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Gene: Pigg (phosphatidylinositol glycan anchor biosynthesis, class G) Rattus norvegicus

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Symbol:

Pigg

Name:

phosphatidylinositol glycan anchor biosynthesis, class G

RGD ID:

1560335

Description:

Predicted to enable CP2 mannose-ethanolamine phosphotransferase activity. Predicted to be involved in GPI anchor biosynthetic process. Predicted to be located in endoplasmic reticulum. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human PIGG (phosphatidylinositol glycan anchor biosynthesis class G (EMM blood group)); PARTICIPATES IN glycosylphosphatidylinositol anchor biosynthetic pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; endosulfan.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

GPI ethanolamine phosphate transferase 2; GPI ethanolamine phosphate transferase 2-like; LOC100910143; LOC305626; RGD1560335; similar to GPI7

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	1,549,891 - 1,578,174 (-)	NCBI		GRCr8
mRatBN7.2	14	1,404,911 - 1,433,199 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	1,406,798 - 1,433,187 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	14	1,567,713 - 1,596,004 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	2,410,342 - 2,438,592 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	14	1,567,723 - 1,595,972 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	2,409,267 - 2,438,716 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	1,954,300 - 1,980,867 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	14	1,426,753 - 1,455,040 (-)	NCBI		Celera
Cytogenetic Map	14	p22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pigg	Rat	cherubism		ISO	PIGG (Homo sapiens)	8554872	ClinVar Annotator: match by term: Fibrous dysplasia of jaw	ClinVar	PMID:28492532
Pigg	Rat	epilepsy		ISO	PIGG (Homo sapiens)	8554872	ClinVar Annotator: match by term: Seizure	ClinVar	PMID:25741868
Pigg	Rat	genetic disease		ISO	PIGG (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:25741868 more ...
Pigg	Rat	hyperphosphatasia with impaired intellectual development syndrome		ISO	PIGG (Homo sapiens)	8554872	ClinVar Annotator: match by term: MABRY SYNDROME	ClinVar	PMID:25741868 more ...
Pigg	Rat	hyperphosphatasia with impaired intellectual development syndrome 1		ISO	PIGG (Homo sapiens)	8554872	ClinVar Annotator: match by term: GLYCOSYLPHOSPHATIDYLINOSITOL BIOSYNTHESIS DEFECT 2	ClinVar	PMID:25741868 more ...
Pigg	Rat	Mental Retardation, Autosomal Recessive 53		ISO	PIGG (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:16199547 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pigg	Rat	Mental Retardation, Autosomal Recessive 53		ISO	PIGG (Homo sapiens)	7240710		OMIM

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pigg	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of PIGG mRNA	CTD	PMID:33387578
Pigg	Rat	3-isobutyl-1-methyl-7H-xanthine	multiple interactions	ISO	PIGG (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of PIGG mRNA	CTD	PMID:28628672
Pigg	Rat	4,4'-sulfonyldiphenol	decreases expression	ISO	Pigg (Mus musculus)	6480464	bisphenol S results in decreased expression of PIGG mRNA	CTD	PMID:39298647
Pigg	Rat	4,4'-sulfonyldiphenol	multiple interactions	ISO	PIGG (Homo sapiens)	6480464	[bisphenol S co-treated with Fulvestrant] results in decreased methylation of PIGG gene	CTD	PMID:31601247
Pigg	Rat	4,4'-sulfonyldiphenol	decreases methylation	ISO	PIGG (Homo sapiens)	6480464	bisphenol S results in decreased methylation of PIGG gene	CTD	PMID:31601247
Pigg	Rat	all-trans-retinoic acid	increases expression	ISO	PIGG (Homo sapiens)	6480464	Tretinoin results in increased expression of PIGG mRNA	CTD	PMID:33167477
Pigg	Rat	aristolochic acid A	increases expression	ISO	PIGG (Homo sapiens)	6480464	aristolochic acid I results in increased expression of PIGG mRNA	CTD	PMID:33212167
Pigg	Rat	arsane	affects methylation	ISO	PIGG (Homo sapiens)	6480464	Arsenic affects the methylation of PIGG gene	CTD	PMID:25304211
Pigg	Rat	arsenic atom	affects methylation	ISO	PIGG (Homo sapiens)	6480464	Arsenic affects the methylation of PIGG gene	CTD	PMID:25304211
Pigg	Rat	beta-lapachone	decreases expression	ISO	PIGG (Homo sapiens)	6480464	beta-lapachone results in decreased expression of PIGG mRNA	CTD	PMID:38218311
Pigg	Rat	beta-lapachone	increases expression	ISO	PIGG (Homo sapiens)	6480464	beta-lapachone results in increased expression of PIGG mRNA	CTD	PMID:38218311
Pigg	Rat	bisphenol A	affects expression	EXP		6480464	bisphenol A affects the expression of PIGG mRNA	CTD	PMID:25181051
Pigg	Rat	bisphenol F	multiple interactions	ISO	PIGG (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of PIGG mRNA	CTD	PMID:28628672
Pigg	Rat	bisphenol F	increases expression	ISO	Pigg (Mus musculus)	6480464	bisphenol F results in increased expression of PIGG mRNA	CTD	PMID:38685157
Pigg	Rat	caffeine	increases phosphorylation	ISO	PIGG (Homo sapiens)	6480464	Caffeine results in increased phosphorylation of PIGG protein	CTD	PMID:35688186
Pigg	Rat	carbamazepine	affects expression	ISO	PIGG (Homo sapiens)	6480464	Carbamazepine affects the expression of PIGG mRNA	CTD	PMID:25979313
Pigg	Rat	CGP 52608	multiple interactions	ISO	PIGG (Homo sapiens)	6480464	CGP 52608 promotes the reaction [RORA protein binds to PIGG gene]	CTD	PMID:28238834
Pigg	Rat	dexamethasone	multiple interactions	ISO	PIGG (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of PIGG mRNA	CTD	PMID:28628672
Pigg	Rat	Dibutyl phosphate	affects expression	ISO	PIGG (Homo sapiens)	6480464	di-n-butylphosphoric acid affects the expression of PIGG mRNA	CTD	PMID:37042841
Pigg	Rat	elemental selenium	decreases expression	ISO	PIGG (Homo sapiens)	6480464	Selenium results in decreased expression of PIGG mRNA	CTD	PMID:19244175
Pigg	Rat	endosulfan	decreases expression	EXP		6480464	Endosulfan results in decreased expression of PIGG mRNA	CTD	PMID:29391264
Pigg	Rat	FR900359	increases phosphorylation	ISO	PIGG (Homo sapiens)	6480464	FR900359 results in increased phosphorylation of PIGG protein	CTD	PMID:37730182
Pigg	Rat	fulvestrant	multiple interactions	ISO	PIGG (Homo sapiens)	6480464	[bisphenol S co-treated with Fulvestrant] results in decreased methylation of PIGG gene	CTD	PMID:31601247
Pigg	Rat	indometacin	multiple interactions	ISO	PIGG (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of PIGG mRNA	CTD	PMID:28628672
Pigg	Rat	ivermectin	decreases expression	ISO	PIGG (Homo sapiens)	6480464	Ivermectin results in decreased expression of PIGG protein	CTD	PMID:32959892
Pigg	Rat	methyl methanesulfonate	increases expression	ISO	PIGG (Homo sapiens)	6480464	Methyl Methanesulfonate results in increased expression of PIGG mRNA	CTD	PMID:23649840
Pigg	Rat	paracetamol	increases expression	EXP		6480464	Acetaminophen results in increased expression of PIGG mRNA	CTD	PMID:33387578
Pigg	Rat	perfluorooctane-1-sulfonic acid	multiple interactions	ISO	Pigg (Mus musculus)	6480464	[perfluorooctane sulfonic acid co-treated with Pectins] results in decreased expression of PIGG mRNA	CTD	PMID:36331819
Pigg	Rat	selenium atom	decreases expression	ISO	PIGG (Homo sapiens)	6480464	Selenium results in decreased expression of PIGG mRNA	CTD	PMID:19244175
Pigg	Rat	sodium arsenite	decreases expression	ISO	PIGG (Homo sapiens)	6480464	sodium arsenite results in decreased expression of PIGG mRNA	CTD	PMID:38568856
Pigg	Rat	sodium arsenite	increases expression	ISO	Pigg (Mus musculus)	6480464	sodium arsenite results in increased expression of PIGG mRNA	CTD	PMID:36209798
Pigg	Rat	titanium dioxide	decreases expression	ISO	Pigg (Mus musculus)	6480464	titanium dioxide results in decreased expression of PIGG mRNA	CTD	PMID:29264374 and PMID:35295148
Pigg	Rat	titanium dioxide	decreases methylation	ISO	Pigg (Mus musculus)	6480464	titanium dioxide results in decreased methylation of PIGG promoter	CTD	PMID:35295148
Pigg	Rat	urethane	increases expression	ISO	PIGG (Homo sapiens)	6480464	Urethane results in increased expression of PIGG mRNA	CTD	PMID:28818685
Pigg	Rat	valproic acid	increases methylation	ISO	PIGG (Homo sapiens)	6480464	Valproic Acid results in increased methylation of PIGG gene	CTD	PMID:29154799
Pigg	Rat	valproic acid	affects expression	ISO	PIGG (Homo sapiens)	6480464	Valproic Acid affects the expression of PIGG mRNA	CTD	PMID:25979313
Pigg	Rat	vitamin E	decreases expression	ISO	PIGG (Homo sapiens)	6480464	Vitamin E results in decreased expression of PIGG mRNA	CTD	PMID:19244175

