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Gene: Szrd1 (SUZ RNA binding domain containing 1) Rattus norvegicus

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Symbol:

Szrd1

Name:

SUZ RNA binding domain containing 1

RGD ID:

1560286

Description:

Orthologous to human SZRD1 (SUZ RNA binding domain containing 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; amitrole.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

C1orf144; LOC500575; putative MAPK activating protein PM20,PM21; RGD1560286; similar to DNA segment, Chr 4, ERATO Doi 22, expressed; SUZ domain-containing protein 1; SUZ RNA-binding domain-containing; UPF0485 protein C1orf144 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SZRD1 (SUZ RNA binding domain containing 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Szrd1 (SUZ RNA binding domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Szrd1 (SUZ RNA binding domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SZRD1 (SUZ RNA binding domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SZRD1 (SUZ RNA binding domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Szrd1 (SUZ RNA binding domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SZRD1 (SUZ RNA binding domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SZRD1 (SUZ RNA binding domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Szrd1 (SUZ RNA binding domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Szrd1 (SUZ RNA binding domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	SZRD1 (SUZ RNA binding domain containing 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Szrd1 (SUZ RNA binding domain containing 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	szrd1 (SUZ RNA binding domain containing 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG31908	Alliance	DIOPT (Hieranoid\|OrthoFinder\|PANTHER)
Drosophila melanogaster (fruit fly):	CG31908	Alliance	DIOPT (OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	szrd1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	158,701,753 - 158,726,276 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	158,701,753 - 158,726,248 (-)	Ensembl				GRCr8
mRatBN7.2	5	153,418,748 - 153,443,286 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	153,418,748 - 153,443,252 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	156,107,432 - 156,131,960 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	157,880,706 - 157,905,234 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	157,869,890 - 157,894,418 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	159,638,259 - 159,662,790 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	159,638,259 - 159,662,754 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	163,350,635 - 163,375,163 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	159,973,091 - 159,997,580 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	151,783,141 - 151,807,636 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-catechin (ISO)

(1->4)-beta-D-glucan (ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP,ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

clofibrate (ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

cylindrospermopsin (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP)

disulfiram (ISO)

fenthion (ISO)

finasteride (EXP)

flutamide (EXP)

FR900359 (ISO)

gemcitabine (ISO)

gentamycin (EXP)

hydrogen peroxide (ISO)

indometacin (ISO)

ivermectin (ISO)

mercury atom (ISO)

mercury(0) (ISO)

methidathion (ISO)

nitrates (ISO)

obeticholic acid (ISO)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

pirinixic acid (ISO)

tamibarotene (ISO)

tamoxifen (ISO)

titanium dioxide (ISO)

torcetrapib (ISO)

trichloroethene (EXP)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932

Genomics

Comparative Map Data

Szrd1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	158,701,753 - 158,726,276 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	158,701,753 - 158,726,248 (-)	Ensembl				GRCr8
mRatBN7.2	5	153,418,748 - 153,443,286 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	153,418,748 - 153,443,252 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	156,107,432 - 156,131,960 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	157,880,706 - 157,905,234 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	157,869,890 - 157,894,418 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	159,638,259 - 159,662,790 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	159,638,259 - 159,662,754 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	163,350,635 - 163,375,163 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	159,973,091 - 159,997,580 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	151,783,141 - 151,807,636 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

SZRD1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	16,367,242 - 16,398,145 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	16,352,575 - 16,398,147 (+)	Ensembl			hg38	GRCh38
GRCh37	1	16,693,737 - 16,724,640 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	16,566,307 - 16,595,451 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	1	15,173,509 - 15,204,567 (+)	NCBI		Celera
Cytogenetic Map	1	p36.13	NCBI
HuRef	1	15,210,907 - 15,242,024 (+)	NCBI		HuRef
CHM1_1	1	16,492,192 - 16,523,316 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	15,808,777 - 15,839,678 (+)	NCBI		T2T-CHM13v2.0

Szrd1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	140,840,326 - 140,867,110 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	140,840,312 - 140,867,086 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	141,112,978 - 141,139,799 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	141,113,001 - 141,139,775 (-)	Ensembl			mm10	GRCm38
MGSCv37	4	140,668,930 - 140,695,711 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	140,385,091 - 140,411,872 (-)	NCBI		MGSCv36	mm8
Celera	4	142,919,577 - 142,945,790 (-)	NCBI		Celera
Cytogenetic Map	4	D3	NCBI
cM Map	4	73.38	NCBI

Szrd1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955527	1,938,477 - 1,961,521 (-)	Ensembl
ChiLan1.0	NW_004955527	1,938,477 - 1,961,524 (-)	NCBI	ChiLan1.0	ChiLan1.0

SZRD1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	210,522,897 - 210,554,087 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	209,771,526 - 209,802,605 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	15,504,491 - 15,535,571 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	16,495,288 - 16,525,404 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	16,495,288 - 16,525,404 (+)	Ensembl			panPan2	panpan1.1

SZRD1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	81,320,737 - 81,350,712 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	81,327,795 - 81,350,641 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	77,857,021 - 77,886,781 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	81,966,868 - 81,996,656 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	81,971,186 - 81,996,627 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	78,719,826 - 78,749,573 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	79,736,692 - 79,766,421 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	80,804,820 - 80,834,577 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Szrd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	38,002,281 - 38,027,057 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	3,826,997 - 3,852,668 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	3,827,077 - 3,852,675 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SZRD1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	75,459,138 - 75,485,324 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	75,459,124 - 75,485,326 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	69,774,262 - 69,800,471 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SZRD1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	115,930,518 - 115,965,023 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	115,933,259 - 115,937,803 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666054	19,411,780 - 19,444,933 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Szrd1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624764	2,472,426 - 2,500,251 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624764	2,472,771 - 2,500,136 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Szrd1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	17,007,443 - 17,032,278 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Szrd1
103 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	1357
Count of miRNA genes:	323
Interacting mature miRNAs:	429
Transcripts:	ENSRNOT00000012200, ENSRNOT00000045226, ENSRNOT00000046131
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10053720	Scort26	Serum corticosterone level QTL 26	2.06	0.0147	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	130249266	172190305	Rat
8552960	Pigfal15	Plasma insulin-like growth factor 1 level QTL 15			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	116702075	161702075	Rat
1354583	Despr3	Despair related QTL3	4.98	0.0002	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	5	132930505	172190305	Rat
61444	Strs2	Sensitivity to stroke QTL 2	4.7		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	5	141212838	172190305	Rat
1300119	Bp180	Blood pressure QTL 180	3.82		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	5	149642129	171146538	Rat
61452	Ciaa5	CIA Autoantibody QTL 5	3.5		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	5	99905133	172190305	Rat
8552908	Pigfal4	Plasma insulin-like growth factor 1 level QTL 4	6.6		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	133789363	172190305	Rat
1331803	Rf32	Renal function QTL 32	2.798		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	134369199	172190305	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	65089051	166764498	Rat
7794791	Mcs33	Mammary carcinoma susceptibility QTL 33	1.93		mammary gland integrity trait (VT:0010552)	mammary tumor incidence/prevalence measurement (CMO:0000946)	5	136631198	172190305	Rat
1354631	Swd2	Spike wave discharge measurement QTL 2	3.64	0.0002	brain electrophysiology trait (VT:0010557)	brain total spike-and-wave discharge duration (CMO:0001740)	5	156396728	172190305	Rat
1598861	Cm64	Cardiac mass QTL 64	2.9		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	133081618	172190305	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
631263	Cm24	Cardiac mass QTL 24	3.5		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	5	149805999	162987697	Rat
631505	Bp103	Blood pressure QTL 103	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	138002522	170842766	Rat
1581505	Rf54	Renal function QTL 54			kidney physiology trait (VT:0002136)	kidney 20-HETE level (CMO:0001854)	5	133270647	172190305	Rat
2317753	Glom24	Glomerulus QTL 24	3.1		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	5	141764300	172190305	Rat
8694169	Bw148	Body weight QTL 148	5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	133789363	172190305	Rat
1331721	Bp210	Blood pressure QTL 210	3.413		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	5	148093485	172129029	Rat
1581510	Cm54	Cardiac mass QTL 54	3.4	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	5	125969677	172190305	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55124766	172190305	Rat
631272	Lanf1	Left ventricular atrial natriuretic factor QTL 1	12		heart left ventricle natriuretic peptide A amount (VT:0010596)	heart left ventricle natriuretic peptide A level (CMO:0002165)	5	156396728	167181764	Rat
724525	Bp147	Blood pressure QTL 147	4.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	131708216	172190305	Rat
1598847	Cm62	Cardiac mass QTL 62	3.4		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	114131300	159131300	Rat
2313096	Bmd78	Bone mineral density QTL 78	3.1	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	5	149661912	166600247	Rat
8694441	Bw169	Body weight QTL 169	17.61	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	5	116702075	161702075	Rat
8694389	Bw160	Body weight QTL 160	6.17	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	5	116702075	161702075	Rat
8694198	Abfw3	Abdominal fat weight QTL 3	16.13	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	5	116702075	161702075	Rat
1298090	Bp155	Blood pressure QTL 155	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	5	156289283	171137955	Rat
1298089	Scl14	Serum cholesterol level QTL 14	5.8	0.0004	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	114131300	159131300	Rat
1598819	Bp292	Blood pressure QTL 292	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	133081618	172190305	Rat

Markers in Region

D4Ertd22e

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	153,421,206 - 153,421,413 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	159,640,718 - 159,640,924	NCBI	Rnor6.0
Rnor_5.0	5	163,353,094 - 163,353,300	UniSTS	Rnor5.0
RGSC_v3.4	5	159,975,550 - 159,975,756	UniSTS	RGSC3.4
Celera	5	151,785,600 - 151,785,806	UniSTS
Cytogenetic Map	5	q36	UniSTS

RH41831

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	5	158,701,791 - 158,701,872 (+)	Marker Load Pipeline
mRatBN7.2	5	153,418,786 - 153,418,865 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	159,638,298 - 159,638,376	NCBI	Rnor6.0
Rnor_5.0	5	163,350,674 - 163,350,752	UniSTS	Rnor5.0
RGSC_v3.4	5	159,973,130 - 159,973,208	UniSTS	RGSC3.4
Celera	5	151,783,180 - 151,783,258	UniSTS
Cytogenetic Map	5	q36	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	92	59	6	356	192	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001114599	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_102345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006239264	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_354339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_354340	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC141489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC083784	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BP502965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ213371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222061	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000045226 ⟹ ENSRNOP00000048348

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	158,701,753 - 158,726,248 (-)	Ensembl
mRatBN7.2 Ensembl	5	153,418,749 - 153,443,252 (-)	Ensembl
Rnor_6.0 Ensembl	5	159,638,259 - 159,662,754 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095397 ⟹ ENSRNOP00000077933

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	158,701,753 - 158,707,778 (-)	Ensembl
mRatBN7.2 Ensembl	5	153,418,748 - 153,424,773 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102771 ⟹ ENSRNOP00000092111

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	153,418,748 - 153,443,252 (-)	Ensembl

RefSeq Acc Id:

NM_001114599 ⟹ NP_001108071

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	158,701,753 - 158,726,248 (-)	NCBI
mRatBN7.2	5	153,418,748 - 153,443,243 (-)	NCBI
Rnor_6.0	5	159,638,259 - 159,662,754 (-)	NCBI
Rnor_5.0	5	163,350,635 - 163,375,163 (-)	NCBI
RGSC_v3.4	5	159,973,091 - 159,997,580 (-)	RGD
Celera	5	151,783,141 - 151,807,636 (-)	NCBI

Sequence:

