Advanced Search (OLGA)

Gene: Dipk1c (divergent protein kinase domain 1C) Rattus norvegicus

Analyze

Symbol:

Dipk1c

Name:

divergent protein kinase domain 1C

RGD ID:

1559694

Description:

Predicted to be located in endoplasmic reticulum membrane. Orthologous to human DIPK1C (divergent protein kinase domain 1C); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Fam69c; family with sequence similarity 69, member C; hypothetical protein LOC498891; LOC498891; RGD1559694; similar to hypothetical protein B230399E16; uncharacterized protein LOC498891

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DIPK1C (divergent protein kinase domain 1C)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Dipk1c (divergent protein kinase domain 1C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dipk1c (divergent protein kinase domain 1C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DIPK1C (divergent protein kinase domain 1C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DIPK1C (divergent protein kinase domain 1C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dipk1c (divergent protein kinase domain 1C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DIPK1C (divergent protein kinase domain 1C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DIPK1C (divergent protein kinase domain 1C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dipk1c (divergent protein kinase domain 1C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Dipk1c (divergent protein kinase domain 1C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	DIPK1C (divergent protein kinase domain 1C)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	DIPK1C (divergent protein kinase domain 1C)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Dipk1c (divergent protein kinase domain 1C)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG12038	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG12038	Alliance	DIOPT (InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	C53D5.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	C53D5.1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	dipk1c	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	dipk1c	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	dipk1c	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	80,362,854 - 80,384,774 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	18	80,362,982 - 80,386,551 (+)	Ensembl				GRCr8
mRatBN7.2	18	78,087,972 - 78,109,910 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	78,087,991 - 78,109,904 (+)	Ensembl				mRatBN7.2
Rnor_6.0	18	81,569,693 - 81,591,683 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	81,569,910 - 81,590,887 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	18	80,614,274 - 80,636,572 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	18	81,290,258 - 81,311,239 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	18	76,703,754 - 76,725,748 (+)	NCBI		Celera
Cytogenetic Map	18	q12.3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

Actein (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

alpha-Zearalanol (EXP)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bromobenzene (EXP)

Cuprizon (EXP)

dorsomorphin (ISO)

entinostat (ISO)

ethanol (ISO)

genistein (ISO)

gentamycin (EXP)

mercury dibromide (ISO)

methimazole (EXP)

methoxychlor (EXP)

methylmercury chloride (ISO)

N,N-diethyl-m-toluamide (EXP)

panobinostat (ISO)

paracetamol (EXP)

perfluorooctanoic acid (EXP)

permethrin (EXP)

phenylmercury acetate (ISO)

resveratrol (ISO)

SB 431542 (ISO)

sodium fluoride (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

tris(2-butoxyethyl) phosphate (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

endoplasmic reticulum membrane (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Dipk1c
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	80,362,854 - 80,384,774 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	18	80,362,982 - 80,386,551 (+)	Ensembl				GRCr8
mRatBN7.2	18	78,087,972 - 78,109,910 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	78,087,991 - 78,109,904 (+)	Ensembl				mRatBN7.2
Rnor_6.0	18	81,569,693 - 81,591,683 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	81,569,910 - 81,590,887 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	18	80,614,274 - 80,636,572 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	18	81,290,258 - 81,311,239 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	18	76,703,754 - 76,725,748 (+)	NCBI		Celera
Cytogenetic Map	18	q12.3	NCBI

DIPK1C
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	74,434,775 - 74,464,648 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	74,434,775 - 74,457,944 (-)	Ensembl			hg38	GRCh38
GRCh37	18	72,102,010 - 72,124,543 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	70,253,943 - 70,276,159 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	18	68,970,325 - 68,991,868 (-)	NCBI		Celera
Cytogenetic Map	18	q22.3	NCBI
HuRef	18	68,835,271 - 68,846,825 (-)	NCBI		HuRef
CHM1_1	18	72,098,286 - 72,119,826 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	18	74,662,448 - 74,692,347 (-)	NCBI		T2T-CHM13v2.0

Dipk1c
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	84,737,133 - 84,762,820 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	84,737,361 - 84,758,561 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	18	84,719,008 - 84,744,695 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	84,719,236 - 84,740,436 (+)	Ensembl			mm10	GRCm38
MGSCv37	18	84,889,634 - 84,909,828 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	18	84,854,435 - 84,874,629 (+)	NCBI		MGSCv36	mm8
Celera	18	85,784,451 - 85,804,962 (+)	NCBI		Celera
Cytogenetic Map	18	E4	NCBI
cM Map	18	57.53	NCBI

Dipk1c
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955402	57,878,727 - 57,899,315 (-)	NCBI	ChiLan1.0	ChiLan1.0

DIPK1C
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	91,970,297 - 91,993,494 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	77,662,920 - 77,686,116 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	67,820,362 - 67,843,515 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	71,102,421 - 71,123,798 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	71,102,421 - 71,123,802 (-)	Ensembl			panPan2	panpan1.1

DIPK1C
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	4,954,115 - 4,980,277 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	4,959,886 - 4,978,431 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	5,961,578 - 5,990,330 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	4,764,627 - 4,793,403 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
UMICH_Zoey_3.1	1	4,803,572 - 4,832,326 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	4,757,070 - 4,785,840 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	4,928,250 - 4,957,045 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Dipk1c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	18,726,505 - 18,748,124 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936616	4,047,635 - 4,069,253 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936616	4,058,786 - 4,069,254 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DIPK1C
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	149,611,380 - 149,629,078 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	149,611,232 - 149,629,777 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	165,484,719 - 165,502,574 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DIPK1C
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	5,432,911 - 5,456,470 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	5,433,556 - 5,454,091 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666060	20,426,032 - 20,450,517 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dipk1c
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624806	6,229,538 - 6,251,953 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Dipk1c
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	15	47,631,048 - 47,652,811 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Dipk1c
84 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	32
Count of miRNA genes:	26
Interacting mature miRNAs:	32
Transcripts:	ENSRNOT00000020858
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331733	Bp233	Blood pressure QTL 233	3.97196		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	25071126	83910656	Rat
2303584	Gluco55	Glucose level QTL 55	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	18	50795212	86134022	Rat
1331730	Scl27	Serum cholesterol level QTL 27	3.826		blood HDL cholesterol amount (VT:0000184)	serum high density lipoprotein cholesterol level (CMO:0000361)	18	54490801	86134022	Rat
1331741	Bp232	Blood pressure QTL 232	3.59112		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	23494057	85487725	Rat
738008	Hcar14	Hepatocarcinoma resistance QTL 14	4.3		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion number (CMO:0001462)	18	57825243	85493247	Rat
631834	Sach3	Saccharin preference QTL 3	3.9	0.01	consumption behavior trait (VT:0002069)	calculated saccharin drink intake volume (CMO:0001600)	18	38575919	83575919	Rat
634333	Pia19	Pristane induced arthritis QTL 19	3.4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	18	76272104	81806852	Rat
631518	Bw11	Body weight QTL 11	2.8		body mass (VT:0001259)	body weight (CMO:0000012)	18	36121626	81121626	Rat
6893683	Bw110	Body weight QTL 110	2.7	0.002	body mass (VT:0001259)	body weight (CMO:0000012)	18	45620306	86134022	Rat
8694366	Abfw8	Abdominal fat weight QTL 8	6.38	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	18	48915737	86134022	Rat
70172	Eae15	Experimental allergic encephalomyelitis QTL 15		0.001	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	18	79484311	84129249	Rat
7794793	Mcs34	Mammary carcinoma susceptibility QTL 34	1.54		mammary gland integrity trait (VT:0010552)	mammary tumor incidence/prevalence measurement (CMO:0000946)	18	65635567	85897775	Rat
9589041	Epfw12	Epididymal fat weight QTL 12	17.08	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	18	48915737	86134022	Rat
8694432	Bw165	Body weight QTL 165	3.81	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	18	48915737	86134022	Rat
1358193	Emca2	Estrogen-induced mammary cancer QTL 2	1.6		mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	18	65846447	86134022	Rat
1598832	Glom11	Glomerulus QTL 11	2.9		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	18	53266671	86134022	Rat
1600373	Mamtr6	Mammary tumor resistance QTL 6			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	18	19553532	85493247	Rat
1331770	Bp234	Blood pressure QTL 234	3.807		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	45620306	86134022	Rat
2303571	Bw92	Body weight QTL 92	3		body mass (VT:0001259)	body weight (CMO:0000012)	18	50795212	86134022	Rat
2303120	Mamtr8	Mammary tumor resistance QTL 8		0.001	mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	18	31610505	85493247	Rat
1578667	Bss21	Bone structure and strength QTL 21	3.5		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	18	12066482	85493247	Rat
724542	Kidm2	Kidney mass QTL 2	2.6		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	18	61446853	86134022	Rat
61367	Iddm4	Insulin dependent diabetes mellitus QTL 4	2.33	0.0074	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	18	40462383	85462383	Rat
1578661	Bss20	Bone structure and strength QTL 20	3.7		femur morphology trait (VT:0000559)	femoral neck cross-sectional area (CMO:0001697)	18	12066482	85493247	Rat
1331754	Bp230	Blood pressure QTL 230	4.61609		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	15642280	86134022	Rat

Markers in Region

BE098524

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	78,104,957 - 78,105,158 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	81,586,736 - 81,586,936	NCBI	Rnor6.0
Rnor_5.0	18	80,631,626 - 80,631,826	UniSTS	Rnor5.0
RGSC_v3.4	18	81,307,088 - 81,307,288	UniSTS	RGSC3.4
Celera	18	76,720,801 - 76,721,001	UniSTS
Cytogenetic Map	18	q12.3	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
7	12	62	139	61	58	43	4	43	6	177	93	11	119	26	74	15	16	16

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001432480	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001061354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_574179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000020858 ⟹ ENSRNOP00000020858

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	80,362,982 - 80,386,551 (+)	Ensembl
mRatBN7.2 Ensembl	18	78,087,991 - 78,109,904 (+)	Ensembl
Rnor_6.0 Ensembl	18	81,569,910 - 81,590,887 (+)	Ensembl

RefSeq Acc Id:

XM_574179 ⟹ XP_574179

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	80,362,854 - 80,384,774 (+)	NCBI
mRatBN7.2	18	78,087,972 - 78,109,910 (+)	NCBI
Rnor_6.0	18	81,569,693 - 81,591,683 (+)	NCBI
Rnor_5.0	18	80,614,274 - 80,636,572 (+)	NCBI
RGSC_v3.4	18	81,290,258 - 81,311,239 (+)	RGD

Sequence:

show sequence

GCGGAGAAGTGAGAGAGAGGCTTAGTCTTGGGGAAGAAAAGTGGAAAAGAAAGTGTGAAGGTGT
CCAGGGTGGGTAGGTGGCCGAAACCGGGAGCGGCGGATCCCCACGCAGTGCTGGGACTCTTACG
CGGCGCCCTAGGCCAGTTTCCCCTCCCGCCGCCCCTCCCCCTCCCCGCCTCTGGAGCTGCGGAG
CGGCGACCCGAGCGCAGGGACCGCGATGGCGCGAGCGGTGGGCGTGCGGGGCCGGGTTGCACGG
TACGGGCGCTGGCGGCGAGGCGCGCTCCTCGCCTTCGCCGCGTGGACCGCGGGCTGGGTGCTGG
CAGCCGCGCTGCTGCTCCGCGCACACCCGAGCGTCCTCTCAGAGCGCTGCACGGACGAGAAGAG
CCGGCGCATCCTGGCGGCGCTGTGCCGGGACTACCGTGGTGGCTGGCTCACAGGCGCCCTGTGC
GAGGACCTGTGTGTGGCTGGGGAGCTGCTGTACCAACGCTGCCTGTATTATGAGCGGGGTAAGA
AGGTGCTACAGGCCCAGTGGCGAGGTCAGACGGTTGTCCTCAAATCCAAGAGGGAGGCCTTCTC
CAGCTTCCCGCCCCTCAATCTGTTGGAGGAGGAAGCGGGGCCAGGTGCCCCGATCCCTGAGGCT
GAACTGCTCCTGATGGTGGCTGGGGAGGTCAAGAACACGCTAGGCTTGGAGCTGCCCAACAACA
GCATAGCCCCGCTGTGGCCGGCCAGGCAAGGTCCCGGCTGGCGCCAAGAGCTGGCCAGCGCGTG
GTCACTGCTCCAACAGGAGGAATATGTGTACTTCAGCCTGCTGCCAGATCTGAGTCGCCACATC
CTACCGGTGCTGGGATCCTGTGGTCACTTTTACGCAGTGGAATATTTGGCCGCCGGTAGCCCTC
ACCACAAGGCTCTCTTCCCACTGGATGATGCCGGCCAAGCCCAGGCTATTAGTCACATCGCCCT
CAGCTTCCTGGACATGGTGAGCCATTTCGACAGTGACTTCTCCCACCGCCTCCACCTCTGTGAT
GTCAAACCTGAGAACTTTGCCATCAAGAGGGACTTCACGGTGGTGGCTATTGACGTAGACATGG
CCTTTTTTGAGCCTAAAATGAGGGAGATCCTTGAGCAAAACTGCACGGGAGATGAAGACTGCAA
TTTCTTCGACTGTTTCTCCAAGTGTGATCTGCGAGTGAACAAGTGTGGAGCCCGGCGTGTCAAC
AGCAACTTGCAGGTCATCTGTGATAAAATATTCCAACACTGGTTCTCCTCATCACACAGGAGCC
CCGCCATCTCCCCGCAGCTTCAGCTGCAGCTACAGCAGGCCGTTCAGGAGTGTGCTCACCACGG
GGACCCCTCTGGGAATTCCTGGACAGCCTCCTCCAGTGTGTTCTGGAAGCTTAGATGGCTCTTG
CAGGCCACTCTGAAAGAGCTGCAGGAGGTGGAGAAGTAGCCTTTTTCTTGCTTTGGTCATCAAG
AGTGGACGGAAGTGACTTTCAATCGACTTCTCCAGTAGTCACTATGCAAATGAGCTGTCAGAGG
TGTTGGAGAGCCCTTCTGAAGTGTGCTGTGACACGGACCTCTCTTGCCCCTGCCTGGCTTGGTT
TGATCTTGTTTCCTGGCGACCTCTGGCCTGTCACCCCTTCAGAAGTGACCAAAGAGAGGAGTTT
CATCAGAGTTGCCAGTGTGCAACCCTCTGCGGACTGTACATACCTTGCCATGAGAGACAAGAGG
AAGCTGCCCTTCCATGCTAGCCACTAGCAAGCTGAAGAGTGACTGTGGGCATGAGATGAACGTG
TTTGCAAATAATTGTGTGCACCTGTGCATACGTGTGCACCCGTGAGTGCATATGAGCACGTTTG
GATACATGAATGTGTATTGAATATACACAAGTATGTTGTGTGTAAATACACATGGGCTTGTGTG
TGGGATTACACATGCTCTCATAATTATGAGCATTCCTGTGTGTGTGCGTGCGCGCACGTGTGTG
TGAGCGCATGCTTTTAGGCTTGTGCACACATCCATGAACCAGTCACTGTGCCTGTGATTCTGTG
CTCCTGGATGAATCGATGTGAGTCCACTCAGAAGTGCATGCATGTGTAACATCCAGAGGCGAGC
AAGTGGGTGGGCACTCGGAGCCTGTGTGGAACGGTGGCTTTTCAATGTGTCCCTAGGAGTCTTG
CCTAGCTAGCTGGCAAAGAAGTGTTACTTTTTTCTGGAATTAAATGCAATAAAACGTGGTATCC
TTT

hide sequence

Protein Sequences


Protein RefSeqs	NP_001419409	(Get FASTA)	NCBI Sequence Viewer
	XP_574179	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL75183	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000020858
	ENSRNOP00000020858.5

RefSeq Acc Id:

XP_574179 ⟸ XM_574179

- Sequence:

show sequence

MARAVGVRGRVARYGRWRRGALLAFAAWTAGWVLAAALLLRAHPSVLSERCTDEKSRRILAALC
RDYRGGWLTGALCEDLCVAGELLYQRCLYYERGKKVLQAQWRGQTVVLKSKREAFSSFPPLNLL
EEEAGPGAPIPEAELLLMVAGEVKNTLGLELPNNSIAPLWPARQGPGWRQELASAWSLLQQEEY
VYFSLLPDLSRHILPVLGSCGHFYAVEYLAAGSPHHKALFPLDDAGQAQAISHIALSFLDMVSH
FDSDFSHRLHLCDVKPENFAIKRDFTVVAIDVDMAFFEPKMREILEQNCTGDEDCNFFDCFSKC
DLRVNKCGARRVNSNLQVICDKIFQHWFSSSHRSPAISPQLQLQLQQAVQECAHHGDPSGNSWT
ASSSVFWKLRWLLQATLKELQEVEK

hide sequence

Ensembl Acc Id:

ENSRNOP00000020858 ⟸ ENSRNOT00000020858

Protein Domains

FAM69 N-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZJ65-F1-model_v2	AlphaFold	D3ZJ65	1-409	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1559694	AgrOrtholog
BioCyc Gene	G2FUF-6748	BioCyc
Ensembl Genes	ENSRNOG00000015448	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000020858	ENTREZGENE
	ENSRNOT00000020858.7	UniProtKB/TrEMBL
InterPro	FAM69_N	UniProtKB/TrEMBL
	Uncharacterised_FAM69A_C	UniProtKB/TrEMBL
KEGG Report	rno:498891	UniProtKB/TrEMBL
NCBI Gene	498891	ENTREZGENE
PANTHER	DIVERGENT PROTEIN KINASE DOMAIN 1C	UniProtKB/TrEMBL
	UNCHARACTERIZED	UniProtKB/TrEMBL
Pfam	PIP49_C	UniProtKB/TrEMBL
	PIP49_N	UniProtKB/TrEMBL
PhenoGen	Dipk1c	PhenoGen
RatGTEx	ENSRNOG00000015448	RatGTEx
SMART	PIP49_N	UniProtKB/TrEMBL
UniProt	D3ZJ65	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-10-08	Dipk1c	divergent protein kinase domain 1C	Fam69c	family with sequence similarity 69, member C	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2010-02-12	Fam69c	family with sequence similarity 69, member C	RGD1559694	similar to hypothetical protein B230399E16	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1559694	similar to hypothetical protein B230399E16	RGD1559694_predicted	similar to hypothetical protein B230399E16 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1559694_predicted	similar to hypothetical protein B230399E16 (predicted)	LOC498891	similar to hypothetical protein B230399E16	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC498891	similar to hypothetical protein B230399E16			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message