Magix (MAGI family member, X-linked)

Gene: Magix (MAGI family member, X-linked) Rattus norvegicus

Analyze

Symbol:

Magix

Name:

MAGI family member, X-linked

RGD ID:

1549729

Description:

Orthologous to human MAGIX (MAGI family member, X-linked); INTERACTS WITH (+)-schisandrin B; 1-naphthyl isothiocyanate; 2,2',4,4'-Tetrabromodiphenyl ether.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC317379; PDZ domain-containing protein MAGIX; similar to Pdz-containing protein

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	17,496,092 - 17,504,370 (+)	NCBI		GRCr8
mRatBN7.2	X	14,824,114 - 14,832,466 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	14,824,188 - 14,831,045 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	19,638,353 - 19,645,187 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	20,437,944 - 20,444,782 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	16,703,089 - 16,709,931 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	15,669,191 - 15,676,051 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	15,669,191 - 15,676,050 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	16,460,417 - 16,467,277 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	26,865,047 - 26,871,907 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	14,907,513 - 14,914,379 (+)	NCBI		Celera
Cytogenetic Map	X	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

congenital disorder of glycosylation type IIm (ISO)

genetic disease (ISO)

immune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome (ISO)

neurodegeneration with brain iron accumulation 5 (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

X-linked epilepsy with variable learning disabilities and behavior disorders (ISO)

X-linked severe congenital neutropenia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

1-naphthyl isothiocyanate (EXP)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3-phenylprop-2-enal (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (ISO)

amitrole (EXP)

amphetamine (EXP)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

cantharidin (ISO)

carbon nanotube (ISO)

cobalt dichloride (EXP)

Cuprizon (EXP)

furan (EXP)

gentamycin (EXP)

iron dichloride (ISO)

lead(0) (ISO)

methimazole (EXP)

methotrexate (ISO)

methyl methanesulfonate (ISO)

niclosamide (ISO)

ozone (ISO)

paracetamol (ISO)

PCB138 (ISO)

phenobarbital (ISO)

pioglitazone (ISO)

pregnenolone 16alpha-carbonitrile (EXP)

sulfadimethoxine (EXP)

sunitinib (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

References

References - curated

#	Reference Title	Reference Citation
1.	GOA pipeline	RGD automated data pipeline
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
3.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Genomics

Comparative Map Data

Magix
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	17,496,092 - 17,504,370 (+)	NCBI		GRCr8
mRatBN7.2	X	14,824,114 - 14,832,466 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	14,824,188 - 14,831,045 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	19,638,353 - 19,645,187 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	20,437,944 - 20,444,782 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	16,703,089 - 16,709,931 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	15,669,191 - 15,676,051 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	15,669,191 - 15,676,050 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	16,460,417 - 16,467,277 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	26,865,047 - 26,871,907 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	14,907,513 - 14,914,379 (+)	NCBI		Celera
Cytogenetic Map	X	q12	NCBI

MAGIX
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	49,162,665 - 49,168,774 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	49,162,564 - 49,168,774 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	49,019,099 - 49,025,111 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	48,906,125 - 48,910,780 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	X	52,640,533 - 52,645,188 (-)	NCBI		Celera
Cytogenetic Map	X	p11.23	NCBI
HuRef	X	46,676,683 - 46,681,194 (+)	NCBI		HuRef
CHM1_1	X	49,051,538 - 49,056,192 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	48,574,403 - 48,580,510 (+)	NCBI		T2T-CHM13v2.0

Magix
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	7,539,405 - 7,547,490 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	7,539,403 - 7,547,490 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	7,673,166 - 7,681,251 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	7,673,164 - 7,681,251 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	7,250,292 - 7,258,215 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	6,831,586 - 6,838,006 (-)	NCBI		MGSCv36	mm8
Celera	X	3,789,488 - 3,797,663 (+)	NCBI		Celera
Cytogenetic Map	X	A1.1	NCBI
cM Map	X	3.46	NCBI

MAGIX
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	50,655,239 - 50,660,712 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	50,658,634 - 50,664,091 (+)	NCBI		NHGRI_mPanPan1
PanPan1.1 Ensembl	X	49,315,253 - 49,318,703 (+)	Ensembl	panpan1.1		panPan2

LOC612555
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	42,267,054 - 42,269,303 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	42,266,715 - 42,269,300 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	16,644,645 - 16,648,491 (+)	NCBI		Dog10K_Boxer_Tasha

