Symbol:
Purb
Name:
purine rich element binding protein B
RGD ID:
1559465
Description:
Enables DNA-binding transcription repressor activity, RNA polymerase II-specific; mRNA regulatory element binding translation repressor activity; and purine-rich negative regulatory element binding activity. Involved in negative regulation of transcription by RNA polymerase II. Is active in nucleus. Orthologous to human PURB (purine rich element binding protein B); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; amitrole.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
pur-beta; purine-rich element-binding protein B; transcription factor Pur-beta; transcriptional activator protein Pur-beta; transcriptional regulator protein Pur-beta
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 14 85,556,296 - 85,558,779 (-) NCBI GRCr8 mRatBN7.2 14 81,342,374 - 81,344,857 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 14 81,336,448 - 81,351,432 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 14 85,743,668 - 85,746,151 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 14 86,983,466 - 86,985,949 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 14 83,433,062 - 83,435,545 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 14 86,736,876 - 86,739,335 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 14 86,736,878 - 86,739,335 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 14 80,371,417 - 80,373,876 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 14 87,230,346 - 87,232,805 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 14 80,223,695 - 80,226,154 (-) NCBI Celera Cytogenetic Map 14 q21 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Purb Rat 1,2-dichloroethane decreases expression ISO Purb (Mus musculus) 6480464 ethylene dichloride results in decreased expression of PURB mRNA CTD PMID:28960355 Purb Rat 1,2-dimethylhydrazine multiple interactions ISO Purb (Mus musculus) 6480464 Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in increased expression of PURB mRNA] CTD PMID:22206623 Purb Rat 1,2-dimethylhydrazine increases expression ISO Purb (Mus musculus) 6480464 1 and 2-Dimethylhydrazine results in increased expression of PURB mRNA CTD PMID:22206623 Purb Rat 17alpha-ethynylestradiol increases expression ISO Purb (Mus musculus) 6480464 Ethinyl Estradiol results in increased expression of PURB mRNA CTD PMID:17942748 Purb Rat 17alpha-ethynylestradiol multiple interactions ISO Purb (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of PURB mRNA CTD PMID:17942748 Purb Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO Purb (Mus musculus) 6480464 Tetrachlorodibenzodioxin results in decreased expression of PURB mRNA CTD PMID:24058054 Purb Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of PURB mRNA CTD PMID:34747641 Purb Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO Purb (Mus musculus) 6480464 Tetrachlorodibenzodioxin affects the expression of PURB mRNA CTD PMID:21570461 Purb Rat 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO Purb (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of PURB mRNA CTD PMID:17942748 Purb Rat 4,4'-sulfonyldiphenol affects expression ISO Purb (Mus musculus) 6480464 bisphenol S affects the expression of PURB mRNA CTD PMID:39298647 Purb Rat 4,4'-sulfonyldiphenol affects methylation ISO Purb (Mus musculus) 6480464 bisphenol S affects the methylation of PURB gene CTD PMID:31683443 Purb Rat 6-propyl-2-thiouracil increases expression EXP 6480464 Propylthiouracil results in increased expression of PURB mRNA CTD PMID:30047161 Purb Rat aflatoxin B1 increases expression ISO Purb (Mus musculus) 6480464 Aflatoxin B1 results in increased expression of PURB mRNA CTD PMID:19770486 Purb Rat all-trans-retinoic acid increases expression ISO Purb (Mus musculus) 6480464 Tretinoin results in increased expression of PURB mRNA CTD PMID:16788091 Purb Rat amitrole increases expression EXP 6480464 Amitrole results in increased expression of PURB mRNA CTD PMID:30047161 Purb Rat antirheumatic drug decreases expression ISO PURB (Homo sapiens) 6480464 Antirheumatic Agents results in decreased expression of PURB mRNA CTD PMID:24449571 Purb Rat Aroclor 1254 decreases expression ISO Purb (Mus musculus) 6480464 Chlorodiphenyl (54% Chlorine) results in decreased expression of PURB mRNA CTD PMID:23650126 Purb Rat atrazine increases expression ISO PURB (Homo sapiens) 6480464 Atrazine results in increased expression of PURB mRNA CTD PMID:22378314 Purb Rat benzene increases expression ISO PURB (Homo sapiens) 6480464 Benzene results in increased expression of PURB mRNA CTD PMID:15929907 Purb Rat benzo[a]pyrene increases expression ISO Purb (Mus musculus) 6480464 Benzo(a)pyrene results in increased expression of PURB mRNA CTD PMID:20504355 and PMID:22228805 Purb Rat benzo[a]pyrene decreases expression ISO PURB (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased expression of PURB mRNA CTD PMID:26238291 Purb Rat bis(2-ethylhexyl) phthalate decreases expression ISO Purb (Mus musculus) 6480464 Diethylhexyl Phthalate results in decreased expression of PURB mRNA CTD PMID:33754040 Purb Rat bisphenol A affects expression EXP 6480464 bisphenol A affects the expression of PURB mRNA CTD PMID:25181051 Purb Rat bisphenol A increases expression ISO PURB (Homo sapiens) 6480464 bisphenol A results in increased expression of PURB protein CTD PMID:34186270 Purb Rat bisphenol A decreases expression ISO PURB (Homo sapiens) 6480464 bisphenol A results in decreased expression of PURB protein CTD PMID:31675489 and PMID:33376534 Purb Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of PURB mRNA CTD PMID:34947998 Purb Rat bisphenol A affects methylation ISO Purb (Mus musculus) 6480464 bisphenol A affects the methylation of PURB promoter CTD PMID:27334623 Purb Rat bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of PURB mRNA CTD PMID:29097150 and PMID:33296240 Purb Rat cadmium dichloride increases expression ISO PURB (Homo sapiens) 6480464 Cadmium Chloride results in increased expression of PURB mRNA CTD PMID:38382870 Purb Rat caffeine increases phosphorylation ISO PURB (Homo sapiens) 6480464 Caffeine results in increased phosphorylation of PURB protein CTD PMID:35688186 Purb Rat carbon nanotube increases expression ISO Purb (Mus musculus) 6480464 Nanotubes more ... CTD PMID:25554681 Purb Rat chloropicrin decreases expression ISO PURB (Homo sapiens) 6480464 chloropicrin results in decreased expression of PURB mRNA CTD PMID:26352163 Purb Rat cocaine affects expression EXP 6480464 Cocaine affects the expression of PURB mRNA CTD PMID:20187946 Purb Rat coumarin increases phosphorylation ISO PURB (Homo sapiens) 6480464 coumarin results in increased phosphorylation of PURB protein CTD PMID:35688186 Purb Rat cyclosporin A increases expression ISO PURB (Homo sapiens) 6480464 Cyclosporine results in increased expression of PURB mRNA CTD PMID:20106945 Purb Rat Dibutyl phosphate affects expression ISO PURB (Homo sapiens) 6480464 di-n-butylphosphoric acid affects the expression of PURB mRNA CTD PMID:37042841 Purb Rat dibutyl phthalate increases expression EXP 6480464 Dibutyl Phthalate results in increased expression of PURB mRNA CTD PMID:21266533 Purb Rat dibutyl phthalate increases expression ISO Purb (Mus musculus) 6480464 Dibutyl Phthalate results in increased expression of PURB mRNA CTD PMID:21266533 Purb Rat disodium selenite increases expression ISO PURB (Homo sapiens) 6480464 Sodium Selenite results in increased expression of PURB mRNA CTD PMID:18175754 Purb Rat dorsomorphin multiple interactions ISO PURB (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of PURB mRNA CTD PMID:27188386 Purb Rat doxorubicin decreases expression ISO Purb (Mus musculus) 6480464 Doxorubicin results in decreased expression of PURB mRNA CTD PMID:19277126 Purb Rat epoxiconazole decreases expression ISO Purb (Mus musculus) 6480464 epoxiconazole results in decreased expression of PURB mRNA CTD PMID:35436446 Purb Rat fenthion increases expression ISO Purb (Mus musculus) 6480464 Fenthion results in increased expression of PURB mRNA CTD PMID:34813904 Purb Rat finasteride increases expression EXP 6480464 Finasteride results in increased expression of PURB mRNA CTD PMID:24136188 Purb Rat flutamide increases expression EXP 6480464 Flutamide results in increased expression of PURB mRNA CTD PMID:24136188 Purb Rat folic acid multiple interactions ISO Purb (Mus musculus) 6480464 Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in increased expression of PURB mRNA] CTD PMID:22206623 Purb Rat FR900359 increases phosphorylation ISO PURB (Homo sapiens) 6480464 FR900359 results in increased phosphorylation of PURB protein CTD PMID:37730182 Purb Rat haloperidol decreases expression ISO PURB (Homo sapiens) 6480464 Haloperidol results in decreased expression of PURB protein CTD PMID:34122009 Purb Rat leflunomide increases expression EXP 6480464 leflunomide results in increased expression of PURB mRNA CTD PMID:24136188 Purb Rat leflunomide decreases expression ISO PURB (Homo sapiens) 6480464 leflunomide results in decreased expression of PURB mRNA CTD PMID:28988120 Purb Rat mercury atom increases expression ISO Purb (Mus musculus) 6480464 Mercury analog results in increased expression of PURB mRNA CTD PMID:25056781 Purb Rat mercury(0) increases expression ISO Purb (Mus musculus) 6480464 Mercury analog results in increased expression of PURB mRNA CTD PMID:25056781 Purb Rat methamphetamine increases expression ISO Purb (Mus musculus) 6480464 Methamphetamine results in increased expression of PURB mRNA CTD PMID:26307267 Purb Rat methidathion increases expression ISO Purb (Mus musculus) 6480464 methidathion results in increased expression of PURB mRNA CTD PMID:34813904 Purb Rat methimazole increases expression EXP 6480464 Methimazole results in increased expression of PURB mRNA CTD PMID:30047161 Purb Rat miconazole decreases expression ISO Purb (Mus musculus) 6480464 Miconazole results in decreased expression of PURB mRNA CTD PMID:27462272 Purb Rat nitrates multiple interactions ISO Purb (Mus musculus) 6480464 [Particulate Matter results in increased abundance of Nitrates] which results in increased expression of PURB mRNA CTD PMID:35964746 Purb Rat paracetamol affects expression ISO Purb (Mus musculus) 6480464 Acetaminophen affects the expression of PURB mRNA CTD PMID:17562736 Purb Rat phenobarbital affects expression ISO Purb (Mus musculus) 6480464 Phenobarbital affects the expression of PURB mRNA CTD PMID:23091169 Purb Rat phenylmercury acetate decreases expression ISO PURB (Homo sapiens) 6480464 Phenylmercuric Acetate results in decreased expression of PURB mRNA CTD PMID:26272509 Purb Rat phenylmercury acetate multiple interactions ISO PURB (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of PURB mRNA CTD PMID:27188386 Purb Rat propiconazole increases expression EXP 6480464 propiconazole results in increased expression of PURB mRNA CTD PMID:30047161 Purb Rat rotenone increases expression EXP 6480464 Rotenone results in increased expression of PURB mRNA CTD