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Gene: Fmnl2 (formin-like 2) Rattus norvegicus

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Symbol:

Fmnl2

Name:

formin-like 2

RGD ID:

1560248

Description:

Predicted to enable actin filament binding activity. Predicted to be involved in cell migration; cortical actin cytoskeleton organization; and regulation of cell shape. Predicted to be active in cytosol. Orthologous to human FMNL2 (formin like 2); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-diaminodiphenylmethane.

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

formin-like protein 2; LOC499797; RGD1560248; similar to formin-like 2 isoform B

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FMNL2 (formin like 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther
Mus musculus (house mouse):	Fmnl2 (formin-like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Fmnl2 (formin like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	FMNL2 (formin like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	LOC476151 (formin-like protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Fmnl2 (formin like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FMNL2 (formin like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FMNL2 (formin like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Fmnl2 (formin like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Fmnl2 (formin like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	RMI1 (RecQ mediated genome instability 1)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	FMNL2 (formin like 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Fmnl2 (formin-like 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	fmnl2a (formin-like 2a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	fmnl2b (formin-like 2b)	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	Frl	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Frl	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	fozi-1	Alliance	DIOPT (PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	fmnl2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	fmnl2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	57,758,236 - 58,033,832 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	57,758,191 - 58,033,831 (+)	Ensembl				GRCr8
mRatBN7.2	3	37,348,791 - 37,624,746 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	37,348,574 - 37,624,754 (+)	Ensembl				mRatBN7.2
Rnor_6.0	3	38,400,409 - 38,677,637 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	38,559,914 - 38,675,878 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	43,498,605 - 43,774,803 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	34,371,529 - 34,655,033 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	35,487,885 - 35,763,621 (+)	NCBI		Celera
Cytogenetic Map	3	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Crohn's disease (ISO)

Experimental Liver Cirrhosis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

1-naphthyl isothiocyanate (EXP)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,4,6-tribromophenol (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

CGP 52608 (ISO)

chloroprene (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

clobetasol (ISO)

coumestrol (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

decabromodiphenyl ether (ISO)

dexamethasone (ISO)

diuron (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

ethanol (ISO)

folic acid (ISO)

FR900359 (ISO)

fulvestrant (ISO)

heptachlor (EXP)

indometacin (ISO)

ivermectin (ISO)

leflunomide (ISO)

methapyrilene (ISO)

methoxychlor (EXP)

N-nitrosodimethylamine (EXP)

okadaic acid (ISO)

oxaliplatin (EXP)

ozone (ISO)

paracetamol (ISO)

PD 0325901 (ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

propiconazole (ISO)

resveratrol (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

tetrachloromethane (ISO)

thimerosal (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

topotecan (EXP)

trichostatin A (ISO)

troglitazone (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin cytoskeleton organization (IEA)

cell migration (IBA)

cortical actin cytoskeleton organization (IBA)

cytoskeleton organization (IEA)

regulation of cell morphogenesis (IEA)

regulation of cell shape (IBA)

Cellular Component

cytosol (IBA)

glutamatergic synapse (IDA,IMP)

postsynapse (IDA,IMP)

Molecular Function

actin binding (IEA)

actin filament binding (IBA)

GTPase activating protein binding (IEA)

small GTPase binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Nanoscale segregation of actin nucleation and elongation factors determines dendritic spine protrusion.	Chazeau A, etal., EMBO J. 2014 Dec 1;33(23):2745-64. doi: 10.15252/embj.201488837. Epub 2014 Oct 7.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	GOA pipeline	RGD automated data pipeline
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:21834987	PMID:25468996	PMID:25931508	PMID:28131823

Genomics

Comparative Map Data

Fmnl2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	57,758,236 - 58,033,832 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	57,758,191 - 58,033,831 (+)	Ensembl				GRCr8
mRatBN7.2	3	37,348,791 - 37,624,746 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	37,348,574 - 37,624,754 (+)	Ensembl				mRatBN7.2
Rnor_6.0	3	38,400,409 - 38,677,637 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	38,559,914 - 38,675,878 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	43,498,605 - 43,774,803 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	34,371,529 - 34,655,033 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	35,487,885 - 35,763,621 (+)	NCBI		Celera
Cytogenetic Map	3	q12	NCBI

FMNL2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	152,335,174 - 152,649,826 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	152,335,136 - 152,649,831 (+)	Ensembl			hg38	GRCh38
GRCh37	2	153,191,688 - 153,506,340 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	152,899,997 - 153,214,594 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	2	153,017,258 - 153,331,854	NCBI
Celera	2	146,806,351 - 147,120,796 (+)	NCBI		Celera
Cytogenetic Map	2	q23.3	NCBI
HuRef	2	145,077,831 - 145,392,715 (+)	NCBI		HuRef
CHM1_1	2	153,197,750 - 153,512,372 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	152,787,273 - 153,102,389 (+)	NCBI		T2T-CHM13v2.0

Fmnl2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	52,747,743 - 53,023,816 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	52,747,872 - 53,023,816 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	52,857,717 - 53,134,202 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	52,857,860 - 53,133,804 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	52,716,902 - 52,993,236 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	52,679,877 - 52,956,211 (+)	NCBI		MGSCv36	mm8
Celera	2	54,599,738 - 54,875,813 (+)	NCBI		Celera
Cytogenetic Map	2	C1.1	NCBI
cM Map	2	30.69	NCBI

Fmnl2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955440	17,948,713 - 18,071,652 (+)	Ensembl
ChiLan1.0	NW_004955440	17,925,982 - 18,077,176 (+)	NCBI	ChiLan1.0	ChiLan1.0

FMNL2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	55,020,262 - 55,334,157 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	55,035,259 - 55,349,145 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	39,635,721 - 39,949,803 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	156,874,405 - 157,188,035 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	156,874,912 - 157,188,035 (+)	Ensembl			panPan2	panpan1.1

LOC476151
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	19	53,582,159 - 53,645,901 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	19	53,386,346 - 53,644,600 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	28,013,402 - 28,274,303 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha

Fmnl2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	116,314,467 - 116,592,589 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936469	25,027,040 - 25,302,795 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936469	25,024,190 - 25,303,260 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FMNL2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	60,053,877 - 60,384,655 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	15	60,054,300 - 60,384,666 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	66,699,415 - 67,030,586 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FMNL2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	37,757,033 - 38,081,750 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666040	161,485,522 - 161,801,835 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fmnl2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624866	4,436,967 - 4,738,979 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624866	4,434,956 - 4,738,599 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Fmnl2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	30,629,565 - 30,897,394 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Fmnl2
1914 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	290
Count of miRNA genes:	175
Interacting mature miRNAs:	200
Transcripts:	ENSRNOT00000006433, ENSRNOT00000059388, ENSRNOT00000073604, ENSRNOT00000075441
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300178	Hrtrt4	Heart rate QTL 4	3.74		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	51490129	111359995	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
1354589	Bw31	Body weight QTL 31	3.3		body mass (VT:0001259)	body weight (CMO:0000012)	3	53651826	98651826	Rat
1298073	Cm13	Cardiac mass QTL 13	2.5		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	45423609	58601291	Rat
2303593	Gluco46	Glucose level QTL 46	3		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	48876619	93876619	Rat
1354590	Despr11	Despair related QTL 11		0.000031	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	3	48876619	93876619	Rat
10401810	Kidm53	Kidney mass QTL 53			kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	28625339	67641995	Rat
2298542	Neuinf11	Neuroinflammation QTL 11	3.9		nervous system integrity trait (VT:0010566)	spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)	3	35403199	97383526	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	49872657	138829559	Rat
631832	Sach1	Saccharin preference QTL 1	2.7	0.02	consumption behavior trait (VT:0002069)	calculated saccharin drink intake volume (CMO:0001600)	3	47904172	92904172	Rat
2313079	Bss73	Bone structure and strength QTL 73	1.5		tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	3	47904172	70710963	Rat
631647	Bp122	Blood pressure QTL 122	6.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	51092561	96092561	Rat
2313076	Bss74	Bone structure and strength QTL 74	2	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	3	47904172	70710963	Rat
631568	Bp92	Blood pressure QTL 92	2.2	0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	15272348	60272348	Rat
1300169	Bp177	Blood pressure QTL 177	2.96		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	3	36425116	81425116	Rat
9590286	Uminl1	Urine mineral level QTL 1	3.5	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	3	48657744	93657744	Rat
4889966	Bss95	Bone structure and strength QTL 95	4.4		tibia area (VT:1000281)	tibia-fibula cross-sectional area (CMO:0001718)	3	37796919	82796919	Rat
2313093	Bmd77	Bone mineral density QTL 77	2.2	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	3	47904172	70710963	Rat
12879852	Cm93	Cardiac mass QTL 93		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	38708931	67641995	Rat
12879853	Am5	Aortic mass QTL 5		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	38708931	67641995	Rat
9590136	Scort3	Serum corticosterone level QTL 3	23.37	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	48657744	93657744	Rat
12879854	Kidm63	Kidney mass QTL 63		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	38708931	67641995	Rat
61419	Cia11	Collagen induced arthritis QTL 11	5.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	3	50766145	95766145	Rat
61356	Bp37	Blood pressure QTL 37	3		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	3	51092561	96092561	Rat
1558650	Cm48	Cardiac mass QTL 48	4	0.0001	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	3	50766145	95766145	Rat
1358905	Hrtrt17	Heart rate QTL 17	5.9	0.000014	heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	36721849	110333156	Rat
12879849	Bw180	Body weight QTL 180		0.037	body mass (VT:0001259)	body weight (CMO:0000012)	3	38708931	67641995	Rat
2313101	Bmd76	Bone mineral density QTL 76	3.6	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	3	47904172	70710963	Rat
12879850	Cm91	Cardiac mass QTL 91		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	38708931	67641995	Rat
731172	Bp151	Blood pressure QTL 151		0.04	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	38708931	67641995	Rat
12879851	Cm92	Cardiac mass QTL 92		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	38708931	67641995	Rat
8694196	Abfw2	Abdominal fat weight QTL 2	16.58	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	3	48657744	93657744	Rat
1354597	Kidm13	Kidney mass QTL 13	2.9		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	3	42158111	124558371	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	1	141509147	Rat
2325840	Bp345	Blood pressure QTL 345		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	38708931	83708931	Rat
8552950	Pigfal12	Plasma insulin-like growth factor 1 level QTL 12	7.3		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	3	48657744	93657744	Rat
631676	Cm8	Cardiac mass QTL 8	7.03	0.0001	aorta mass (VT:0002845)	aorta weight (CMO:0000076)	3	37363734	82363734	Rat
2290452	Scl56	Serum cholesterol level QTL 56	2.26		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	3	36101403	81101403	Rat
8694386	Bw159	Body weight QTL 159	4.52	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	3	48657744	93657744	Rat
1354604	Bw36	Body weight QTL 36	2.9		body mass (VT:0001259)	body weight (CMO:0000012)	3	42158111	124558371	Rat
2313049	Bss72	Bone structure and strength QTL 72	2.6	0.0001	tibia area (VT:1000281)	tibia midshaft cross-sectional area (CMO:0001717)	3	47904172	70710963	Rat
2312664	Scl62	Serum cholesterol level QTL 62		0.05	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	3	37796919	59119581	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	5675975	141509147	Rat

Markers in Region

D3Rat118

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	37,507,660 - 37,507,860 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	38,560,561 - 38,560,760	NCBI	Rnor6.0
Rnor_5.0	3	43,657,808 - 43,658,007	UniSTS	Rnor5.0
RGSC_v3.4	3	34,539,427 - 34,539,627	RGD	RGSC3.4
RGSC_v3.4	3	34,539,428 - 34,539,627	UniSTS	RGSC3.4
Celera	3	35,646,812 - 35,647,011	UniSTS
RGSC_v3.1	3	34,435,799 - 34,435,999	RGD
FHH x ACI Map	3	27.9	RGD
FHH x ACI Map	3	27.9	UniSTS
Cytogenetic Map	3	q12	UniSTS

RH142401

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	37,624,395 - 37,624,595 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	38,677,287 - 38,677,486	NCBI	Rnor6.0
Rnor_5.0	3	43,774,453 - 43,774,652	UniSTS	Rnor5.0
RGSC_v3.4	3	34,656,602 - 34,656,801	UniSTS	RGSC3.4
Celera	3	35,763,271 - 35,763,470	UniSTS
RH 3.4 Map	3	455.4	UniSTS
Cytogenetic Map	3	q12	UniSTS

AI179941

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	37,624,397 - 37,624,595 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	38,677,289 - 38,677,486	NCBI	Rnor6.0
Rnor_5.0	3	43,774,455 - 43,774,652	UniSTS	Rnor5.0
RGSC_v3.4	3	34,656,604 - 34,656,801	UniSTS	RGSC3.4
Celera	3	35,763,273 - 35,763,470	UniSTS
RH 3.4 Map	1	791.5	UniSTS
Cytogenetic Map	3	q12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	355	192	11	144	80	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_001066238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006224437	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006224439	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761822	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761823	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592149	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602261	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106784	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106785	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106786	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106787	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106788	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106789	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284876	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001837106	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001842676	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000085545 ⟹ ENSRNOP00000071681

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	57,758,191 - 58,033,831 (+)	Ensembl
mRatBN7.2 Ensembl	3	37,348,574 - 37,624,754 (+)	Ensembl
Rnor_6.0 Ensembl	3	38,559,914 - 38,675,878 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096662 ⟹ ENSRNOP00000092053

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	57,758,191 - 58,033,831 (+)	Ensembl
mRatBN7.2 Ensembl	3	37,348,574 - 37,624,754 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116367 ⟹ ENSRNOP00000089390

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	57,805,175 - 58,033,831 (+)	Ensembl
mRatBN7.2 Ensembl	3	37,348,574 - 37,624,754 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000129567 ⟹ ENSRNOP00000098738

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	57,758,191 - 58,028,801 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000134952 ⟹ ENSRNOP00000101642

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	57,758,191 - 58,032,985 (+)	Ensembl

RefSeq Acc Id:

XM_008761822 ⟹ XP_008760044

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	57,758,236 - 58,033,832 (+)	NCBI
mRatBN7.2	3	37,349,157 - 37,622,898 (+)	NCBI
Rnor_6.0	3	38,400,411 - 38,677,637 (+)	NCBI

Sequence:

show sequence

ATGAGGGCAGCCGGGGACCGGCTGGGTTCGGAGCTCTGCTAGTGAGCGGCGTGAGCTGAGCACT
AGCCGGGACGCGGCGGAGGGCGGGAGCCGAGCGCCCGGGGCTGTGGGCATTTTGGACGCGGACG
CGAGGGGCCGGGAGCCAGCCGGGGCTCCGGCACGCAACCGACATGGGCAACGCGGGGAGCATGG
ACTCGCAGCAGACCGATTTCAGGGCGCACAACGTGCCATTGAAGCTGCCGATGCCCGAGCCAGG
TGAACTGGAGGAGCGCTTTGCCATCGTGCTGAATGCTATGAACCTACCTCCTGACAAAGCCAGG
CTACTGCGGCAGTATGACAATGAGAAAAAATGGGAGCTGATCTGTGACCAGGAACGATTCCAGG
TGAAGAACCCTCCCCATACATACATACAGAAGCTCAAAGGCTACCTGGATCCAGCCGTAACCAG
GAAGAAATTCAGAAGGCGTGTTCAAGAATCTACGCAAGTGCTAAGAGAACTGGAAATTTCATTA
AGAACCAACCACATTGGGTGGGTCAGAGAGTTTTTGAATGAGGAAAACAAAGGCCTTGATGTTC
TTGTGGAGTATCTGTCCTTCGCACAGTATGCAGTCACTTTTGACTTTGAAAGTGTGGAAAGTAC
CGTGGAGAGTACGGTGGACAAATCAAAGCCCTGGAGCAGGTCCATCGAGGACCTGCACAGAGGG
AACAACCTGCCCTCCCCTGTGGGCAACAGTGTGTCCCGCTCTGGAAGACATTCTGCACTTCGAT
ATAATACCTTGCCAAGCAGAAGAACCTTGAAAAATTCAAGATTAGTGAGTAAGAAAGATGATGT
TCATGTTTGTATCATGTGTTTACGGGCCATCATGAATTACCAGTATGGTTTCAACATGGTCATG
TCTCATCCACACGCCGTCAATGAGATTGCACTAAGTCTGAACAACAAGAATCCCAGAACAAAAG
CTCTTGTCTTGGAGCTGTTGGCAGCTGTTTGTCTTGTCAGAGGCGGGCATGAAATAATTTTATC
AGCTTTTGATAACTTCAAGGAGGTCTGCGGAGAAAAGCAGCGTTTTGAGAAGCTGATGGAACAT
TTCAGGAATGAAGATAATAACATAGATTTTATGGTGGCCTCTATGCAGTTTATTAATATTGTAG
TCCATTCGGTAGAAGACATGAACTTCAGAGTTCATCTCCAATATGAATTTACCAAATTAGGCCT
GGATGAATACTTGGATAAGCTGAAACACACAGAAAGTGACAAGCTGCAAGTACAGATCCAGGCT
TACCTGGACAACGTGTTCGACGTGGGAGCTCTGTTGGAAGATGCTGAAACCAAGAATGCTGCCT
TGGAGCGGGTGGAGGAACTGGAAGAAAACATCTCTCATTTGTCTGAAAAGCTGCAGGACACGGA
GAATGAAGCCATGTCCAAGATTGTGGAACTGGAAAAGCAACTCATGCAGAGGAATAAGGAACTG
GATGTCGTCCGGGAAATCTACAAAGACGCAAACACCCAAGTTCACACATTAAGAAAAATGGTCA
AAGAAAAGGAAGAAGCCATTCAAAGACAGTCTACCCTGGAAAAAAAGATTCACGAACTGGAGAA
ACAAGGGACCATCAAAATTCAGAAGAAAGGGGACGGGGACATTGCCATACTGCCGGTTGTGGCC
TCTGGCACGTTACCCATGGGGTCAGACCTAGCAGGGGGTAACTATGTGGGACCAGTTCCAGGGG
CCGCCTCCTCAGGACCCTCAGTCCCTCCTCCCCCACCACTACCTCCGTCATCAGACACACCTGA
AGCAGCTCAAAATGGACCAGCATCACCACCTATGTCCCCACCTCCACGCCTCCCCACCTCGCCC
CCTCCACTCCCAGGTCCTGCAGCTGAGACTGTGCCAGCTCCTCCTCTGCCACCACCCCCACCTC
CCTCTGCACCCCCGTTGCCTGGGACTTCTTCACCTACAGTAGTTTTCAACTCAGGATTAGCAGC
TGTGAAAATTAAGAAGCCAATCAAGACGAAGTTCCGAATGCCAGTGTTCAACTGGGTTGCCCTG
AAGCCCAATCAGATCAACGGCACTGTCTTCAATGAGATCGATGATGAGCGGATCCTGGAGGATT
TAAATGTGGACGAATTCGAGGAAATATTCAAAACAAAAGCACAAGGTCCTGCCATTGATCTTTC
TTCAAGCAAGCAGAAAATAACACAGAAGGGATCAAGTAAAGTGACATTATTAGAAGCAAATCGA
GCCAAAAACCTTGCCATAACCTTACGGAAAGCGGGAAAGTCCGCTGATGAGATATGTAAAGCTA
TTCATGTGTTTGATTTGAAGACACTGCCAGTTGACTTTGTTGAATGTTTGATGAGGTTCTTGCC
AACTGAGAATGAGGTCAAAGTGCTTCGACTCTACGAGCGAGAGAGGAAGCCCTTGGAGAACTTG
TCAGATGAGGACCGCTTCATGATGCAGTTCAGTAAGATTGAGCGGCTCATGCAGAAGATGACCA
TCATGGCCTTCATTGGGAACTTCACAGAGAGCATTCAGATGCTGACTCCTCAACTGCACGCAAT
CATAGCAGCATCTGTCTCTATCAAGTCATCTCAAAAGCTCAAGAAAATTCTGGAGATCATCTTG
GCCCTTGGAAACTATATGAATAGCAGCAAACGAGGAGCAGTCTATGGATTCAAACTTCAGAGTT
TAGATCTGCTCTTAGATACGAAGTCGACAGACCGAAAGCAAACGCTGCTGCACTATATATCAAA
TGTGGTGAAGGAGAAATATCAACAAGTTACCCTGTTTTACAACGAGCTTCATTATGTGGAAAAA
GCTGCAGCAGTCTCCCTTGAAAATGTTCTGCTGGATGTCAAGGAGCTGCAGAGGGGAATGGATT
TAACCAAGAGGGAGTATACCATGCACGACCACAACACACTGCTGAAAGAGTTCATCCTTCACAA
CGAGGGCAAGCTGAAGAAGCTGCAGGACGATGCTAAGATTGCTCAGGATGCCTTTGATGATGTG
GTGAAGTATTTTGGTGAAAATCCCAAGACAACTCCACCCTCAGTGTTCTTCCCTGTCTTTGTTC
GATTTGTGAAAGCCTACAAGCAAGCAGAAGAGGAAAATGAGCTGAGGAAAAAGCAGGAACAAGC
TCTTATGGAAAAACTGTTAGAGCAAGAAGCCCTGATGGAGCAGCAGGATCCAAAGTCTCCTTCC
CATAAATCAAAGAGGCAGCAGCAAGAGTTAATTGCAGAATTAAGAAGGCGACAAGTTAAAGATA
ACCGTCATGTGTACGAGGGAAAAGACGGCGCCATTGAAGACATTATCACAGATCTTAGAAACCA
ACCCTACAGAAGAGCCGATGCGGTGAGACGAAGTGTGAGGCGACGCTTTGATGATCAGAATTTG
CGTTCTGTTAATGGTGGGGAAATAACAATGTGACCTGAGACCGCCTTCACGAGAAGGGTGTACA
TGAAACTGCCATTCCAGCCTTCAATACAGATGAAATACTCTCAAGGGCTCAGATTTAGTAAACA
TATAGGAATTTAAAAAATAATGGGTTCTCCTTTTAACCCCTGTTAACAAGTGCCTAAAATTGGA
AGTAACTTGCTCAGATTAATCAAAGCAATAGGATTTGACTTAAATCTTTTTACATCAGTATGTT
ACTCAGTTTTTTAACCAAAATGTAAATTTCATATTAAATTCATTATTTGCCATTGTGATTGTCC
TTTATGGCCCACCCTGGTTTCCTGGTAATCTGTAAATAACAGGGATGTGAATGCTATGGGCTTC
CTTTGCTGAGAGGTCTTCTAAGAAATTGTTTTCGAGCCATATTCACCAACTTGTAACAAGGGAC
TTGAAACAAGAGAGAGGGAAGCTGGTACACAATAACATCTTTCTACCATTAAGTCCCAGCAACG
TACAAACAGGATGAATTGCAGTGCCACTCCAAGTCATTTAATTCTCTTATTTCACGCTGTTTCC
GTGCAAGGGTAATGCATAAAAGCATTCACTTGTATGACTGCAAGATGGCATAAGACACTGAGTG
AGACTTATTTGCAGAACTGTGTTACTTGAGCTAGAGGCAGCTTTTAATAACACCAAGTATGTTT
ATTAAGTACCACTAAAATTGTCTCAGTATTCTGATTTTTGAGGACCATTATGGGTGAATCCTTA
AAATAGAAATTGGTGCCTTGTTAGTCAGGGAGATTTTACCACAAGCTCTATCAGTAAGCATTCA
AAATTACATGTGTTCTGTTAGTGTCATGTTGGGAACCTGGCCTTATTCTCTTCTGACAATCGAA
GGGTCCTTTTCTGTTTTCTTTGTAAATTATACTGATACAATTGACATTAAGTTATTAGGGCTGA
ATTGCTTTGTGTACTTCTCACTTATGGGAAATTCCAATTAAATTAACATTAAGTTTAAATTGTA
TGTGATAGGGTTAAATGGTTCACTAAGTCACTTACTTCCTCACTGGCAAGGCATTTCGATCCAT
TCCAAAGTCAAAGACTGGACTGAAGCTAAATTTGTACTTTTCACAATACATATTCTGCTTCTGG
CTTACCTTGTTGATACATCAGTATATTAATTGTAAAAATTATTGTATAGTATTTAACCACCAAA
TTTGTGTTCATGTGAACCCCTTGGTGAAGGTCCCCTTTTTCATGGATGTGTAGTTATATGATCT
TTAAAATGTACAGATATTTTGCTATAAGATTGGTGCAGTTTTTTATGGTTTTTACACTTCTCTT
TAATCCCTACCTAAGCCTCTAGGTAATACTGTAAATATTGTTTTAAAATGCATCAGCCTATGCT
ACACAATCTGAATGTTACTTTAACTTATAGTTTGTTTTTTAAATATATATATTTAACTCCAAGG
ACAGTTTAAAAGTCAGTTACCACATTTCACAGTAGTCTGCCTATTTACAGATCTCTTTTAAACT
GCCACTTGCTGTCACATTCATAAATGTGTAGTTTAAAAAGAACATGCCAAGATTGTTGTCTTGT
TGAGTCAATATTCATCTTGGTGAGTACATTAATTTGATCATGATGTCAGATAAATATTTGGACC
TTTTTCACAAAAATGAGCTGTTTTCCAAAGGTGTGCATTTGCGTAAAGCAAACTGCCTATTTCC
CAGTGTACAAATGGACAATAATGTTGGCATATTCTTGTTTGTCTATTAATGGCCCTGCTTCTTA
GCAATATTAGAAATGTTTTATAAAAGCAATTCATGTTACTTTTCTGGTCTTTTCATGCCATTTG
AGCAAATAAACTATTTACACTACTA

