Zfp800 (zinc finger protein 800) - Rat Genome Database

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Gene: Zfp800 (zinc finger protein 800) Rattus norvegicus
Analyze
Symbol: Zfp800
Name: zinc finger protein 800
RGD ID: 1560157
Description: Predicted to enable DNA binding activity and zinc ion binding activity. Predicted to act upstream of or within acinar cell differentiation and endocrine pancreas development. Predicted to be located in nucleus. Orthologous to human ZNF800 (zinc finger protein 800); INTERACTS WITH bisphenol A; paracetamol; thioacetamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: hypothetical protein LOC500057; LOC500057; RGD1560157; similar to hypothetical protein LOC168850
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8457,763,789 - 57,977,318 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl457,767,506 - 57,814,209 (-)EnsemblGRCr8
mRatBN7.2456,798,326 - 56,849,766 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl456,826,997 - 56,849,791 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx461,819,963 - 61,841,987 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0457,733,467 - 57,755,209 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0456,138,000 - 56,160,024 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0455,502,644 - 55,527,039 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl455,502,693 - 55,527,156 (-)Ensemblrn6Rnor6.0
Rnor_5.0455,217,749 - 55,267,999 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4455,036,240 - 55,058,116 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera451,944,724 - 51,965,983 (-)NCBICelera
Cytogenetic Map4q22NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleolus  (IEA,ISO)
nucleus  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Zfp800
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8457,763,789 - 57,977,318 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl457,767,506 - 57,814,209 (-)EnsemblGRCr8
mRatBN7.2456,798,326 - 56,849,766 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl456,826,997 - 56,849,791 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx461,819,963 - 61,841,987 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0457,733,467 - 57,755,209 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0456,138,000 - 56,160,024 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0455,502,644 - 55,527,039 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl455,502,693 - 55,527,156 (-)Ensemblrn6Rnor6.0
Rnor_5.0455,217,749 - 55,267,999 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4455,036,240 - 55,058,116 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera451,944,724 - 51,965,983 (-)NCBICelera
Cytogenetic Map4q22NCBI
ZNF800
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387127,342,859 - 127,392,708 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7127,346,790 - 127,431,924 (-)Ensemblhg38GRCh38
GRCh377127,010,097 - 127,032,762 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367126,797,589 - 126,820,003 (-)NCBIBuild 36Build 36hg18NCBI36
Celera7121,814,067 - 121,836,470 (-)NCBICelera
Cytogenetic Map7q31.33NCBI
HuRef7121,371,488 - 121,393,868 (-)NCBIHuRef
CHM1_17126,943,650 - 126,966,064 (-)NCBICHM1_1
T2T-CHM13v2.07128,654,544 - 128,706,384 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27126,393,790 - 126,416,193 (-)NCBI
Zfp800
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39628,210,543 - 28,398,010 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl628,239,926 - 28,398,004 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38628,210,548 - 28,398,033 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl628,239,927 - 28,398,005 (-)Ensemblmm10GRCm38
MGSCv37628,189,931 - 28,211,601 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36628,210,753 - 28,212,609 (-)NCBIMGSCv36mm8
Celera628,247,222 - 28,268,892 (-)NCBICelera
Cytogenetic Map6A3.2- A3.3NCBI
cM Map611.99NCBI
Znf800
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554798,384,199 - 8,425,296 (-)Ensembl
ChiLan1.0NW_0049554798,380,513 - 8,425,296 (-)NCBIChiLan1.0ChiLan1.0
ZNF800
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26164,199,671 - 164,448,227 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1716,209,922 - 16,463,068 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07119,337,671 - 119,584,646 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17132,010,310 - 132,042,087 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7132,023,845 - 132,042,024 (-)EnsemblpanPan2panpan1.1
ZNF800
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1148,866,284 - 8,911,223 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl148,866,683 - 8,911,208 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha148,558,840 - 8,580,393 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0148,639,592 - 8,661,131 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl148,639,068 - 8,684,522 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1148,843,707 - 8,865,302 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0148,578,170 - 8,599,730 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0148,731,762 - 8,753,354 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Znf800
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511853,486,759 - 53,507,661 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647914,586,570 - 14,631,445 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647914,609,482 - 14,631,445 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF800
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1820,834,506 - 20,856,933 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11820,834,519 - 20,858,614 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ZNF800
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12196,160,905 - 96,209,797 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2196,183,991 - 96,207,867 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660427,198,327 - 7,250,318 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf800
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247838,562,860 - 8,616,619 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247838,562,998 - 8,614,817 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Znf800
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v16131,332,692 - 131,356,573 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Zfp800
973 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:54
Count of miRNA genes:40
Interacting mature miRNAs:49
Transcripts:ENSRNOT00000010223
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2302371Stl22Serum triglyceride level QTL 225.15blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)41308014658080146Rat
2303585Bw86Body weight QTL 864body mass (VT:0001259)body weight (CMO:0000012)41564430960644309Rat
5685012Bmd87Bone mineral density QTL 875.1tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)43511329080113290Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)439431983123203361Rat
61445Strs3Sensitivity to stroke QTL 33cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)44140057786400577Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44442502489425024Rat
5685009Bmd86Bone mineral density QTL 863.7tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)457613242102613242Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)427730518170099664Rat
1331807Rf31Renal function QTL 312.988urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)44049044275726188Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)426234499134199155Rat
631261Tcas3Tongue tumor susceptibility QTL 36.88tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)41170660492690519Rat
10450825Scl78Serum cholesterol level QTL 783.70.01blood VLDL cholesterol amount (VT:0005144)blood low density lipoprotein cholesterol level (CMO:0000053)45014392658080146Rat
2313401Anxrr27Anxiety related response QTL 27aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)41890069763900697Rat
10450821Scl77Serum cholesterol level QTL 774.10.01blood VLDL cholesterol amount (VT:0005144)blood high density lipoprotein cholesterol level (CMO:0000052)45014392658080146Rat
8655961Kidm43Kidney mass QTL 4318kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)43726957782269577Rat
10450818Scl76Serum cholesterol level QTL 763.60.01blood VLDL cholesterol amount (VT:0005144)blood high density lipoprotein cholesterol level (CMO:0000052)45014392658080146Rat
1354612Foco1Food consumption QTL 18.87eating behavior trait (VT:0001431)food intake rate (CMO:0000427)445429897149763204Rat
6909128Pancm4Pancreatic morphology QTL 411.35pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)427862204126119996Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45889999148002343Rat
61475Aia2Adjuvant induced arthritis QTL 25.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)44047145375939996Rat
8694439Bw168Body weight QTL 1689.570.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)44140060386400603Rat
61412Pia2Pristane induced arthritis QTL 23.9joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)42228845363245191Rat
8552807Vie4Viral induced encephalitis QTL 47.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)41890069763900697Rat
8655906Rf60Renal function QTL 603.8blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)43044896182336920Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)445429709157555683Rat
7387227Uae40Urinary albumin excretion QTL 402.90.0052urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)41891315163913151Rat
6909122Insul22Insulin level QTL 224.63blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)42786220462997402Rat
1558651Swd3Spike wave discharge measurement QTL 34.620.000024brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge frequency (CMO:0001742)44140057786400577Rat
1358203Stl19Serum triglyceride level QTL 192.80.002blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)42192515166925151Rat
1354660Salc1Saline consumption QTL 111.26drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)445429897149763204Rat