PMID:19013527 Purb Rat SB 431542 multiple interactions ISO PURB (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of PURB mRNA CTD PMID:27188386 Purb Rat sodium arsenite increases expression ISO PURB (Homo sapiens) 6480464 sodium arsenite results in increased expression of PURB mRNA CTD PMID:38568856 Purb Rat sodium fluoride decreases expression ISO Purb (Mus musculus) 6480464 Sodium Fluoride results in decreased expression of PURB protein CTD PMID:28918527 Purb Rat Soman increases expression EXP 6480464 Soman results in increased expression of PURB mRNA CTD PMID:19281266 Purb Rat sulfadimethoxine increases expression EXP 6480464 Sulfadimethoxine results in increased expression of PURB mRNA CTD PMID:30047161 Purb Rat tetrachloromethane multiple interactions EXP 6480464 Carbon Tetrachloride promotes the reaction [PURB protein binds to LGALS3 promoter] CTD PMID:16309856 Purb Rat thimerosal decreases expression ISO PURB (Homo sapiens) 6480464 Thimerosal results in decreased expression of PURB mRNA CTD PMID:27188386 Purb Rat titanium dioxide decreases expression ISO Purb (Mus musculus) 6480464 titanium dioxide results in decreased expression of PURB mRNA CTD PMID:23557971 Purb Rat titanium dioxide decreases methylation ISO Purb (Mus musculus) 6480464 titanium dioxide results in decreased methylation of PURB gene CTD PMID:35295148 Purb Rat toluene decreases expression EXP 6480464 Toluene results in decreased expression of PURB mRNA CTD PMID:22967744 Purb Rat torcetrapib increases expression ISO PURB (Homo sapiens) 6480464 torcetrapib results in increased expression of PURB mRNA CTD PMID:23228038 Purb Rat tungsten decreases expression ISO Purb (Mus musculus) 6480464 Tungsten results in decreased expression of PURB mRNA CTD PMID:30912803 Purb Rat urethane decreases expression ISO PURB (Homo sapiens) 6480464 Urethane results in decreased expression of PURB mRNA CTD PMID:28818685 Purb Rat valproic acid decreases expression ISO PURB (Homo sapiens) 6480464 Valproic Acid results in decreased expression of PURB mRNA CTD PMID:23179753 Purb Rat valproic acid decreases expression EXP 6480464 Valproic Acid results in decreased expression of PURB mRNA CTD PMID:29427782 Purb Rat valproic acid affects expression ISO PURB (Homo sapiens) 6480464 Valproic Acid affects the expression of PURB mRNA CTD PMID:25979313 Purb Rat zinc atom multiple interactions ISO PURB (Homo sapiens) 6480464 [PCI 5002 co-treated with Zinc] results in increased expression of PURB mRNA CTD PMID:18593933 Purb Rat zinc(0) multiple interactions ISO PURB (Homo sapiens) 6480464 [PCI 5002 co-treated with Zinc] results in increased expression of PURB mRNA CTD PMID:18593933
1,2-dichloroethane (ISO) 1,2-dimethylhydrazine (ISO) 17alpha-ethynylestradiol (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 4,4'-sulfonyldiphenol (ISO) 6-propyl-2-thiouracil (EXP) aflatoxin B1 (ISO) all-trans-retinoic acid (ISO) amitrole (EXP) antirheumatic drug (ISO) Aroclor 1254 (ISO) atrazine (ISO) benzene (ISO) benzo[a]pyrene (ISO) bis(2-ethylhexyl) phthalate (ISO) bisphenol A (EXP,ISO) cadmium dichloride (ISO) caffeine (ISO) carbon nanotube (ISO) chloropicrin (ISO) cocaine (EXP) coumarin (ISO) cyclosporin A (ISO) Dibutyl phosphate (ISO) dibutyl phthalate (EXP,ISO) disodium selenite (ISO) dorsomorphin (ISO) doxorubicin (ISO) epoxiconazole (ISO) fenthion (ISO) finasteride (EXP) flutamide (EXP) folic acid (ISO) FR900359 (ISO) haloperidol (ISO) leflunomide (EXP,ISO) mercury atom (ISO) mercury(0) (ISO) methamphetamine (ISO) methidathion (ISO) methimazole (EXP) miconazole (ISO) nitrates (ISO) paracetamol (ISO) phenobarbital (ISO) phenylmercury acetate (ISO) propiconazole (EXP) rotenone (EXP) SB 431542 (ISO) sodium arsenite (ISO) sodium fluoride (ISO) Soman (EXP) sulfadimethoxine (EXP) tetrachloromethane (EXP) thimerosal (ISO) titanium dioxide (ISO) toluene (EXP) torcetrapib (ISO) tungsten (ISO) urethane (ISO) valproic acid (EXP,ISO) zinc atom (ISO) zinc(0) (ISO)
Molecular Function
DNA binding (IEA) DNA-binding transcription factor activity (IEA,ISO) DNA-binding transcription factor activity, RNA polymerase II-specific (IBA) DNA-binding transcription factor binding (IEA,ISO,ISS) DNA-binding transcription repressor activity, RNA polymerase II-specific (IDA,IEA,ISO,ISS) double-stranded DNA binding (IEA,ISO) mRNA binding (IEA,ISO,ISS) mRNA regulatory element binding translation repressor activity (IDA) protein binding (ISO) purine-rich negative regulatory element binding (IBA,IDA,IEA) RNA binding (IBA,IEA,ISO) RNA polymerase II transcription regulatory region sequence-specific DNA binding (IBA,IEA,ISO) single-stranded DNA binding (IEA,ISO,ISS) SMAD binding (IEA,ISO) structural constituent of ribosome (IBA,IEA)
Purb Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 14 85,556,296 - 85,558,779 (-) NCBI GRCr8 mRatBN7.2 14 81,342,374 - 81,344,857 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 14 81,336,448 - 81,351,432 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 14 85,743,668 - 85,746,151 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 14 86,983,466 - 86,985,949 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 14 83,433,062 - 83,435,545 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 14 86,736,876 - 86,739,335 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 14 86,736,878 - 86,739,335 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 14 80,371,417 - 80,373,876 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 14 87,230,346 - 87,232,805 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 14 80,223,695 - 80,226,154 (-) NCBI Celera Cytogenetic Map 14 q21 NCBI
PURB Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 7 44,876,299 - 44,885,530 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 7 44,876,299 - 44,885,530 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 7 44,915,898 - 44,925,129 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 7 44,882,417 - 44,891,485 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 7 44,689,133 - 44,698,200 NCBI Celera 7 45,014,669 - 45,023,741 (-) NCBI Celera Cytogenetic Map 7 p13 NCBI HuRef 7 44,801,230 - 44,810,302 (-) NCBI HuRef CHM1_1 7 44,920,237 - 44,929,309 (-) NCBI CHM1_1 T2T-CHM13v2.0 7 45,036,709 - 45,045,943 (-) NCBI T2T-CHM13v2.0 CRA_TCAGchr7v2 7 44,955,325 - 44,964,397 (-) NCBI
Purb Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 11 6,417,599 - 6,426,076 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 11 6,417,599 - 6,425,917 (-) Ensembl GRCm39 Ensembl GRCm38 11 6,467,599 - 6,476,076 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 11 6,467,599 - 6,475,917 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 11 6,374,776 - 6,375,920 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 11 6,374,776 - 6,375,920 (-) NCBI MGSCv36 mm8 Celera 11 6,960,150 - 6,961,293 (-) NCBI Celera Cytogenetic Map 11 A1 NCBI cM Map 11 4.16 NCBI
Purb Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 NW_004955456 7,322,973 - 7,323,529 (+) NCBI ChiLan1.0 ChiLan1.0
PURB Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 6 49,789,512 - 49,802,328 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 7 98,114,250 - 98,127,055 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 7 45,590,183 - 45,600,089 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 7 45,659,121 - 45,673,991 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 7 45,667,233 - 45,668,159 (-) Ensembl panpan1.1 panPan2
PURB Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Dog10K_Boxer_Tasha 16 2,512,329 - 2,520,763 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 16 14,340,299 - 14,348,729 (+) NCBI ROS_Cfam_1.0 UNSW_CanFamBas_1.0 16 13,973,590 - 13,982,018 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 16 13,952,878 - 13,961,316 (+) NCBI UU_Cfam_GSD_1.0
Purb
PURB Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 18 50,510,182 - 50,511,108 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 18 50,510,010 - 50,518,965 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 18 55,333,599 - 55,342,149 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
PURB Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 21 13,796,087 - 13,805,162 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 21 13,796,118 - 13,797,056 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666062 8,731,839 - 8,741,238 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Purb
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Predicted Target Of
Count of predictions: 42 Count of miRNA genes: 41 Interacting mature miRNAs: 42 Transcripts: ENSRNOT00000009214 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
2313089 Bss81 Bone structure and strength QTL 81 3.4 0.0001 body length (VT:0001256) body length, nose to rump (CMO:0000079) 14 37669719 82669719 Rat 9590294 Uminl4 Urine mineral level QTL 4 5.66 0.001 urine mineral amount (VT:0015086) urine electrolyte level (CMO:0000593) 14 55624247 100624247 Rat 1582236 Gluco22 Glucose level QTL 22 3.3 0.0164 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 14 73415323 92554092 Rat 631213 Bw60 Body weight QTL60 4.51 retroperitoneal fat pad mass (VT:0010430) retroperitoneal fat pad weight to body weight ratio (CMO:0000635) 14 79950921 95876975 Rat 2300197 Scl59 Serum cholesterol level QTL 59 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 14 55147478 100147478 Rat 70153 Bp59 Blood pressure QTL 59 3.2 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 14 68757796 83368335 Rat 631523 Pia13 Pristane induced arthritis QTL 13 3.3 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 14 40793460 98037301 Rat 1582259 Gluco23 Glucose level QTL 23 3.1 0.0008 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) 14 70053989 104886043 Rat 1582197 Gluco27 Glucose level QTL 27 3.4 0.0006 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) 14 73415323 92554092 Rat 2313100 Bss82 Bone structure and strength QTL 82 3 0.0001 tibia size trait (VT:0100001) tibia midshaft cross-sectional area (CMO:0001717) 14 37669719 82669719 Rat 634328 Hc5 Hypercalciuria QTL 5 2.3 urine calcium amount (VT:0002985) urine calcium excretion rate (CMO:0000763) 14 58184885 103184885 Rat 1582250 Gluco26 Glucose level QTL 26 3.3 0.0009 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 14 73415323 95876975 Rat 2317879 Alcrsp27 Alcohol response QTL 27 3.3 0.63 response to alcohol trait (VT:0010489) duration of loss of righting reflex (CMO:0002289) 14 56631369 101631369 Rat 1641900 Alcrsp11 Alcohol response QTL 11 alcohol metabolism trait (VT:0015089) blood ethanol level (CMO:0000535) 14 70053989 104886043 Rat 631839 Niddm37 Non-insulin dependent diabetes mellitus QTL 37 3.37 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 14 11030622 95876975 Rat 1582255 Gluco29 Glucose level QTL 29 3.1 0.0025 blood glucose amount (VT:0000188) absolute change in blood glucose level area under curve (CMO:0002034) 14 73415323 92554092 Rat 9589034 Epfw11 Epididymal fat weight QTL 11 6 0.001 epididymal fat pad mass (VT:0010421) epididymal fat pad weight to body weight ratio (CMO:0000658) 14 55624247 100624247 Rat 1582209 Gluco20 Glucose level QTL 20 3.8 0.0005 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 14 73415323 92554092 Rat 2313048 Bss84 Bone structure and strength QTL 84 3.1 0.0001 tibia strength trait (VT:1000284) tibia total energy absorbed before break (CMO:0001736) 14 37669719 82669719 Rat 1300136 Rf22 Renal function QTL 22 3.9 renal blood flow trait (VT:2000006) absolute change in renal vascular resistance (CMO:0001900) 14 42262529 95023211 Rat 1549834 Scl45 Serum cholesterol level QTL 45 5.8 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 14 50023211 95023211 Rat 738037 Hcas6 Hepatocarcinoma susceptibility QTL 6 2.93 liver integrity trait (VT:0010547) liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464) 14 39057237 83368335 Rat 2313084 Bss83 Bone structure and strength QTL 83 2.9 0.0001 tibia size trait (VT:0100001) tibia midshaft endosteal cross-sectional area (CMO:0001716) 14 37669719 82669719 Rat
SGC32761
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 14 81,342,422 - 81,342,548 (+) MAPPER mRatBN7.2 Rnor_6.0 14 86,736,901 - 86,737,026 NCBI Rnor6.0 Rnor_5.0 14 80,371,442 - 80,371,567 UniSTS Rnor5.0 RGSC_v3.4 14 87,230,371 - 87,230,496 UniSTS RGSC3.4 Celera 14 80,223,720 - 80,223,845 UniSTS Cytogenetic Map 14 q21 UniSTS
AA859841
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 14 81,343,936 - 81,344,135 (+) MAPPER mRatBN7.2 Rnor_6.0 14 86,738,415 - 86,738,613 NCBI Rnor6.0 Rnor_5.0 14 80,372,956 - 80,373,154 UniSTS Rnor5.0 RGSC_v3.4 14 87,231,885 - 87,232,083 UniSTS RGSC3.4 Celera 14 80,225,234 - 80,225,432 UniSTS RH 3.4 Map 14 579.0 UniSTS Cytogenetic Map 14 q21 UniSTS
BI284455
Rat Assembly Chr Position (strand) Source JBrowse GRCr8 14 85,556,803 - 85,556,970 (+) Marker Load Pipeline mRatBN7.2 14 81,342,881 - 81,343,048 (+) MAPPER mRatBN7.2 Rnor_6.0 14 86,737,360 - 86,737,526 NCBI Rnor6.0 Rnor_5.0 14 80,371,901 - 80,372,067 UniSTS Rnor5.0 RGSC_v3.4 14 87,230,830 - 87,230,996 UniSTS RGSC3.4 Celera 14 80,224,179 - 80,224,345 UniSTS RH 3.4 Map 14 586.6 UniSTS Cytogenetic Map 14 q21 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
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Ensembl Acc Id:
ENSRNOT00000078282 ⟹ ENSRNOP00000069267
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source Rnor_6.0 Ensembl 14 86,736,878 - 86,739,335 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000096069 ⟹ ENSRNOP00000083797
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 14 81,336,448 - 81,351,432 (-) Ensembl
RefSeq Acc Id:
NM_001017503 ⟹ NP_001017503
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 14 85,556,296 - 85,558,779 (-) NCBI mRatBN7.2 14 81,342,374 - 81,344,857 (-) NCBI Rnor_6.0 14 86,736,876 - 86,739,335 (-) NCBI Rnor_5.0 14 80,371,417 - 80,373,876 (-) NCBI RGSC_v3.4 14 87,230,346 - 87,232,805 (-) RGD Celera 14 80,223,695 - 80,226,154 (-) RGD
Sequence:
GGCGGCGGCGAGGCGGCGGCCGAGAAGATGGCGGACGGCGACAGCGGCAGCGAGCGCGGTGGCGGCGGGCCCGGCAGCTTCCAGCCCGCGCCCCGCGGCGGCGGAGGGCCTGGCGGCGAGCAGGAGAC
hide sequence
RefSeq Acc Id:
NP_001017503 ⟸ NM_001017503
- UniProtKB:
A0A8I5ZZX6 (UniProtKB/TrEMBL), A6IKU6 (UniProtKB/TrEMBL)
- Sequence:
MADGDSGSERGGGGPGSFQPAPRGGGGPGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLV
hide sequence
Ensembl Acc Id:
ENSRNOP00000069267 ⟸ ENSRNOT00000078282
Ensembl Acc Id:
ENSRNOP00000083797 ⟸ ENSRNOT00000096069
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2008-03-04
Purb
purine rich element binding protein B
pur-beta
transcription factor Pur-beta
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2006-02-09
pur-beta
transcription factor Pur-beta
Symbol and Name status set to provisional
70820 PROVISIONAL