hide sequence

RefSeq Acc Id:

XM_008761823 ⟹ XP_008760045

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	57,758,236 - 58,033,832 (+)	NCBI
mRatBN7.2	3	37,349,157 - 37,622,827 (+)	NCBI
Rnor_6.0	3	38,400,411 - 38,677,637 (+)	NCBI

Sequence:

show sequence

ATGAGGGCAGCCGGGGACCGGCTGGGTTCGGAGCTCTGCTAGTGAGCGGCGTGAGCTGAGCACT
AGCCGGGACGCGGCGGAGGGCGGGAGCCGAGCGCCCGGGGCTGTGGGCATTTTGGACGCGGACG
CGAGGGGCCGGGAGCCAGCCGGGGCTCCGGCACGCAACCGACATGGGCAACGCGGGGAGCATGG
ACTCGCAGCAGACCGATTTCAGGGCGCACAACGTGCCATTGAAGCTGCCGATGCCCGAGCCAGG
TGAACTGGAGGAGCGCTTTGCCATCGTGCTGAATGCTATGAACCTACCTCCTGACAAAGCCAGG
CTACTGCGGCAGTATGACAATGAGAAAAAATGGGAGCTGATCTGTGACCAGGAACGATTCCAGG
TGAAGAACCCTCCCCATACATACATACAGAAGCTCAAAGGCTACCTGGATCCAGCCGTAACCAG
GAAGAAATTCAGAAGGCGTGTTCAAGAATCTACGCAAGTGCTAAGAGAACTGGAAATTTCATTA
AGAACCAACCACATTGGGTGGGTCAGAGAGTTTTTGAATGAGGAAAACAAAGGCCTTGATGTTC
TTGTGGAGTATCTGTCCTTCGCACAGTATGCAGTCACTTTTGACTTTGAAAGTGTGGAAAGTAC
CGTGGAGAGTACGGTGGACAAATCAAAGCCCTGGAGCAGGTCCATCGAGGACCTGCACAGAGGG
AACAACCTGCCCTCCCCTGTGGGCAACAGTGTGTCCCGCTCTGGAAGACATTCTGCACTTCGAT
ATAATACCTTGCCAAGCAGAAGAACCTTGAAAAATTCAAGATTAGTGAGTAAGAAAGATGATGT
TCATGTTTGTATCATGTGTTTACGGGCCATCATGAATTACCAGTATGGTTTCAACATGGTCATG
TCTCATCCACACGCCGTCAATGAGATTGCACTAAGTCTGAACAACAAGAATCCCAGAACAAAAG
CTCTTGTCTTGGAGCTGTTGGCAGCTGTTTGTCTTGTCAGAGGCGGGCATGAAATAATTTTATC
AGCTTTTGATAACTTCAAGGAGGTCTGCGGAGAAAAGCAGCGTTTTGAGAAGCTGATGGAACAT
TTCAGGAATGAAGATAATAACATAGATTTTATGGTGGCCTCTATGCAGTTTATTAATATTGTAG
TCCATTCGGTAGAAGACATGAACTTCAGAGTTCATCTCCAATATGAATTTACCAAATTAGGCCT
GGATGAATACTTGGATAAGCTGAAACACACAGAAAGTGACAAGCTGCAAGTACAGATCCAGGCT
TACCTGGACAACGTGTTCGACGTGGGAGCTCTGTTGGAAGATGCTGAAACCAAGAATGCTGCCT
TGGAGCGGGTGGAGGAACTGGAAGAAAACATCTCTCATTTGTCTGAAAAGCTGCAGGACACGGA
GAATGAAGCCATGTCCAAGATTGTGGAACTGGAAAAGCAACTCATGCAGAGGAATAAGGAACTG
GATGTCGTCCGGGAAATCTACAAAGACGCAAACACCCAAGTTCACACATTAAGAAAAATGGTCA
AAGAAAAGGAAGAAGCCATTCAAAGACAGTCTACCCTGGAAAAAAAGATTCACGAACTGGAGAA
ACAAGGGACCATCAAAATTCAGAAGAAAGGGGACGGGGACATTGCCATACTGCCGGTTGTGGCC
TCTGGCACGTTACCCATGGGGTCAGACCTAGCAGGGGGTAACTATGTGGGACCAGTTCCAGGGG
CCGCCTCCTCAGGACCCTCAGTCCCTCCTCCCCCACCACTACCTCCGTCATCAGACACACCTGA
AGCAGCTCAAAATGGACCAGCATCACCACCTATGTCCCCACCTCCACGCCTCCCCACCTCGCCC
CCTCCACTCCCAGGTCCTGCAGCTGAGACTGTGCCAGCTCCTCCTCTGCCACCACCCCCACCTC
CCTCTGCACCCCCGTTGCCTGGGACTTCTTCACCTACAGTAGTTTTCAACTCAGGATTAGCAGC
TGTGAAAATTAAGAAGCCAATCAAGACGAAGTTCCGAATGCCAGTGTTCAACTGGGTTGCCCTG
AAGCCCAATCAGATCAACGGCACTGTCTTCAATGAGATCGATGATGAGCGGATCCTGGAGGATT
TAAATGTGGACGAATTCGAGGAAATATTCAAAACAAAAGCACAAGGTCCTGCCATTGATCTTTC
TTCAAGCAAGCAGAAAATAACACAGAAGGGATCAAGTAAAGTGACATTATTAGAAGCAAATCGA
GCCAAAAACCTTGCCATAACCTTACGGAAAGCGGGAAAGTCCGCTGATGAGATATGTAAAGCTA
TTCATGTGTTTGATTTGAAGACACTGCCAGTTGACTTTGTTGAATGTTTGATGAGGTTCTTGCC
AACTGAGAATGAGGTCAAAGTGCTTCGACTCTACGAGCGAGAGAGGAAGCCCTTGGAGAACTTG
TCAGATGAGGACCGCTTCATGATGCAGTTCAGTAAGATTGAGCGGCTCATGCAGAAGATGACCA
TCATGGCCTTCATTGGGAACTTCACAGAGAGCATTCAGATGCTGACTCCTCAACTGCACGCAAT
CATAGCAGCATCTGTCTCTATCAAGTCATCTCAAAAGCTCAAGAAAATTCTGGAGATCATCTTG
GCCCTTGGAAACTATATGAATAGCAGCAAACGAGGAGCAGTCTATGGATTCAAACTTCAGAGTT
TAGATCTGCTCTTAGATACGAAGTCGACAGACCGAAAGCAAACGCTGCTGCACTATATATCAAA
TGTGGTGAAGGAGAAATATCAACAAGTTACCCTGTTTTACAACGAGCTTCATTATGTGGAAAAA
GCTGCAGCAGTCTCCCTTGAAAATGTTCTGCTGGATGTCAAGGAGCTGCAGAGGGGAATGGATT
TAACCAAGAGGGAGTATACCATGCACGACCACAACACACTGCTGAAAGAGTTCATCCTTCACAA
CGAGGGCAAGCTGAAGAAGCTGCAGGACGATGCTAAGATTGCTCAGGATGCCTTTGATGATGTG
GTGAAGTATTTTGGTGAAAATCCCAAGACAACTCCACCCTCAGTGTTCTTCCCTGTCTTTGTTC
GATTTGTGAAAGCCTACAAGCAAGCAGAAGAGGAAAATGAGCTGAGGAAAAAGCAGGAACAAGC
TCTTATGGAAAAACTGTTAGAGCAAGAAGCCCTGATGGAGCAGCAGGATCCAAAGTCTCCTTCC
CATAAATCAAAGAGGCAGCAGCAAGAGTTAATTGCAGAATTAAGAAGGCGACAAGTTAAAGATA
ACCGTCATGTGTACGAGGGAAAAGACGGCGCCATTGAAGACATTATCACAGCCTTAAAGAAGAA
TAATATCACTAAATTTCCAAATGTTCACTCGAGGATCTTAGAAACCAACCCTACAGAAGAGCCG
ATGCGGTGAGACGAAGTGTGAGGCGACGCTTTGATGATCAGAATTTGCGTTCTGTTAATGGTGG
GGAAATAACAATGTGACCTGAGACCGCCTTCACGAGAAGGGTGTACATGAAACTGCCATTCCAG
CCTTCAATACAGATGAAATACTCTCAAGGGCTCAGATTTAGTAAACATATAGGAATTTAAAAAA
TAATGGGTTCTCCTTTTAACCCCTGTTAACAAGTGCCTAAAATTGGAAGTAACTTGCTCAGATT
AATCAAAGCAATAGGATTTGACTTAAATCTTTTTACATCAGTATGTTACTCAGTTTTTTAACCA
AAATGTAAATTTCATATTAAATTCATTATTTGCCATTGTGATTGTCCTTTATGGCCCACCCTGG
TTTCCTGGTAATCTGTAAATAACAGGGATGTGAATGCTATGGGCTTCCTTTGCTGAGAGGTCTT
CTAAGAAATTGTTTTCGAGCCATATTCACCAACTTGTAACAAGGGACTTGAAACAAGAGAGAGG
GAAGCTGGTACACAATAACATCTTTCTACCATTAAGTCCCAGCAACGTACAAACAGGATGAATT
GCAGTGCCACTCCAAGTCATTTAATTCTCTTATTTCACGCTGTTTCCGTGCAAGGGTAATGCAT
AAAAGCATTCACTTGTATGACTGCAAGATGGCATAAGACACTGAGTGAGACTTATTTGCAGAAC
TGTGTTACTTGAGCTAGAGGCAGCTTTTAATAACACCAAGTATGTTTATTAAGTACCACTAAAA
TTGTCTCAGTATTCTGATTTTTGAGGACCATTATGGGTGAATCCTTAAAATAGAAATTGGTGCC
TTGTTAGTCAGGGAGATTTTACCACAAGCTCTATCAGTAAGCATTCAAAATTACATGTGTTCTG
TTAGTGTCATGTTGGGAACCTGGCCTTATTCTCTTCTGACAATCGAAGGGTCCTTTTCTGTTTT
CTTTGTAAATTATACTGATACAATTGACATTAAGTTATTAGGGCTGAATTGCTTTGTGTACTTC
TCACTTATGGGAAATTCCAATTAAATTAACATTAAGTTTAAATTGTATGTGATAGGGTTAAATG
GTTCACTAAGTCACTTACTTCCTCACTGGCAAGGCATTTCGATCCATTCCAAAGTCAAAGACTG
GACTGAAGCTAAATTTGTACTTTTCACAATACATATTCTGCTTCTGGCTTACCTTGTTGATACA
TCAGTATATTAATTGTAAAAATTATTGTATAGTATTTAACCACCAAATTTGTGTTCATGTGAAC
CCCTTGGTGAAGGTCCCCTTTTTCATGGATGTGTAGTTATATGATCTTTAAAATGTACAGATAT
TTTGCTATAAGATTGGTGCAGTTTTTTATGGTTTTTACACTTCTCTTTAATCCCTACCTAAGCC
TCTAGGTAATACTGTAAATATTGTTTTAAAATGCATCAGCCTATGCTACACAATCTGAATGTTA
CTTTAACTTATAGTTTGTTTTTTAAATATATATATTTAACTCCAAGGACAGTTTAAAAGTCAGT
TACCACATTTCACAGTAGTCTGCCTATTTACAGATCTCTTTTAAACTGCCACTTGCTGTCACAT
TCATAAATGTGTAGTTTAAAAAGAACATGCCAAGATTGTTGTCTTGTTGAGTCAATATTCATCT
TGGTGAGTACATTAATTTGATCATGATGTCAGATAAATATTTGGACCTTTTTCACAAAAATGAG
CTGTTTTCCAAAGGTGTGCATTTGCGTAAAGCAAACTGCCTATTTCCCAGTGTACAAATGGACA
ATAATGTTGGCATATTCTTGTTTGTCTATTAATGGCCCTGCTTCTTAGCAATATTAGAAATGTT
TTATAAAAGCAATTCATGTTACTTTTCTGGTCTTTTCATGCCATTTGAGCAAATAAACTATTTA
CACTACTA