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pigg	Rat	GPI anchor biosynthetic process	acts_upstream_of_or_within	ISO	PIGG (Homo sapiens)	1624291	PMID:15632136	RGD	PMID:15632136
Pigg	Rat	GPI anchor biosynthetic process	involved_in	IEA	UniProtKB-KW:KW-0337	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pigg	Rat	GPI anchor biosynthetic process	involved_in	IEA	InterPro:IPR037674 and InterPro:IPR039527	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Pigg	Rat	GPI anchor biosynthetic process	involved_in	IBA	PANTHER:PTN000552977 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Pigg	Rat	GPI anchor biosynthetic process	involved_in	IEA	UniPathway:UPA00196	1600115	GO_REF:0000041	UniProt	GO_REF:0000041

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pigg	Rat	endoplasmic reticulum	located_in	IEA	UniProtKB-KW:KW-0256	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pigg	Rat	endoplasmic reticulum	located_in	ISO	PIGG (Homo sapiens)	1624291	PMID:15632136	RGD	PMID:15632136
Pigg	Rat	endoplasmic reticulum membrane	located_in	IEA	UniProtKB-SubCell:SL-0097	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Pigg	Rat	endoplasmic reticulum membrane	is_active_in	IBA	PANTHER:PTN000552977 and SGD:S000003598	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Pigg	Rat	membrane	located_in	IEA	UniProtKB-KW:KW-0472	1600115	GO_REF:0000043	UniProt	GO_REF:0000043

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pigg	Rat	CP2 mannose-ethanolamine phosphotransferase activity	enables	ISO	PIGG (Homo sapiens)	1624291	PMID:15632136	RGD	PMID:15632136
Pigg	Rat	CP2 mannose-ethanolamine phosphotransferase activity	enables	IBA	PANTHER:PTN000552977 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Pigg	Rat	mannose-ethanolamine phosphotransferase activity	enables	IEA	InterPro:IPR037674 and InterPro:IPR039527	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Pigg	Rat	metal ion binding	enables	IEA	UniProtKB-KW:KW-0479	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pigg	Rat	transferase activity	enables	ISO	PIGG (Homo sapiens)	1624291	PMID:34113002	RGD	PMID:34113002
Pigg	Rat	transferase activity	enables	IEA	UniProtKB-KW:KW-0808	1600115	GO_REF:0000043	UniProt	GO_REF:0000043

Imported Annotations - KEGG (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pigg	Rat	glycosylphosphatidylinositol anchor biosynthetic pathway		IEA		6907045		KEGG	rno:00563

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:15632090	PMID:15632136	PMID:19946888

Pigg
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	1,549,891 - 1,578,174 (-)	NCBI		GRCr8
mRatBN7.2	14	1,404,911 - 1,433,199 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	1,406,798 - 1,433,187 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	14	1,567,713 - 1,596,004 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	2,410,342 - 2,438,592 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	14	1,567,723 - 1,595,972 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	2,409,267 - 2,438,716 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	1,954,300 - 1,980,867 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	14	1,426,753 - 1,455,040 (-)	NCBI		Celera
Cytogenetic Map	14	p22	NCBI

PIGG
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	499,210 - 540,200 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	499,210 - 540,200 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	492,999 - 533,989 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	483,010 - 523,312 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	4	434,691 - 474,916 (+)	NCBI		Celera
Cytogenetic Map	4	p16.3	NCBI
HuRef	4	464,465 - 504,599 (+)	NCBI		HuRef
CHM1_1	4	492,782 - 533,119 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	4	492,591 - 533,582 (+)	NCBI		T2T-CHM13v2.0

Pigg
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	108,460,679 - 108,497,225 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	108,460,475 - 108,497,221 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	108,312,813 - 108,349,359 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	108,312,609 - 108,349,355 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	108,741,944 - 108,777,798 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	108,553,227 - 108,589,081 (+)	NCBI		MGSCv36	mm8
Celera	5	105,432,736 - 105,468,607 (+)	NCBI		Celera
Cytogenetic Map	5	F	NCBI
cM Map	5	52.9	NCBI

Pigg
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955514	120,287 - 151,827 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955514	119,804 - 152,603 (+)	NCBI	ChiLan1.0	ChiLan1.0

PIGG
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	754,796 - 795,367 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	725,109 - 765,864 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	499,795 - 540,453 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	521,807 - 561,790 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	521,807 - 561,790 (+)	Ensembl	panpan1.1		panPan2

PIGG
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	91,811,681 - 91,849,530 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	91,812,875 - 91,849,446 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	94,276,480 - 94,314,342 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	92,810,466 - 92,848,390 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	92,808,140 - 92,848,371 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	91,982,042 - 92,019,851 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	92,037,225 - 92,075,030 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	92,419,417 - 92,457,240 (-)	NCBI		UU_Cfam_GSD_1.0

Pigg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405285	68,819,639 - 68,861,625 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936477	22,523,729 - 22,563,708 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936477	22,524,227 - 22,563,536 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PIGG
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	20,646 - 43,330 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	21,437 - 44,415 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

PIGG
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	27	48,243,098 - 48,286,642 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	27	48,241,534 - 48,286,607 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666051	4,651,606 - 4,703,238 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pigg
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624755	26,505,042 - 26,538,382 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624755	26,505,042 - 26,538,392 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Pigg
182 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	141
Count of miRNA genes:	96
Interacting mature miRNAs:	105
Transcripts:	ENSRNOT00000072386, ENSRNOT00000075415
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7411573	Bw139	Body weight QTL 139	4.7	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	14	1	40068101	Rat
9589814	Gluco67	Glucose level QTL 67	4.54	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	14	1	40068101	Rat
634352	Apr6	Acute phase response QTL 6	3.7		blood interleukin-6 amount (VT:0008595)	plasma interleukin-6 level (CMO:0001927)	14	1	41415516	Rat
71115	Niddm15	Non-insulin dependent diabetes mellitus QTL 15	4.8		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	14	1	11334906	Rat
71117	Niddm17	Non-insulin dependent diabetes mellitus QTL 17	2.35		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	14	1	17877928	Rat
70204	Niddm20	Non-insulin dependent diabetes mellitus QTL 20	5.1	0.000008	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	14	1	31893212	Rat

AI145020

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	14	1,405,195 - 1,405,380 (+)	MAPPER	mRatBN7.2
Rnor_6.0	14	2,410,624 - 2,410,808	NCBI	Rnor6.0
Rnor_6.0	14	1,567,998 - 1,568,182	NCBI	Rnor6.0
Rnor_5.0	14	1,563,229 - 1,563,413	UniSTS	Rnor5.0
Rnor_5.0	14	2,409,552 - 2,409,736	UniSTS	Rnor5.0
RGSC_v3.4	14	1,952,911 - 1,953,095	UniSTS	RGSC3.4
Celera	14	1,427,038 - 1,427,222	UniSTS
Cytogenetic Map	14	p22	UniSTS

AI235602

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	14	1,425,876 - 1,426,090 (+)	MAPPER	mRatBN7.2
Rnor_6.0	14	2,431,305 - 2,431,518	NCBI	Rnor6.0
Rnor_6.0	14	1,588,679 - 1,588,892	NCBI	Rnor6.0
Rnor_5.0	14	2,430,233 - 2,430,446	UniSTS	Rnor5.0
Rnor_5.0	14	1,583,910 - 1,584,123	UniSTS	Rnor5.0
RGSC_v3.4	14	1,973,592 - 1,973,805	UniSTS	RGSC3.4
Celera	14	1,447,715 - 1,447,928	UniSTS
RH 3.4 Map	14	32.5	UniSTS
Cytogenetic Map	14	p22	UniSTS

BM389617

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	14	1,453,347 - 1,453,531 (+)	MAPPER	mRatBN7.2
Rnor_6.0	14	2,458,776 - 2,458,959	NCBI	Rnor6.0
Rnor_6.0	14	1,616,150 - 1,616,333	NCBI	Rnor6.0
Rnor_5.0	14	2,457,704 - 2,457,887	UniSTS	Rnor5.0
Rnor_5.0	14	1,611,381 - 1,611,564	UniSTS	Rnor5.0
RGSC_v3.4	14	2,001,063 - 2,001,246	UniSTS	RGSC3.4
Celera	14	1,475,179 - 1,475,362	UniSTS
RH 3.4 Map	14	25.9	UniSTS
Cytogenetic Map	14	p22	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
13	12	62	67	59	35	12	35	12	116	48	38	20	44	24


RefSeq Transcripts	NM_001427662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_002728071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250515	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250516	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250517	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250590	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250591	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250592	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769956	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039092608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272800	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005493074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC103314	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474079	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000072386 ⟹ ENSRNOP00000067732

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	14	1,406,798 - 1,433,187 (-)	Ensembl
Rnor_6.0 Ensembl	14	2,410,342 - 2,438,592 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000075415 ⟹ ENSRNOP00000066161

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	14	1,406,798 - 1,433,187 (-)	Ensembl
Rnor_6.0 Ensembl	14	1,567,723 - 1,595,972 (-)	Ensembl

RefSeq Acc Id:

NM_001427662 ⟹ NP_001414591

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,549,891 - 1,578,167 (-)	NCBI

RefSeq Acc Id:

XM_006250514 ⟹ XP_006250576

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,549,891 - 1,578,174 (-)	NCBI
mRatBN7.2	14	1,404,911 - 1,433,199 (-)	NCBI

Sequence:

show sequence

TATTTCCCATGCGCGGGCGCTGGCGAGGCGCGCCGGAAGCTAGATCTTGACAGTCGGGGTGTGTGGGTCCTGGATGCAGGTGTGCGGCCCCCGCTGCTACACTTAATATCCTGCGGTCCCGCCCAGCG
GCTGGGCAGAATGCGGCTGGGCTCCGGGGCCTTCGCTGCCAGCTGCGTAGCGATTGAGGTGATTGGGGTCGCGATATTTATTCGGGGATTCTTCCCAGCTCCTGTGCGTTCCTCTGCCAGACCGGAGC
ATGGTGCAGAGACCCCAGCGCCCGAACCCGTAGCAGGAGTCAGTTCGAACTGGACCAAGCTGCCGCCACCACTCTTCAGTAAAGTGGTTATTATGCTGATAGATGCTTTAAGAGATGATTTTGTGTTT
GGGTCAAAAGGCGTGAAGTATATGCCCTACACAACGTATCTGGTAGAAAAAGGAGCGTCTCATAGTTTCGTGGCTGAGGCAAAGCCACCCACAGTTACTATGCCTCGAATCAAGGCATTGATGACGGG
AAGTCTCCCTGGCTTTGTTGATGTCATCAGGAATCTCAATTCTCCTGTTCTCCTAGAAGACAATGTGATAAGACAGGCAAAGGCTGCTGGGAAAAGAATAATCTTTTATGGAGATGAAACATGGGTTA
AATTATTCCCAAAGCACTTTGTGGAATATGATGGGACAACATCATTCTTTGTGTCAGATTATATAGAGGTGGATAACAATGTCACAAGGCATTTGGACAAAGTATTAAGAAGAGGAGACTGGGATGTG
CTGATCCTTCACTACTTAGGGCTAGATCACATTGGCCACATTTCTGGGCCCAACAGCCCCCTGATTGGTCACAAGCTCAGCGAAATGGACAGTGTGCTCATGAAAATTCATACGTCACTGTTGTCAAA
GGACAGAGAAACTCTCTTACCCAGTCTGCTGGTTCTCTGTGGTGACCATGGAATGTCTGAAACAGGGAGTCATGGGGCCTCTTCCACAGAGGAAGTGAGCACACCTCTACTCCTAATCAGCTCTGCGT
TTGAAAGGAAACCTGGGGATGTTCGACACCCAAAGCACGTCCAGCAGACTGACTTGGCTGCAACACTAGCAATAGGACTCGGTTTGCCAATTCCTAAAGATAATGTAGGAAGCCTCTTATTCCCAGTT
ATAGAGGGAAAACAGATGAGAGAGCAGCTGAGATTTTTACATTTAAACACATTACAGCTTAGCAAACTATTGCAAGAAAACATACCAGCCTATGAAAAAGATCCTGGATTTGAGCAGTTTAAAATGGC
AGAAAGGTTGCATGGAAACTGGGTCAAACTGCACTTGGAAGAAAACCATTCAGACATTCTGCTTGGCTTGGGGACCAAAGTACTCAGGCAGTACCTGGGTGCCCTGAAGACCCTGAGTCAGTCCCTGA
GCACACAAGTGGCTCACTATGACATCTACTCAATGGCAGTGGGGACACTCATGGTTTTGGAGGTTCTCACCCTGTTTCTCCTTAGCACTCCACATGTGCTGTGCAGAAAGGCTGAACTGGATGTTCCC
