Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Pigg | Rat | Mental Retardation, Autosomal Recessive 53 | | ISO | PIGG (Homo sapiens) | 7240710 | | OMIM | | |
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Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Pigg | Rat | Mental Retardation, Autosomal Recessive 53 | | ISO | PIGG (Homo sapiens) | 7240710 | | OMIM | | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
3. | GOA pipeline | RGD automated data pipeline |
4. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
5. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
Pigg (Rattus norvegicus - Norway rat) |
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PIGG (Homo sapiens - human) |
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Pigg (Mus musculus - house mouse) |
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Pigg (Chinchilla lanigera - long-tailed chinchilla) |
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PIGG (Pan paniscus - bonobo/pygmy chimpanzee) |
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PIGG (Canis lupus familiaris - dog) |
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Pigg (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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PIGG (Sus scrofa - pig) |
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PIGG (Chlorocebus sabaeus - green monkey) |
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Pigg (Heterocephalus glaber - naked mole-rat) |
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Variants in Pigg
125 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
AI145020 |
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AI235602 |
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BM389617 |
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alimentary part of gastrointestinal system
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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nervous system
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renal system
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reproductive system
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respiratory system
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13 | 12 | 62 | 67 | 59 | 35 | 12 | 35 | 12 | 116 | 48 | 38 | 20 | 44 | 24 |
RefSeq Transcripts | NM_001427662 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_002728071 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250514 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250515 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250516 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250517 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250590 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250591 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250592 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250593 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008769955 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008769956 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039092608 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063272800 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_005493074 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC103314 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
CH474079 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000014 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000072386 ⟹ ENSRNOP00000067732 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000075415 ⟹ ENSRNOP00000066161 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001427662 ⟹ NP_001414591 | ||||||||
RefSeq Status: | VALIDATED | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_006250514 ⟹ XP_006250576 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250515 ⟹ XP_006250577 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250516 ⟹ XP_006250578 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250517 ⟹ XP_006250579 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039092608 ⟹ XP_038948536 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_063272800 ⟹ XP_063128870 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_005493074 | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
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Protein RefSeqs | NP_001414591 | (Get FASTA) | NCBI Sequence Viewer |
XP_006250576 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250577 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250578 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250579 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038948536 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063128870 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | EDL84002 | (Get FASTA) | NCBI Sequence Viewer |
Ensembl Protein | ENSRNOP00000066161.2 | ||
ENSRNOP00000067732.3 |
Ensembl Acc Id: | ENSRNOP00000067732 ⟸ ENSRNOT00000072386 |
Ensembl Acc Id: | ENSRNOP00000066161 ⟸ ENSRNOT00000075415 |
RefSeq Acc Id: | XP_006250579 ⟸ XM_006250517 |
- Peptide Label: | isoform X4 |
- UniProtKB: | A6KPG3 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250576 ⟸ XM_006250514 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A6KPG3 (UniProtKB/TrEMBL), M0RDM7 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250577 ⟸ XM_006250515 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A6KPG3 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_038948536 ⟸ XM_039092608 |
- Peptide Label: | isoform X6 |
RefSeq Acc Id: | XP_006250578 ⟸ XM_006250516 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A6KPG3 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001414591 ⟸ NM_001427662 |
- UniProtKB: | M0R9J2 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_063128870 ⟸ XM_063272800 |
- Peptide Label: | isoform X5 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-M0RDM7-F1-model_v2 | AlphaFold | M0RDM7 | 1-986 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
Database | Acc Id | Source(s) |
AGR Gene | RGD:1560335 | AgrOrtholog |
Ensembl Genes | ENSRNOG00000049895 | Ensembl |
ENSRNOG00000050374 | Ensembl | |
ENSRNOG00000071170 | Ensembl, UniProtKB/TrEMBL | |
Ensembl Transcript | ENSRNOT00000072386.3 | UniProtKB/TrEMBL |
ENSRNOT00000075415.3 | UniProtKB/TrEMBL | |
Gene3D-CATH | 3.40.720.10 | UniProtKB/TrEMBL |
InterPro | Alkaline_phosphatase_core | UniProtKB/TrEMBL |
Phosphodiest/P_Trfase | UniProtKB/TrEMBL | |
PIG-G_N | UniProtKB/TrEMBL | |
PIGG/GPI7 | UniProtKB/TrEMBL | |
PIGG/GPI7_C | UniProtKB/TrEMBL | |
KEGG Report | rno:100910143 | UniProtKB/TrEMBL |
NCBI Gene | Pigg | ENTREZGENE |
PANTHER | GPI ETHANOLAMINE PHOSPHATE TRANSFERASE 2 | UniProtKB/TrEMBL |
PTHR23072 | UniProtKB/TrEMBL | |
Pfam | Phosphodiest | UniProtKB/TrEMBL |
PIGO_PIGG | UniProtKB/TrEMBL | |
PhenoGen | Pigg | PhenoGen |
RatGTEx | ENSRNOG00000049895 | RatGTEx |
ENSRNOG00000050374 | RatGTEx | |
ENSRNOG00000071170 | RatGTEx | |
Superfamily-SCOP | SSF53649 | UniProtKB/TrEMBL |
UniProt | A6KPG3 | ENTREZGENE, UniProtKB/TrEMBL |
M0R9J2 | ENTREZGENE, UniProtKB/TrEMBL | |
M0RDM7 | ENTREZGENE, UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2021-03-09 | Pigg | phosphatidylinositol glycan anchor biosynthesis, class G | LOC100910143 | GPI ethanolamine phosphate transferase 2-like | Data merged from RGD:6499629 | 737654 | PROVISIONAL |
2012-07-05 | LOC100910143 | GPI ethanolamine phosphate transferase 2-like | Symbol and Name status set to provisional | 70820 | PROVISIONAL | ||
2008-02-28 | Pigg | phosphatidylinositol glycan anchor biosynthesis, class G | RGD1560335_predicted | similar to GPI7 (predicted) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2006-03-07 | RGD1560335_predicted | similar to GPI7 (predicted) | LOC305626 | similar to GPI7 | Symbol and Name status set to approved | 1299863 | APPROVED |
2006-02-09 | LOC305626 | similar to GPI7 | Symbol and Name status set to provisional | 70820 | PROVISIONAL |