hide sequence

RefSeq Acc Id:

XM_017592149 ⟹ XP_017447638

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	57,758,236 - 58,033,832 (+)	NCBI
mRatBN7.2	3	37,349,157 - 37,624,746 (+)	NCBI
Rnor_6.0	3	38,400,411 - 38,677,637 (+)	NCBI

Sequence:

show sequence

ATGAGGGCAGCCGGGGACCGGCTGGGTTCGGAGCTCTGCTAGTGAGCGGCGTGAGCTGAGCACT
AGCCGGGACGCGGCGGAGGGCGGGAGCCGAGCGCCCGGGGCTGTGGGCATTTTGGACGCGGACG
CGAGGGGCCGGGAGCCAGCCGGGGCTCCGGCACGCAACCGACATGGGCAACGCGGGGAGCATGG
ACTCGCAGCAGACCGATTTCAGGGCGCACAACGTGCCATTGAAGCTGCCGATGCCCGAGCCAGG
TGAACTGGAGGAGCGCTTTGCCATCGTGCTGAATGCTATGAACCTACCTCCTGACAAAGCCAGG
CTACTGCGGCAGTATGACAATGAGAAAAAATGGGAGCTGATCTGTGACCAGGAACGATTCCAGG
TGAAGAACCCTCCCCATACATACATACAGAAGCTCAAAGGCTACCTGGATCCAGCCGTAACCAG
GAAGAAATTCAGAAGGCGTGTTCAAGAATCTACGCAAGTGCTAAGAGAACTGGAAATTTCATTA
AGAACCAACCACATTGGGTGGGTCAGAGAGTTTTTGAATGAGGAAAACAAAGGCCTTGATGTTC
TTGTGGAGTATCTGTCCTTCGCACAGTATGCAGTCACTTTTGACTTTGAAAGTGTGGAAAGTAC
CGTGGAGAGTACGGTGGACAAATCAAAGCCCTGGAGCAGGTCCATCGAGGACCTGCACAGAGGG
AACAACCTGCCCTCCCCTGTGGGCAACAGTGTGTCCCGCTCTGGAAGACATTCTGCACTTCGAT
ATAATACCTTGCCAAGCAGAAGAACCTTGAAAAATTCAAGATTAGTGAGTAAGAAAGATGATGT
TCATGTTTGTATCATGTGTTTACGGGCCATCATGAATTACCAGTATGGTTTCAACATGGTCATG
TCTCATCCACACGCCGTCAATGAGATTGCACTAAGTCTGAACAACAAGAATCCCAGAACAAAAG
CTCTTGTCTTGGAGCTGTTGGCAGCTGTTTGTCTTGTCAGAGGCGGGCATGAAATAATTTTATC
AGCTTTTGATAACTTCAAGGAGGTCTGCGGAGAAAAGCAGCGTTTTGAGAAGCTGATGGAACAT
TTCAGGAATGAAGATAATAACATAGATTTTATGGTGGCCTCTATGCAGTTTATTAATATTGTAG
TCCATTCGGTAGAAGACATGAACTTCAGAGTTCATCTCCAATATGAATTTACCAAATTAGGCCT
GGATGAATACTTGGATAAGCTGAAACACACAGAAAGTGACAAGCTGCAAGTACAGATCCAGGCT
TACCTGGACAACGTGTTCGACGTGGGAGCTCTGTTGGAAGATGCTGAAACCAAGAATGCTGCCT
TGGAGCGGGTGGAGGAACTGGAAGAAAACATCTCTCATTTGTCTGAAAAGCTGCAGGACACGGA
GAATGAAGCCATGTCCAAGATTGTGGAACTGGAAAAGCAACTCATGCAGAGGAATAAGGAACTG
GATGTCGTCCGGGAAATCTACAAAGACGCAAACACCCAAGTTCACACATTAAGAAAAATGGTCA
AAGAAAAGGAAGAAGCCATTCAAAGACAGTCTACCCTGGAAAAAAAGATTCACGAACTGGAGAA
ACAAGGGACCATCAAAATTCAGAAGAAAGGGGACGGGGACATTGCCATACTGCCGGTTGTGGCC
TCTGGCACGTTACCCATGGGGTCAGACCTAGCAGGGGGTAACTATGTGGGACCAGTTCCAGGGG
CCGCCTCCTCAGGACCCTCAGTCCCTCCTCCCCCACCACTACCTCCGTCATCAGACACACCTGA
AGCAGCTCAAAATGGACCAGCATCACCACCTATGTCCCCACCTCCACGCCTCCCCACCTCGCCC
CCTCCACTCCCAGGTCCTGCAGCTGAGACTGTGCCAGCTCCTCCTCTGCCACCACCCCCACCTC
CCTCTGCACCCCCGTTGCCTGGGACTTCTTCACCTACAGTAGTTTTCAACTCAGGATTAGCAGC
TGTGAAAATTAAGAAGCCAATCAAGACGAAGTTCCGAATGCCAGTGTTCAACTGGGTTGCCCTG
AAGCCCAATCAGATCAACGGCACTGTCTTCAATGAGATCGATGATGAGCGGATCCTGGAGGATT
TAAATGTGGACGAATTCGAGGAAATATTCAAAACAAAAGCACAAGGTCCTGCCATTGATCTTTC
TTCAAGCAAGCAGAAAATAACACAGAAGGGATCAAGTAAAGTGACATTATTAGAAGCAAATCGA
GCCAAAAACCTTGCCATAACCTTACGGAAAGCGGGAAAGTCCGCTGATGAGATATGTAAAGCTA
TTCATGTGTTTGATTTGAAGACACTGCCAGTTGACTTTGTTGAATGTTTGATGAGGTTCTTGCC
AACTGAGAATGAGGTCAAAGTGCTTCGACTCTACGAGCGAGAGAGGAAGCCCTTGGAGAACTTG
TCAGATGAGGACCGCTTCATGATGCAGTTCAGTAAGATTGAGCGGCTCATGCAGAAGATGACCA
TCATGGCCTTCATTGGGAACTTCACAGAGAGCATTCAGATGCTGACTCCTCAACTGCACGCAAT