CTGTTGTCTCCTGTGTTTTCTCTGCTCTTTTACTTGATATTTTTGGTTCTTTCGGCCATTCATGTCCTGGTGTGCACCTCATCTGAGAGCTCGTGCTACCTCTGTAACCTCCCGTGGCTGGCAGCAGG
GGCTGTGATGGTACTTGTTTCTGCACTTTTCTGTGCAATTTTGTCCGCTCTTATCAGGATGGTCACCGACGGCACTCTGCTGAGGAAGAATGCAACTGTTGCCAGCTCAGGGTGGTCAGAGGTGAACC
TCCTTCTTCTTCTGGGCACAGTGGGCCATGTTCTGAGCCTGGGAGCCAGCAGCTTCGTGGAGGAAGAGCACCAGACGTGGTATTTCCTTATTAATACTCTGTGCCTGGCTCTGAGCCAGGAAACCTGT
AGGAGTTACTTCCTGGGAGATGACTGTGAACCTCAGCATCACTTCCAGGTGGAACAAAAATGTGTGAATGTCCTTGCCTGTACCCTGCAGGACAGTACAAGCTGCAGTACCCCTGAGTCTGAGTCTGA
CACAGCAGGTAAACGGGCCTCCCTGTTGGAAGCACACAGAAGCTGCAAATGGTGGACAGTGCTGGCAAGTCCGTGGCTGGTGCTGATCTGCTGCCGGCTACTGCGCTCCTTGAACCAGACAGGGGTGC
AGGGAGCCCATCGCCCTGACTTTAGTCACTGGCTTACCAGCTCTGACCACAAAGTCCATCTCTCAGGCCTGGCTGCCCTCTCCCTGGTTGTGATCTTCATTTTAGTTCAGAAGGGCTGCTCTCTTGTA
TCCAAGGTGGCCCTAGCACTGGGGCTGCTGGGTGTCTTCTGCTACAGAGCAGCCATTGGGATTGTGCTGTTCCCGTGGCAACCAGACAACAAAGGCATCTCAAATAGAGAAGTTGGTTTGCAATCTGA
CAGCATCCAGGAGATGTGCTCGCGATGTGCGCCTCCTAGGACCACGTGCATCATCCTCAAGTGGAGGCTTCAAGGAAAGGGCAATTCCAACAACATTGCTACCATCGACATTTCAGCAGGCTGTGTGG
GCTTAGAGACCTACATGGAAGTCCCGGCCACATTCCTCACAGTGTTTGGAACATATGTAGGGCCTGTGCTTTGGGCCAGCCACCTTGTGTACTTCCTGAGCTCAGAAGGAAACAATGGTTCAGCACTG
AGCCGCGCTTGCTTCTGCTATGCACTGATTTGCTCTGTTCCAGTTGCCACGTACATTGTTCTGGTGACGTCTCTGCGCTACCACTTATTCATATGGAGTGTGTTTTCCCCAAAGCTGCTCTATGAAGG
GATGCATCTGCTCATCACGGCTGCCATTTGTGCAGTGTTCACGGCCACAAACCAGACTCGCCACTCGAGGGCTTAGGTGGGGACAGATATTTGAAGCTGATCAGTAACTGTTTGCAGTATGGATTTGA
GTATCGAACTGCTTACATGCAAGATTATTCTGTGGTGGAAAGAAAAAGGATGGGAAGCCTAGGGAATGAGTGGATAACTTAATTTTACTTAGATTTAAATTAAAACCAGATTGATAAAAGACTCCCTT
TAAGATTTCCCCATTGATAATCACTTTCTCAATCCTCTCTGAGTGAGCTGTGACTGCTGTGCTTAAATGGATGGAAGAAAAGCTCTGGGCTTTATCATTGCGTTTATCTCGGAGAGCCCAGGGGCCCT
GTAGGAGGAGCTGCGGCTGCTACAGGACTACATCAAAGACCTCGCACTCCTAAGAACTCCTAAGATCAGAGTTAGTAGCATTTGAAATGAAAACTAGGTCATTTTAAACATTACTCATTTAAAAAATG
CTCTGTTAGTCGACAAGGTGGAGCACACTTGCATGATGCCATACTCAAGAGGGCAGAACCACGAGCGTCCAGACTGCTTAGACTACATAGGATGACCATGCCTCAACTCCTCCCCACCCCAATAAAAA
CTGCTGCATATTAATATAACAACGTAATTATATTTTTCAAAACAAATATTTAATGAGGAAAATAGTATTTTTTTATGTTTTTACAAATGTCTTAAATGACTCAATTGAAGATAGTTGGAATCTACATT
TGATCTATTGTAATTTATGTCTGAAAAATAAGGAATCCATCTTCACTCAAATCTGTGGTTGGAAAAGTGTGAAGTATCTTAATACCACCTCTTCTCTGTCAGCTTGAATACTGTGCTTTGATACCAAA
ACAAAAATTGGCAGGTAGTATATAGGGTTTCATTGTTGCTGGGACAAGATCTCCCAAGTTTTGATCCTCCCCAGTCTCCCAAGTGTTGGGCTTGCAGGTGTGCGGCCCTGAGCCTGGTTTCAGGGGTT
AGCTCTTCCAAGCTAGTTGGAAAGAAACAGGAGAGATGTAGTCATGTATGCAGGTTAAACTAGTGATCTGGTTAGGGTCTTTTTCGTAGTTTAAACATATTTCAGTCATGTAATTTTAAAGAGGCCTG
TCCTTGAGCCAGTAGAATTGTGTCTATATTACCATGGACTCTGCTGACACAAAACTGATCTGCCAGGCAAGATATGCCCCTAATACAATAATGACATGAACGTCCTGGTGGTAACTAATCATTTTATG
GTTGAATTTGAAACCTCATCTATATCATGCTGTGAACCTGGTCAAGCTCATGGTCAGAGAGGTCCTAGGCTCTAAGAGAAAGCTTACTAGTGTTTTTCACAATGGATATGTTGTCACACTGTCATTGG
AATGTCTGTGTTTGCCACCCACAGATCAGGGCTGCTCTTAACCTTGGTCAGAAAGGCTGACAGAGGTTAATGCAAAGACTGTAGTTCGTCAGTGTGTGGAGAATAATTGACTGTTGAATCTTCCATCC
CAAATGAACCATCTGTCTCTCTATTTCTATCTCTCTCTGTGTCTTTGTTCCTGTTATCTCCCCCCACACCCACCCTCCCAACAAACATACACACCAAAAATCAAAACATTTTAGAAGAAACAGAAAGA
ATGCAAGGGCTGGAGAATGAGGACAGGTGTTGTGAAATTCTGGTTACCTACCTAAGACCTGCACAAAATTTAGGTCCTCGACATTTTAACATAAATAGGGAAAGGGTACTTGGGGTACCAACCCTAGC
TGAAGAGCTATTGTTAGTTAATGGCTGCTGGAGAAGGAGTCATTTTCCTTCAGACATATAGCCACTAATACGTTGCCTGTTACCTAGTCAATATCCACATTCACATCTAAGTGGGCCTAATTAAACTC
TGTCACTAGGGGAAAAGAAGTGAAAGGAGGAGGAAGAAGCGTTCCAGAGGAGGGGTAGAAGAGGAGGATGGGGTAAAAATGGTCAAAATGTATGATATAGATGTACAAAATGATCAAAGATTAAATAC
TATATTTTAAGAGGGTAAGTTATGTTAAGTCTATGTGTATATATGCTATAGCTTGTGAATTTAAAGAGGGAAAGAAAAATCCACAATGTATTTGGTGTCATAAAAATTATAGTTTTATCATCTATTGT
ATTTTCTACAGGAAATAAATAATATGAGTTTTCTGTTGTTTAGACATTTAAATTCCTTAGATACTTCAATAAAAACAAGCCGTATAGCCCCCTCACATTAA