show sequence

GGAAAGCGGCGAGTAAGATGGAAGATGAGGAGGTCGCTGAGAGCTGGGAGGAGGCGGCAGACAG
CGGGGAAATAGACAGACGGTTGGAAAAAAAACTGAAGATCACACAAAAGGAGAGCAGGAAATCC
AAATCTCCTCCCAAAGTGCCCATTGTGATTCAAGACGATAGCCTTCCCACGGGGCCCCCTCCAC
AGATCCGCATCCTCAAGAGGCCCACCAGCAACGGTGTGGTCAGCAGCCCCAACTCCACCAGCAG
GCCAGCCCTTCCTGTCAAGTCCCTAGCACAGCGGGAGGCAGAGTACGCAGAGGCTCGGAGACGG
ATCCTAGGCAGTGCCAGCCCTGAGGAGGAGCAGGAGAAACCCATCCTCGACAGGCCAACCAGGA
TCTCCCAACCCGAAGATAGCAGGCAGCCCAGTAATGTGATCAGACAGCCGTTGGGTCCTGACGG
GTCACAAGGCTTCAAACAGCGCAGATAAATGCAGGCCAGAAAGGCTGCTGCCGCCGCCGCCGCC
ACCACCACCACCACCGCCTCCTGGATTGTCTGCCATGGGTCGCACTGCTGTGGCAGACGTCTGG
ACTTGAGCAGAGGGAATAACCTGACTTACTTGCACTGTGATCCCCCTTGCTCCGCCCACTGTGA
CCTTGAACCCCATGCACTGTGACCTCTGCCTCCCCCCCTTCCCACTGTGATTGGCATGTTGACA
AGGGCTGTCCCAAGTCAATAGAAAGGGAAAGGGTGGGGATTAGGGGAGGATTAGGGGAACCTAC
CAAGGACTCAGAGTAGAGGGTCAGACAGTGCCACTTGGCCGCTTGGGGTAAAGCCAGTGCCAGC
AATAACAGTTTATCATGCTCATTAATTTGGGATTTCAAAACACAAATGAGAACTCCCCCACCCA
CCCCAAGTGCATGTCGCCATCACTTAAAGTAAGTTCCATTGAAAATATCCTTACTTTTTTTTTC
TTCCTATTTTTGTTTGTTTAATACAAATACCTGATTTGCAAGAAAAAGTGCATGGAAGGGGTTT
AGCAGTTTAATGAATTTTTAATTGAGAAAGGGTAGTTTAGTAGTCACTTAAAAGATGTTTCTAG
GAAATTTGCTAGAAACATTAACCAATAGGATTTTGATGAGCTTAGCTTCTGTATTCCTACTGCC
ACCCAGAAGAGAGGCCGGGCTCGGGAGCCCCCCATAGATGAGCATCTGTGCCTAAGTCATCTTC
CTCCAGCTAAGTCCCAGCTAAGTCACATAGAGATAGCTCAGAGAACCTGGGGGAGGGGCTGACC
CCACGTTAGTATTGTGAGAGATGGGGAAAGTGGTGAGCTTCCCCTTCCCACACCCCTCAGGGTG
GGCTGGCCCCCTACCAGCCAGGTTTGCTGCTTCTCGAGGAGGGCACAGAGTGACTCTGGGCTCA
GCAAGGCAGTGGTGACACTTGTCCAGTGTTGGCTGTCAGCCCAAGCCCAGGAGAGAGTCTGGCT
CCAGAACTCCAGGCCTCTGCCTGGAGAGCTCAGAAGGTAGAGAGGCCTGTCCCTTCCAGCAAGA
CTGGATGGAACGCTTAAGGACCTGTGGCGTGCCACGTCTATGGACAGTCCCGGCTCAGGGGCTA
TACAGGAGCATAGCCTGGGTGAAATGAGTGGACGAGAGCAGCTGGGGAAGCATCGGAAAAAACT
GCATTGCAAAGGCAGATGGCCAACAGGTTCCTCAGACAGTTTCCTCAGAGGGCTCGGCTGCCCT
TCCCTTAGCAGAGCAAGGCTGACATGAAGGCCATTTGTGTTCCCGAGCCTGGAGGTTTGCTTTG
GCTCTTGGTGGGAGAGGCTTGAGAGGGCGGCTGTGTCCCGCTAGGTGCTCTCTGGCTTTGTAGT
CTCTTCCAATGCACTTCGCCTTATCCCTCAGCCAGCCTGACAGCCTCCCCTCTCCTGACCAGCA
CTCAGGTTTGGGAGTGGGTGGTGTGGTGTGGGATTAGGGCAGCCATAGCAGCCAAGGTGTTGAG
TTTTGCAGGATCATACTGCCTTTGGTTCCTCTGGCCTGTGCCCTGTAGCAATGGCCCACATCAC
CTTCCCCTTGGGAAGAGCCCTTCCCCAACACAGCCCTAGACCTGCCTGAAACCAGGGGCCATCT
GTGAGTGAGCTGGAACAGAGCCTCAGCAGGAGGGCTGCTAGCTCAGCGTCTAGGGCCCGCCCAC
AGGGGCTAGTGGTTTTGGTTGAAGGACAGACTGTCCTTTCTCTGGAGAAGGGTGCAGAACCCTG
CTTGCCTGGTCCCCTCTAGTGGAAGCCAAGGGCAGGCAGCATCTGCACATGGAGAGTGTGCAAG
AGTGGCTCTCCCATCCCAGTCTGGCCAAAGGAGGCCCCGCCCACAGTGCCCCTGCACCTCCCAA
GCCCACCAGCAGTCATGCATTTGGCCTTCTAGATGGAGAGGTGGCCGGGCAAGACTAAAGGAAG
GAAGGAAAGAAGGAAAACAGACTGGTGTTGGGGGTGGGGGGCGCGGGAAACGGTTTGGATTTTG
TGTGTGTGTTTGTGGGGTTTATTTTTGTGTGTGTGTGTTTTCCATTTTTTGTAGTTGTCTATAA
CTCCATAAGTGCTTTTTTTTTTCTTTTTTCTTTTTTCTCTCTTTCTGTCTTTGAGTAAGTTGCA
GGCTTTGGCTTGGAAATCCCCAGGGGGATGAAGGGCAGGACCCTGAGGCTGCTGCCCCTTTGTC
TGCCTTCGTGGTACTGTCCCTTCCCCCAGCTCTTCCTGGACCCCATGAGCCAGGCCTCAGCCCT
TCCAGCTAACCGCTTCCCATGAGCCACTACTCTGATGTCAGCCTATAACCAAAGGAGCTGGGGG
TCCGGGTCTGGTGACCAGCCCTTCTCAGTCCCCTCAATCAGGGTGCTCCCCACCTGCAGGCAGG
AGGCAACACCCTATCTGCTGCCATCAGCCCCTTCCAGAGCCCACCTGTCCCGCCCAGCCCTGTC
CTGCCCTGCCATACCCTGCTCTGCCCCATCTGGGGGTGCTGTGCTCAGGGATGGGCCGGCAGGG
CTGATCCAGTCTCCCTGGTAAGCAGAGACTCAAGAAAACCTCTGGGGTCCTGCTTCTGGTCATA
TGACCCAGGGGGCGGGCCCTTGGGCACCTGTACAGAAGGGACTGGGAGGGAGGGCCGCACCCTG
CAGTCTTGCTCTGCTGGTGTAGCAGGCAGCTCCTCACCCTAACCCCCACCGCGGGCTCCTGAGT
CGGCAGATTAAGCATTTTATAAATTGTATTTTAAATACATGTTTTAAACTTGTCA

hide sequence

RefSeq Acc Id:

NR_102345

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	158,701,753 - 158,726,248 (-)	NCBI
mRatBN7.2	5	153,418,748 - 153,443,243 (-)	NCBI
Rnor_6.0	5	159,638,259 - 159,662,754 (-)	NCBI
Rnor_5.0	5	163,350,635 - 163,375,163 (-)	NCBI
Celera	5	151,783,141 - 151,807,636 (-)	NCBI

Sequence:

show sequence

GGAAAGCGGCGAGTAAGATGGAAGATGAGGAGGTCGCTGAGAGCTGGGAGGAGGCGGCAGACAG
CGGGCAGGAAATCCAAATCTCCTCCCAAAGTGCCCATTGTGATTCAAGACGATAGCCTTCCCAC
GGGGCCCCCTCCACAGATCCGCATCCTCAAGAGGCCCACCAGCAACGGTGTGGTCAGCAGCCCC
AACTCCACCAGCAGGCCAGCCCTTCCTGTCAAGTCCCTAGCACAGCGGGAGGCAGAGTACGCAG
AGGCTCGGAGACGGATCCTAGGCAGTGCCAGCCCTGAGGAGGAGCAGGAGAAACCCATCCTCGA
CAGGCCAACCAGGATCTCCCAACCCGAAGATAGCAGGCAGCCCAGTAATGTGATCAGACAGCCG
TTGGGTCCTGACGGGTCACAAGGCTTCAAACAGCGCAGATAAATGCAGGCCAGAAAGGCTGCTG
CCGCCGCCGCCGCCACCACCACCACCACCGCCTCCTGGATTGTCTGCCATGGGTCGCACTGCTG
TGGCAGACGTCTGGACTTGAGCAGAGGGAATAACCTGACTTACTTGCACTGTGATCCCCCTTGC
TCCGCCCACTGTGACCTTGAACCCCATGCACTGTGACCTCTGCCTCCCCCCCTTCCCACTGTGA
TTGGCATGTTGACAAGGGCTGTCCCAAGTCAATAGAAAGGGAAAGGGTGGGGATTAGGGGAGGA
TTAGGGGAACCTACCAAGGACTCAGAGTAGAGGGTCAGACAGTGCCACTTGGCCGCTTGGGGTA
AAGCCAGTGCCAGCAATAACAGTTTATCATGCTCATTAATTTGGGATTTCAAAACACAAATGAG
AACTCCCCCACCCACCCCAAGTGCATGTCGCCATCACTTAAAGTAAGTTCCATTGAAAATATCC
TTACTTTTTTTTTCTTCCTATTTTTGTTTGTTTAATACAAATACCTGATTTGCAAGAAAAAGTG
CATGGAAGGGGTTTAGCAGTTTAATGAATTTTTAATTGAGAAAGGGTAGTTTAGTAGTCACTTA
AAAGATGTTTCTAGGAAATTTGCTAGAAACATTAACCAATAGGATTTTGATGAGCTTAGCTTCT
GTATTCCTACTGCCACCCAGAAGAGAGGCCGGGCTCGGGAGCCCCCCATAGATGAGCATCTGTG
CCTAAGTCATCTTCCTCCAGCTAAGTCCCAGCTAAGTCACATAGAGATAGCTCAGAGAACCTGG
GGGAGGGGCTGACCCCACGTTAGTATTGTGAGAGATGGGGAAAGTGGTGAGCTTCCCCTTCCCA
CACCCCTCAGGGTGGGCTGGCCCCCTACCAGCCAGGTTTGCTGCTTCTCGAGGAGGGCACAGAG
TGACTCTGGGCTCAGCAAGGCAGTGGTGACACTTGTCCAGTGTTGGCTGTCAGCCCAAGCCCAG
GAGAGAGTCTGGCTCCAGAACTCCAGGCCTCTGCCTGGAGAGCTCAGAAGGTAGAGAGGCCTGT
CCCTTCCAGCAAGACTGGATGGAACGCTTAAGGACCTGTGGCGTGCCACGTCTATGGACAGTCC
CGGCTCAGGGGCTATACAGGAGCATAGCCTGGGTGAAATGAGTGGACGAGAGCAGCTGGGGAAG
CATCGGAAAAAACTGCATTGCAAAGGCAGATGGCCAACAGGTTCCTCAGACAGTTTCCTCAGAG
GGCTCGGCTGCCCTTCCCTTAGCAGAGCAAGGCTGACATGAAGGCCATTTGTGTTCCCGAGCCT
GGAGGTTTGCTTTGGCTCTTGGTGGGAGAGGCTTGAGAGGGCGGCTGTGTCCCGCTAGGTGCTC
TCTGGCTTTGTAGTCTCTTCCAATGCACTTCGCCTTATCCCTCAGCCAGCCTGACAGCCTCCCC
TCTCCTGACCAGCACTCAGGTTTGGGAGTGGGTGGTGTGGTGTGGGATTAGGGCAGCCATAGCA
GCCAAGGTGTTGAGTTTTGCAGGATCATACTGCCTTTGGTTCCTCTGGCCTGTGCCCTGTAGCA
ATGGCCCACATCACCTTCCCCTTGGGAAGAGCCCTTCCCCAACACAGCCCTAGACCTGCCTGAA
ACCAGGGGCCATCTGTGAGTGAGCTGGAACAGAGCCTCAGCAGGAGGGCTGCTAGCTCAGCGTC
TAGGGCCCGCCCACAGGGGCTAGTGGTTTTGGTTGAAGGACAGACTGTCCTTTCTCTGGAGAAG
GGTGCAGAACCCTGCTTGCCTGGTCCCCTCTAGTGGAAGCCAAGGGCAGGCAGCATCTGCACAT
GGAGAGTGTGCAAGAGTGGCTCTCCCATCCCAGTCTGGCCAAAGGAGGCCCCGCCCACAGTGCC
CCTGCACCTCCCAAGCCCACCAGCAGTCATGCATTTGGCCTTCTAGATGGAGAGGTGGCCGGGC
AAGACTAAAGGAAGGAAGGAAAGAAGGAAAACAGACTGGTGTTGGGGGTGGGGGGCGCGGGAAA
CGGTTTGGATTTTGTGTGTGTGTTTGTGGGGTTTATTTTTGTGTGTGTGTGTTTTCCATTTTTT
GTAGTTGTCTATAACTCCATAAGTGCTTTTTTTTTTCTTTTTTCTTTTTTCTCTCTTTCTGTCT
TTGAGTAAGTTGCAGGCTTTGGCTTGGAAATCCCCAGGGGGATGAAGGGCAGGACCCTGAGGCT
GCTGCCCCTTTGTCTGCCTTCGTGGTACTGTCCCTTCCCCCAGCTCTTCCTGGACCCCATGAGC
CAGGCCTCAGCCCTTCCAGCTAACCGCTTCCCATGAGCCACTACTCTGATGTCAGCCTATAACC
AAAGGAGCTGGGGGTCCGGGTCTGGTGACCAGCCCTTCTCAGTCCCCTCAATCAGGGTGCTCCC
CACCTGCAGGCAGGAGGCAACACCCTATCTGCTGCCATCAGCCCCTTCCAGAGCCCACCTGTCC
CGCCCAGCCCTGTCCTGCCCTGCCATACCCTGCTCTGCCCCATCTGGGGGTGCTGTGCTCAGGG
ATGGGCCGGCAGGGCTGATCCAGTCTCCCTGGTAAGCAGAGACTCAAGAAAACCTCTGGGGTCC
TGCTTCTGGTCATATGACCCAGGGGGCGGGCCCTTGGGCACCTGTACAGAAGGGACTGGGAGGG
AGGGCCGCACCCTGCAGTCTTGCTCTGCTGGTGTAGCAGGCAGCTCCTCACCCTAACCCCCACC
GCGGGCTCCTGAGTCGGCAGATTAAGCATTTTATAAATTGTATTTTAAATACATGTTTTAAACT
TGTCA

hide sequence

RefSeq Acc Id:

XM_006239264 ⟹ XP_006239326

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	158,701,753 - 158,726,276 (-)	NCBI
mRatBN7.2	5	153,418,748 - 153,443,282 (-)	NCBI
Rnor_6.0	5	159,638,259 - 159,662,789 (-)	NCBI
Rnor_5.0	5	163,350,635 - 163,375,163 (-)	NCBI

Sequence:

show sequence

CAAGGCGCAGGCGCGGGGAGGGGTTGGGGGAGGAGGGAAAGCGGCGAGTAAGATGGAAGATGAG
GAGGTCGCTGAGAGCTGGGAGGAGGCGGCAGACAGCGGGGAAATAGACAGACGGTTGGAAAAAA
AACTGAAGATCACACAAAAGGAGAGGAAATCCAAATCTCCTCCCAAAGTGCCCATTGTGATTCA
AGACGATAGCCTTCCCACGGGGCCCCCTCCACAGATCCGCATCCTCAAGAGGCCCACCAGCAAC
GGTGTGGTCAGCAGCCCCAACTCCACCAGCAGGCCAGCCCTTCCTGTCAAGTCCCTAGCACAGC
GGGAGGCAGAGTACGCAGAGGCTCGGAGACGGATCCTAGGCAGTGCCAGCCCTGAGGAGGAGCA
GGAGAAACCCATCCTCGACAGGCCAACCAGGATCTCCCAACCCGAAGATAGCAGGCAGCCCAGT
AATGTGATCAGACAGCCGTTGGGTCCTGACGGGTCACAAGGCTTCAAACAGCGCAGATAAATGC
AGGCCAGAAAGGCTGCTGCCGCCGCCGCCGCCACCACCACCACCACCGCCTCCTGGATTGTCTG
CCATGGGTCGCACTGCTGTGGCAGACGTCTGGACTTGAGCAGAGGGAATAACCTGACTTACTTG
CACTGTGATCCCCCTTGCTCCGCCCACTGTGACCTTGAACCCCATGCACTGTGACCTCTGCCTC
CCCCCCTTCCCACTGTGATTGGCATGTTGACAAGGGCTGTCCCAAGTCAATAGAAAGGGAAAGG
GTGGGGATTAGGGGAGGATTAGGGGAACCTACCAAGGACTCAGAGTAGAGGGTCAGACAGTGCC
ACTTGGCCGCTTGGGGTAAAGCCAGTGCCAGCAATAACAGTTTATCATGCTCATTAATTTGGGA
TTTCAAAACACAAATGAGAACTCCCCCACCCACCCCAAGTGCATGTCGCCATCACTTAAAGTAA
GTTCCATTGAAAATATCCTTACTTTTTTTTTCTTCCTATTTTTGTTTGTTTAATACAAATACCT
GATTTGCAAGAAAAAGTGCATGGAAGGGGTTTAGCAGTTTAATGAATTTTTAATTGAGAAAGGG
TAGTTTAGTAGTCACTTAAAAGATGTTTCTAGGAAATTTGCTAGAAACATTAACCAATAGGATT
TTGATGAGCTTAGCTTCTGTATTCCTACTGCCACCCAGAAGAGAGGCCGGGCTCGGGAGCCCCC
CATAGATGAGCATCTGTGCCTAAGTCATCTTCCTCCAGCTAAGTCCCAGCTAAGTCACATAGAG
ATAGCTCAGAGAACCTGGGGGAGGGGCTGACCCCACGTTAGTATTGTGAGAGATGGGGAAAGTG
GTGAGCTTCCCCTTCCCACACCCCTCAGGGTGGGCTGGCCCCCTACCAGCCAGGTTTGCTGCTT
CTCGAGGAGGGCACAGAGTGACTCTGGGCTCAGCAAGGCAGTGGTGACACTTGTCCAGTGTTGG
CTGTCAGCCCAAGCCCAGGAGAGAGTCTGGCTCCAGAACTCCAGGCCTCTGCCTGGAGAGCTCA
GAAGGTAGAGAGGCCTGTCCCTTCCAGCAAGACTGGATGGAACGCTTAAGGACCTGTGGCGTGC
CACGTCTATGGACAGTCCCGGCTCAGGGGCTATACAGGAGCATAGCCTGGGTGAAATGAGTGGA
CGAGAGCAGCTGGGGAAGCATCGGAAAAAACTGCATTGCAAAGGCAGATGGCCAACAGGTTCCT
CAGACAGTTTCCTCAGAGGGCTCGGCTGCCCTTCCCTTAGCAGAGCAAGGCTGACATGAAGGCC
ATTTGTGTTCCCGAGCCTGGAGGTTTGCTTTGGCTCTTGGTGGGAGAGGCTTGAGAGGGCGGCT
GTGTCCCGCTAGGTGCTCTCTGGCTTTGTAGTCTCTTCCAATGCACTTCGCCTTATCCCTCAGC
CAGCCTGACAGCCTCCCCTCTCCTGACCAGCACTCAGGTTTGGGAGTGGGTGGTGTGGTGTGGG
ATTAGGGCAGCCATAGCAGCCAAGGTGTTGAGTTTTGCAGGATCATACTGCCTTTGGTTCCTCT
GGCCTGTGCCCTGTAGCAATGGCCCACATCACCTTCCCCTTGGGAAGAGCCCTTCCCCAACACA
GCCCTAGACCTGCCTGAAACCAGGGGCCATCTGTGAGTGAGCTGGAACAGAGCCTCAGCAGGAG
GGCTGCTAGCTCAGCGTCTAGGGCCCGCCCACAGGGGCTAGTGGTTTTGGTTGAAGGACAGACT
GTCCTTTCTCTGGAGAAGGGTGCAGAACCCTGCTTGCCTGGTCCCCTCTAGTGGAAGCCAAGGG
CAGGCAGCATCTGCACATGGAGAGTGTGCAAGAGTGGCTCTCCCATCCCAGTCTGGCCAAAGGA
GGCCCCGCCCACAGTGCCCCTGCACCTCCCAAGCCCACCAGCAGTCATGCATTTGGCCTTCTAG
ATGGAGAGGTGGCCGGGCAAGACTAAAGGAAGGAAGGAAAGAAGGAAAACAGACTGGTGTTGGG
GGTGGGGGGCGCGGGAAACGGTTTGGATTTTGTGTGTGTGTTTGTGGGGTTTATTTTTGTGTGT
GTGTGTTTTCCATTTTTTGTAGTTGTCTATAACTCCATAAGTGCTTTTTTTTTTCTTTTTTCTT
TTTTCTCTCTTTCTGTCTTTGAGTAAGTTGCAGGCTTTGGCTTGGAAATCCCCAGGGGGATGAA
GGGCAGGACCCTGAGGCTGCTGCCCCTTTGTCTGCCTTCGTGGTACTGTCCCTTCCCCCAGCTC
TTCCTGGACCCCATGAGCCAGGCCTCAGCCCTTCCAGCTAACCGCTTCCCATGAGCCACTACTC
TGATGTCAGCCTATAACCAAAGGAGCTGGGGGTCCGGGTCTGGTGACCAGCCCTTCTCAGTCCC
CTCAATCAGGGTGCTCCCCACCTGCAGGCAGGAGGCAACACCCTATCTGCTGCCATCAGCCCCT
TCCAGAGCCCACCTGTCCCGCCCAGCCCTGTCCTGCCCTGCCATACCCTGCTCTGCCCCATCTG
GGGGTGCTGTGCTCAGGGATGGGCCGGCAGGGCTGATCCAGTCTCCCTGGTAAGCAGAGACTCA
AGAAAACCTCTGGGGTCCTGCTTCTGGTCATATGACCCAGGGGGCGGGCCCTTGGGCACCTGTA
CAGAAGGGACTGGGAGGGAGGGCCGCACCCTGCAGTCTTGCTCTGCTGGTGTAGCAGGCAGCTC
CTCACCCTAACCCCCACCGCGGGCTCCTGAGTCGGCAGATTAAGCATTTTATAAATTGTATTTT
AAATACATGTTTTAAACTTGTCA

hide sequence

RefSeq Acc Id:

XR_354339

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	158,704,600 - 158,726,273 (-)	NCBI
mRatBN7.2	5	153,418,748 - 153,443,286 (-)	NCBI
Rnor_6.0	5	159,638,259 - 159,662,790 (-)	NCBI
Rnor_5.0	5	163,350,635 - 163,375,163 (-)	NCBI

Sequence:

show sequence

TCAAGGCGCAGGCGCGGGGAGGGGTTGGGGGAGGAGGGAAAGCGGCGAGTAAGATGGAAGATGA
GGAGGTCGCTGAGAGCTGGGAGGAGGCGGCAGACAGCGGGGAAATAGACAGACGGTTGGAAAAA
AAACTGAAGATCACACAAAAGGAGAGCAGGAAATCCAAATCTCCTCCCAAAGTGCCCATTGTGA
TTCAAGACGATAGCCTTCCCACGGGGCCCCCTCCACAGATCCGCATCCTCAAGAGGCCCACCAG
CAACGGTGTGGTCAGCAGCCCCAACTCCACCAGCAGGCCAGCCCTTCCTGTCAAGTCCCTAGCA
CAGCGGGAGGCAGAGTACGCAGAGGCTCGGAGACGGATCCTAGGCAGTGCCAGCCCTGAGGAGG
AGCAGGAGAAACCCATCCTCGACAGTCTGCACCTGTCTGGAGTGGGAAAGTCCATCTCCTTCTG
TCTTCTCTAGTACTAGGAGTCAGCAGCTAGCCTCGTGGTTTGGAGGGAAACAGGAGTCAGCCAG
GCCAACCAGGATCTCCCAACCCGAAGATAGCAGGCAGCCCAGTAATGTGATCAGACAGCCGTTG
GGTCCTGACGGGTCACAAGGCTTCAAACAGCGCAGATAAATGCAGGCCAGAAAGGCTGCTGCCG
CCGCCGCCGCCACCACCACCACCACCGCCTCCTGGATTGTCTGCCATGGGTCGCACTGCTGTGG
CAGACGTCTGGACTTGAGCAGAGGGAATAACCTGACTTACTTGCACTGTGATCCCCCTTGCTCC
GCCCACTGTGACCTTGAACCCCATGCACTGTGACCTCTGCCTCCCCCCCTTCCCACTGTGATTG
GCATGTTGACAAGGGCTGTCCCAAGTCAATAGAAAGGGAAAGGGTGGGGATTAGGGGAGGATTA
GGGGAACCTACCAAGGACTCAGAGTAGAGGGTCAGACAGTGCCACTTGGCCGCTTGGGGTAAAG
CCAGTGCCAGCAATAACAGTTTATCATGCTCATTAATTTGGGATTTCAAAACACAAATGAGAAC
TCCCCCACCCACCCCAAGTGCATGTCGCCATCACTTAAAGTAAGTTCCATTGAAAATATCCTTA
CTTTTTTTTTCTTCCTATTTTTGTTTGTTTAATACAAATACCTGATTTGCAAGAAAAAGTGCAT
GGAAGGGGTTTAGCAGTTTAATGAATTTTTAATTGAGAAAGGGTAGTTTAGTAGTCACTTAAAA
GATGTTTCTAGGAAATTTGCTAGAAACATTAACCAATAGGATTTTGATGAGCTTAGCTTCTGTA
TTCCTACTGCCACCCAGAAGAGAGGCCGGGCTCGGGAGCCCCCCATAGATGAGCATCTGTGCCT
AAGTCATCTTCCTCCAGCTAAGTCCCAGCTAAGTCACATAGAGATAGCTCAGAGAACCTGGGGG
AGGGGCTGACCCCACGTTAGTATTGTGAGAGATGGGGAAAGTGGTGAGCTTCCCCTTCCCACAC
CCCTCAGGGTGGGCTGGCCCCCTACCAGCCAGGTTTGCTGCTTCTCGAGGAGGGCACAGAGTGA
CTCTGGGCTCAGCAAGGCAGTGGTGACACTTGTCCAGTGTTGGCTGTCAGCCCAAGCCCAGGAG
AGAGTCTGGCTCCAGAACTCCAGGCCTCTGCCTGGAGAGCTCAGAAGGTAGAGAGGCCTGTCCC
TTCCAGCAAGACTGGATGGAACGCTTAAGGACCTGTGGCGTGCCACGTCTATGGACAGTCCCGG
CTCAGGGGCTATACAGGAGCATAGCCTGGGTGAAATGAGTGGACGAGAGCAGCTGGGGAAGCAT
CGGAAAAAACTGCATTGCAAAGGCAGATGGCCAACAGGTTCCTCAGACAGTTTCCTCAGAGGGC
TCGGCTGCCCTTCCCTTAGCAGAGCAAGGCTGACATGAAGGCCATTTGTGTTCCCGAGCCTGGA
GGTTTGCTTTGGCTCTTGGTGGGAGAGGCTTGAGAGGGCGGCTGTGTCCCGCTAGGTGCTCTCT
GGCTTTGTAGTCTCTTCCAATGCACTTCGCCTTATCCCTCAGCCAGCCTGACAGCCTCCCCTCT
CCTGACCAGCACTCAGGTTTGGGAGTGGGTGGTGTGGTGTGGGATTAGGGCAGCCATAGCAGCC
AAGGTGTTGAGTTTTGCAGGATCATACTGCCTTTGGTTCCTCTGGCCTGTGCCCTGTAGCAATG
GCCCACATCACCTTCCCCTTGGGAAGAGCCCTTCCCCAACACAGCCCTAGACCTGCCTGAAACC
AGGGGCCATCTGTGAGTGAGCTGGAACAGAGCCTCAGCAGGAGGGCTGCTAGCTCAGCGTCTAG
GGCCCGCCCACAGGGGCTAGTGGTTTTGGTTGAAGGACAGACTGTCCTTTCTCTGGAGAAGGGT
GCAGAACCCTGCTTGCCTGGTCCCCTCTAGTGGAAGCCAAGGGCAGGCAGCATCTGCACATGGA
GAGTGTGCAAGAGTGGCTCTCCCATCCCAGTCTGGCCAAAGGAGGCCCCGCCCACAGTGCCCCT
GCACCTCCCAAGCCCACCAGCAGTCATGCATTTGGCCTTCTAGATGGAGAGGTGGCCGGGCAAG
ACTAAAGGAAGGAAGGAAAGAAGGAAAACAGACTGGTGTTGGGGGTGGGGGGCGCGGGAAACGG
TTTGGATTTTGTGTGTGTGTTTGTGGGGTTTATTTTTGTGTGTGTGTGTTTTCCATTTTTTGTA
GTTGTCTATAACTCCATAAGTGCTTTTTTTTTTCTTTTTTCTTTTTTCTCTCTTTCTGTCTTTG
AGTAAGTTGCAGGCTTTGGCTTGGAAATCCCCAGGGGGATGAAGGGCAGGACCCTGAGGCTGCT
GCCCCTTTGTCTGCCTTCGTGGTACTGTCCCTTCCCCCAGCTCTTCCTGGACCCCATGAGCCAG
GCCTCAGCCCTTCCAGCTAACCGCTTCCCATGAGCCACTACTCTGATGTCAGCCTATAACCAAA
GGAGCTGGGGGTCCGGGTCTGGTGACCAGCCCTTCTCAGTCCCCTCAATCAGGGTGCTCCCCAC
CTGCAGGCAGGAGGCAACACCCTATCTGCTGCCATCAGCCCCTTCCAGAGCCCACCTGTCCCGC
CCAGCCCTGTCCTGCCCTGCCATACCCTGCTCTGCCCCATCTGGGGGTGCTGTGCTCAGGGATG
GGCCGGCAGGGCTGATCCAGTCTCCCTGGTAAGCAGAGACTCAAGAAAACCTCTGGGGTCCTGC
TTCTGGTCATATGACCCAGGGGGCGGGCCCTTGGGCACCTGTACAGAAGGGACTGGGAGGGAGG
GCCGCACCCTGCAGTCTTGCTCTGCTGGTGTAGCAGGCAGCTCCTCACCCTAACCCCCACCGCG
GGCTCCTGAGTCGGCAGATTAAGCATTTTATAAATTGTATTTTAAATACATGTTTTAAACTTGT
CA

hide sequence

RefSeq Acc Id:

XR_354340

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	158,704,596 - 158,726,273 (-)	NCBI
mRatBN7.2	5	153,418,748 - 153,443,285 (-)	NCBI
Rnor_6.0	5	159,638,259 - 159,662,790 (-)	NCBI
Rnor_5.0	5	163,350,635 - 163,375,163 (-)	NCBI

Sequence:

show sequence

TCAAGGCGCAGGCGCGGGGAGGGGTTGGGGGAGGAGGGAAAGCGGCGAGTAAGATGGAAGATGA
GGAGGTCGCTGAGAGCTGGGAGGAGGCGGCAGACAGCGGGGAAATAGACAGACGGTTGGAAAAA
AAACTGAAGATCACACAAAAGGAGAGGAAATCCAAATCTCCTCCCAAAGTGCCCATTGTGATTC
AAGACGATAGCCTTCCCACGGGGCCCCCTCCACAGATCCGCATCCTCAAGAGGCCCACCAGCAA
CGGTGTGGTCAGCAGCCCCAACTCCACCAGCAGGCCAGCCCTTCCTGTCAAGTCCCTAGCACAG
CGGGAGGCAGAGTACGCAGAGGCTCGGAGACGGATCCTAGGCAGTGCCAGCCCTGAGGAGGAGC
AGGAGAAACCCATCCTCGACAGTCTGCACCTGTCTGGAGTGGGAAAGTCCATCTCCTTCTGTCT
TCTCTAGTACTAGGAGTCAGCAGCTAGCCTCGTGGTTTGGAGGGAAACAGGAGTCAGCCAGGCC
AACCAGGATCTCCCAACCCGAAGATAGCAGGCAGCCCAGTAATGTGATCAGACAGCCGTTGGGT
CCTGACGGGTCACAAGGCTTCAAACAGCGCAGATAAATGCAGGCCAGAAAGGCTGCTGCCGCCG
CCGCCGCCACCACCACCACCACCGCCTCCTGGATTGTCTGCCATGGGTCGCACTGCTGTGGCAG
ACGTCTGGACTTGAGCAGAGGGAATAACCTGACTTACTTGCACTGTGATCCCCCTTGCTCCGCC
CACTGTGACCTTGAACCCCATGCACTGTGACCTCTGCCTCCCCCCCTTCCCACTGTGATTGGCA
TGTTGACAAGGGCTGTCCCAAGTCAATAGAAAGGGAAAGGGTGGGGATTAGGGGAGGATTAGGG
GAACCTACCAAGGACTCAGAGTAGAGGGTCAGACAGTGCCACTTGGCCGCTTGGGGTAAAGCCA
GTGCCAGCAATAACAGTTTATCATGCTCATTAATTTGGGATTTCAAAACACAAATGAGAACTCC
CCCACCCACCCCAAGTGCATGTCGCCATCACTTAAAGTAAGTTCCATTGAAAATATCCTTACTT
TTTTTTTCTTCCTATTTTTGTTTGTTTAATACAAATACCTGATTTGCAAGAAAAAGTGCATGGA
AGGGGTTTAGCAGTTTAATGAATTTTTAATTGAGAAAGGGTAGTTTAGTAGTCACTTAAAAGAT
GTTTCTAGGAAATTTGCTAGAAACATTAACCAATAGGATTTTGATGAGCTTAGCTTCTGTATTC
CTACTGCCACCCAGAAGAGAGGCCGGGCTCGGGAGCCCCCCATAGATGAGCATCTGTGCCTAAG
TCATCTTCCTCCAGCTAAGTCCCAGCTAAGTCACATAGAGATAGCTCAGAGAACCTGGGGGAGG
GGCTGACCCCACGTTAGTATTGTGAGAGATGGGGAAAGTGGTGAGCTTCCCCTTCCCACACCCC
TCAGGGTGGGCTGGCCCCCTACCAGCCAGGTTTGCTGCTTCTCGAGGAGGGCACAGAGTGACTC
TGGGCTCAGCAAGGCAGTGGTGACACTTGTCCAGTGTTGGCTGTCAGCCCAAGCCCAGGAGAGA
GTCTGGCTCCAGAACTCCAGGCCTCTGCCTGGAGAGCTCAGAAGGTAGAGAGGCCTGTCCCTTC
CAGCAAGACTGGATGGAACGCTTAAGGACCTGTGGCGTGCCACGTCTATGGACAGTCCCGGCTC
AGGGGCTATACAGGAGCATAGCCTGGGTGAAATGAGTGGACGAGAGCAGCTGGGGAAGCATCGG
AAAAAACTGCATTGCAAAGGCAGATGGCCAACAGGTTCCTCAGACAGTTTCCTCAGAGGGCTCG
GCTGCCCTTCCCTTAGCAGAGCAAGGCTGACATGAAGGCCATTTGTGTTCCCGAGCCTGGAGGT
TTGCTTTGGCTCTTGGTGGGAGAGGCTTGAGAGGGCGGCTGTGTCCCGCTAGGTGCTCTCTGGC
TTTGTAGTCTCTTCCAATGCACTTCGCCTTATCCCTCAGCCAGCCTGACAGCCTCCCCTCTCCT
GACCAGCACTCAGGTTTGGGAGTGGGTGGTGTGGTGTGGGATTAGGGCAGCCATAGCAGCCAAG
GTGTTGAGTTTTGCAGGATCATACTGCCTTTGGTTCCTCTGGCCTGTGCCCTGTAGCAATGGCC
CACATCACCTTCCCCTTGGGAAGAGCCCTTCCCCAACACAGCCCTAGACCTGCCTGAAACCAGG
GGCCATCTGTGAGTGAGCTGGAACAGAGCCTCAGCAGGAGGGCTGCTAGCTCAGCGTCTAGGGC
CCGCCCACAGGGGCTAGTGGTTTTGGTTGAAGGACAGACTGTCCTTTCTCTGGAGAAGGGTGCA
GAACCCTGCTTGCCTGGTCCCCTCTAGTGGAAGCCAAGGGCAGGCAGCATCTGCACATGGAGAG
TGTGCAAGAGTGGCTCTCCCATCCCAGTCTGGCCAAAGGAGGCCCCGCCCACAGTGCCCCTGCA
CCTCCCAAGCCCACCAGCAGTCATGCATTTGGCCTTCTAGATGGAGAGGTGGCCGGGCAAGACT
AAAGGAAGGAAGGAAAGAAGGAAAACAGACTGGTGTTGGGGGTGGGGGGCGCGGGAAACGGTTT
GGATTTTGTGTGTGTGTTTGTGGGGTTTATTTTTGTGTGTGTGTGTTTTCCATTTTTTGTAGTT
GTCTATAACTCCATAAGTGCTTTTTTTTTTCTTTTTTCTTTTTTCTCTCTTTCTGTCTTTGAGT
AAGTTGCAGGCTTTGGCTTGGAAATCCCCAGGGGGATGAAGGGCAGGACCCTGAGGCTGCTGCC
CCTTTGTCTGCCTTCGTGGTACTGTCCCTTCCCCCAGCTCTTCCTGGACCCCATGAGCCAGGCC
TCAGCCCTTCCAGCTAACCGCTTCCCATGAGCCACTACTCTGATGTCAGCCTATAACCAAAGGA
GCTGGGGGTCCGGGTCTGGTGACCAGCCCTTCTCAGTCCCCTCAATCAGGGTGCTCCCCACCTG
CAGGCAGGAGGCAACACCCTATCTGCTGCCATCAGCCCCTTCCAGAGCCCACCTGTCCCGCCCA
GCCCTGTCCTGCCCTGCCATACCCTGCTCTGCCCCATCTGGGGGTGCTGTGCTCAGGGATGGGC
CGGCAGGGCTGATCCAGTCTCCCTGGTAAGCAGAGACTCAAGAAAACCTCTGGGGTCCTGCTTC
TGGTCATATGACCCAGGGGGCGGGCCCTTGGGCACCTGTACAGAAGGGACTGGGAGGGAGGGCC
GCACCCTGCAGTCTTGCTCTGCTGGTGTAGCAGGCAGCTCCTCACCCTAACCCCCACCGCGGGC
TCCTGAGTCGGCAGATTAAGCATTTTATAAATTGTATTTTAAATACATGTTTTAAACTTGTCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001108071	(Get FASTA)	NCBI Sequence Viewer
	XP_006239326	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH83784	(Get FASTA)	NCBI Sequence Viewer
	EDL80966	(Get FASTA)	NCBI Sequence Viewer
	EDL80967	(Get FASTA)	NCBI Sequence Viewer
	EDL80968	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000048348
	ENSRNOP00000048348.3
GenBank Protein	Q5XIA2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001108071 ⟸ NM_001114599
- UniProtKB:	Q5XIA2 (UniProtKB/Swiss-Prot), A6ITR5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEDEEVAESWEEAADSGEIDRRLEKKLKITQKESRKSKSPPKVPIVIQDDSLPTGPPPQIRILK RPTSNGVVSSPNSTSRPALPVKSLAQREAEYAEARRRILGSASPEEEQEKPILDRPTRISQPED SRQPSNVIRQPLGPDGSQGFKQRR hide sequence

RefSeq Acc Id:	XP_006239326 ⟸ XM_006239264
- Peptide Label:	isoform X1
- Sequence:	show sequence MEDEEVAESWEEAADSGEIDRRLEKKLKITQKERKSKSPPKVPIVIQDDSLPTGPPPQIRILKR PTSNGVVSSPNSTSRPALPVKSLAQREAEYAEARRRILGSASPEEEQEKPILDRPTRISQPEDS RQPSNVIRQPLGPDGSQGFKQRR hide sequence

Ensembl Acc Id:

ENSRNOP00000048348 ⟸ ENSRNOT00000045226

Ensembl Acc Id:

ENSRNOP00000077933 ⟸ ENSRNOT00000095397

Ensembl Acc Id:

ENSRNOP00000092111 ⟸ ENSRNOT00000102771

Protein Domains

SUZ SUZ-C

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5XIA2-F1-model_v2	AlphaFold	Q5XIA2	1-152	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694220

Promoter ID:

EPDNEW_R4745

Type:

single initiation site

Name:

Szrd1_1

Description:

SUZ RNA binding domain containing 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	159,662,753 - 159,662,813	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1560286	AgrOrtholog
BioCyc Gene	G2FUF-39362	BioCyc
Ensembl Genes	ENSRNOG00000009183	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000045226	ENTREZGENE
	ENSRNOT00000045226.6	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7096594	IMAGE-MGC_LOAD
InterPro	SUZ	UniProtKB/Swiss-Prot
	SUZ-C	UniProtKB/Swiss-Prot
	SZRD1	UniProtKB/Swiss-Prot
KEGG Report	rno:500575	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:94759	IMAGE-MGC_LOAD
NCBI Gene	500575	ENTREZGENE
PANTHER	PTHR31796	UniProtKB/Swiss-Prot
	SUZ DOMAIN-CONTAINING PROTEIN 1	UniProtKB/Swiss-Prot
Pfam	SUZ	UniProtKB/Swiss-Prot
	SUZ-C	UniProtKB/Swiss-Prot
PhenoGen	Szrd1	PhenoGen
PROSITE	SUZ	UniProtKB/Swiss-Prot
	SUZ_C	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000009183	RatGTEx
UniProt	A0A8I5Y6W2_RAT	UniProtKB/TrEMBL
	A6ITR5	ENTREZGENE, UniProtKB/TrEMBL
	Q5XIA2	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-10-11	Szrd1	SUZ RNA binding domain containing 1	RGD1560286	similar to DNA segment, Chr 4, ERATO Doi 22, expressed	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1560286	similar to DNA segment, Chr 4, ERATO Doi 22, expressed	RGD1560286_predicted	similar to DNA segment, Chr 4, ERATO Doi 22, expressed (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1560286_predicted	similar to DNA segment, Chr 4, ERATO Doi 22, expressed (predicted)	LOC500575	similar to DNA segment, Chr 4, ERATO Doi 22, expressed	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC500575	similar to DNA segment, Chr 4, ERATO Doi 22, expressed			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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