CATAGCAGCATCTGTCTCTATCAAGTCATCTCAAAAGCTCAAGAAAATTCTGGAGATCATCTTG
GCCCTTGGAAACTATATGAATAGCAGCAAACGAGGAGCAGTCTATGGATTCAAACTTCAGAGTT
TAGATCTGCTCTTAGATACGAAGTCGACAGACCGAAAGCAAACGCTGCTGCACTATATATCAAA
TGTGGTGAAGGAGAAATATCAACAAGTTACCCTGTTTTACAACGAGCTTCATTATGTGGAAAAA
GCTGCAGCAGTCTCCCTTGAAAATGTTCTGCTGGATGTCAAGGAGCTGCAGAGGGGAATGGATT
TAACCAAGAGGGAGTATACCATGCACGACCACAACACACTGCTGAAAGAGTTCATCCTTCACAA
CGAGGGCAAGCTGAAGAAGCTGCAGGACGATGCTAAGATTGCTCAGGATGCCTTTGATGATGTG
GTGAAGTATTTTGGTGAAAATCCCAAGACAACTCCACCCTCAGTGTTCTTCCCTGTCTTTGTTC
GATTTGTGAAAGCCTACAAGCAAGCAGAAGAGGAAAATGAGCTGAGGAAAAAGCAGGAACAAGC
TCTTATGGAAAAACTGTTAGAGCAAGAAGCCCTGATGGAGCAGCAGGATCCAAAGTCTCCTTCC
CATAAATCAAAGAGGCAGCAGCAAGAGTTAATTGCAGAATTAAGAAGGCGACAAGTTAAAGATA
ACCGTCATGTGTACGAGGGAAAAGACGGCGCCATTGAAGACATTATCACAGCCTTAAAGAAGAA
TAATATCACTAAATTTCCAAATGTTCACTCGAGGGTAAGGATTTCTTCTAGCACACCGGTGGTG
GAGGATACACAGAGCTGATCTTAGAAACCAACCCTACAGAAGAGCCGATGCGGTGAGACGAAGT
GTGAGGCGACGCTTTGATGATCAGAATTTGCGTTCTGTTAATGGTGGGGAAATAACAATGTGAC
CTGAGACCGCCTTCACGAGAAGGGTGTACATGAAACTGCCATTCCAGCCTTCAATACAGATGAA
ATACTCTCAAGGGCTCAGATTTAGTAAACATATAGGAATTTAAAAAATAATGGGTTCTCCTTTT
AACCCCTGTTAACAAGTGCCTAAAATTGGAAGTAACTTGCTCAGATTAATCAAAGCAATAGGAT
TTGACTTAAATCTTTTTACATCAGTATGTTACTCAGTTTTTTAACCAAAATGTAAATTTCATAT
TAAATTCATTATTTGCCATTGTGATTGTCCTTTATGGCCCACCCTGGTTTCCTGGTAATCTGTA
AATAACAGGGATGTGAATGCTATGGGCTTCCTTTGCTGAGAGGTCTTCTAAGAAATTGTTTTCG
AGCCATATTCACCAACTTGTAACAAGGGACTTGAAACAAGAGAGAGGGAAGCTGGTACACAATA
ACATCTTTCTACCATTAAGTCCCAGCAACGTACAAACAGGATGAATTGCAGTGCCACTCCAAGT
CATTTAATTCTCTTATTTCACGCTGTTTCCGTGCAAGGGTAATGCATAAAAGCATTCACTTGTA
TGACTGCAAGATGGCATAAGACACTGAGTGAGACTTATTTGCAGAACTGTGTTACTTGAGCTAG
AGGCAGCTTTTAATAACACCAAGTATGTTTATTAAGTACCACTAAAATTGTCTCAGTATTCTGA
TTTTTGAGGACCATTATGGGTGAATCCTTAAAATAGAAATTGGTGCCTTGTTAGTCAGGGAGAT
TTTACCACAAGCTCTATCAGTAAGCATTCAAAATTACATGTGTTCTGTTAGTGTCATGTTGGGA
ACCTGGCCTTATTCTCTTCTGACAATCGAAGGGTCCTTTTCTGTTTTCTTTGTAAATTATACTG
ATACAATTGACATTAAGTTATTAGGGCTGAATTGCTTTGTGTACTTCTCACTTATGGGAAATTC
CAATTAAATTAACATTAAGTTTAAATTGTATGTGATAGGGTTAAATGGTTCACTAAGTCACTTA
CTTCCTCACTGGCAAGGCATTTCGATCCATTCCAAAGTCAAAGACTGGACTGAAGCTAAATTTG
TACTTTTCACAATACATATTCTGCTTCTGGCTTACCTTGTTGATACATCAGTATATTAATTGTA
AAAATTATTGTATAGTATTTAACCACCAAATTTGTGTTCATGTGAACCCCTTGGTGAAGGTCCC
CTTTTTCATGGATGTGTAGTTATATGATCTTTAAAATGTACAGATATTTTGCTATAAGATTGGT
GCAGTTTTTTATGGTTTTTACACTTCTCTTTAATCCCTACCTAAGCCTCTAGGTAATACTGTAA
ATATTGTTTTAAAATGCATCAGCCTATGCTACACAATCTGAATGTTACTTTAACTTATAGTTTG
TTTTTTAAATATATATATTTAACTCCAAGGACAGTTTAAAAGTCAGTTACCACATTTCACAGTA
GTCTGCCTATTTACAGATCTCTTTTAAACTGCCACTTGCTGTCACATTCATAAATGTGTAGTTT
AAAAAGAACATGCCAAGATTGTTGTCTTGTTGAGTCAATATTCATCTTGGTGAGTACATTAATT
TGATCATGATGTCAGATAAATATTTGGACCTTTTTCACAAAAATGAGCTGTTTTCCAAAGGTGT
GCATTTGCGTAAAGCAAACTGCCTATTTCCCAGTGTACAAATGGACAATAATGTTGGCATATTC
TTGTTTGTCTATTAATGGCCCTGCTTCTTAGCAATATTAGAAATGTTTTATAAAAGCAATTCAT
GTTACTTTTCTGGTCTTTTCATGCCATTTGAGCAAATAAACTATTTACACTACTA