hide sequence

RefSeq Acc Id:

XM_006250515 ⟹ XP_006250577

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,549,891 - 1,578,150 (-)	NCBI
mRatBN7.2	14	1,404,911 - 1,433,192 (-)	NCBI

Sequence:

show sequence

TTCCCATGCGCGGGCGCTGGCGAGGCGCGCCGGAAGCTAGATCTTGACAGTCGGGGTGTGTGGGTCCTGGATGCAGGTGTGCGGCCCCCGCTGCTACACTTAATATCCTGCGGTCCCGCCCAGCGGCT
GGGCAGAATGCGGCTGGGCTCCGGGGCCTTCGCTGCCAGCTGCGTAGCGATTGAGGAGTCAGTTCGAACTGGACCAAGCTGCCGCCACCACTCTTCAGTAAAGTGGTTATTATGCTGATAGATGCTTT
AAGAGATGATTTTGTGTTTGGGTCAAAAGGCGTGAAGTATATGCCCTACACAACGTATCTGGTAGAAAAAGGAGCGTCTCATAGTTTCGTGGCTGAGGCAAAGCCACCCACAGTTACTATGCCTCGAA
TCAAGGCATTGATGACGGGAAGTCTCCCTGGCTTTGTTGATGTCATCAGGAATCTCAATTCTCCTGTTCTCCTAGAAGACAATGTGATAAGACAGGCAAAGGCTGCTGGGAAAAGAATAATCTTTTAT
GGAGATGAAACATGGGTTAAATTATTCCCAAAGCACTTTGTGGAATATGATGGGACAACATCATTCTTTGTGTCAGATTATATAGAGGTGGATAACAATGTCACAAGGCATTTGGACAAAGTATTAAG
AAGAGGAGACTGGGATGTGCTGATCCTTCACTACTTAGGGCTAGATCACATTGGCCACATTTCTGGGCCCAACAGCCCCCTGATTGGTCACAAGCTCAGCGAAATGGACAGTGTGCTCATGAAAATTC
ATACGTCACTGTTGTCAAAGGACAGAGAAACTCTCTTACCCAGTCTGCTGGTTCTCTGTGGTGACCATGGAATGTCTGAAACAGGGAGTCATGGGGCCTCTTCCACAGAGGAAGTGAGCACACCTCTA
CTCCTAATCAGCTCTGCGTTTGAAAGGAAACCTGGGGATGTTCGACACCCAAAGCACGTCCAGCAGACTGACTTGGCTGCAACACTAGCAATAGGACTCGGTTTGCCAATTCCTAAAGATAATGTAGG
AAGCCTCTTATTCCCAGTTATAGAGGGAAAACAGATGAGAGAGCAGCTGAGATTTTTACATTTAAACACATTACAGCTTAGCAAACTATTGCAAGAAAACATACCAGCCTATGAAAAAGATCCTGGAT
TTGAGCAGTTTAAAATGGCAGAAAGGTTGCATGGAAACTGGGTCAAACTGCACTTGGAAGAAAACCATTCAGACATTCTGCTTGGCTTGGGGACCAAAGTACTCAGGCAGTACCTGGGTGCCCTGAAG
ACCCTGAGTCAGTCCCTGAGCACACAAGTGGCTCACTATGACATCTACTCAATGGCAGTGGGGACACTCATGGTTTTGGAGGTTCTCACCCTGTTTCTCCTTAGCACTCCACATGTGCTGTGCAGAAA
GGCTGAACTGGATGTTCCCCTGTTGTCTCCTGTGTTTTCTCTGCTCTTTTACTTGATATTTTTGGTTCTTTCGGCCATTCATGTCCTGGTGTGCACCTCATCTGAGAGCTCGTGCTACCTCTGTAACC
TCCCGTGGCTGGCAGCAGGGGCTGTGATGGTACTTGTTTCTGCACTTTTCTGTGCAATTTTGTCCGCTCTTATCAGGATGGTCACCGACGGCACTCTGCTGAGGAAGAATGCAACTGTTGCCAGCTCA
GGGTGGTCAGAGGTGAACCTCCTTCTTCTTCTGGGCACAGTGGGCCATGTTCTGAGCCTGGGAGCCAGCAGCTTCGTGGAGGAAGAGCACCAGACGTGGTATTTCCTTATTAATACTCTGTGCCTGGC
TCTGAGCCAGGAAACCTGTAGGAGTTACTTCCTGGGAGATGACTGTGAACCTCAGCATCACTTCCAGGTGGAACAAAAATGTGTGAATGTCCTTGCCTGTACCCTGCAGGACAGTACAAGCTGCAGTA
CCCCTGAGTCTGAGTCTGACACAGCAGGTAAACGGGCCTCCCTGTTGGAAGCACACAGAAGCTGCAAATGGTGGACAGTGCTGGCAAGTCCGTGGCTGGTGCTGATCTGCTGCCGGCTACTGCGCTCC
TTGAACCAGACAGGGGTGCAGGGAGCCCATCGCCCTGACTTTAGTCACTGGCTTACCAGCTCTGACCACAAAGTCCATCTCTCAGGCCTGGCTGCCCTCTCCCTGGTTGTGATCTTCATTTTAGTTCA
GAAGGGCTGCTCTCTTGTATCCAAGGTGGCCCTAGCACTGGGGCTGCTGGGTGTCTTCTGCTACAGAGCAGCCATTGGGATTGTGCTGTTCCCGTGGCAACCAGACAACAAAGGCATCTCAAAGGGAA
TTACTGAAGCTCGTTTTGTTTATGTCTTTGTCCTTGGCATTCTGTTCACCGGCACCAAAGATTTACTTAAAGCACAAGTCATTGCAGCAGACTTCAAAACCAAGATTGTAGGCTTGTGGGAGATACAT
AGTGGGCTAGTTCTTCTGGCAGCTCTGCTCTTGAGACCACACAACCTTCCAGTGTTAGCCTTTAGCCTCTTGATTCAGACTGTAATGACTAAGTTCATCTGGAAGCCCCTGAGACATGATGCAGCCGA
GGTCACTGTAATGCATTATTGGTTCGGTCAAGCATTCTTCTATTTCCAGGGCAATTCCAACAACATTGCTACCATCGACATTTCAGCAGGCTGTGTGGGCTTAGAGACCTACATGGAAGTCCCGGCCA
CATTCCTCACAGTGTTTGGAACATATGTAGGGCCTGTGCTTTGGGCCAGCCACCTTGTGTACTTCCTGAGCTCAGAAGGAAACAATGGTTCAGCACTGAGCCGCGCTTGCTTCTGCTATGCACTGATT
TGCTCTGTTCCAGTTGCCACGTACATTGTTCTGGTGACGTCTCTGCGCTACCACTTATTCATATGGAGTGTGTTTTCCCCAAAGCTGCTCTATGAAGGGATGCATCTGCTCATCACGGCTGCCATTTG
TGCAGTGTTCACGGCCACAAACCAGACTCGCCACTCGAGGGCTTAGGTGGGGACAGATATTTGAAGCTGATCAGTAACTGTTTGCAGTATGGATTTGAGTATCGAACTGCTTACATGCAAGATTATTC
TGTGGTGGAAAGAAAAAGGATGGGAAGCCTAGGGAATGAGTGGATAACTTAATTTTACTTAGATTTAAATTAAAACCAGATTGATAAAAGACTCCCTTTAAGATTTCCCCATTGATAATCACTTTCTC
AATCCTCTCTGAGTGAGCTGTGACTGCTGTGCTTAAATGGATGGAAGAAAAGCTCTGGGCTTTATCATTGCGTTTATCTCGGAGAGCCCAGGGGCCCTGTAGGAGGAGCTGCGGCTGCTACAGGACTA
CATCAAAGACCTCGCACTCCTAAGAACTCCTAAGATCAGAGTTAGTAGCATTTGAAATGAAAACTAGGTCATTTTAAACATTACTCATTTAAAAAATGCTCTGTTAGTCGACAAGGTGGAGCACACTT
GCATGATGCCATACTCAAGAGGGCAGAACCACGAGCGTCCAGACTGCTTAGACTACATAGGATGACCATGCCTCAACTCCTCCCCACCCCAATAAAAACTGCTGCATATTAATATAACAACGTAATTA
TATTTTTCAAAACAAATATTTAATGAGGAAAATAGTATTTTTTTATGTTTTTACAAATGTCTTAAATGACTCAATTGAAGATAGTTGGAATCTACATTTGATCTATTGTAATTTATGTCTGAAAAATA
AGGAATCCATCTTCACTCAAATCTGTGGTTGGAAAAGTGTGAAGTATCTTAATACCACCTCTTCTCTGTCAGCTTGAATACTGTGCTTTGATACCAAAACAAAAATTGGCAGGTAGTATATAGGGTTT
CATTGTTGCTGGGACAAGATCTCCCAAGTTTTGATCCTCCCCAGTCTCCCAAGTGTTGGGCTTGCAGGTGTGCGGCCCTGAGCCTGGTTTCAGGGGTTAGCTCTTCCAAGCTAGTTGGAAAGAAACAG
GAGAGATGTAGTCATGTATGCAGGTTAAACTAGTGATCTGGTTAGGGTCTTTTTCGTAGTTTAAACATATTTCAGTCATGTAATTTTAAAGAGGCCTGTCCTTGAGCCAGTAGAATTGTGTCTATATT
ACCATGGACTCTGCTGACACAAAACTGATCTGCCAGGCAAGATATGCCCCTAATACAATAATGACATGAACGTCCTGGTGGTAACTAATCATTTTATGGTTGAATTTGAAACCTCATCTATATCATGC
TGTGAACCTGGTCAAGCTCATGGTCAGAGAGGTCCTAGGCTCTAAGAGAAAGCTTACTAGTGTTTTTCACAATGGATATGTTGTCACACTGTCATTGGAATGTCTGTGTTTGCCACCCACAGATCAGG
GCTGCTCTTAACCTTGGTCAGAAAGGCTGACAGAGGTTAATGCAAAGACTGTAGTTCGTCAGTGTGTGGAGAATAATTGACTGTTGAATCTTCCATCCCAAATGAACCATCTGTCTCTCTATTTCTAT
CTCTCTCTGTGTCTTTGTTCCTGTTATCTCCCCCCACACCCACCCTCCCAACAAACATACACACCAAAAATCAAAACATTTTAGAAGAAACAGAAAGAATGCAAGGGCTGGAGAATGAGGACAGGTGT
TGTGAAATTCTGGTTACCTACCTAAGACCTGCACAAAATTTAGGTCCTCGACATTTTAACATAAATAGGGAAAGGGTACTTGGGGTACCAACCCTAGCTGAAGAGCTATTGTTAGTTAATGGCTGCTG
GAGAAGGAGTCATTTTCCTTCAGACATATAGCCACTAATACGTTGCCTGTTACCTAGTCAATATCCACATTCACATCTAAGTGGGCCTAATTAAACTCTGTCACTAGGGGAAAAGAAGTGAAAGGAGG
AGGAAGAAGCGTTCCAGAGGAGGGGTAGAAGAGGAGGATGGGGTAAAAATGGTCAAAATGTATGATATAGATGTACAAAATGATCAAAGATTAAATACTATATTTTAAGAGGGTAAGTTATGTTAAGT
CTATGTGTATATATGCTATAGCTTGTGAATTTAAAGAGGGAAAGAAAAATCCACAATGTATTTGGTGTCATAAAAATTATAGTTTTATCATCTATTGTATTTTCTACAGGAAATAAATAATATGAGTT
TTCTGTTGTTTAGACATTTAAATTCCTTAGATACTTCAATAAAAACAAGCCGTATAGCCCCCTCACATTAA

hide sequence

RefSeq Acc Id:

XM_006250516 ⟹ XP_006250578

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,556,280 - 1,578,174 (-)	NCBI
mRatBN7.2	14	1,411,314 - 1,433,199 (-)	NCBI

Sequence:

show sequence

TTTCCCATGCGCGGGCGCTGGCGAGGCGCGCCGGAAGCTAGATCTTGACAGTCGGGGTGTGTGGGTCCTGGATGCAGGTGTGCGGCCCCCGCTGCTACACTTAATATCCTGCGGTCCCGCCCAGCGGC
TGGGCAGAATGCGGCTGGGCTCCGGGGCCTTCGCTGCCAGCTGCGTAGCGATTGAGGTGATTGGGGTCGCGATATTTATTCGGGGATTCTTCCCAGCTCCTGTGCGTTCCTCTGCCAGACCGGAGCAT
GGTGCAGAGACCCCAGCGCCCGAACCCGTAGCAGGAGTCAGTTCGAACTGGACCAAGCTGCCGCCACCACTCTTCAGTAAAGTGGTTATTATGCTGATAGATGCTTTAAGAGATGATTTTGTGTTTGG
GTCAAAAGGCGTGAAGTATATGCCCTACACAACGTATCTGGTAGAAAAAGGAGCGTCTCATAGTTTCGTGGCTGAGGCAAAGCCACCCACAGTTACTATGCCTCGAATCAAGGCATTGATGACGGGAA
GTCTCCCTGGCTTTGTTGATGTCATCAGGAATCTCAATTCTCCTGTTCTCCTAGAAGACAATGTGATAAGACAGGCAAAGGCTGCTGGGAAAAGAATAATCTTTTATGGAGATGAAACATGGGTTAAA
TTATTCCCAAAGCACTTTGTGGAATATGATGGGACAACATCATTCTTTGTGTCAGATTATATAGAGGTGGATAACAATGTCACAAGGCATTTGGACAAAGTATTAAGAAGAGGAGACTGGGATGTGCT
GATCCTTCACTACTTAGGGCTAGATCACATTGGCCACATTTCTGGGCCCAACAGCCCCCTGATTGGTCACAAGCTCAGCGAAATGGACAGTGTGCTCATGAAAATTCATACGTCACTGTTGTCAAAGG
ACAGAGAAACTCTCTTACCCAGTCTGCTGGTTCTCTGTGGTGACCATGGAATGTCTGAAACAGGGAGTCATGGGGCCTCTTCCACAGAGGAAGTGAGCACACCTCTACTCCTAATCAGCTCTGCGTTT
GAAAGGAAACCTGGGGATGTTCGACACCCAAAGCACGTCCAGCAGACTGACTTGGCTGCAACACTAGCAATAGGACTCGGTTTGCCAATTCCTAAAGATAATGTAGGAAGCCTCTTATTCCCAGTTAT
AGAGGGAAAACAGATGAGAGAGCAGCTGAGATTTTTACATTTAAACACATTACAGCTTAGCAAACTATTGCAAGAAAACATACCAGCCTATGAAAAAGATCCTGGATTTGAGCAGTTTAAAATGGCAG
AAAGGTTGCATGGAAACTGGGTCAAACTGCACTTGGAAGAAAACCATTCAGACATTCTGCTTGGCTTGGGGACCAAAGTACTCAGGCAGTACCTGGGTGCCCTGAAGACCCTGAGTCAGTCCCTGAGC
ACACAAGTGGCTCACTATGACATCTACTCAATGGCAGTGGGGACACTCATGGTTTTGGAGGTTCTCACCCTGTTTCTCCTTAGCACTCCACATGTGCTGTGCAGAAAGGCTGAACTGGATGTTCCCCT
GTTGTCTCCTGTGTTTTCTCTGCTCTTTTACTTGATATTTTTGGTTCTTTCGGCCATTCATGTCCTGGTGTGCACCTCATCTGAGAGCTCGTGCTACCTCTGTAACCTCCCGTGGCTGGCAGCAGGGG
CTGTGATGGTACTTGTTTCTGCACTTTTCTGTGCAATTTTGTCCGCTCTTATCAGGATGGTCACCGACGGCACTCTGCTGAGGAAGAATGCAACTGTTGCCAGCTCAGGGTGGTCAGAGGTGAACCTC
CTTCTTCTTCTGGGCACAGTGGGCCATGTTCTGAGCCTGGGAGCCAGCAGCTTCGTGGAGGAAGAGCACCAGACGTGGTATTTCCTTATTAATACTCTGTGCCTGGCTCTGAGCCAGGAAACCTGTAG
GAGTTACTTCCTGGGAGATGACTGTGAACCTCAGCATCACTTCCAGGTGGAACAAAAATGTGTGAATGTCCTTGCCTGTACCCTGCAGGACAGTACAAGCTGCAGTACCCCTGAGTCTGAGTCTGACA
CAGCAGGTAAACGGGCCTCCCTGTTGGAAGCACACAGAAGCTGCAAATGGTGGACAGTGCTGGCAAGTCCGTGGCTGGTGCTGATCTGCTGCCGGCTACTGCGCTCCTTGAACCAGACAGGGGTGCAG
GGAGCCCATCGCCCTGACTTTAGTCACTGGCTTACCAGCTCTGACCACAAAGTCCATCTCTCAGGCCTGGCTGCCCTCTCCCTGGTTGTGATCTTCATTTTAGTTCAGAAGGGCTGCTCTCTTGTATC
CAAGGTGGCCCTAGCACTGGGGCTGCTGGGTGTCTTCTGCTACAGAGCAGCCATTGGGATTGTGCTGTTCCCGTGGCAACCAGACAACAAAGGCATCTCAAAGGGAATTACTGAAGCTCGTTTTGTTT
ATGTCTTTGTCCTTGGCATTCTGTTCACCGGCACCAAAGATTTACTTAAAGCACAAGTCATTGCAGCAGACTTCAAAACCAAGATTGTAGGCTTGTGGGAGATACATAGTGGGCTAGTTCTTCTGGCA
GCTCTGCTCTTGAGACCACACAACCTTCCAGTGTTAGCCTTTAGCCTCTTGATTCAGACTGTAATGACTAAGTTCATCTGGAAGCCCCTGAGACATGATGCAGCCGAGGTCACTGTAATGCATTATTG
GTTCGGTCAAGCATTCTTCTATTTCCAGTAGAGAAGTTGGTTTGCAATCTGACAGCATCCAGGAGATGTGCTCGCGATGTGCGCCTCCTAGGACCACGTGCATCATCCTCAAGT

hide sequence

RefSeq Acc Id:

XM_006250517 ⟹ XP_006250579

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,549,891 - 1,578,174 (-)	NCBI
mRatBN7.2	14	1,404,911 - 1,433,199 (-)	NCBI

Sequence:

show sequence

TTTCCCATGCGCGGGCGCTGGCGAGGCGCGCCGGAAGCTAGATCTTGACAGTCGGGGTGTGTGGGTCCTGGATGCAGGTGTGCGGCCCCCGCTGCTACACTTAATATCCTGCGGTCCCGCCCAGCGGC
TGGGCAGAATGCGGCTGGGCTCCGGGGCCTTCGCTGCCAGCTGCGTAGCGATTGAGGTGATTGGGGTCGCGATATTTATTCGGGGATTCTTCCCAGCTCCTGTGCGTTCCTCTGCCAGACCGGAGCAT
GGTGCAGAGACCCCAGCGCCCGAACCCGTAGCAGGAGTCAGTTCGAACTGGACCAAGCTGCCGCCACCACTCTTCAGTAAAGTGGTTATTATGCTGATAGATGCTTTAAGAGATGATTTTGTGTTTGG
GTCAAAAGGCGTGAAGTATATGCCCTACACAACGTATCTGGTAGAAAAAGGAGCGTCTCATAGTTTCGTGGCTGAGGCAAAGCCACCCACAGTTACTATGCCTCGAATCAAGGCATTGATGACGGGAA
GTCTCCCTGGCTTTGTTGATGTCATCAGGAATCTCAATTCTCCTGTTCTCCTAGAAGACAATGTGATAAGACAGGCAAAGGCTGCTGGGAAAAGAATAATCTTTTATGGAGATGAAACATGGGTTAAA
TTATTCCCAAAGCACTTTGTGGAATATGATGGGACAACATCATTCTTTGTGTCAGATTATATAGAGGTGGATAACAATGTCACAAGGCATTTGGACAAAGTATTAAGAAGAGGAGACTGGGATGTGCT
GATCCTTCACTACTTAGGGCTAGATCACATTGGCCACATTTCTGGGCCCAACAGCCCCCTGATTGGTCACAAGCTCAGCGAAATGGACAGTGTGCTCATGAAAATTCATACGTCACTGTTGTCAAAGG
ACAGAGAAACTCTCTTACCCAGTCTGCTGGTTCTCTGTGGTGACCATGGAATGTCTGAAACAGGGAGTCATGGGGCCTCTTCCACAGAGGAAGTGAGCACACCTCTACTCCTAATCAGCTCTGCGTTT
GAAAGGAAACCTGGGGATGTTCGACACCCAAAGCACGTCCAGCAGACTGACTTGGCTGCAACACTAGCAATAGGACTCGGTTTGCCAATTCCTAAAGATAATGTAGGAAGCCTCTTATTCCCAGTTAT
AGAGGGAAAACAGATGAGAGAGCAGCTGAGATTTTTACATTTAAACACATTACAGCTTAGCAAACTATTGCAAGAAAACATACCAGCCTATGAAAAAGATCCTGGATTTGAGCAGTTTAAAATGGCAG
AAAGGTTGCATGGAAACTGGGTCAAACTGCACTTGGAAGAAAACCATTCAGACATTCTGCTTGGCTTGGGGACCAAAGTACTCAGGCAGTACCTGGGTGCCCTGAAGACCCTGAGTCAGTCCCTGAGC
ACACAAGTGGCTCACTATGACATCTACTCAATGGCAGTGGGGACACTCATGGTTTTGGAGGTTCTCACCCTGTTTCTCCTTAGCACTCCACATGTGCTGTGCAGAAAGGCTGAACTGGATGTTCCCCT
GTTGTCTCCTGTGTTTTCTCTGCTCTTTTACTTGATATTTTTGGTTCTTTCGGCCATTCATGTCCTGGTGTGCACCTCATCTGAGAGCTCGTGCTACCTCTGTAACCTCCCGTGGCTGGCAGCAGGGG
CTGTGATGGTACTTGTTTCTGCACTTTTCTGTGCAATTTTGTCCGCTCTTATCAGGATGGTCACCGACGGCACTCTGCTGAGGAAGAATGCAACTGTTGCCAGCTCAGGGTGGTCAGAGGTGAACCTC
CTTCTTCTTCTGGGCACAGTGGGCCATGTTCTGAGCCTGGGAGCCAGCAGCTTCGTGGAGGAAGAGCACCAGACGTGGTATTTCCTTATTAATACTCTGTGCCTGGCTCTGAGCCAGGAAACCTGTAG
GAGTTACTTCCTGGGAGATGACTGTGAACCTCAGCATCACTTCCAGGTGGAACAAAAATGTGTGAATGTCCTTGCCTGTACCCTGCAGGACAGTACAAGCTGCAGTACCCCTGAGTCTGAGTCTGACA
CAGCAGGTAAACGGGCCTCCCTGTTGGAAGCACACAGAAGCTGCAAATGGTGGACAGTGCTGGCAAGTCCGTGGCTGGTGCTGATCTGCTGCCGGCTACTGCGCTCCTTGAACCAGACAGGGGTGCAG
GGAGCCCATCGCCCTGACTTTAGTCACTGGCTTACCAGCTCTGACCACAAAGTCCATCTCTCAGGCCTGGCTGCCCTCTCCCTGGTTGTGATCTTCATTTTAGTTCAGAAGGGCTGCTCTCTTGTATC
CAAGGTGGCCCTAGCACTGGGGCTGCTGGGTGTCTTCTGCTACAGAGCAGCCATTGGGATTGTGCTGTTCCCGTGGCAACCAGACAACAAAGGCATCTCAAATGGTTCAGCACTGAGCCGCGCTTGCT
TCTGCTATGCACTGATTTGCTCTGTTCCAGTTGCCACGTACATTGTTCTGGTGACGTCTCTGCGCTACCACTTATTCATATGGAGTGTGTTTTCCCCAAAGCTGCTCTATGAAGGGATGCATCTGCTC
ATCACGGCTGCCATTTGTGCAGTGTTCACGGCCACAAACCAGACTCGCCACTCGAGGGCTTAGGTGGGGACAGATATTTGAAGCTGATCAGTAACTGTTTGCAGTATGGATTTGAGTATCGAACTGCT
TACATGCAAGATTATTCTGTGGTGGAAAGAAAAAGGATGGGAAGCCTAGGGAATGAGTGGATAACTTAATTTTACTTAGATTTAAATTAAAACCAGATTGATAAAAGACTCCCTTTAAGATTTCCCCA
TTGATAATCACTTTCTCAATCCTCTCTGAGTGAGCTGTGACTGCTGTGCTTAAATGGATGGAAGAAAAGCTCTGGGCTTTATCATTGCGTTTATCTCGGAGAGCCCAGGGGCCCTGTAGGAGGAGCTG
CGGCTGCTACAGGACTACATCAAAGACCTCGCACTCCTAAGAACTCCTAAGATCAGAGTTAGTAGCATTTGAAATGAAAACTAGGTCATTTTAAACATTACTCATTTAAAAAATGCTCTGTTAGTCGA
CAAGGTGGAGCACACTTGCATGATGCCATACTCAAGAGGGCAGAACCACGAGCGTCCAGACTGCTTAGACTACATAGGATGACCATGCCTCAACTCCTCCCCACCCCAATAAAAACTGCTGCATATTA
ATATAACAACGTAATTATATTTTTCAAAACAAATATTTAATGAGGAAAATAGTATTTTTTTATGTTTTTACAAATGTCTTAAATGACTCAATTGAAGATAGTTGGAATCTACATTTGATCTATTGTAA
TTTATGTCTGAAAAATAAGGAATCCATCTTCACTCAAATCTGTGGTTGGAAAAGTGTGAAGTATCTTAATACCACCTCTTCTCTGTCAGCTTGAATACTGTGCTTTGATACCAAAACAAAAATTGGCA
GGTAGTATATAGGGTTTCATTGTTGCTGGGACAAGATCTCCCAAGTTTTGATCCTCCCCAGTCTCCCAAGTGTTGGGCTTGCAGGTGTGCGGCCCTGAGCCTGGTTTCAGGGGTTAGCTCTTCCAAGC
TAGTTGGAAAGAAACAGGAGAGATGTAGTCATGTATGCAGGTTAAACTAGTGATCTGGTTAGGGTCTTTTTCGTAGTTTAAACATATTTCAGTCATGTAATTTTAAAGAGGCCTGTCCTTGAGCCAGT
AGAATTGTGTCTATATTACCATGGACTCTGCTGACACAAAACTGATCTGCCAGGCAAGATATGCCCCTAATACAATAATGACATGAACGTCCTGGTGGTAACTAATCATTTTATGGTTGAATTTGAAA
CCTCATCTATATCATGCTGTGAACCTGGTCAAGCTCATGGTCAGAGAGGTCCTAGGCTCTAAGAGAAAGCTTACTAGTGTTTTTCACAATGGATATGTTGTCACACTGTCATTGGAATGTCTGTGTTT
GCCACCCACAGATCAGGGCTGCTCTTAACCTTGGTCAGAAAGGCTGACAGAGGTTAATGCAAAGACTGTAGTTCGTCAGTGTGTGGAGAATAATTGACTGTTGAATCTTCCATCCCAAATGAACCATC
TGTCTCTCTATTTCTATCTCTCTCTGTGTCTTTGTTCCTGTTATCTCCCCCCACACCCACCCTCCCAACAAACATACACACCAAAAATCAAAACATTTTAGAAGAAACAGAAAGAATGCAAGGGCTGG
AGAATGAGGACAGGTGTTGTGAAATTCTGGTTACCTACCTAAGACCTGCACAAAATTTAGGTCCTCGACATTTTAACATAAATAGGGAAAGGGTACTTGGGGTACCAACCCTAGCTGAAGAGCTATTG
TTAGTTAATGGCTGCTGGAGAAGGAGTCATTTTCCTTCAGACATATAGCCACTAATACGTTGCCTGTTACCTAGTCAATATCCACATTCACATCTAAGTGGGCCTAATTAAACTCTGTCACTAGGGGA
AAAGAAGTGAAAGGAGGAGGAAGAAGCGTTCCAGAGGAGGGGTAGAAGAGGAGGATGGGGTAAAAATGGTCAAAATGTATGATATAGATGTACAAAATGATCAAAGATTAAATACTATATTTTAAGAG
GGTAAGTTATGTTAAGTCTATGTGTATATATGCTATAGCTTGTGAATTTAAAGAGGGAAAGAAAAATCCACAATGTATTTGGTGTCATAAAAATTATAGTTTTATCATCTATTGTATTTTCTACAGGA
AATAAATAATATGAGTTTTCTGTTGTTTAGACATTTAAATTCCTTAGATACTTCAATAAAAACAAGCCGTATAGCCCCCTCACATTAA

hide sequence

RefSeq Acc Id:

XM_039092608 ⟹ XP_038948536

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,549,891 - 1,573,954 (-)	NCBI
mRatBN7.2	14	1,404,911 - 1,428,973 (-)	NCBI

RefSeq Acc Id:

XM_063272800 ⟹ XP_063128870

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,555,860 - 1,578,174 (-)	NCBI

RefSeq Acc Id:

XR_005493074

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,561,034 - 1,578,174 (-)	NCBI
mRatBN7.2	14	1,416,054 - 1,433,199 (-)	NCBI


Protein RefSeqs	NP_001414591	(Get FASTA)	NCBI Sequence Viewer
	XP_006250576	(Get FASTA)	NCBI Sequence Viewer
	XP_006250577	(Get FASTA)	NCBI Sequence Viewer
	XP_006250578	(Get FASTA)	NCBI Sequence Viewer
	XP_006250579	(Get FASTA)	NCBI Sequence Viewer
	XP_038948536	(Get FASTA)	NCBI Sequence Viewer
	XP_063128870	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL84002	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000066161
	ENSRNOP00000066161.2
	ENSRNOP00000067732
	ENSRNOP00000067732.3

Ensembl Acc Id:

ENSRNOP00000067732 ⟸ ENSRNOT00000072386

Ensembl Acc Id:

ENSRNOP00000066161 ⟸ ENSRNOT00000075415

RefSeq Acc Id:	XP_006250579 ⟸ XM_006250517
- Peptide Label:	isoform X4
- UniProtKB:	A6KPG3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRLGSGAFAASCVAIEVIGVAIFIRGFFPAPVRSSARPEHGAETPAPEPVAGVSSNWTKLPPPLFSKVVIMLIDALRDDFVFGSKGVKYMPYTTYLVEKGASHSFVAEAKPPTVTMPRIKALMTGSLP GFVDVIRNLNSPVLLEDNVIRQAKAAGKRIIFYGDETWVKLFPKHFVEYDGTTSFFVSDYIEVDNNVTRHLDKVLRRGDWDVLILHYLGLDHIGHISGPNSPLIGHKLSEMDSVLMKIHTSLLSKDRE TLLPSLLVLCGDHGMSETGSHGASSTEEVSTPLLLISSAFERKPGDVRHPKHVQQTDLAATLAIGLGLPIPKDNVGSLLFPVIEGKQMREQLRFLHLNTLQLSKLLQENIPAYEKDPGFEQFKMAERL HGNWVKLHLEENHSDILLGLGTKVLRQYLGALKTLSQSLSTQVAHYDIYSMAVGTLMVLEVLTLFLLSTPHVLCRKAELDVPLLSPVFSLLFYLIFLVLSAIHVLVCTSSESSCYLCNLPWLAAGAVM VLVSALFCAILSALIRMVTDGTLLRKNATVASSGWSEVNLLLLLGTVGHVLSLGASSFVEEEHQTWYFLINTLCLALSQETCRSYFLGDDCEPQHHFQVEQKCVNVLACTLQDSTSCSTPESESDTAG KRASLLEAHRSCKWWTVLASPWLVLICCRLLRSLNQTGVQGAHRPDFSHWLTSSDHKVHLSGLAALSLVVIFILVQKGCSLVSKVALALGLLGVFCYRAAIGIVLFPWQPDNKGISNGSALSRACFCY ALICSVPVATYIVLVTSLRYHLFIWSVFSPKLLYEGMHLLITAAICAVFTATNQTRHSRA hide sequence

RefSeq Acc Id:	XP_006250576 ⟸ XM_006250514
- Peptide Label:	isoform X1
- UniProtKB:	A6KPG3 (UniProtKB/TrEMBL), M0RDM7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRLGSGAFAASCVAIEVIGVAIFIRGFFPAPVRSSARPEHGAETPAPEPVAGVSSNWTKLPPPL FSKVVIMLIDALRDDFVFGSKGVKYMPYTTYLVEKGASHSFVAEAKPPTVTMPRIKALMTGSLPGFVDVIRNLNSPVLLEDNVIRQAKAAGKRIIFYGDETWVKLFPKHFVEYDGTTSFFVSDYIEVD NNVTRHLDKVLRRGDWDVLILHYLGLDHIGHISGPNSPLIGHKLSEMDSVLMKIHTSLLSKDRETLLPSLLVLCGDHGMSETGSHGASSTEEVSTPLLLISSAFERKPGDVRHPKHVQQTDLAATLAI GLGLPIPKDNVGSLLFPVIEGKQMREQLRFLHLNTLQLSKLLQENIPAYEKDPGFEQFKMAERLHGNWVKLHLEENHSDILLGLGTKVLRQYLGALKTLSQSLSTQVAHYDIYSMAVGTLMVLEVLTL FLLSTPHVLCRKAELDVPLLSPVFSLLFYLIFLVLSAIHVLVCTSSESSCYLCNLPWLAAGAVMVLVSALFCAILSALIRMVTDGTLLRKNATVASSGWSEVNLLLLLGTVGHVLSLGASSFVEEEHQ TWYFLINTLCLALSQETCRSYFLGDDCEPQHHFQVEQKCVNVLACTLQDSTSCSTPESESDTAGKRASLLEAHRSCKWWTVLASPWLVLICCRLLRSLNQTGVQGAHRPDFSHWLTSSDHKVHLSGLA ALSLVVIFILVQKGCSLVSKVALALGLLGVFCYRAAIGIVLFPWQPDNKGISNREVGLQSDSIQEMCSRCAPPRTTCIILKWRLQGKGNSNNIATIDISAGCVGLETYMEVPATFLTVFGTYVGPVLW ASHLVYFLSSEGNNGSALSRACFCYALICSVPVATYIVLVTSLRYHLFIWSVFSPKLLYEGMHLLITAAICAVFTATNQTRHSRA hide sequence

RefSeq Acc Id:	XP_006250577 ⟸ XM_006250515
- Peptide Label:	isoform X2
- UniProtKB:	A6KPG3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLIDALRDDFVFGSKGVKYMPYTTYLVEKGASHSFVAEAKPPTVTMPRIKALMTGSLPGFVDVIRNLNSPVLLEDNVIRQAKAAGKRIIFYGDETWVKLFPKHFVEYDGTTSFFVSDYIEVDNNVTRH LDKVLRRGDWDVLILHYLGLDHIGHISGPNSPLIGHKLSEMDSVLMKIHTSLLSKDRETLLPSLLVLCGDHGMSETGSHGASSTEEVSTPLLLISSAFERKPGDVRHPKHVQQTDLAATLAIGLGLPI PKDNVGSLLFPVIEGKQMREQLRFLHLNTLQLSKLLQENIPAYEKDPGFEQFKMAERLHGNWVKLHLEENHSDILLGLGTKVLRQYLGALKTLSQSLSTQVAHYDIYSMAVGTLMVLEVLTLFLLSTP HVLCRKAELDVPLLSPVFSLLFYLIFLVLSAIHVLVCTSSESSCYLCNLPWLAAGAVMVLVSALFCAILSALIRMVTDGTLLRKNATVASSGWSEVNLLLLLGTVGHVLSLGASSFVEEEHQTWYFLI NTLCLALSQETCRSYFLGDDCEPQHHFQVEQKCVNVLACTLQDSTSCSTPESESDTAGKRASLLEAHRSCKWWTVLASPWLVLICCRLLRSLNQTGVQGAHRPDFSHWLTSSDHKVHLSGLAALSLVV IFILVQKGCSLVSKVALALGLLGVFCYRAAIGIVLFPWQPDNKGISKGITEARFVYVFVLGILFTGTKDLLKAQVIAADFKTKIVGLWEIHSGLVLLAALLLRPHNLPVLAFSLLIQTVMTKFIWKPL RHDAAEVTVMHYWFGQAFFYFQGNSNNIATIDISAGCVGLETYMEVPATFLTVFGTYVGPVLWASHLVYFLSSEGNNGSALSRACFCYALICSVPVATYIVLVTSLRYHLFIWSVFSPKLLYEGMHLL ITAAICAVFTATNQTRHSRA hide sequence

Protein Domains

GPI ethanolamine phosphate transferase 2 C-terminal

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0RDM7-F1-model_v2	AlphaFold	M0RDM7	1-986	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
Ensembl Genes	ENSRNOG00000049895	Ensembl
	ENSRNOG00000050374	Ensembl
	ENSRNOG00000071170	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000072386	ENTREZGENE
	ENSRNOT00000072386.3	UniProtKB/TrEMBL
	ENSRNOT00000075415	ENTREZGENE
	ENSRNOT00000075415.3	UniProtKB/TrEMBL
Gene3D-CATH	3.40.720.10	UniProtKB/TrEMBL
InterPro	Alkaline_phosphatase_core	UniProtKB/TrEMBL
	Phosphodiest/P_Trfase	UniProtKB/TrEMBL
	PIG-G_N	UniProtKB/TrEMBL
	PIGG/GPI7	UniProtKB/TrEMBL
	PIGG/GPI7_C	UniProtKB/TrEMBL
KEGG Report	rno:100910143	UniProtKB/TrEMBL
NCBI Gene	Pigg	ENTREZGENE
PANTHER	GPI ETHANOLAMINE PHOSPHATE TRANSFERASE 2	UniProtKB/TrEMBL
	PTHR23072	UniProtKB/TrEMBL
Pfam	Phosphodiest	UniProtKB/TrEMBL
	PIGO_PIGG	UniProtKB/TrEMBL
PhenoGen	Pigg	PhenoGen
RatGTEx	ENSRNOG00000049895	RatGTEx
	ENSRNOG00000050374	RatGTEx
	ENSRNOG00000071170	RatGTEx
Superfamily-SCOP	SSF53649	UniProtKB/TrEMBL
UniProt	A6KPG3	ENTREZGENE, UniProtKB/TrEMBL
	M0R9J2	ENTREZGENE, UniProtKB/TrEMBL
	M0RDM7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Pigg	phosphatidylinositol glycan anchor biosynthesis, class G	LOC100910143	GPI ethanolamine phosphate transferase 2-like	Data merged from RGD:6499629	737654	PROVISIONAL
2012-07-05	LOC100910143	GPI ethanolamine phosphate transferase 2-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-02-28	Pigg	phosphatidylinositol glycan anchor biosynthesis, class G	RGD1560335_predicted	similar to GPI7 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1560335_predicted	similar to GPI7 (predicted)	LOC305626	similar to GPI7	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC305626	similar to GPI7			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)