1641833Alc21Alcohol consumption QTL 218.60.0001drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)457664252127749483Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)4163900697Rat
1298082Stresp4Stress response QTL 4blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)451085655113588029Rat
1300139Hrtrt6Heart rate QTL 62.85heart pumping trait (VT:2000009)heart rate (CMO:0000002)440490442117737312Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)457613339151163960Rat
12798520Anxrr55Anxiety related response QTL 554.450.01locomotor behavior trait (VT:0001392)number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)433538597116185060Rat
4889969Bss96Bone structure and strength QTL 964.9tibia size trait (VT:0100001)tibia cortical bone volume (CMO:0001725)457613242102613242Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)412212457182430611Rat
4889972Bss97Bone structure and strength QTL 975.6tibia size trait (VT:0100001)tibia total bone volume (CMO:0001724)457613242102613242Rat

Markers in Region
AI070451  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2456,851,154 - 56,851,364 (+)MAPPERmRatBN7.2
Rnor_6.0455,528,479 - 55,528,688NCBIRnor6.0
Rnor_5.0455,270,403 - 55,270,612UniSTSRnor5.0
RGSC_v3.4455,060,520 - 55,060,729UniSTSRGSC3.4
Celera451,968,396 - 51,968,605UniSTS
RH 3.4 Map4301.0UniSTS
Cytogenetic Map4q22UniSTS
ECD17051  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2456,849,442 - 56,849,836 (+)MAPPERmRatBN7.2
Rnor_6.0455,526,767 - 55,527,160NCBIRnor6.0
Rnor_5.0455,268,691 - 55,269,084UniSTSRnor5.0
RGSC_v3.4455,058,808 - 55,059,201UniSTSRGSC3.4
Cytogenetic Map4q22UniSTS
REN114775  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2456,829,022 - 56,829,274 (+)MAPPERmRatBN7.2
Rnor_6.0455,506,101 - 55,506,352NCBIRnor6.0
Rnor_5.0455,248,437 - 55,248,688UniSTSRnor5.0
RGSC_v3.4455,038,264 - 55,038,515UniSTSRGSC3.4
Celera451,946,748 - 51,946,999UniSTS
Cytogenetic Map4q22UniSTS
REN114859  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2456,849,170 - 56,849,367 (+)MAPPERmRatBN7.2
Rnor_6.0455,526,495 - 55,526,691NCBIRnor6.0
Rnor_5.0455,268,419 - 55,268,615UniSTSRnor5.0
RGSC_v3.4455,058,536 - 55,058,732UniSTSRGSC3.4
Cytogenetic Map4q22UniSTS
REN114858  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8457,814,380 - 57,814,646 (+)Marker Load Pipeline
mRatBN7.2456,848,922 - 56,849,187 (+)MAPPERmRatBN7.2
Rnor_6.0455,526,247 - 55,526,511NCBIRnor6.0
Rnor_5.0455,268,171 - 55,268,435UniSTSRnor5.0
RGSC_v3.4455,058,288 - 55,058,552UniSTSRGSC3.4
Celera451,966,155 - 51,966,419UniSTS
Cytogenetic Map4q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001109225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008762812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008762813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008762814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008762815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008762816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039108103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039108104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039108105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039108106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039108107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039108108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC103101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000010223   ⟹   ENSRNOP00000010223
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl457,792,457 - 57,806,969 (-)Ensembl
mRatBN7.2 Ensembl456,826,997 - 56,848,751 (-)Ensembl
Rnor_6.0 Ensembl455,503,944 - 55,527,156 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000087407   ⟹   ENSRNOP00000070530
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl457,767,506 - 57,814,209 (-)Ensembl
mRatBN7.2 Ensembl456,827,797 - 56,849,791 (-)Ensembl
Rnor_6.0 Ensembl455,502,693 - 55,527,092 (-)Ensembl
RefSeq Acc Id: NM_001109225   ⟹   NP_001102695
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8457,792,457 - 57,814,209 (-)NCBI
mRatBN7.2456,826,997 - 56,848,751 (-)NCBI
Rnor_6.0455,504,077 - 55,526,075 (-)NCBI
Rnor_5.0455,217,749 - 55,267,999 (-)NCBI
RGSC_v3.4455,036,240 - 55,058,116 (-)RGD
Celera451,944,724 - 51,965,983 (-)RGD
Sequence:
RefSeq Acc Id: XM_039108103   ⟹   XP_038964031
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8457,763,789 - 57,815,226 (-)NCBI
mRatBN7.2456,798,326 - 56,849,766 (-)NCBI
RefSeq Acc Id: XM_039108104   ⟹   XP_038964032
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8457,763,789 - 57,814,786 (-)NCBI
mRatBN7.2456,798,326 - 56,849,326 (-)NCBI
RefSeq Acc Id: XM_039108105   ⟹   XP_038964033
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8457,763,789 - 57,814,856 (-)NCBI
mRatBN7.2456,798,326 - 56,849,395 (-)NCBI
RefSeq Acc Id: XM_039108106   ⟹   XP_038964034
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8457,763,789 - 57,814,960 (-)NCBI
mRatBN7.2456,798,326 - 56,849,497 (-)NCBI
RefSeq Acc Id: XM_039108107   ⟹   XP_038964035