hide sequence

RefSeq Acc Id:

XM_039106784 ⟹ XP_038962712

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	57,758,236 - 58,033,832 (+)	NCBI
mRatBN7.2	3	37,348,792 - 37,624,746 (+)	NCBI

RefSeq Acc Id:

XM_039106785 ⟹ XP_038962713

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	57,758,236 - 58,033,832 (+)	NCBI
mRatBN7.2	3	37,348,791 - 37,624,746 (+)	NCBI

RefSeq Acc Id:

XM_039106786 ⟹ XP_038962714

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	57,758,236 - 58,032,011 (+)	NCBI
mRatBN7.2	3	37,348,791 - 37,624,746 (+)	NCBI

RefSeq Acc Id:

XM_039106787 ⟹ XP_038962715

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	57,758,236 - 58,033,832 (+)	NCBI
mRatBN7.2	3	37,348,791 - 37,624,746 (+)	NCBI

RefSeq Acc Id:

XM_039106788 ⟹ XP_038962716

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	57,758,236 - 58,028,801 (+)	NCBI
mRatBN7.2	3	37,349,157 - 37,619,681 (+)	NCBI

RefSeq Acc Id:

XM_039106789 ⟹ XP_038962717

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	57,758,236 - 58,033,832 (+)	NCBI
mRatBN7.2	3	37,348,792 - 37,624,746 (+)	NCBI

RefSeq Acc Id:

XM_039106790 ⟹ XP_038962718

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	57,758,236 - 58,033,832 (+)	NCBI
mRatBN7.2	3	37,348,793 - 37,624,746 (+)	NCBI

RefSeq Acc Id:

XM_063284876 ⟹ XP_063140946

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	57,758,236 - 58,030,392 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_008760044	(Get FASTA)	NCBI Sequence Viewer
	XP_008760045	(Get FASTA)	NCBI Sequence Viewer
	XP_017447638	(Get FASTA)	NCBI Sequence Viewer
	XP_038962712	(Get FASTA)	NCBI Sequence Viewer
	XP_038962713	(Get FASTA)	NCBI Sequence Viewer
	XP_038962714	(Get FASTA)	NCBI Sequence Viewer
	XP_038962715	(Get FASTA)	NCBI Sequence Viewer
	XP_038962716	(Get FASTA)	NCBI Sequence Viewer
	XP_038962717	(Get FASTA)	NCBI Sequence Viewer
	XP_038962718	(Get FASTA)	NCBI Sequence Viewer
	XP_063140946	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000071681
	ENSRNOP00000071681.2
	ENSRNOP00000089390.2
	ENSRNOP00000092053.2
	ENSRNOP00000098738
	ENSRNOP00000098738.1
	ENSRNOP00000101642
	ENSRNOP00000101642.1

RefSeq Acc Id:

XP_008760045 ⟸ XM_008761823

- Peptide Label:

isoform X8

- Sequence:

show sequence

MGNAGSMDSQQTDFRAHNVPLKLPMPEPGELEERFAIVLNAMNLPPDKARLLRQYDNEKKWELI
CDQERFQVKNPPHTYIQKLKGYLDPAVTRKKFRRRVQESTQVLRELEISLRTNHIGWVREFLNE
ENKGLDVLVEYLSFAQYAVTFDFESVESTVESTVDKSKPWSRSIEDLHRGNNLPSPVGNSVSRS
GRHSALRYNTLPSRRTLKNSRLVSKKDDVHVCIMCLRAIMNYQYGFNMVMSHPHAVNEIALSLN
NKNPRTKALVLELLAAVCLVRGGHEIILSAFDNFKEVCGEKQRFEKLMEHFRNEDNNIDFMVAS
MQFINIVVHSVEDMNFRVHLQYEFTKLGLDEYLDKLKHTESDKLQVQIQAYLDNVFDVGALLED
AETKNAALERVEELEENISHLSEKLQDTENEAMSKIVELEKQLMQRNKELDVVREIYKDANTQV
HTLRKMVKEKEEAIQRQSTLEKKIHELEKQGTIKIQKKGDGDIAILPVVASGTLPMGSDLAGGN
YVGPVPGAASSGPSVPPPPPLPPSSDTPEAAQNGPASPPMSPPPRLPTSPPPLPGPAAETVPAP
PLPPPPPPSAPPLPGTSSPTVVFNSGLAAVKIKKPIKTKFRMPVFNWVALKPNQINGTVFNEID
DERILEDLNVDEFEEIFKTKAQGPAIDLSSSKQKITQKGSSKVTLLEANRAKNLAITLRKAGKS
ADEICKAIHVFDLKTLPVDFVECLMRFLPTENEVKVLRLYERERKPLENLSDEDRFMMQFSKIE
RLMQKMTIMAFIGNFTESIQMLTPQLHAIIAASVSIKSSQKLKKILEIILALGNYMNSSKRGAV
YGFKLQSLDLLLDTKSTDRKQTLLHYISNVVKEKYQQVTLFYNELHYVEKAAAVSLENVLLDVK
ELQRGMDLTKREYTMHDHNTLLKEFILHNEGKLKKLQDDAKIAQDAFDDVVKYFGENPKTTPPS
VFFPVFVRFVKAYKQAEEENELRKKQEQALMEKLLEQEALMEQQDPKSPSHKSKRQQQELIAEL
RRRQVKDNRHVYEGKDGAIEDIITALKKNNITKFPNVHSRILETNPTEEPMR

