Pabir2 (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | X | 137,908,653 - 137,935,153 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | X | 137,908,653 - 137,934,600 (-) | Ensembl | | | | GRCr8 | mRatBN7.2 | X | 132,989,124 - 133,015,625 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 132,989,124 - 133,015,580 (-) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | X | 135,149,167 - 135,175,114 (-) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 138,732,031 - 138,757,978 (-) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 136,297,700 - 136,323,647 (-) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 157,853,453 - 157,879,939 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 157,854,272 - 157,879,928 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 158,350,347 - 158,376,783 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | X | 152,478,768 - 152,505,246 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | X | 140,193,647 - 140,219,594 | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Cytogenetic Map | X | q36 | NCBI | | | | |
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PABIR2 (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | X | 134,769,566 - 134,797,205 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 134,769,566 - 134,797,232 (-) | Ensembl | | | hg38 | GRCh38 | GRCh37 | X | 133,903,596 - 133,931,235 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 133,731,262 - 133,758,378 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Celera | X | 134,290,355 - 134,318,021 (-) | NCBI | | Celera | | | Cytogenetic Map | X | q26.3 | NCBI | | | | | HuRef | X | 123,302,899 - 123,329,379 (-) | NCBI | | HuRef | | | CHM1_1 | X | 133,815,204 - 133,842,706 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 133,094,679 - 133,122,269 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Pabir2 (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | X | 52,332,292 - 52,358,728 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 52,332,292 - 52,358,682 (-) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | X | 53,243,415 - 53,269,850 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 53,243,415 - 53,269,805 (-) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | X | 50,596,592 - 50,622,982 (-) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 49,488,061 - 49,513,658 (-) | NCBI | | MGSCv36 | mm8 | | Celera | X | 40,668,449 - 40,695,187 (-) | NCBI | | Celera | | | Cytogenetic Map | X | A5 | NCBI | | | | | cM Map | X | 29.43 | NCBI | | | | |
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Pabir2 (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955473 | 208,697 - 231,838 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955473 | 207,755 - 231,781 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PABIR2 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | X | 134,205,009 - 134,232,247 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 134,208,607 - 134,235,784 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 123,920,228 - 123,946,120 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 134,216,272 - 134,241,898 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 134,216,312 - 134,241,887 (-) | Ensembl | | | panPan2 | panpan1.1 |
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PABIR2 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | X | 105,367,621 - 105,416,545 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | X | 105,200,746 - 105,416,596 (-) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | X | 91,506,991 - 91,527,288 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | X | 107,091,987 - 107,278,986 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 107,091,840 - 107,279,077 (-) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | X | 104,669,579 - 104,689,871 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 106,535,767 - 106,556,048 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 106,327,249 - 106,347,550 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Pabir2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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PABIR2 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | X | 110,593,937 - 110,617,787 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | X | 110,570,091 - 110,617,779 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | X | 126,460,757 - 126,481,778 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PABIR2 (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | X | 109,939,033 - 109,965,435 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | X | 109,941,606 - 109,964,434 (-) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666065 | 47,545,423 - 47,571,991 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pabir2 (Heterocephalus glaber - naked mole-rat) |
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Pabir2 (Rattus rattus - black rat) |
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