Magix
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	34,799,077 - 34,805,365 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936721	1,039,481 - 1,044,030 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936721	1,039,098 - 1,044,286 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MAGIX
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	43,207,062 - 43,211,635 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	43,206,680 - 43,212,889 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	48,054,641 - 48,059,583 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MAGIX
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	46,260,076 - 46,264,187 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	46,260,137 - 46,263,687 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666076	11,824,441 - 11,827,453 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Magix
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624893	906,015 - 909,610 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624893	906,203 - 909,555 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Magix
22 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	44
Count of miRNA genes:	38
Interacting mature miRNAs:	41
Transcripts:	ENSRNOT00000013553
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
731181	Uae27	Urinary albumin excretion QTL 27	2.7	0.0059	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	X	1	43491017	Rat
634325	Bw13	Body weight QTL 13	0		body mass (VT:0001259)	body weight (CMO:0000012)	X	1447972	20991088	Rat
70165	Bp64	Blood pressure QTL 64	5.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	X	1448129	31706553	Rat
631204	Gluco15	Glucose level QTL 15		0.001	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	X	1623715	22646544	Rat
1298071	Edpm12	Estrogen-dependent pituitary mass QTL 12	3.2		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	X	2927898	47927898	Rat
10755455	Coatc13	Coat color QTL 13		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	4406000	49406000	Rat
631666	Iddm5	Insulin dependent diabetes mellitus QTL 5			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	X	4494549	49494549	Rat

Markers in Region

RH131637

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	14,830,806 - 14,831,021 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	15,675,812 - 15,676,026	NCBI	Rnor6.0
Rnor_5.0	X	16,467,038 - 16,467,252	UniSTS	Rnor5.0
RGSC_v3.4	X	26,871,668 - 26,871,882	UniSTS	RGSC3.4
Celera	X	14,914,140 - 14,914,354	UniSTS
RH 3.4 Map	X	146.3	UniSTS
Cytogenetic Map	X	q13	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium		2					7	10		2			7
Low	3	21	43	27	19	27	1	1	16	27	13	11	1
Below cutoff		12	14	14		14			42	6	22

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001014109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099789	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC130624	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC078960	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000013553 ⟹ ENSRNOP00000013553

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	14,824,188 - 14,831,045 (+)	Ensembl
Rnor_6.0 Ensembl	X	15,669,191 - 15,676,050 (+)	Ensembl

RefSeq Acc Id:

NM_001014109 ⟹ NP_001014131

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	17,496,092 - 17,502,950 (+)	NCBI
mRatBN7.2	X	14,824,188 - 14,831,046 (+)	NCBI
Rnor_6.0	X	15,669,191 - 15,676,051 (+)	NCBI
Rnor_5.0	X	16,460,417 - 16,467,277 (+)	NCBI
RGSC_v3.4	X	26,865,047 - 26,871,907 (+)	RGD
Celera	X	14,907,513 - 14,914,379 (+)	RGD

Sequence:

show sequence

CTTGCCTGCAGCCAGGTAGGTCACCTCCTGGTCTGGGCGTCAGGCCTGGGACTAGCCAGACAAC
AGCCGAGTCCAGGCCTGGGCTAGGAGCCAGGTGAGCGTGCCCCTGCGCTAAAAACTAGTCATCG
AGCTGCTCTGAGTCCACCAGGCTCACCACAGGTCATGGACTCTCACGCTGGGAACACCGCAGAC
CCTAGAGGGAGCAGAAGAGGAGTTGGTTTACAGGGGTCGGGGAGCCCCCGAGCTCGTCAGCTCC
TCGAGCGGCTGGATGCGCGCCCCCTGGCGGCACGAGCCGCAGCGGACTTGTCAGCGCTAGTAAG
AAAGGCTGGAGCCACATTGCGCCTGCGCCACAAGGAGGCTATTAGTGGTCTGGATTCTGCAGAT
ATAGAAGTTGCAGACAGCCGTTTGCCTCATGCCACTCTTGTGGAACATCGACCCCAGCATCAAA
GATCTGACACGCAGGGTCCACGTATGGAGCCACTTCCAGTAATCCAGAATAAGGCAAGCTATGC
TTCGAGACTACCCCAAGCCACTGGCCGATTTTCTGTGGAGCTGGTCAGAGGTCCTGCAGGCTTT
GGTCTCACTTTAAGTGGAGGCCGTAATGTATCCGGGAATGTGCCGTTGGCTGTATGTGGACTGC
TGAAGGATGGGCCAGCACAGCGATGTGGTCATTTGCAGGCTGGTGATCTTGTGCTCTATATCAA
TGGACAGTCAACACGGGGCCTCACTCATGCCCAGGCAGTGGAATGGATTCGCACTGGAGGCCCC
CGCCTTTGCCTGGTACTCCAGCGGCCTCAAGAGATGAATGGCAGTAGGAGCAAGGAGGTTGGAG
GAGGACATCAGAAGACAGATCGCATCCCAGATCCTAGGGGAGGCAGGATGATGGAGTCTCGCGG
CACCATTTCCCCAGTTCACCACCGGCCCAAGACCCGGACTGGTCCGGGACCTAGTCCAGAGTCA
GTGGCTACTGGCCACGTGGTTCGCGCAGCAGAGCACCCCGCAGAAGACCTGGAAGACCGTATCC
CTGGTTCCCCTGGGCCCTGGCTGGTGCCGAGCGAGGACAGGCTCTCACGGGCTTTAGGGATTCG
GGGTGGTGGCGTGCAGCTCGCTCAGGAGATGGCAGCCGGAAGGCGGAGGCATTGAGCACCAACA
GACAGCTCAGTGCTCACTAGGTGAAGTCCCACAAGGTTCTAATAAGCCGGACCGCCAGGCTCTA
AGCTTTTCCCTTACAGATTTAACATGGTTTAGTACCTTCCCACTGCTCACTGCACAGTGGACTG
GTCCCCACCCCTTCAAGACGCCAGTAGTATGGCCCTCCCAGAGCCCAGAGCGCTCGCACCCCAC
CACCCCCACGTCCGCGTGCGCACAGCTTCTCCTAGTTCCCTCTCAGGCTGGGAGGCAATAAAAT
AGCTGGATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039099789 ⟹ XP_038955717

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	17,498,123 - 17,504,370 (+)	NCBI
mRatBN7.2	X	14,825,986 - 14,832,466 (+)	NCBI

RefSeq Acc Id:

XM_039099790 ⟹ XP_038955718

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	17,496,093 - 17,504,370 (+)	NCBI
mRatBN7.2	X	14,824,114 - 14,832,466 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001014131	(Get FASTA)	NCBI Sequence Viewer
	XP_038955717	(Get FASTA)	NCBI Sequence Viewer
	XP_038955718	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH78960	(Get FASTA)	NCBI Sequence Viewer
	EDL83837	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000013553
	ENSRNOP00000013553.3
	ENSRNOP00055039624
	ENSRNOP00060043274
	ENSRNOP00065013823
GenBank Protein	Q6AYQ0	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001014131 ⟸ NM_001014109

- UniProtKB:

Q6AYQ0 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MDSHAGNTADPRGSRRGVGLQGSGSPRARQLLERLDARPLAARAAADLSALVRKAGATLRLRHK
EAISGLDSADIEVADSRLPHATLVEHRPQHQRSDTQGPRMEPLPVIQNKASYASRLPQATGRFS
VELVRGPAGFGLTLSGGRNVSGNVPLAVCGLLKDGPAQRCGHLQAGDLVLYINGQSTRGLTHAQ
AVEWIRTGGPRLCLVLQRPQEMNGSRSKEVGGGHQKTDRIPDPRGGRMMESRGTISPVHHRPKT
RTGPGPSPESVATGHVVRAAEHPAEDLEDRIPGSPGPWLVPSEDRLSRALGIRGGGVQLAQEMA
AGRRRH

hide sequence

RefSeq Acc Id:

ENSRNOP00000013553 ⟸ ENSRNOT00000013553

RefSeq Acc Id:	XP_038955718 ⟸ XM_039099790
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038955717 ⟸ XM_039099789
- Peptide Label:	isoform X1

Protein Domains

PDZ

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6AYQ0-F1-model_v2	AlphaFold	Q6AYQ0	1-326	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1549729	AgrOrtholog
BioCyc Gene	G2FUF-2912	BioCyc
Ensembl Genes	ENSRNOG00000010092	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOG00055027811	UniProtKB/Swiss-Prot
	ENSRNOG00060029956	UniProtKB/Swiss-Prot
	ENSRNOG00065011203	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000013553	ENTREZGENE
	ENSRNOT00000013553.5	UniProtKB/Swiss-Prot
	ENSRNOT00055048159	UniProtKB/Swiss-Prot
	ENSRNOT00060052029	UniProtKB/Swiss-Prot
	ENSRNOT00065018139	UniProtKB/Swiss-Prot
Gene3D-CATH	2.30.42.10	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7110859	IMAGE-MGC_LOAD
InterPro	MAGIX	UniProtKB/Swiss-Prot
	PDZ	UniProtKB/Swiss-Prot
	PDZ_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:317379	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:93827	IMAGE-MGC_LOAD
NCBI Gene	317379	ENTREZGENE
PANTHER	PDZ DOMAIN-CONTAINING PROTEIN MAGIX	UniProtKB/Swiss-Prot
	PTHR47646	UniProtKB/Swiss-Prot
Pfam	PDZ	UniProtKB/Swiss-Prot
PhenoGen	Magix	PhenoGen
PROSITE	PDZ	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000010092	RatGTEx
	ENSRNOG00055027811	RatGTEx
	ENSRNOG00060029956	RatGTEx
	ENSRNOG00065011203	RatGTEx
SMART	PDZ	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF50156	UniProtKB/Swiss-Prot
UniProt	MAGIX_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-05	Magix	MAGI family member, X-linked	LOC317379	similar to Pdz-containing protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-09-15	LOC317379	similar to Pdz-containing protein			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar