Upf3b (UPF3B, regulator of nonsense mediated mRNA decay) - Rat Genome Database

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Gene: Upf3b (UPF3B, regulator of nonsense mediated mRNA decay) Rattus norvegicus
Analyze
Symbol: Upf3b
Name: UPF3B, regulator of nonsense mediated mRNA decay
RGD ID: 1560264
Description: Predicted to enable mRNA binding activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay and positive regulation of translation. Predicted to act upstream of or within positive regulation of mRNA cis splicing, via spliceosome and random inactivation of X chromosome. Predicted to be located in neuronal cell body and nucleus. Predicted to be part of exon-exon junction complex. Predicted to be active in cytoplasm and nucleolus. Human ortholog(s) of this gene implicated in syndromic X-linked intellectual disability 14. Orthologous to human UPF3B (UPF3B regulator of nonsense mediated mRNA decay); PARTICIPATES IN mRNA decay pathway; RNA transport pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC313449; regulator of nonsense transcripts 3B; RGD1560264; similar to UPF3 regulator of nonsense transcripts homolog B isoform 2; UPF3 regulator of nonsense transcripts homolog B; UPF3 regulator of nonsense transcripts homolog B (yeast)
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X121,200,993 - 121,219,059 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 EnsemblX121,200,993 - 121,218,921 (-)EnsemblGRCr8
mRatBN7.2X116,335,308 - 116,353,332 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX116,335,308 - 116,353,236 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_UtxX118,438,851 - 118,456,789 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X122,007,993 - 122,025,929 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X119,553,931 - 119,571,856 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X123,713,327 - 123,731,431 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX123,713,339 - 123,731,385 (-)Ensemblrn6Rnor6.0
Rnor_5.0X123,849,755 - 123,867,703 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4X7,801,655 - 7,819,849 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
CeleraX115,562,637 - 115,580,545 (-)NCBICelera
Cytogenetic MapXq35NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,IEA)
cytosol  (ISO)
exon-exon junction complex  (IEA,ISO)
neuronal cell body  (IEA,ISO)
nucleolus  (IBA,ISO)
nucleoplasm  (ISO)
nucleus  (IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11546873   PMID:12718880   PMID:16601204   PMID:18369367   PMID:22658674   PMID:22681889  


Genomics

Comparative Map Data
Upf3b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X121,200,993 - 121,219,059 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 EnsemblX121,200,993 - 121,218,921 (-)EnsemblGRCr8
mRatBN7.2X116,335,308 - 116,353,332 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX116,335,308 - 116,353,236 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_UtxX118,438,851 - 118,456,789 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X122,007,993 - 122,025,929 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X119,553,931 - 119,571,856 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X123,713,327 - 123,731,431 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX123,713,339 - 123,731,385 (-)Ensemblrn6Rnor6.0
Rnor_5.0X123,849,755 - 123,867,703 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4X7,801,655 - 7,819,849 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
CeleraX115,562,637 - 115,580,545 (-)NCBICelera
Cytogenetic MapXq35NCBI
UPF3B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X119,805,311 - 119,852,963 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX119,833,808 - 119,853,083 (-)Ensemblhg38GRCh38
GRCh37X118,967,985 - 118,986,926 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X118,852,017 - 118,870,996 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34X118,749,870 - 118,768,850NCBI
CeleraX119,422,616 - 119,441,635 (-)NCBICelera
Cytogenetic MapXq24NCBI
HuRefX108,461,263 - 108,479,939 (-)NCBIHuRef
CHM1_1X118,879,087 - 118,898,087 (-)NCBICHM1_1
T2T-CHM13v2.0X118,180,438 - 118,228,084 (-)NCBIT2T-CHM13v2.0
Upf3b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X36,355,331 - 36,374,124 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX36,355,331 - 36,373,975 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38X37,091,678 - 37,110,471 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX37,091,678 - 37,110,322 (-)Ensemblmm10GRCm38
MGSCv37X34,631,829 - 34,650,317 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36X33,523,279 - 33,541,767 (-)NCBIMGSCv36mm8
CeleraX23,815,464 - 23,833,952 (-)NCBICelera
Cytogenetic MapXA3.3NCBI
cM MapX21.51NCBI
Upf3b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955534176,522 - 193,319 (+)Ensembl
ChiLan1.0NW_004955534176,553 - 193,033 (+)NCBIChiLan1.0ChiLan1.0
UPF3B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X119,241,408 - 119,260,919 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X119,245,012 - 119,264,507 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X108,897,140 - 108,916,620 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X119,292,231 - 119,311,632 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX119,292,231 - 119,311,632 (-)EnsemblpanPan2panpan1.1
UPF3B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X91,835,845 - 91,851,755 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX91,836,727 - 91,851,640 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_TashaX77,910,224 - 77,926,190 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
UMICH_Zoey_3.1X91,027,322 - 91,043,287 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X92,787,502 - 92,803,460 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X92,515,688 - 92,531,655 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Upf3b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X90,876,197 - 90,894,205 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647910,093,290 - 10,111,752 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647910,093,290 - 10,111,293 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UPF3B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX98,182,272 - 98,206,096 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1X98,184,646 - 98,206,135 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X113,406,198 - 113,427,250 (+)NCBISscrofa10.2Sscrofa10.2susScr3
UPF3B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_02366606532,620,407 - 32,638,733 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Upf3b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248953,762,087 - 3,781,662 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Upf3b
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1X103,275,236 - 103,293,305 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Upf3b
108 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:368
Count of miRNA genes:231
Interacting mature miRNAs:264
Transcripts:ENSRNOT00000032618
Prediction methods:Microtar, Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X97528096142528096Rat
1598856Memor1Memory QTL 11.9exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)X120028026141353710Rat
1598809Memor15Memory QTL 154.4exploratory behavior trait (VT:0010471)difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X120028026141353710Rat
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX105359969157758123Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X80434318125434318Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X105468858125434318Rat
10059603Bw174Body weight QTL 1743.40.025body mass (VT:0001259)body weight (CMO:0000012)X118973754157758123Rat
2302047Pia34Pristane induced arthritis QTL 345.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)1996916163141916163Rat

Markers in Region
RH134263  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X116,335,393 - 116,335,603 (+)MAPPERmRatBN7.2
Rnor_6.0X123,713,413 - 123,713,622NCBIRnor6.0
Rnor_5.0X123,849,841 - 123,850,050UniSTSRnor5.0
RGSC_v3.4X7,819,554 - 7,819,763UniSTSRGSC3.4
CeleraX115,562,723 - 115,562,932UniSTS
Cytogenetic MapXq12UniSTS
BE117640  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X116,339,316 - 116,339,486 (+)MAPPERmRatBN7.2
Rnor_6.0X123,717,336 - 123,717,505NCBIRnor6.0
Rnor_5.0X123,853,764 - 123,853,933UniSTSRnor5.0
RGSC_v3.4X7,815,671 - 7,815,840UniSTSRGSC3.4
CeleraX115,566,646 - 115,566,815UniSTS
Cytogenetic MapXq12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000032618   ⟹   ENSRNOP00000029696
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblX121,200,993 - 121,218,921 (-)Ensembl
mRatBN7.2 EnsemblX116,335,308 - 116,353,236 (-)Ensembl
Rnor_6.0 EnsemblX123,713,339 - 123,731,385 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000092284
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 EnsemblX123,720,590 - 123,725,565 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000092364
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 EnsemblX123,717,163 - 123,717,569 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000092391
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 EnsemblX123,719,907 - 123,731,366 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000092574   ⟹   ENSRNOP00000075758
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblX121,200,993 - 121,218,921 (-)Ensembl
mRatBN7.2 EnsemblX116,335,308 - 116,353,236 (-)Ensembl
Rnor_6.0 EnsemblX123,714,060 - 123,731,294 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000092588
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 EnsemblX123,713,856 - 123,715,181 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000092703