hide sequence

RefSeq Acc Id:	XP_008760044 ⟸ XM_008761822
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6AKV5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGNAGSMDSQQTDFRAHNVPLKLPMPEPGELEERFAIVLNAMNLPPDKARLLRQYDNEKKWELI CDQERFQVKNPPHTYIQKLKGYLDPAVTRKKFRRRVQESTQVLRELEISLRTNHIGWVREFLNE ENKGLDVLVEYLSFAQYAVTFDFESVESTVESTVDKSKPWSRSIEDLHRGNNLPSPVGNSVSRS GRHSALRYNTLPSRRTLKNSRLVSKKDDVHVCIMCLRAIMNYQYGFNMVMSHPHAVNEIALSLN NKNPRTKALVLELLAAVCLVRGGHEIILSAFDNFKEVCGEKQRFEKLMEHFRNEDNNIDFMVAS MQFINIVVHSVEDMNFRVHLQYEFTKLGLDEYLDKLKHTESDKLQVQIQAYLDNVFDVGALLED AETKNAALERVEELEENISHLSEKLQDTENEAMSKIVELEKQLMQRNKELDVVREIYKDANTQV HTLRKMVKEKEEAIQRQSTLEKKIHELEKQGTIKIQKKGDGDIAILPVVASGTLPMGSDLAGGN YVGPVPGAASSGPSVPPPPPLPPSSDTPEAAQNGPASPPMSPPPRLPTSPPPLPGPAAETVPAP PLPPPPPPSAPPLPGTSSPTVVFNSGLAAVKIKKPIKTKFRMPVFNWVALKPNQINGTVFNEID DERILEDLNVDEFEEIFKTKAQGPAIDLSSSKQKITQKGSSKVTLLEANRAKNLAITLRKAGKS ADEICKAIHVFDLKTLPVDFVECLMRFLPTENEVKVLRLYERERKPLENLSDEDRFMMQFSKIE RLMQKMTIMAFIGNFTESIQMLTPQLHAIIAASVSIKSSQKLKKILEIILALGNYMNSSKRGAV YGFKLQSLDLLLDTKSTDRKQTLLHYISNVVKEKYQQVTLFYNELHYVEKAAAVSLENVLLDVK ELQRGMDLTKREYTMHDHNTLLKEFILHNEGKLKKLQDDAKIAQDAFDDVVKYFGENPKTTPPS VFFPVFVRFVKAYKQAEEENELRKKQEQALMEKLLEQEALMEQQDPKSPSHKSKRQQQELIAEL RRRQVKDNRHVYEGKDGAIEDIITDLRNQPYRRADAVRRSVRRRFDDQNLRSVNGGEITM hide sequence

RefSeq Acc Id:	XP_017447638 ⟸ XM_017592149
- Peptide Label:	isoform X6
- UniProtKB:	A0A0G2K132 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGNAGSMDSQQTDFRAHNVPLKLPMPEPGELEERFAIVLNAMNLPPDKARLLRQYDNEKKWELI CDQERFQVKNPPHTYIQKLKGYLDPAVTRKKFRRRVQESTQVLRELEISLRTNHIGWVREFLNE ENKGLDVLVEYLSFAQYAVTFDFESVESTVESTVDKSKPWSRSIEDLHRGNNLPSPVGNSVSRS GRHSALRYNTLPSRRTLKNSRLVSKKDDVHVCIMCLRAIMNYQYGFNMVMSHPHAVNEIALSLN NKNPRTKALVLELLAAVCLVRGGHEIILSAFDNFKEVCGEKQRFEKLMEHFRNEDNNIDFMVAS MQFINIVVHSVEDMNFRVHLQYEFTKLGLDEYLDKLKHTESDKLQVQIQAYLDNVFDVGALLED AETKNAALERVEELEENISHLSEKLQDTENEAMSKIVELEKQLMQRNKELDVVREIYKDANTQV HTLRKMVKEKEEAIQRQSTLEKKIHELEKQGTIKIQKKGDGDIAILPVVASGTLPMGSDLAGGN YVGPVPGAASSGPSVPPPPPLPPSSDTPEAAQNGPASPPMSPPPRLPTSPPPLPGPAAETVPAP PLPPPPPPSAPPLPGTSSPTVVFNSGLAAVKIKKPIKTKFRMPVFNWVALKPNQINGTVFNEID DERILEDLNVDEFEEIFKTKAQGPAIDLSSSKQKITQKGSSKVTLLEANRAKNLAITLRKAGKS ADEICKAIHVFDLKTLPVDFVECLMRFLPTENEVKVLRLYERERKPLENLSDEDRFMMQFSKIE RLMQKMTIMAFIGNFTESIQMLTPQLHAIIAASVSIKSSQKLKKILEIILALGNYMNSSKRGAV YGFKLQSLDLLLDTKSTDRKQTLLHYISNVVKEKYQQVTLFYNELHYVEKAAAVSLENVLLDVK ELQRGMDLTKREYTMHDHNTLLKEFILHNEGKLKKLQDDAKIAQDAFDDVVKYFGENPKTTPPS VFFPVFVRFVKAYKQAEEENELRKKQEQALMEKLLEQEALMEQQDPKSPSHKSKRQQQELIAEL RRRQVKDNRHVYEGKDGAIEDIITALKKNNITKFPNVHSRVRISSSTPVVEDTQS hide sequence

Ensembl Acc Id:

ENSRNOP00000071681 ⟸ ENSRNOT00000085545

RefSeq Acc Id:	XP_038962714 ⟸ XM_039106786
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038962713 ⟸ XM_039106785
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038962715 ⟸ XM_039106787
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038962712 ⟸ XM_039106784
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038962717 ⟸ XM_039106789
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_038962718 ⟸ XM_039106790
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_038962716 ⟸ XM_039106788
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6AV50 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000092053 ⟸ ENSRNOT00000096662

Ensembl Acc Id:

ENSRNOP00000089390 ⟸ ENSRNOT00000116367

RefSeq Acc Id:	XP_063140946 ⟸ XM_063284876
- Peptide Label:	isoform X3

Ensembl Acc Id:

ENSRNOP00000098738 ⟸ ENSRNOT00000129567

Ensembl Acc Id:

ENSRNOP00000101642 ⟸ ENSRNOT00000134952

Protein Domains

FH2 GBD/FH3

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K132-F1-model_v2	AlphaFold	A0A0G2K132	1-1038	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1560248	AgrOrtholog
BioCyc Gene	G2FUF-49720	BioCyc
Ensembl Genes	ENSRNOG00000055567	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000085545	ENTREZGENE
	ENSRNOT00000085545.3	UniProtKB/TrEMBL
	ENSRNOT00000096662.2	UniProtKB/TrEMBL
	ENSRNOT00000116367.2	UniProtKB/TrEMBL
	ENSRNOT00000129567	ENTREZGENE
	ENSRNOT00000129567.1	UniProtKB/TrEMBL
	ENSRNOT00000134952	ENTREZGENE
	ENSRNOT00000134952.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.58.2220	UniProtKB/TrEMBL
	1.25.10.10	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	DAD_dom	UniProtKB/TrEMBL
	Drf_FH3	UniProtKB/TrEMBL
	Drf_GTPase-bd	UniProtKB/TrEMBL
	FH2_actin-bd	UniProtKB/TrEMBL
	FH2_Formin_sf	UniProtKB/TrEMBL
	FMNL	UniProtKB/TrEMBL
	GTPase-bd/formin_homology_3	UniProtKB/TrEMBL
NCBI Gene	499797	ENTREZGENE
PANTHER	PTHR45857	UniProtKB/TrEMBL
	PTHR45857:SF5	UniProtKB/TrEMBL
Pfam	Drf_FH3	UniProtKB/TrEMBL
	Drf_GBD	UniProtKB/TrEMBL
	FH2	UniProtKB/TrEMBL
PhenoGen	Fmnl2	PhenoGen
PRINTS	WILMSTUMOUR	UniProtKB/TrEMBL
PROSITE	DAD	UniProtKB/TrEMBL
	FH2	UniProtKB/TrEMBL
	GBD_FH3	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000055567	RatGTEx
SMART	Drf_FH3	UniProtKB/TrEMBL
	Drf_GBD	UniProtKB/TrEMBL
	FH2	UniProtKB/TrEMBL
Superfamily-SCOP	ARM-type_fold	UniProtKB/TrEMBL
	Formin homology 2 domain (FH2 domain)	UniProtKB/TrEMBL
UniProt	A0A0G2K132	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AKV5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AV50	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0L3S1_RAT	UniProtKB/TrEMBL
	A0ABK0LBX3_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2010-04-23	Fmnl2	formin-like 2	RGD1560248	similar to formin-like 2 isoform B	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1560248	similar to formin-like 2 isoform B	RGD1560248_predicted	similar to formin-like 2 isoform B (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1560248_predicted	similar to formin-like 2 isoform B (predicted)	LOC499797	similar to formin-like 2 isoform B	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC499797	similar to formin-like 2 isoform B			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD