Gene: Magix (MAGI family member, X-linked) Rattus norvegicus
Analyze
Symbol:
Magix
Name:
MAGI family member, X-linked
RGD ID:
1549729
Description:
Orthologous to human MAGIX (MAGI family member, X-linked); INTERACTS WITH (+)-schisandrin B; 1-naphthyl isothiocyanate; 2,2',4,4'-Tetrabromodiphenyl ether.
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Previously known as:
LOC317379; PDZ domain-containing protein MAGIX; similar to Pdz-containing protein
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
MAGIX (MAGI family member, X-linked) HGNC
Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB
Mus musculus (house mouse):
Magix (MAGI family member, X-linked) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
MAGIX (MAGI family member, X-linked) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
LOC612555 (MAGI family member, X-linked) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Magix (MAGI family member, X-linked) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
MAGIX (MAGI family member, X-linked) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
MAGIX (MAGI family member, X-linked) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Magix (MAGI family member, X-linked) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Rattus rattus (black rat):
Magix (MAGI family member, X-linked) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Other homologs 2
Homo sapiens (human):
OR2I1 (olfactory receptor family 2 subfamily I member 1 (gene/pseudogene)) HGNC
OMA
Alliance orthologs 3
Mus musculus (house mouse):
Magix (MAGI family member, X-linked)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Homo sapiens (human):
MAGIX (MAGI family member, X-linked)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 X 17,496,092 - 17,504,370 (+) NCBI GRCr8 GRCr8 GRCr8 GRCr8 Ensembl X 17,496,225 - 17,504,369 (+) Ensembl GRCr8 mRatBN7.2 X 14,824,114 - 14,832,466 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl X 14,824,188 - 14,831,045 (+) Ensembl mRatBN7.2 UTH_Rnor_SHR_Utx X 19,638,353 - 19,645,187 (+) NCBI UTH_Rnor_SHR_Utx UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 X 20,437,944 - 20,444,782 (-) NCBI UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 X 16,703,089 - 16,709,931 (-) NCBI UTH_Rnor_WKY_Bbb_1.0 UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 X 15,669,191 - 15,676,051 (+) NCBI Rnor_6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl X 15,669,191 - 15,676,050 (+) Ensembl rn6 Rnor6.0 Rnor_5.0 X 16,460,417 - 16,467,277 (+) NCBI Rnor_5.0 Rnor_5.0 rn5 RGSC_v3.4 X 26,865,047 - 26,871,907 (+) NCBI RGSC_v3.4 RGSC_v3.4 rn4 Celera X 14,907,513 - 14,914,379 (+) NCBI Celera Cytogenetic Map X q12 NCBI
JBrowse:
Only show annotations with direct experimental evidence (0 objects hidden)
Magix Rat (+)-schisandrin B multiple interactions EXP 6480464 schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of MAGIX mRNA] CTD PMID:31150632 Magix Rat 1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene multiple interactions ISO Magix (Mus musculus) 6480464 [2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ... CTD PMID:25510870 Magix Rat 1-naphthyl isothiocyanate decreases expression EXP 6480464 1-Naphthylisothiocyanate results in decreased expression of MAGIX mRNA CTD PMID:30723492 Magix Rat 2,2',4,4',5,5'-hexachlorobiphenyl multiple interactions ISO Magix (Mus musculus) 6480464 [2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ... CTD PMID:25510870 Magix Rat 2,2',4,4'-Tetrabromodiphenyl ether decreases expression EXP 6480464 2,2',4,4'-tetrabromodiphenyl ether results in decreased expression of MAGIX mRNA CTD PMID:27291303 Magix Rat 2,2',5,5'-tetrachlorobiphenyl multiple interactions ISO Magix (Mus musculus) 6480464 [2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ... CTD PMID:25510870 Magix Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression ISO MAGIX (Homo sapiens) 6480464 Tetrachlorodibenzodioxin results in increased expression of MAGIX mRNA CTD PMID:21296121 Magix Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of MAGIX mRNA CTD PMID:33387578 Magix Rat 2,4,4'-trichlorobiphenyl multiple interactions ISO Magix (Mus musculus) 6480464 [2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ... CTD PMID:25510870 Magix Rat 3-phenylprop-2-enal increases expression ISO MAGIX (Homo sapiens) 6480464 cinnamaldehyde results in increased expression of MAGIX mRNA CTD PMID:19524605 Magix Rat 4,4'-sulfonyldiphenol decreases expression ISO Magix (Mus musculus) 6480464 bisphenol S results in decreased expression of MAGIX mRNA CTD PMID:39298647 Magix Rat 4,4'-sulfonyldiphenol affects methylation ISO Magix (Mus musculus) 6480464 bisphenol S affects the methylation of MAGIX gene CTD PMID:31683443 Magix Rat 4,4'-sulfonyldiphenol decreases methylation ISO Magix (Mus musculus) 6480464 bisphenol S results in decreased methylation of MAGIX exon CTD PMID:33297965 Magix Rat 4-hydroxyphenyl retinamide increases expression ISO Magix (Mus musculus) 6480464 Fenretinide results in increased expression of MAGIX mRNA CTD PMID:28973697 Magix Rat 6-propyl-2-thiouracil decreases expression EXP 6480464 Propylthiouracil results in decreased expression of MAGIX mRNA CTD PMID:24780913|PMID:25825206|PMID:30047161 Magix Rat acrylamide increases expression ISO MAGIX (Homo sapiens) 6480464 Acrylamide results in increased expression of MAGIX mRNA CTD PMID:32763439 Magix Rat alpha-Zearalanol multiple interactions EXP 6480464 [Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of MAGIX mRNA CTD PMID:35163327 Magix Rat amitrole decreases expression EXP 6480464 Amitrole results in decreased expression of MAGIX mRNA CTD PMID:30047161 Magix Rat amphetamine increases expression EXP 6480464 Amphetamine results in increased expression of MAGIX mRNA CTD PMID:30779732 Magix Rat antirheumatic drug increases expression ISO MAGIX (Homo sapiens) 6480464 Antirheumatic Agents results in increased expression of MAGIX mRNA CTD PMID:24449571 Magix Rat arsane increases methylation ISO MAGIX (Homo sapiens) 6480464 Arsenic results in increased methylation of MAGIX promoter CTD PMID:21291286 Magix Rat arsenic atom increases methylation ISO MAGIX (Homo sapiens) 6480464 Arsenic results in increased methylation of MAGIX promoter CTD PMID:21291286 Magix Rat atrazine decreases expression EXP 6480464 Atrazine results in decreased expression of MAGIX mRNA CTD PMID:36841081 Magix Rat benzo[a]pyrene increases methylation ISO MAGIX (Homo sapiens) 6480464 Benzo(a)pyrene results in increased methylation of MAGIX 3' UTR CTD PMID:27901495 Magix Rat benzo[a]pyrene decreases expression ISO MAGIX (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased expression of MAGIX mRNA CTD PMID:32234424 Magix Rat benzo[a]pyrene affects methylation ISO MAGIX (Homo sapiens) 6480464 Benzo(a)pyrene affects the methylation of MAGIX promoter CTD PMID:27901495 Magix Rat benzo[a]pyrene decreases methylation ISO MAGIX (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased methylation of MAGIX 5' UTR CTD PMID:27901495 Magix Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of MAGIX mRNA; bisphenol A results in decreased expression more ... CTD PMID:25181051 Magix Rat cantharidin decreases expression ISO Magix (Mus musculus) 6480464 Cantharidin results in decreased expression of MAGIX mRNA CTD PMID:36907384 Magix Rat carbon nanotube decreases expression ISO Magix (Mus musculus) 6480464 Nanotubes, Carbon analog results in decreased expression of MAGIX mRNA; Nanotubes, Carbon results in decreased more ... CTD PMID:25554681|PMID:25620056 Magix Rat cobalt dichloride decreases expression EXP 6480464 cobaltous chloride results in decreased expression of MAGIX mRNA CTD PMID:24386269 Magix Rat Cuprizon increases expression EXP 6480464 Cuprizone results in increased expression of MAGIX mRNA CTD PMID:26577399 Magix Rat furan increases methylation EXP 6480464 furan results in increased methylation of MAGIX gene CTD PMID:22079235 Magix Rat gentamycin decreases expression EXP 6480464 Gentamicins results in decreased expression of MAGIX mRNA CTD PMID:33387578 Magix Rat GSK-J4 decreases expression ISO MAGIX (Homo sapiens) 6480464 GSK-J4 results in decreased expression of MAGIX mRNA CTD PMID:29301935 Magix Rat iron dichloride decreases expression ISO MAGIX (Homo sapiens) 6480464 ferrous chloride results in decreased expression of MAGIX mRNA CTD PMID:35984750 Magix Rat lead(0) increases expression ISO MAGIX (Homo sapiens) 6480464 Lead results in increased expression of MAGIX mRNA CTD PMID:19921347 Magix Rat methimazole decreases expression EXP 6480464 Methimazole results in decreased expression of MAGIX mRNA CTD PMID:30047161 Magix Rat methotrexate increases expression ISO MAGIX (Homo sapiens) 6480464 Methotrexate results in increased expression of MAGIX mRNA CTD PMID:24449571 Magix Rat methyl methanesulfonate increases expression ISO MAGIX (Homo sapiens) 6480464 Methyl Methanesulfonate results in increased expression of MAGIX mRNA CTD PMID:23649840 Magix Rat niclosamide increases expression ISO MAGIX (Homo sapiens) 6480464 Niclosamide results in increased expression of MAGIX mRNA CTD PMID:36318118 Magix Rat ozone decreases expression ISO Magix (Mus musculus) 6480464 Ozone results in decreased expression of MAGIX mRNA CTD PMID:17460151 Magix Rat paracetamol affects expression ISO Magix (Mus musculus) 6480464 Acetaminophen affects the expression of MAGIX mRNA CTD PMID:17562736 Magix Rat PCB138 multiple interactions ISO Magix (Mus musculus) 6480464 [2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ... CTD PMID:25510870 Magix Rat perfluorooctanoic acid multiple interactions EXP 6480464 [Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of MAGIX mRNA CTD PMID:35163327 Magix Rat phenobarbital multiple interactions ISO Magix (Mus musculus) 6480464 NR1I3 protein affects the reaction [Phenobarbital results in decreased expression of MAGIX mRNA] CTD PMID:19482888 Magix Rat phenobarbital affects expression ISO Magix (Mus musculus) 6480464 Phenobarbital affects the expression of MAGIX mRNA CTD PMID:23091169 Magix Rat phenobarbital decreases expression ISO Magix (Mus musculus) 6480464 Phenobarbital results in decreased expression of MAGIX mRNA CTD PMID:19482888 Magix Rat pioglitazone multiple interactions ISO Magix (Mus musculus) 6480464 [N-nitroso-tris-chloroethylurea co-treated with pioglitazone] results in decreased expression of MAGIX mRNA CTD PMID:27935865 Magix Rat pregnenolone 16alpha-carbonitrile decreases expression EXP 6480464 Pregnenolone Carbonitrile results in decreased expression of MAGIX mRNA CTD PMID:30047161 Magix Rat sulfadimethoxine decreases expression EXP 6480464 Sulfadimethoxine results in decreased expression of MAGIX mRNA CTD PMID:30047161 Magix Rat sunitinib increases expression ISO MAGIX (Homo sapiens) 6480464 Sunitinib results in increased expression of MAGIX mRNA CTD PMID:31533062 Magix Rat tetrachloromethane multiple interactions EXP 6480464 schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of MAGIX mRNA] CTD PMID:31150632 Magix Rat tetrachloromethane decreases expression EXP 6480464 Carbon Tetrachloride results in decreased expression of MAGIX mRNA CTD PMID:31150632 Magix Rat thioacetamide decreases expression EXP 6480464 Thioacetamide results in decreased expression of MAGIX mRNA CTD PMID:23411599|PMID:34492290
(+)-schisandrin B (EXP) 1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO) 1-naphthyl isothiocyanate (EXP) 2,2',4,4',5,5'-hexachlorobiphenyl (ISO) 2,2',4,4'-Tetrabromodiphenyl ether (EXP) 2,2',5,5'-tetrachlorobiphenyl (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,4,4'-trichlorobiphenyl (ISO) 3-phenylprop-2-enal (ISO) 4,4'-sulfonyldiphenol (ISO) 4-hydroxyphenyl retinamide (ISO) 6-propyl-2-thiouracil (EXP) acrylamide (ISO) alpha-Zearalanol (EXP) amitrole (EXP) amphetamine (EXP)
References
Genomics
Comparative Map Data
Magix Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 X 17,496,092 - 17,504,370 (+) NCBI GRCr8 GRCr8 GRCr8 GRCr8 Ensembl X 17,496,225 - 17,504,369 (+) Ensembl GRCr8 mRatBN7.2 X 14,824,114 - 14,832,466 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl X 14,824,188 - 14,831,045 (+) Ensembl mRatBN7.2 UTH_Rnor_SHR_Utx X 19,638,353 - 19,645,187 (+) NCBI UTH_Rnor_SHR_Utx UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 X 20,437,944 - 20,444,782 (-) NCBI UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 X 16,703,089 - 16,709,931 (-) NCBI UTH_Rnor_WKY_Bbb_1.0 UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 X 15,669,191 - 15,676,051 (+) NCBI Rnor_6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl X 15,669,191 - 15,676,050 (+) Ensembl rn6 Rnor6.0 Rnor_5.0 X 16,460,417 - 16,467,277 (+) NCBI Rnor_5.0 Rnor_5.0 rn5 RGSC_v3.4 X 26,865,047 - 26,871,907 (+) NCBI RGSC_v3.4 RGSC_v3.4 rn4 Celera X 14,907,513 - 14,914,379 (+) NCBI Celera Cytogenetic Map X q12 NCBI
MAGIX Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 X 49,162,665 - 49,168,774 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl X 49,162,564 - 49,168,774 (+) Ensembl hg38 GRCh38 GRCh37 X 49,019,099 - 49,025,111 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 X 48,906,125 - 48,910,780 (+) NCBI Build 36 Build 36 hg18 NCBI36 Celera X 52,640,533 - 52,645,188 (-) NCBI Celera Cytogenetic Map X p11.23 NCBI HuRef X 46,676,683 - 46,681,194 (+) NCBI HuRef CHM1_1 X 49,051,538 - 49,056,192 (+) NCBI CHM1_1 T2T-CHM13v2.0 X 48,574,403 - 48,580,510 (+) NCBI T2T-CHM13v2.0
Magix Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 X 7,539,405 - 7,547,490 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl X 7,539,403 - 7,547,490 (-) Ensembl GRCm39 Ensembl GRCm39 GRCm38 X 7,673,166 - 7,681,251 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl X 7,673,164 - 7,681,251 (-) Ensembl mm10 GRCm38 MGSCv37 X 7,250,292 - 7,258,215 (-) NCBI MGSCv37 MGSCv37 mm9 NCBIm37 MGSCv36 X 6,831,586 - 6,838,006 (-) NCBI MGSCv36 mm8 Celera X 3,789,488 - 3,797,663 (+) NCBI Celera Cytogenetic Map X A1.1 NCBI cM Map X 3.46 NCBI
MAGIX Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 X 50,655,239 - 50,660,712 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 X 50,658,634 - 50,664,091 (+) NCBI NHGRI_mPanPan1 PanPan1.1 Ensembl X 49,315,253 - 49,318,703 (+) Ensembl panPan2 panpan1.1
LOC612555 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 X 42,267,054 - 42,269,303 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl X 42,266,715 - 42,269,300 (+) Ensembl canFam3 CanFam3.1 Dog10K_Boxer_Tasha X 16,644,645 - 16,648,491 (+) NCBI Dog10K_Boxer_Tasha Dog10K_Boxer_Tasha
Magix Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 X 34,799,077 - 34,805,365 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936721 1,039,481 - 1,044,030 (+) Ensembl SpeTri2.0 Ensembl SpeTri2.0 NW_004936721 1,039,098 - 1,044,286 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
MAGIX Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl X 43,207,062 - 43,211,635 (+) Ensembl susScr11 Sscrofa11.1 Sscrofa11.1 X 43,206,680 - 43,212,889 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 X 48,054,641 - 48,059,583 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
MAGIX Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 X 46,260,076 - 46,264,187 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl X 46,260,137 - 46,263,687 (+) Ensembl ChlSab1.1 Ensembl chlSab2 Vervet-AGM Vero_WHO_p1.0 NW_023666076 11,824,441 - 11,827,453 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Magix
Magix
miRNA Target Status (No longer updated)
Predicted Target Of
Count of predictions: 44 Count of miRNA genes: 38 Interacting mature miRNAs: 41 Transcripts: ENSRNOT00000013553 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction 