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8457,763,789 - 57,814,540 (-)NCBI
mRatBN7.2456,798,326 - 56,849,081 (-)NCBI
RefSeq Acc Id: XM_039108108   ⟹   XP_038964036
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8457,791,024 - 57,815,226 (-)NCBI
mRatBN7.2456,824,444 - 56,849,766 (-)NCBI
RefSeq Acc Id: XM_063286482   ⟹   XP_063142552
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8457,763,789 - 57,977,318 (-)NCBI
RefSeq Acc Id: XM_063286483   ⟹   XP_063142553
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8457,791,024 - 57,814,786 (-)NCBI
RefSeq Acc Id: XM_063286484   ⟹   XP_063142554
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8457,791,024 - 57,814,960 (-)NCBI
RefSeq Acc Id: XM_063286485   ⟹   XP_063142555
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8457,791,024 - 57,814,540 (-)NCBI
RefSeq Acc Id: XM_063286486   ⟹   XP_063142556
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8457,791,024 - 57,977,318 (-)NCBI
RefSeq Acc Id: NP_001102695   ⟸   NM_001109225
- UniProtKB: D3ZPQ4 (UniProtKB/TrEMBL),   A6IEA4 (UniProtKB/TrEMBL),   A0A0G2JY61 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000070530   ⟸   ENSRNOT00000087407
Ensembl Acc Id: ENSRNOP00000010223   ⟸   ENSRNOT00000010223
RefSeq Acc Id: XP_038964031   ⟸   XM_039108103
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JY61 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038964034   ⟸   XM_039108106
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JY61 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038964033   ⟸   XM_039108105
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JY61 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038964032   ⟸   XM_039108104
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JY61 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038964035   ⟸   XM_039108107
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JY61 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038964036   ⟸   XM_039108108
- Peptide Label: isoform X2
- UniProtKB: D3ZPQ4 (UniProtKB/TrEMBL),   A6IEA4 (UniProtKB/TrEMBL),   A0A0G2JY61 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142552   ⟸   XM_063286482
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JY61 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142556   ⟸   XM_063286486
- Peptide Label: isoform X2
- UniProtKB: A6IEA4 (UniProtKB/TrEMBL),   D3ZPQ4 (UniProtKB/TrEMBL),   A0A0G2JY61 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142554   ⟸   XM_063286484
- Peptide Label: isoform X2
- UniProtKB: A6IEA4 (UniProtKB/TrEMBL),   D3ZPQ4 (UniProtKB/TrEMBL),   A0A0G2JY61 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142553   ⟸   XM_063286483
- Peptide Label: isoform X2
- UniProtKB: A6IEA4 (UniProtKB/TrEMBL),   D3ZPQ4 (UniProtKB/TrEMBL),   A0A0G2JY61 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142555   ⟸   XM_063286485
- Peptide Label: isoform X2
- UniProtKB: A6IEA4 (UniProtKB/TrEMBL),   D3ZPQ4 (UniProtKB/TrEMBL),   A0A0G2JY61 (UniProtKB/TrEMBL)
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZPQ4-F1-model_v2 AlphaFold D3ZPQ4 1-664 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692921
Promoter ID:EPDNEW_R3437
Type:multiple initiation site
Name:Zfp800_1
Description:zinc finger protein 800
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0455,527,105 - 55,527,165EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1560157 AgrOrtholog
BioCyc Gene G2FUF-45428 BioCyc
Ensembl Genes ENSRNOG00000007662 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000010223.8 UniProtKB/TrEMBL
  ENSRNOT00000087407 ENTREZGENE
  ENSRNOT00000087407.3 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Znf-C2H2_11 UniProtKB/TrEMBL
  ZNF800 UniProtKB/TrEMBL
  Znf_C2H2/integrase_DNA-bd UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
KEGG Report rno:500057 UniProtKB/TrEMBL
NCBI Gene 500057 ENTREZGENE
PANTHER PTHR21020 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 800 UniProtKB/TrEMBL
Pfam CCHC_ZFPM2 UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
  zf-C2H2_11 UniProtKB/TrEMBL
  zf-C2H2_assoc2 UniProtKB/TrEMBL
PhenoGen Zfp800 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000007662 RatGTEx
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A0G2JY61 ENTREZGENE, UniProtKB/TrEMBL
  A6IEA4 ENTREZGENE, UniProtKB/TrEMBL
  D3ZPQ4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2010-04-23 Zfp800  zinc finger protein 800  RGD1560157  similar to hypothetical protein LOC168850  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1560157  similar to hypothetical protein LOC168850   RGD1560157_predicted  similar to hypothetical protein LOC168850 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1560157_predicted  similar to hypothetical protein LOC168850 (predicted)  LOC500057  similar to hypothetical protein LOC168850  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC500057  similar to hypothetical protein LOC168850      Symbol and Name status set to provisional 70820 PROVISIONAL