACAGTGAACTGTGGAGAGTCCTGCTCAAGGGGAAGCCATGGGCCTAGGTTCTGAGGAGA
TTGTCTACTGTGTCTGGGAATGGGTGTGGTCTCTGCATAGGTCTGGAACGTGTGTACAAACTTG
TAGGTGGTTCCAGGGAAGAGGGGAATTTGAGGGTGAATTAGTGGGTGTGAGAGGCTGATTGCAA
TGGTAACTACTGGTGTTTTCTTCAGAGTAGGAAACAAAGGAACTTGTGACATAGGTGACTACTG
GCCTGGCAAGTCGGGTAAGTGAGGGATAGCGTGGTTTCCTGGCTCTGGGTAGAAGAACCACGAG
AACACAGGGGGCCTAGCTTTGCCTCTGAGGACCTGGAGGCAGTAAGGAGCTGAGGTTGGGTAGA
TGTGAGGCCTAAGACATAGGACCCAATTGCAGTTTTCCACGTAGGGAAAAAAACAAAACAAAAC
TAAGTCATGGGAAGCAGTAGGGATGGCATGAGGCTGGAGGTGCAAGGGTCCCTTGTCAACCAGG
ATGTGCGACACCAACACAAAGACTGTTAGTGGTGTCAGGATGGCCCAGCCATTGCCTGGCGTGG
GTTAGCAGAGTAAAGCAGTCCTGTTGCTACCTGTCACGTCCCATGTTCAGGCCAATGGTGTCCT
TTTCCTTAAACCCAGGCTCTGATTCCAGGCCCAGTCAGCATGGATTAACAATAGACAATTGTTA
GGGGGTTCTGTTCTGTGTGAGCATCATGGAGTGTGCAAACTAACAAGGTTATGACATCACTAGG
CAATATAATCTCATGGGACTTTGACATACACAAAGCCATTGCCTATAGCTGGCTGTTGCATGGC
GCATGACATATGGGTACAATCTAGGTAGCCAAAGTCCCAGTGCCTGGTACTTGATGAGCAGGTC
ATTTCTCAAATCTGGAAACAGAAACCCCTCAAAGCAGACCTTGTTTCTGGATGACAGGCCCACA
GGGGCATGCTGGGTGTCGTCACTACTGGGCAATGTCCCTAGGCTGTTGCTTTAGGTCAAGAGTC
ATCAGAAGATCCCAAGACAGTGAAAAGGGTGATCCACTCTGACCTGTGTACAACTGACAGATTT
GGAATCGACCCTCTTGAGAGACAGAGAGTAAAACAGGTGGCTATTTCAGTGTTTCCAAGACTAC
GTCTGTTTTTACAACTCAAGCGCCTGTTTGTTAACTTTGGCTTCTGAAGGGCTCTTGAGAAAGG
CAGCTCGCCTGTGTCAGACGGTCTGTAATGTGCCTCCTCTGGGCTTGTTGAAGCACCAATGCCG
GATGATGCAAGAGCAAGGCTACGCAGCTCCTTTCCCAACCTCAGGTTCTCTCGAAGGACGTTCT
CAGCTCAGTTTCCTGTCCGTTTCCTTCTCGGGCTTCTAATCAAAACAGGAAGCATAGACAAAAC
ACACGACAAAGCAGGCTGTACCTGCAGCTTCCACAGCTCGTTGTGAAGCTGAGACTCTAGCTTG
GAGTTCTTAGCATGGCTCTTCGCTGCTGCAATTACCTGGGTTGCCCTAAACGGCAGCAAACCAG
GAGCCCACCCAGAGAGAGCTGATGTCATTCATCTGGGCACGATCATGGCCTTGGGCTTCAGGAA
GCTACCCAGGTGAATCTCACAGGTAGCCACGTTAAGAACCTCTGCCTTAGACATGCAGAGGTAA
ACAGCTAGACCTGGTCAGAGTTGGGACAGGGTAAGTTAAGTCATGCCCCACCTGAGCTTTGCGC
TGGCTCTCTAAGCAGGAAGCTTTGGAAGCAGTTTGGAGTAGGACAGCCTGTTCTGTCAGGTCCC
AAAATATATCTTTATTAAGTGCCGTTAAAGGGGACCTGAATGAAATTGAATGTTCTTGTAGGCA
TAAGGGAGAAAAAAAATGAAATATACTTTGAACCAAGGCTATCTCATGAAGGAGAAATAAAAAT
GTGTCCAGTACATGTGGGTTATAGCTTCTCAGACCAGGGGGTGAGATTAAAGTCACTGGAGAGT
GAGAGAAAGCATACTGAGAAGATGGAGCATGGCCTGGATCTTCACCCAGGGACTCTGTGTAATG
TGCCTTTTTACCCCAATGCCTAGAGCCATTGCACTGTGTCTTATTTATTTCACTCTTGGGCTGT
CACGTGCACGCTCACAACGAGAATTGCCTAAGAATGGAACAGAACTCCCAGGAGTCGAAGAGTG
GTTCATATGGTACCCCCTGATCCTCAAAGTGAAGTGGGAACTCTTTAACCCTTTGAGCCCCAAC
GTAGTTTAGGATACAGGGAGACGATTGTATTATCCAAGGGAAGACGAGGGAATTCTTGAGTCGT
GTGATGAGCGTGATGTGACCACTGGCAATAAAGGACTTAGTATGACTCCA

hide sequence

RefSeq Acc Id:

XM_039096828 ⟹ XP_038952756

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	57,228,033 - 57,271,050 (-)	NCBI
mRatBN7.2	18	54,957,668 - 55,000,714 (-)	NCBI

RefSeq Acc Id:

XM_039096832 ⟹ XP_038952760

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	57,228,033 - 57,253,846 (-)	NCBI
mRatBN7.2	18	54,957,668 - 54,983,488 (-)	NCBI

RefSeq Acc Id:

XM_039096833 ⟹ XP_038952761

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	57,228,033 - 57,253,046 (-)	NCBI
mRatBN7.2	18	54,957,668 - 54,982,757 (-)	NCBI

RefSeq Acc Id:

XM_039096835 ⟹ XP_038952763

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	57,228,033 - 57,240,887 (-)	NCBI
mRatBN7.2	18	54,957,668 - 54,971,230 (-)	NCBI

RefSeq Acc Id:

XM_063277355 ⟹ XP_063133425

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	57,228,033 - 57,253,846 (-)	NCBI

RefSeq Acc Id:

XR_010059572

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	57,219,473 - 57,271,074 (-)	NCBI

RefSeq Acc Id:

XR_010059573

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	57,205,621 - 57,271,074 (-)	NCBI

RefSeq Acc Id:

XR_010059574

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	57,230,880 - 57,271,074 (-)	NCBI

RefSeq Acc Id:

XR_010059575

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	57,205,621 - 57,253,698 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001094444	(Get FASTA)	NCBI Sequence Viewer
	XP_006254871	(Get FASTA)	NCBI Sequence Viewer
	XP_006254873	(Get FASTA)	NCBI Sequence Viewer
	XP_038952756	(Get FASTA)	NCBI Sequence Viewer
	XP_038952760	(Get FASTA)	NCBI Sequence Viewer
	XP_038952761	(Get FASTA)	NCBI Sequence Viewer
	XP_038952763	(Get FASTA)	NCBI Sequence Viewer
	XP_063133425	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	A1IGU3	(Get FASTA)	NCBI Sequence Viewer
	BAF43708	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000037964

RefSeq Acc Id:

NP_001094444 ⟸ NM_001100974

- UniProtKB:

A1IGU3 (UniProtKB/Swiss-Prot), F1LQ74 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MADFETDEASSKSESPEQEGQGSEDKSLLHQRLAIRELIDTEVSYLHTLRLCTSDIRGHLQQLP
PGDLDILFSNIDDIIQVSSRFLHGLQETACKEEKQAHLIGNLFLEFQEELEQVYKVYCANYDQA
LLLVKAYQKEPELQKEIQGIIEAAVPQAGPSGLSFLLVIPLQRITKYPLLLQKILENTPADASA
HPVLQRATSALQDVNSNINEYKMRKEVALKYTKVEQLSLRERLARINTHTLSKKTTRLSQLLKQ
EAGLVPRTEDKEFDDLEERFQWVSLCVTELKSNVAAYMDNLEAFLCFRPHERNLDIPGGAAEQY
CSLARDLQLQAFLQFKQRLTGLVWQPLCSLARALVGPQNLIKKRLDKLLDFERVEEKLLDVGSV
TYEEEAARHTYQALNSLIVAELPQFNHLVMQWLGQILRTFVVLQRDLADQVLRRAESSMALLPH
RHVSEPDFQKLLEDTLGQSSSQLRHFRESFEKVLPPSTSQPLLPGSEHQMQSLLTRYGPGKIYQ
VTSNINGTGTLDLTLPRGQIVALLQNKDTKGNNSRWLVDTGGHRGYVPAGKLQLYHPINPSEKE
PRRQTGMPEDYWLPTPEPTQPSVPTVPTMSQVVAVYPFVARSTHELSLQAGQPVTILEAQDKKG
NPEWSLVEANGQRGYVPSNFLARTPSPTPRGWNLPS

hide sequence

RefSeq Acc Id:	XP_006254873 ⟸ XM_006254811
- Peptide Label:	isoform X1
- UniProtKB:	A1IGU3 (UniProtKB/Swiss-Prot), F1LQ74 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADFETDEASSKSESPEQEGQGSEDKSLLHQRLAIRELIDTEVSYLHTLRLCTSDIRGHLQQLP PGDLDILFSNIDDIIQVSSRFLHGLQETACKEEKQAHLIGNLFLEFQEELEQVYKVYCANYDQA LLLVKAYQKEPELQKEIQGIIEAAVPQAGPSGLSFLLVIPLQRITKYPLLLQKILENTPADASA HPVLQRATSALQDVNSNINEYKMRKEVALKYTKVEQLSLRERLARINTHTLSKKTTRLSQLLKQ EAGLVPRTEDKEFDDLEERFQWVSLCVTELKSNVAAYMDNLEAFLCFRPHERNLDIPGGAAEQY CSLARDLQLQAFLQFKQRLTGLVWQPLCSLARALVGPQNLIKKRLDKLLDFERVEEKLLDVGSV TYEEEAARHTYQALNSLIVAELPQFNHLVMQWLGQILRTFVVLQRDLADQVLRRAESSMALLPH RHVSEPDFQKLLEDTLGQSSSQLRHFRESFEKVLPPSTSQPLLPGSEHQMQSLLTRYGPGKIYQ VTSNINGTGTLDLTLPRGQIVALLQNKDTKGNNSRWLVDTGGHRGYVPAGKLQLYHPINPSEKE PRRQTGMPEDYWLPTPEPTQPSVPTVPTMSQVVAVYPFVARSTHELSLQAGQPVTILEAQDKKG NPEWSLVEANGQRGYVPSNFLARTPSPTPWGWNLPS hide sequence

RefSeq Acc Id:	XP_006254871 ⟸ XM_006254809
- Peptide Label:	isoform X1
- UniProtKB:	A1IGU3 (UniProtKB/Swiss-Prot), F1LQ74 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADFETDEASSKSESPEQEGQGSEDKSLLHQRLAIRELIDTEVSYLHTLRLCTSDIRGHLQQLP PGDLDILFSNIDDIIQVSSRFLHGLQETACKEEKQAHLIGNLFLEFQEELEQVYKVYCANYDQA LLLVKAYQKEPELQKEIQGIIEAAVPQAGPSGLSFLLVIPLQRITKYPLLLQKILENTPADASA HPVLQRATSALQDVNSNINEYKMRKEVALKYTKVEQLSLRERLARINTHTLSKKTTRLSQLLKQ EAGLVPRTEDKEFDDLEERFQWVSLCVTELKSNVAAYMDNLEAFLCFRPHERNLDIPGGAAEQY CSLARDLQLQAFLQFKQRLTGLVWQPLCSLARALVGPQNLIKKRLDKLLDFERVEEKLLDVGSV TYEEEAARHTYQALNSLIVAELPQFNHLVMQWLGQILRTFVVLQRDLADQVLRRAESSMALLPH RHVSEPDFQKLLEDTLGQSSSQLRHFRESFEKVLPPSTSQPLLPGSEHQMQSLLTRYGPGKIYQ VTSNINGTGTLDLTLPRGQIVALLQNKDTKGNNSRWLVDTGGHRGYVPAGKLQLYHPINPSEKE PRRQTGMPEDYWLPTPEPTQPSVPTVPTMSQVVAVYPFVARSTHELSLQAGQPVTILEAQDKKG NPEWSLVEANGQRGYVPSNFLARTPSPTPWGWNLPS hide sequence

Ensembl Acc Id:

ENSRNOP00000069658 ⟸ ENSRNOT00000087188

Ensembl Acc Id:

ENSRNOP00000037964 ⟸ ENSRNOT00000032189

RefSeq Acc Id:	XP_038952756 ⟸ XM_039096828
- Peptide Label:	isoform X1
- UniProtKB:	A1IGU3 (UniProtKB/Swiss-Prot), F1LQ74 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038952760 ⟸ XM_039096832
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038952761 ⟸ XM_039096833
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038952763 ⟸ XM_039096835
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063133425 ⟸ XM_063277355
- Peptide Label:	isoform X2

Protein Domains

BAR DH SH3

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A1IGU3-F1-model_v2	AlphaFold	A1IGU3	1-676	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700819

Promoter ID:

EPDNEW_R11340

Type:

initiation region

Name:

Arhgef37_1

Description:

Rho guanine nucleotide exchange factor 37

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	18	56,870,802 - 56,870,862	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1560471	AgrOrtholog
BioCyc Gene	G2FUF-7325	BioCyc
Ensembl Genes	ENSRNOG00000025502	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000032189	ENTREZGENE
Gene3D-CATH	1.20.1270.60	UniProtKB/Swiss-Prot
	1.20.900.10	UniProtKB/Swiss-Prot
	SH3 Domains	UniProtKB/Swiss-Prot
InterPro	AH/BAR_dom_sf	UniProtKB/Swiss-Prot
	ARHGEF37_SH3_2	UniProtKB/Swiss-Prot
	ARHGEF37_SH3_C1	UniProtKB/Swiss-Prot
	BAR_dom	UniProtKB/Swiss-Prot
	DBL_dom_sf	UniProtKB/Swiss-Prot
	DH-domain	UniProtKB/Swiss-Prot
	Dynamin-Rho_GEF	UniProtKB/Swiss-Prot
	SH3-like_dom_sf	UniProtKB/Swiss-Prot
	SH3_domain	UniProtKB/Swiss-Prot
KEGG Report	rno:307398	UniProtKB/Swiss-Prot
NCBI Gene	307398	ENTREZGENE
PANTHER	NUCLEAR FUSION PROTEIN FUS2	UniProtKB/Swiss-Prot
	RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 37	UniProtKB/Swiss-Prot
Pfam	RhoGEF	UniProtKB/Swiss-Prot
	SH3_2	UniProtKB/Swiss-Prot
	SH3_9	UniProtKB/Swiss-Prot
PhenoGen	Arhgef37	PhenoGen
PROSITE	BAR	UniProtKB/Swiss-Prot
	DH_2	UniProtKB/Swiss-Prot
	SH3	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000025502	RatGTEx
SMART	BAR	UniProtKB/Swiss-Prot
	RhoGEF	UniProtKB/Swiss-Prot
	SH3	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF103657	UniProtKB/Swiss-Prot
	SSF48065	UniProtKB/Swiss-Prot
	SSF50044	UniProtKB/Swiss-Prot
UniProt	A1IGU3	ENTREZGENE, UniProtKB/Swiss-Prot
	F1LQ74	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-11-19	Arhgef37	Rho guanine nucleotide exchange factor 37	Arhgef37	Rho guanine nucleotide exchange factor (GEF) 37	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2011-05-25	Arhgef37	Rho guanine nucleotide exchange factor (GEF) 37	RGD1560471	similar to hypothetical protein 4933429F08	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1560471	similar to hypothetical protein 4933429F08	RGD1560471_predicted	similar to hypothetical protein 4933429F08 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1560471_predicted	similar to hypothetical protein 4933429F08 (predicted)	LOC307398	similar to hypothetical protein 4933429F08	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC307398	similar to hypothetical protein 4933429F08			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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