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 EnsemblX123,729,207 - 123,730,006 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000146319   ⟹   ENSRNOP00000103976
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblX121,200,993 - 121,218,921 (-)Ensembl
RefSeq Acc Id: NM_001135873   ⟹   NP_001129345
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X121,200,993 - 121,218,921 (-)NCBI
mRatBN7.2X116,335,308 - 116,353,236 (-)NCBI
Rnor_6.0X123,713,327 - 123,731,403 (-)NCBI
Rnor_5.0X123,849,755 - 123,867,703 (-)NCBI
RGSC_v3.4X7,801,655 - 7,819,849 (+)RGD
CeleraX115,562,637 - 115,580,545 (-)RGD
Sequence:
RefSeq Acc Id: XM_006257455   ⟹   XP_006257517
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X121,201,000 - 121,219,059 (-)NCBI
mRatBN7.2X116,335,315 - 116,353,332 (-)NCBI
Rnor_6.0X123,713,334 - 123,731,431 (-)NCBI
Rnor_5.0X123,849,755 - 123,867,703 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017602038   ⟹   XP_017457527
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X121,201,000 - 121,219,059 (-)NCBI
mRatBN7.2X116,335,315 - 116,353,332 (-)NCBI
Rnor_6.0X123,713,334 - 123,731,431 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063279990   ⟹   XP_063136060
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X121,201,000 - 121,219,059 (-)NCBI
RefSeq Acc Id: XM_063279991   ⟹   XP_063136061
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X121,204,934 - 121,219,059 (-)NCBI
RefSeq Acc Id: NP_001129345   ⟸   NM_001135873
- UniProtKB: D3ZBE8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006257517   ⟸   XM_006257455
- Peptide Label: isoform X1
- UniProtKB: A0A0U1RRP3 (UniProtKB/TrEMBL),   A6JMH6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017457527   ⟸   XM_017602038
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSRNOP00000075758   ⟸   ENSRNOT00000092574
Ensembl Acc Id: ENSRNOP00000029696   ⟸   ENSRNOT00000032618
RefSeq Acc Id: XP_063136060   ⟸   XM_063279990
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063136061   ⟸   XM_063279991
- Peptide Label: isoform X4
Ensembl Acc Id: ENSRNOP00000103976   ⟸   ENSRNOT00000146319
Protein Domains
UPF3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0U1RRP3-F1-model_v2 AlphaFold A0A0U1RRP3 1-485 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13701990
Promoter ID:EPDNEW_R12511
Type:initiation region
Name:Upf3b_1
Description:UPF3B, regulator of nonsense mediated mRNA decay
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0X123,731,333 - 123,731,393EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1560264 AgrOrtholog
BioCyc Gene G2FUF-1296 BioCyc
Ensembl Genes ENSRNOG00000039994 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000032618 ENTREZGENE
  ENSRNOT00000032618.7 UniProtKB/TrEMBL
  ENSRNOT00000092574 ENTREZGENE
  ENSRNOT00000092574.3 UniProtKB/TrEMBL
  ENSRNOT00000146319.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.330 UniProtKB/TrEMBL
InterPro Nonsense_mediated_decay_UPF3 UniProtKB/TrEMBL
  Nucleotide-bd_a/b_plait_sf UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/TrEMBL
  Upf3 UniProtKB/TrEMBL
  UPF3B_RRM_like_Smg4 UniProtKB/TrEMBL
KEGG Report rno:313449 UniProtKB/TrEMBL
NCBI Gene 313449 ENTREZGENE
PANTHER PTHR13112 UniProtKB/TrEMBL
  REGULATOR OF NONSENSE TRANSCRIPTS 3B UniProtKB/TrEMBL
Pfam Smg4_UPF3 UniProtKB/TrEMBL
PhenoGen Upf3b PhenoGen
PROSITE PROKAR_LIPOPROTEIN UniProtKB/TrEMBL
RatGTEx ENSRNOG00000039994 RatGTEx
Superfamily-SCOP SSF54928 UniProtKB/TrEMBL
UniProt A0A0U1RRP3 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L3X8_RAT UniProtKB/TrEMBL
  A6JMH6 ENTREZGENE, UniProtKB/TrEMBL
  D3ZBE8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-05-24 Upf3b  UPF3B, regulator of nonsense mediated mRNA decay  Upf3b  UPF3 regulator of nonsense transcripts homolog B  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2017-05-18 Upf3b  UPF3 regulator of nonsense transcripts homolog B  Upf3b  UPF3 regulator of nonsense transcripts homolog B (yeast)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Upf3b  UPF3 regulator of nonsense transcripts homolog B (yeast)   Upf3b_predicted  UPF3 regulator of nonsense transcripts homolog B (yeast) (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Upf3b_predicted  UPF3 regulator of nonsense transcripts homolog B (yeast) (predicted)  RGD1560264_predicted  similar to UPF3 regulator of nonsense transcripts homolog B isoform 2 (predicted)  Symbol and Name updated 1299863 APPROVED
2006-03-07 RGD1560264_predicted  similar to UPF3 regulator of nonsense transcripts homolog B isoform 2 (predicted)  LOC313449  similar to UPF3 regulator of nonsense transcripts homolog B isoform 2  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC313449  similar to UPF3 regulator of nonsense transcripts homolog B isoform 2      Symbol and Name status set to provisional 70820 PROVISIONAL