Advanced Search (OLGA)

Gene: Mapda (N6-Methyl-AMP deaminase) Rattus norvegicus

Analyze

Symbol:

Mapda (Ensembl: Adal)

Name:

N6-Methyl-AMP deaminase (Ensembl:adenosine deaminase-like)

RGD ID:

1359517

Description:

Predicted to enable nucleic acid binding activity; structural molecule activity; and zinc ion binding activity. Predicted to be involved in viral process. Predicted to act upstream of or within response to alcohol. Orthologous to several human genes including MAPDA (N6-Methyl-AMP deaminase); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 17beta-estradiol 3-benzoate.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Adal; adenosine deaminase-like; hypothetical protein LOC311352; LOC311352; MGC109297; similar to Adenosine deaminase CG11994-PA; uncharacterized protein LOC311352

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MAPDA (N6-Methyl-AMP deaminase)	HGNC	Ensembl, NCBI, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Adal (adenosine deaminase-like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Mapda (N6-Methyl-AMP deaminase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MAPDA (N6-Methyl-AMP deaminase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ADAL (adenosine deaminase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Mapda (N6-Methyl-AMP deaminase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ADAL (adenosine deaminase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MAPDA (N6-Methyl-AMP deaminase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Mapda (N6-Methyl-AMP deaminase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Mapda (N6-Methyl-AMP deaminase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ERVK-5 (endogenous retrovirus group K member 5)	Alliance	DIOPT (InParanoid\|OMA\|OrthoInspector)
Mus musculus (house mouse):	Adal (adenosine deaminase-like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Adal (adenosine deaminase-like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Homo sapiens (human):	MAPDA (N6-Methyl-AMP deaminase)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	MAPDA (N6-Methyl-AMP deaminase)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Danio rerio (zebrafish):	adal (adenosine deaminase-like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	adal (adenosine deaminase-like)	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Ada	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Ada	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Caenorhabditis elegans (roundworm):	C44B7.12	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	C44B7.12	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	adal	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	adal	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	128,555,604 - 128,583,809 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	128,574,885 - 128,587,173 (+)	Ensembl				GRCr8
GRCr8 Ensembl	3	128,555,604 - 128,575,708 (+)	Ensembl				GRCr8
mRatBN7.2	3	108,101,857 - 108,119,557 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	108,101,857 - 108,118,516 (+)	Ensembl				mRatBN7.2
mRatBN7.2 Ensembl	3	108,098,346 - 108,130,565 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	111,776,614 - 111,794,296 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	120,372,197 - 120,389,879 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	118,032,592 - 118,050,274 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	3	126,421,400 - 126,439,082 (+)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	3	133,337,910 - 133,355,592 (+)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	3	125,217,732 - 125,235,414 (+)	NCBI		Lyon_Hypertensive
F344_StmMcwi	3	106,522,269 - 106,539,951 (+)	NCBI		F344_StmMcwi
Rnor_6.0	3	113,091,696 - 113,109,841 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	113,102,090 - 113,108,654 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	119,641,987 - 119,648,582 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	107,941,888 - 107,948,473 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	107,016,464 - 107,023,057 (+)	NCBI		Celera
RGSC_v3.1	3	107,838,315 - 107,844,900 (+)	NCBI
Cytogenetic Map	3	q35	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

17beta-estradiol 3-benzoate (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

4,4'-diaminodiphenylmethane (ISO)

all-trans-retinoic acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

CGP 52608 (ISO)

chlordecone (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

cyclosporin A (ISO)

cypermethrin (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

endosulfan (EXP)

folic acid (ISO)

gentamycin (EXP)

maneb (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

paracetamol (EXP,ISO)

paraquat (ISO)

quercetin (ISO)

resveratrol (ISO)

sunitinib (ISO)

temozolomide (ISO)

testosterone (EXP)

tetrachloromethane (EXP)

thioacetamide (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

nucleotide metabolic process (IEA)

toxic metabolite repair (IEA,ISO)

viral process (IEA)

Molecular Function

deaminase activity (IEA)

hydrolase activity (IEA)

metal ion binding (IEA)

N6-methyl-AMP deaminase activity (IEA,ISO)

nucleic acid binding (IEA)

protein binding (ISO)

structural molecule activity (IEA)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:21755941

Genomics

Comparative Map Data

Mapda
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	128,555,604 - 128,583,809 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	128,574,885 - 128,587,173 (+)	Ensembl				GRCr8
GRCr8 Ensembl	3	128,555,604 - 128,575,708 (+)	Ensembl				GRCr8
mRatBN7.2	3	108,101,857 - 108,119,557 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	108,101,857 - 108,118,516 (+)	Ensembl				mRatBN7.2
mRatBN7.2 Ensembl	3	108,098,346 - 108,130,565 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	111,776,614 - 111,794,296 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	120,372,197 - 120,389,879 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	118,032,592 - 118,050,274 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	3	126,421,400 - 126,439,082 (+)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	3	133,337,910 - 133,355,592 (+)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	3	125,217,732 - 125,235,414 (+)	NCBI		Lyon_Hypertensive
F344_StmMcwi	3	106,522,269 - 106,539,951 (+)	NCBI		F344_StmMcwi
Rnor_6.0	3	113,091,696 - 113,109,841 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	113,102,090 - 113,108,654 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	119,641,987 - 119,648,582 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	107,941,888 - 107,948,473 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	107,016,464 - 107,023,057 (+)	NCBI		Celera
RGSC_v3.1	3	107,838,315 - 107,844,900 (+)	NCBI
Cytogenetic Map	3	q35	NCBI

MAPDA
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	43,330,351 - 43,354,569 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	43,330,307 - 43,355,418 (+)	Ensembl			hg38	GRCh38
GRCh37	15	43,622,549 - 43,646,767 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	41,410,217 - 41,428,902 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	15	20,393,719 - 20,416,958 (+)	NCBI		Celera
Cytogenetic Map	15	q15.3	NCBI
HuRef	15	20,471,614 - 20,494,863 (+)	NCBI		HuRef
CHM1_1	15	43,741,538 - 43,764,761 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	41,137,658 - 41,161,894 (+)	NCBI		T2T-CHM13v2.0

Adal
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	120,970,525 - 120,989,921 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	120,970,909 - 120,987,161 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	121,140,044 - 121,159,440 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	121,140,428 - 121,156,680 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	120,967,877 - 120,982,414 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	120,831,772 - 120,848,128 (+)	NCBI		MGSCv36	mm8
Celera	2	122,294,038 - 122,308,746 (+)	NCBI		Celera
Cytogenetic Map	2	E5	NCBI
cM Map	2	60.37	NCBI

Mapda
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	9,898,339 - 9,913,427 (+)	Ensembl
ChiLan1.0	NW_004955416	9,892,422 - 9,913,877 (+)	NCBI	ChiLan1.0	ChiLan1.0

MAPDA
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	32,581,778 - 32,606,270 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	36,743,736 - 36,767,399 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	22,291,939 - 22,315,830 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	40,451,239 - 40,468,821 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	40,451,403 - 40,468,241 (+)	Ensembl			panPan2	panpan1.1

ADAL
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	10,191,019 - 10,214,089 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	10,194,606 - 10,216,875 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	10,249,786 - 10,273,005 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	10,326,897 - 10,350,221 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	10,326,933 - 10,352,820 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	10,243,608 - 10,266,804 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	10,364,681 - 10,387,895 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	10,484,553 - 10,507,839 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Mapda
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	88,653,726 - 88,693,793 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	6,501,891 - 6,524,141 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	6,501,887 - 6,541,796 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ADAL
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	128,095,940 - 128,120,765 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	128,089,422 - 128,125,691 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	142,954,878 - 142,982,145 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MAPDA
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	39,648,164 - 39,669,734 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666048	101,343,632 - 101,375,827 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mapda
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624804	10,445,758 - 10,462,648 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624804	10,438,845 - 10,463,086 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Mapda
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	99,285,929 - 99,303,308 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Mapda
211 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	111
Count of miRNA genes:	92
Interacting mature miRNAs:	99
Transcripts:	ENSRNOT00000016529, ENSRNOT00000072305
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2301414	Kidm37	Kidney mass QTL 37		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	96509147	141509147	Rat
1582238	Bw68	Body weight QTL 68	3.2	0.0064	body mass (VT:0001259)	body weight (CMO:0000012)	3	73592512	136118980	Rat
1582239	Epfw1	Epididymal fat weight QTL 1	4.5	0.0006	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	3	73592512	136118980	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	67641776	167835660	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	58601291	153936591	Rat
1582216	Bw65	Body weight QTL 65	6.3		body mass (VT:0001259)	body weight (CMO:0000012)	3	122654702	136118980	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	49872657	138829559	Rat
1582218	Bw74	Body weight QTL 74	3.9	0.0021	body mass (VT:0001259)	body weight (CMO:0000012)	3	73592512	136118980	Rat
1582219	Bw63	Body weight QTL 63	3.8	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	3	116582412	136118980	Rat
1582221	Kidm30	Kidney mass QTL 30	3.5	0.0008	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	3	85062224	136118980	Rat
1582210	Bw71	Body weight QTL 71	3.3	0.0012	body mass (VT:0001259)	body weight (CMO:0000012)	3	85062224	136118980	Rat
7387306	Bw124	Body weight QTL 124	3.2	0.0003	body mass (VT:0001259)	body weight (CMO:0000012)	3	104545086	149545086	Rat
1300111	Rf12	Renal function QTL 12	3.78		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	81425008	141509147	Rat
724523	Tsu1	Thymus enlargement suppressive QTL 1	3.84		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	3	70845569	136091483	Rat
1600376	Arunc5	Aerobic running capacity QTL 5		0.21	exercise endurance trait (VT:0002332)	longest distance run on treadmill (CMO:0001406)	3	93829559	138829559	Rat
8694437	Bw167	Body weight QTL 167	22.46	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	3	112250810	157250810	Rat
2302273	Gluco35	Glucose level QTL 35	5.3	0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	101255536	134750886	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
2292613	Ept16	Estrogen-induced pituitary tumorigenesis QTL 16	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	67641995	130815812	Rat
1581503	Cm58	Cardiac mass QTL 58	2.7	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	96509147	141509147	Rat
1354611	Despr2	Despair related QTL 2	3.03	0.0028	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	3	117537367	162537367	Rat
2303620	Vencon4	Ventilatory control QTL 4	3.9		respiration trait (VT:0001943)	tidal volume (CMO:0000222)	3	125116475	170116475	Rat
631649	Bp123	Blood pressure QTL 123	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	110225882	155225882	Rat
12879848	Bw181	Body weght QTL 181		0.015	body mass (VT:0001259)	body weight (CMO:0000012)	3	90755164	141509147	Rat
5686842	Rf59	Renal function QTL 59			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	3	122395989	167395989	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	1	141509147	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	98651826	167012663	Rat
631665	Bw8	Body weight QTL 8	5.5		body mass (VT:0001259)	body weight (CMO:0000012)	3	125814931	139636791	Rat
1331758	Bp207	Blood pressure QTL 207	2.848		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	110634702	155634702	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	5675975	141509147	Rat
1358186	Ept2	Estrogen-induced pituitary tumorigenesis QTL 2	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	67641995	130815812	Rat
724532	Cm17	Cardiac mass QTL 17	2		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	3	116188400	161188400	Rat

Markers in Region

RH143801

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	108,114,729 - 108,115,025 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	113,104,416 - 113,104,711	NCBI	Rnor6.0
Rnor_5.0	3	119,644,313 - 119,644,608	UniSTS	Rnor5.0
RGSC_v3.4	3	107,944,214 - 107,944,509	UniSTS	RGSC3.4
Celera	3	107,018,790 - 107,019,085	UniSTS
RH 3.4 Map	3	944.5	UniSTS
Cytogenetic Map	3	q35	UniSTS

BE118288

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	108,117,637 - 108,117,817 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	113,107,324 - 113,107,503	NCBI	Rnor6.0
Rnor_5.0	3	119,647,221 - 119,647,400	UniSTS	Rnor5.0
RGSC_v3.4	3	107,947,122 - 107,947,301	UniSTS	RGSC3.4
RH 3.4 Map	3	943.1	UniSTS
Cytogenetic Map	3	q35	UniSTS

RH131267

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	108,119,084 - 108,119,264 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	113,108,771 - 113,108,950	NCBI	Rnor6.0
Rnor_5.0	3	119,648,678 - 119,648,857	UniSTS	Rnor5.0
RGSC_v3.4	3	107,948,569 - 107,948,748	UniSTS	RGSC3.4
Celera	3	107,023,153 - 107,023,332	UniSTS
RH 3.4 Map	3	939.1	UniSTS
Cytogenetic Map	3	q35	UniSTS

BG373446

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	108,119,178 - 108,119,419 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	113,108,865 - 113,109,105	NCBI	Rnor6.0
Rnor_5.0	3	119,648,772 - 119,649,012	UniSTS	Rnor5.0
RGSC_v3.4	3	107,948,663 - 107,948,903	UniSTS	RGSC3.4
Celera	3	107,023,247 - 107,023,487	UniSTS
RH 3.4 Map	3	939.9	UniSTS
Cytogenetic Map	3	q35	UniSTS

BF390186

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	108,108,272 - 108,108,452 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	113,097,959 - 113,098,138	NCBI	Rnor6.0
Rnor_5.0	3	119,637,856 - 119,638,035	UniSTS	Rnor5.0
RGSC_v3.4	3	107,937,757 - 107,937,936	UniSTS	RGSC3.4
Celera	3	107,012,341 - 107,012,520	UniSTS
RH 3.4 Map	3	946.4	UniSTS
Cytogenetic Map	3	q35	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001014047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762167	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591734	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591736	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104953	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283714	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283715	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283717	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010064618	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010064619	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC094543	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC089959	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000016529 ⟹ ENSRNOP00000016529

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	128,555,604 - 128,573,304 (+)	Ensembl
mRatBN7.2 Ensembl	3	108,101,857 - 108,118,516 (+)	Ensembl
Rnor_6.0 Ensembl	3	113,102,090 - 113,108,654 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000105568 ⟹ ENSRNOP00000082379

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	128,574,885 - 128,587,173 (+)	Ensembl
mRatBN7.2 Ensembl	3	108,098,346 - 108,127,532 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119906 ⟹ ENSRNOP00000094885

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	128,574,885 - 128,584,202 (+)	Ensembl
mRatBN7.2 Ensembl	3	108,098,346 - 108,130,565 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000137433 ⟹ ENSRNOP00000100104

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	128,576,002 - 128,587,173 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000137477 ⟹ ENSRNOP00000105230

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	128,574,885 - 128,578,737 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000151614 ⟹ ENSRNOP00000105046

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	128,555,604 - 128,575,708 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000159363 ⟹ ENSRNOP00000111630

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	128,555,604 - 128,573,304 (+)	Ensembl

RefSeq Acc Id:

NM_001014047 ⟹ NP_001014069

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	128,555,604 - 128,573,304 (+)	NCBI
mRatBN7.2	3	108,101,857 - 108,119,557 (+)	NCBI
Dahl_SR_JrHsd	3	126,421,400 - 126,439,082 (+)	NCBI
Lyon_Normotensive	3	133,337,910 - 133,355,592 (+)	NCBI
Lyon_Hypertensive	3	125,217,732 - 125,235,414 (+)	NCBI
F344_StmMcwi	3	106,522,269 - 106,539,951 (+)	NCBI
Rnor_6.0	3	113,102,090 - 113,108,675 (+)	NCBI
Rnor_5.0	3	119,641,987 - 119,648,582 (+)	NCBI
RGSC_v3.4	3	107,941,888 - 107,948,473 (+)	RGD
Celera	3	107,016,464 - 107,023,057 (+)	RGD

Sequence:

show sequence

CACATTGTAGCCAAGGATAATCTTTCTGCCTCCGCCTTCCAGATACTTTGATTATAGGCACACA
TGCACCTACTCCGGCTTCATCTGTGAATTTCTTGATCATAATATCTTCCTGCCAAGTTCGTATC
AACTGTATTTTTCTTATATTAAAGGTATTTGATGGCAATTGACAGAAAAGGTGGCCCGACAGTA
GCCAAGGAGACTGTCAAACTTGCTAAAGAGTTCTTCCTCTCTGCTGAGGATACAGTTCTTGGCC
TTGACCTCAGTGGAGATCCAACTATCGGACAAGCAAAAGACTTCTTGGAGCCTCTTTTAGAAGC
TAAAAAAGCAGGCCTGAAGTTGGCGTTGCATCTTGCAGAGATTCCAAATAAGGAAAAAGAAACA
CAGATGTTGCTGGATCTGCTTCCTGACAGAATTGGGCATGGAACATTCCTCAACACCCCCGAGG
CAGGGTCAGTGGATCAGGTGAACTTCGTGAGGCAACACCGGATACCTCTTGAACTTTGTTTGAC
CTCAAACATCAAAAGCCAGACAGTTCCTTCTTATGACCAGCATCACTTTGGATTCTGGTATAGC
GTTGCTCATCCTTCTGTGATCTGTACCGATGATAAAGGTGTTTTTGCAACAAGCCTTTCTCAAG
AATATCAACTGGCAGCAGAAACATTTAATCTGACCCCATCGCAGGTGTGGGATCTGTCTTATGA
ATCCATCAACTACATCTTCGCTTCTAACAACACCAGATCTGAACTGAGAAAAAGGTGGACTCAC
CTGAAACAGAAAGTGTTAGGCTGTAACGAGGTGAACTACTTTTGATTATACGTCGTAACCAAGG
TCTTCCTGCCCTGTGTACCCCACTCAGTTACTGCCCACTTGAAATTACTTCAAGTTCAGTAGCC
AAGTATATATGGGTCTAACTCCAGCACCTTCATATGGTAAGTGCTTAGTATCCCAGACTAAGAG
CCTTGAGGTCTTGCATGGCAGTGCCTCCATGCTGTTTGCTGGGAGGTTGTTAAACCTTCATTCC
CTAGTGACTCTGTTTTTTCACATAGCACTCTCTTGCCATTGGTGACCATAAACCTTCTGAGAAG
TTGAAACTCTGACTTTAGGGAAACCTCCGTTTTGTTATGTTTAATCAGATTCCTTCCACTTCCC
TTTATCCTTTCGGAGTTTTTTTTTTTTAGGTCACAGTGCACACCTGCACTGTTTGTGTGGGTGC
CTAGTTGTGAGGCGACTGCAGTAACAAAGCTAGAATCTGGCTTTGCCCTTCTCATAATATCTTT
AGAAATATATAAAGGGGGTTGGAGTAATCACTCTAGTTTAGGAAAAGAATGACTGACTTAAGTA
AGAAAGACACATAGCCAGAGCTTCTGGTTTAAAATCAGCTTCTATTTGGCTTCCCTTGGGAAGC
TACCAGGACCTCCACAGTGCTAGGACTCCCTTAAAAGATCTTTGTAGTAATGGTAGCATTGTGG
CATCTAGGGTTCTTAGATCACCAATAATCCCATGCCCAGATGATGGCCCACACGCACAGATTTA
CATAAACACACGTATACCATGGCCTCATCAGCCAAAGATAGGTGACGGCTAAGATTGGTTCTGA
ATGCAAAGAAAAAGACTTTAACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_008762166 ⟹ XP_008760388

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	128,555,709 - 128,583,809 (+)	NCBI
mRatBN7.2	3	108,101,962 - 108,118,177 (+)	NCBI
Rnor_6.0	3	113,091,696 - 113,109,841 (+)	NCBI

Sequence:

show sequence

GCGCTGGCGGCTTCGCGGGCCCATGACCAGAAGGCGCTCCGCAATTCTCCACACAGAACGTTCA
CCGAACTCCAGCTCTCCCGCTTCCGGTATAGGTGAAAGTGATCCGAAAGCTACACATAGAGCAA
GTCTTCTTAAAATATGGCAATCTGAAGAAAGTCCAGCACCTCAGAAATTATGATTTTGTAAGTT
GTATTGTCCAAGCCAAGAATAAAATCCAAGAGAAACTTTCCTTCTACTAAAGTGATGGAGGCCA
GACAGCAGTGGGCACGGAAGACAGACTTTTACATGCAATTGCCAAAAGTGGAGCTTCACGCCCA
CTTGAATGGCTCCATTAGTTCCAGTACCATGAGGAAATTAATAGCCAAGAAGCCACATCTTCAA
GTTCATGGTCACATGACAATGATTGACAAGGGAAAGAAAAGGACTTTAGAAGAATGTTTCCAGA
TGTTCCAAGTTATTCATCAGCTTACTACTAGTGCTGAGGACATCCTGATGGTCACAAAAGATGT
CATTAAGGAGTTTGCAGATGATGGTGTCAAGTACCTGGAGCTGAGGAGCACTCCCAGAGGAGAA
AATGCTACTGGCATGACTAGGAAGACTTACGTGGAATCCGTACTGGAAGGCATAAAACAGTGCA
AACAAGAAAACTTAGACATTGACGTTAGGTATTTGATGGCAATTGACAGAAAAGGTGGCCCGAC
AGTAGCCAAGGAGACTGTCAAACTTGCTAAAGAGTTCTTCCTCTCTGCTGAGGATACAGTTCTT
GGCCTTGACCTCAGTGGAGATCCAACTATCGGACAAGCAAAAGACTTCTTGGAGCCTCTTTTAG
AAGCTAAAAAAGCAGGCCTGAAGTTGGCGTTGCATCTTGCAGAGATTCCAAATAAGGAAAAAGA
AACACAGATGTTGCTGGATCTGCTTCCTGACAGAATTGGGCATGGAACATTCCTCAACACCCCC
GAGGCAGGGTCAGTGGATCAGGTGAACTTCGTGAGGCAACACCGGATACCTCTTGAACTTTGTT
TGACCTCAAACATCAAAAGCCAGACAGTTCCTTCTTATGACCAGCATCACTTTGGATTCTGGTA
TAGCGTTGCTCATCCTTCTGTGATCTGTACCGATGATAAAGGTGTTTTTGCAACAAGCCTTTCT
CAAGAATATCAACTGGCAGCAGAAACATTTAATCTGACCCCATCGCAGGTGTGGGATCTGTCTT
ATGAATCCATCAACTACATCTTCGCTTCTAACAACACCAGATCTGAACTGAGAAAAAGGTGGAC
TCACCTGAAACAGAAAGTGTTAGGCTGTAACGAGGTGAACTACTTTTGATTATACGTCGTAACC
AAGGTCTTCCTGCCCTGTGTACCCCACTCAGTTACTGCCCACTTGAAATTACTTCAAGTTCAGT
AGCCAAGTATATATGGGTCTAACTCCAGCACCTTCATATGGTAAGTGCTTAGTATCCCAGACTA
AGAGCCTTGAGGTCTTGCATGGCAGTGCCTCCATGCTGTTTGCTGGGAGGTTGTTAAACCTTCA
TTCCCTAGTGACTCTGTTTTTTCACATAGCACTCTCTTGCCATTGGTGACCATAAACCTTCTGA
GAAGTTGAAACTCTGACTTTAGGGAAACCTCCGTTTTGTTATGTTTAATCAGATTCCTTCCACT
TCCCTTTATCCTTTCGGAGTTTTTTTTTTTTAGGTCACAGTGCACACCTGCACTGTTTGTGTGG
GTGCCTAGTTGTGAGGCGACTGCAGTAACAAAGCTAGAATCTGGCTTTGCCCTTCTCATAATAT
CTTTAGAAATATATAAAGGGGGTTGGAGTAATCACTCTAGTTTAGGAAAAGAATGACTGACTTA
AGTAAGAAAGACACATAGCCAGAGCTTCTGGTTTAAAATCAGCTTCTATTTGGCTTCCCTTGGG
AAGCTACCAGGACCTCCACAGTGCTAGGACTCCCTTAAAAGATCTTTGTAGTAATGGTAGCATT
GTGGCATCTAGGGTTCTTAGATCACCAATAATCCCATGCCCAGATGATGGCCCACACGCACAGA
TTTACATAAACACACGTATACCATGGCCTCATCAGCCAAAGATAGGTGACGGCTAAGATTGGTT
CTGAATGCAAAGAAAAAGACTTTAACAGATAACAAATGTCTTGGATATTTTTTTTCCACAAGCT
AGAGTCATTTGGGAAGAGGGACCCTCAACTGAGAAAATGCTCCCACAAGATCGGCTTAATCAGT
GCTTGAGCAGTTAGTGGGCTCATGCCACAGAGGGTGATGCCCCCTCAGGGATGTGGTTTTGGTG
GAAAGTGAAGGAAATGGAACATGAGGAGCAAGCTATAGGCAGCACTCCTCTATGGCTCAGCTTC
AGTTCCTGCCTCAGCTTCCCAGGATGAGGGACTACAAATTATGAGGCAATAAACCCCTTCCTCC
TCAAGTTACTTTTGGTGATGGTGTTTATCACAGCATTAAAAACACTAAACTAATAACGTATGCT
TGAATTATTCTCCTTCTTAGAATGTATGGTTTCCCTGATCTCAGAGAAGAAACCTGGTGGCACC
CTTAATTCAATAAAGGTTGAGATTTTTGTTTCTGCCTTTTAGGGTACATGATAAAGGAAAGTAC
TTAATTTTCAAAGTTCTTAGTTATTGTTTTATAACCTTATATTTCTAACTATATCCACTTACAC
AATAAAATCTGTAAAATGTAACCTTTTTTCTTTACTGTGCTGGGGAATTGAATACAGGGCCTTC
AGTACATCCACACCCTCGATGTAGGCATTTCAAAGTATTATAAAAAATAGACAGAAAGTTAGTA
TGTATAATATATCCAGTGAGAAAATATGGAAAAGTAATAACAAACATGATGAGAGCAGATGACA
ATATTGTTTCTATGTAGTGCACATTTCTGTGTATGCCTCTCCCGAAAAGGCTGTAGACATGAAA
GGACTAGAGGCCTAGACCCCTTGCTCCTCCTCCGTGCTTTCTCTTAGACTGACTTTTGCTCCTA
TTCATCCTCAGCACTGGCAGTATTTGTGCCCAGTTTTCCTGTAGTAATGAGAGTACACTCTTTT
CTTTTTACATTCTTCTCCTTTGTAAGTTGATGAGTTGGTCCTATGTATTTTAAAACTTTGCCCA
GTTAATGTGATATGATTTTTTTTTCTTTTTTTCAGAGCTGAGGACTGAACCCAGGGCCTTGGGC
TTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCATGTGATATGATTTTAATTTG
TTCCTTTGCCTACCATGTAAAGGTTCAAACAGATAACTCAAAA

hide sequence

RefSeq Acc Id:

XM_008762167 ⟹ XP_008760389

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	128,557,704 - 128,583,809 (+)	NCBI
mRatBN7.2	3	108,103,960 - 108,119,557 (+)	NCBI
Rnor_6.0	3	113,093,704 - 113,109,841 (+)	NCBI

Sequence:

show sequence

GAAAAGGACTTTAGAAGAATGTTTCCAGATGTTCCAAGTTATTCATCAGCTTACTACTAGTGCT
GAGGACATCCTGATGGCATGACTAGGAAGACTTACGTGGAATCCGTACTGGAAGGCATAAAACA
GTGCAAACAAGAAAACTTAGACATTGACGTTAGGTATTTGATGGCAATTGACAGAAAAGGTGGC
CCGACAGTAGCCAAGGAGACTGTCAAACTTGCTAAAGAGTTCTTCCTCTCTGCTGAGGATACAG
TTCTTGGCCTTGACCTCAGTGGAGATCCAACTATCGGACAAGCAAAAGACTTCTTGGAGCCTCT
TTTAGAAGCTAAAAAAGCAGGCCTGAAGTTGGCGTTGCATCTTGCAGAGATTCCAAATAAGGAA
AAAGAAACACAGATGTTGCTGGATCTGCTTCCTGACAGAATTGGGCATGGAACATTCCTCAACA
CCCCCGAGGCAGGGTCAGTGGATCAGGTGAACTTCGTGAGGCAACACCGGATACCTCTTGAACT
TTGTTTGACCTCAAACATCAAAAGCCAGACAGTTCCTTCTTATGACCAGCATCACTTTGGATTC
TGGTATAGCGTTGCTCATCCTTCTGTGATCTGTACCGATGATAAAGGTGTTTTTGCAACAAGCC
TTTCTCAAGAATATCAACTGGCAGCAGAAACATTTAATCTGACCCCATCGCAGGTGTGGGATCT
GTCTTATGAATCCATCAACTACATCTTCGCTTCTAACAACACCAGATCTGAACTGAGAAAAAGG
TGGACTCACCTGAAACAGAAAGTGTTAGGCTGTAACGAGGTGAACTACTTTTGATTATACGTCG
TAACCAAGGTCTTCCTGCCCTGTGTACCCCACTCAGTTACTGCCCACTTGAAATTACTTCAAGT
TCAGTAGCCAAGTATATATGGGTCTAACTCCAGCACCTTCATATGGTAAGTGCTTAGTATCCCA
GACTAAGAGCCTTGAGGTCTTGCATGGCAGTGCCTCCATGCTGTTTGCTGGGAGGTTGTTAAAC
CTTCATTCCCTAGTGACTCTGTTTTTTCACATAGCACTCTCTTGCCATTGGTGACCATAAACCT
TCTGAGAAGTTGAAACTCTGACTTTAGGGAAACCTCCGTTTTGTTATGTTTAATCAGATTCCTT
CCACTTCCCTTTATCCTTTCGGAGTTTTTTTTTTTTAGGTCACAGTGCACACCTGCACTGTTTG
TGTGGGTGCCTAGTTGTGAGGCGACTGCAGTAACAAAGCTAGAATCTGGCTTTGCCCTTCTCAT
AATATCTTTAGAAATATATAAAGGGGGTTGGAGTAATCACTCTAGTTTAGGAAAAGAATGACTG
ACTTAAGTAAGAAAGACACATAGCCAGAGCTTCTGGTTTAAAATCAGCTTCTATTTGGCTTCCC
TTGGGAAGCTACCAGGACCTCCACAGTGCTAGGACTCCCTTAAAAGATCTTTGTAGTAATGGTA
GCATTGTGGCATCTAGGGTTCTTAGATCACCAATAATCCCATGCCCAGATGATGGCCCACACGC
ACAGATTTACATAAACACACGTATACCATGGCCTCATCAGCCAAAGATAGGTGACGGCTAAGAT
TGGTTCTGAATGCAAAGAAAAAGACTTTAACAGATAACAAATGTCTTGGATATTTTTTTTCCAC
AAGCTAGAGTCATTTGGGAAGAGGGACCCTCAACTGAGAAAATGCTCCCACAAGATCGGCTTAA
TCAGTGCTTGAGCAGTTAGTGGGCTCATGCCACAGAGGGTGATGCCCCCTCAGGGATGTGGTTT
TGGTGGAAAGTGAAGGAAATGGAACATGAGGAGCAAGCTATAGGCAGCACTCCTCTATGGCTCA
GCTTCAGTTCCTGCCTCAGCTTCCCAGGATGAGGGACTACAAATTATGAGGCAATAAACCCCTT
CCTCCTCAAGTTACTTTTGGTGATGGTGTTTATCACAGCATTAAAAACACTAAACTAATAACGT
ATGCTTGAATTATTCTCCTTCTTAGAATGTATGGTTTCCCTGATCTCAGAGAAGAAACCTGGTG
GCACCCTTAATTCAATAAAGGTTGAGATTTTTGTTTCTGCCTTTTAGGGTACATGATAAAGGAA
AGTACTTAATTTTCAAAGTTCTTAGTTATTGTTTTATAACCTTATATTTCTAACTATATCCACT
TACACAATAAAATCTGTAAAATGTAACCTTTTTTCTTTACTGTGCTGGGGAATTGAATACAGGG
CCTTCAGTACATCCACACCCTCGATGTAGGCATTTCAAAGTATTATAAAAAATAGACAGAAAGT
TAGTATGTATAATATATCCAGTGAGAAAATATGGAAAAGTAATAACAAACATGATGAGAGCAGA
TGACAATATTGTTTCTATGTAGTGCACATTTCTGTGTATGCCTCTCCCGAAAAGGCTGTAGACA
TGAAAGGACTAGAGGCCTAGACCCCTTGCTCCTCCTCCGTGCTTTCTCTTAGACTGACTTTTGC
TCCTATTCATCCTCAGCACTGGCAGTATTTGTGCCCAGTTTTCCTGTAGTAATGAGAGTACACT
CTTTTCTTTTTACATTCTTCTCCTTTGTAAGTTGATGAGTTGGTCCTATGTATTTTAAAACTTT
GCCCAGTTAATGTGATATGATTTTTTTTTCTTTTTTTCAGAGCTGAGGACTGAACCCAGGGCCT
TGGGCTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCATGTGATATGATTTTA
ATTTGTTCCTTTGCCTACCATGTAAAGGTTCAAACAGATAACTCAAAA

hide sequence

RefSeq Acc Id:

XM_008762169 ⟹ XP_008760391

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	128,555,715 - 128,583,809 (+)	NCBI
mRatBN7.2	3	108,101,863 - 108,119,557 (+)	NCBI
Rnor_6.0	3	113,091,707 - 113,109,243 (+)	NCBI

Sequence:

show sequence

TTCGCGGGCCCATGACCAGAAGGCGCTCCGCAATTCTCCACACAGAACGTTCACCGAACTCCAG
CTCTCCCGCTTCCGGGAGCTTCACGCCCACTTGAATGGCTCCATTAGTTCCAGTACCATGAGGA
AATTAATAGCCAAGAAGCCACATCTTCAAGTTCATGGTCACATGACAATGATTGACAAGGGAAA
GAAAAGGACTTTAGAAGAATGTTTCCAGATGTTCCAAGTTATTCATCAGCTTACTACTAGTGCT
GAGGACATCCTGATGGTCACAAAAGATGTCATTAAGGAGTTTGCAGATGATGGTGTCAAGTACC
TGGAGCTGAGGAGCACTCCCAGAGGAGAAAATGCTACTGGCATGACTAGGAAGACTTACGTGGA
ATCCGTACTGGAAGGCATAAAACAGTGCAAACAAGAAAACTTAGACATTGACGTTAGGTATTTG
ATGGCAATTGACAGAAAAGGTGGCCCGACAGTAGCCAAGGAGACTGTCAAACTTGCTAAAGAGT
TCTTCCTCTCTGCTGAGGATACAGTTCTTGGCCTTGACCTCAGTGGAGATCCAACTATCGGACA
AGCAAAAGACTTCTTGGAGCCTCTTTTAGAAGCTAAAAAAGCAGGCCTGAAGTTGGCGTTGCAT
CTTGCAGAGATTCCAAATAAGGAAAAAGAAACACAGATGTTGCTGGATCTGCTTCCTGACAGAA
TTGGGCATGGAACATTCCTCAACACCCCCGAGGCAGGGTCAGTGGATCAGGTGAACTTCGTGAG
GCAACACCGGATACCTCTTGAACTTTGTTTGACCTCAAACATCAAAAGCCAGACAGTTCCTTCT
TATGACCAGCATCACTTTGGATTCTGGTATAGCGTTGCTCATCCTTCTGTGATCTGTACCGATG
ATAAAGGTGTTTTTGCAACAAGCCTTTCTCAAGAATATCAACTGGCAGCAGAAACATTTAATCT
GACCCCATCGCAGGTGTGGGATCTGTCTTATGAATCCATCAACTACATCTTCGCTTCTAACAAC
ACCAGATCTGAACTGAGAAAAAGGTGGACTCACCTGAAACAGAAAGTGTTAGGCTGTAACGAGG
TGAACTACTTTTGATTATACGTCGTAACCAAGGTCTTCCTGCCCTGTGTACCCCACTCAGTTAC
TGCCCACTTGAAATTACTTCAAGTTCAGTAGCCAAGTATATATGGGTCTAACTCCAGCACCTTC
ATATGGTAAGTGCTTAGTATCCCAGACTAAGAGCCTTGAGGTCTTGCATGGCAGTGCCTCCATG
CTGTTTGCTGGGAGGTTGTTAAACCTTCATTCCCTAGTGACTCTGTTTTTTCACATAGCACTCT
CTTGCCATTGGTGACCATAAACCTTCTGAGAAGTTGAAACTCTGACTTTAGGGAAACCTCCGTT
TTGTTATGTTTAATCAGATTCCTTCCACTTCCCTTTATCCTTTCGGAGTTTTTTTTTTTTAGGT
CACAGTGCACACCTGCACTGTTTGTGTGGGTGCCTAGTTGTGAGGCGACTGCAGTAACAAAGCT
AGAATCTGGCTTTGCCCTTCTCATAATATCTTTAGAAATATATAAAGGGGGTTGGAGTAATCAC
TCTAGTTTAGGAAAAGAATGACTGACTTAAGTAAGAAAGACACATAGCCAGAGCTTCTGGTTTA
AAATCAGCTTCTATTTGGCTTCCCTTGGGAAGCTACCAGGACCTCCACAGTGCTAGGACTCCCT
TAAAAGATCTTTGTAGTAATGGTAGCATTGTGGCATCTAGGGTTCTTAGATCACCAATAATCCC
ATGCCCAGATGATGGCCCACACGCACAGATTTACATAAACACACGTATACCATGGCCTCATCAG
CCAAAGATAGGTGACGGCTAAGATTGGTTCTGAATGCAAAGAAAAAGACTTTAACAGATAACAA
ATGTCTTGGATATTTTTTTTCCACAAGCTAGAGTCATTTGGGAAGAGGGACCCTCAACTGAGAA
AATGCTCCCACAAGATCGGCTTAATCAGTGCTTGAGCAGTTAGTGGGCTCATGCCACAGAGGGT
GATGCCCCCTCAGGGATGTGGTTTTGGTGGAAAGTGAAGGAAATGGAACATGAGGAGCAAGCTA
TAGGCAGCACTCCTCTATGGCTCAGCTTCAGTTCCTGCCTCAGCTTCCCAGGATGAGGGACTAC
AAATTATGAGGCAATAAACCCCTTCCTCCTCAAGTTACTTTTGGTGATGGTGTTTATCACAGCA
TTAAAAACACTAAACTAATAACGTATGCTTGAATTATTCTCCTTCTTAGAATGTATGGTTTCCC
TGATCTCAGAGAAGAAACCTGGTGGCACCCTTAATTCAATAAAGGTTGAGATTTTTGTTTCTGC
CTTTTAGGGTACATGATAAAGGAAAGTACTTAATTTTCAAAGTTCTTAGTTATTGTTTTATAAC
CTTATATTTCTAACTATATCCACTTACACAATAAAATCTGTAAAATGTAA

hide sequence

RefSeq Acc Id:

XM_017591734 ⟹ XP_017447223

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	128,555,710 - 128,583,809 (+)	NCBI
mRatBN7.2	3	108,101,964 - 108,118,177 (+)	NCBI
Rnor_6.0	3	113,091,699 - 113,109,841 (+)	NCBI

Sequence:

show sequence

CTGGCGGCTTCGCGGGCCCATGACCAGAAGGCGCTCCGCAATTCTCCACACAGAACGTTCACCG
AACTCCAGCTCTCCCGCTTCCGGGTGAAAGTGATCCGAAAGCTACACATAGAGCAAGTCTTCTT
AAAATATGGCAATCTGAAGAAAGTCCAGCACCTCAGAAATTATGATTTTGTAAGTTGTATTGTC
CAAGCCAAGAATAAAATCCAAGAGAAACTTTCCTTCTACTAAAGTGATGGAGGCCAGACAGCAG
TGGGCACGGAAGACAGACTTTTACATGCAATTGCCAAAAGTGGAGCTTCACGCCCACTTGAATG
GCTCCATTAGTTCCAGTACCATGAGGAAATTAATAGCCAAGAAGCCACATCTTCAAGTTCATGG
TCACATGACAATGATTGACAAGGGAAAGAAAAGGACTTTAGAAGAATGTTTCCAGATGTTCCAA
GTTATTCATCAGCTTACTACTAGTGCTGAGGACATCCTGATGGTCACAAAAGATGTCATTAAGG
AGTTTGCAGATGATGGTGTCAAGTACCTGGAGCTGAGGAGCACTCCCAGAGGAGAAAATGCTAC
TGGCATGACTAGGAAGACTTACGTGGAATCCGTACTGGAAGGCATAAAACAGTGCAAACAAGAA
AACTTAGACATTGACGTTAGGTATTTGATGGCAATTGACAGAAAAGGTGGCCCGACAGTAGCCA
AGGAGACTGTCAAACTTGCTAAAGAGTTCTTCCTCTCTGCTGAGGATACAGTTCTTGGCCTTGA
CCTCAGTGGAGATCCAACTATCGGACAAGCAAAAGACTTCTTGGAGCCTCTTTTAGAAGCTAAA
AAAGCAGGCCTGAAGTTGGCGTTGCATCTTGCAGAGATTCCAAATAAGGAAAAAGAAACACAGA
TGTTGCTGGATCTGCTTCCTGACAGAATTGGGCATGGAACATTCCTCAACACCCCCGAGGCAGG
GTCAGTGGATCAGGTGAACTTCGTGAGGCAACACCGGATACCTCTTGAACTTTGTTTGACCTCA
AACATCAAAAGCCAGACAGTTCCTTCTTATGACCAGCATCACTTTGGATTCTGGTATAGCGTTG
CTCATCCTTCTGTGATCTGTACCGATGATAAAGGTGTTTTTGCAACAAGCCTTTCTCAAGAATA
TCAACTGGCAGCAGAAACATTTAATCTGACCCCATCGCAGGTGTGGGATCTGTCTTATGAATCC
ATCAACTACATCTTCGCTTCTAACAACACCAGATCTGAACTGAGAAAAAGGTGGACTCACCTGA
AACAGAAAGTGTTAGGCTGTAACGAGGTGAACTACTTTTGATTATACGTCGTAACCAAGGTCTT
CCTGCCCTGTGTACCCCACTCAGTTACTGCCCACTTGAAATTACTTCAAGTTCAGTAGCCAAGT
ATATATGGGTCTAACTCCAGCACCTTCATATGGTAAGTGCTTAGTATCCCAGACTAAGAGCCTT
GAGGTCTTGCATGGCAGTGCCTCCATGCTGTTTGCTGGGAGGTTGTTAAACCTTCATTCCCTAG
TGACTCTGTTTTTTCACATAGCACTCTCTTGCCATTGGTGACCATAAACCTTCTGAGAAGTTGA
AACTCTGACTTTAGGGAAACCTCCGTTTTGTTATGTTTAATCAGATTCCTTCCACTTCCCTTTA
TCCTTTCGGAGTTTTTTTTTTTTAGGTCACAGTGCACACCTGCACTGTTTGTGTGGGTGCCTAG
TTGTGAGGCGACTGCAGTAACAAAGCTAGAATCTGGCTTTGCCCTTCTCATAATATCTTTAGAA
ATATATAAAGGGGGTTGGAGTAATCACTCTAGTTTAGGAAAAGAATGACTGACTTAAGTAAGAA
AGACACATAGCCAGAGCTTCTGGTTTAAAATCAGCTTCTATTTGGCTTCCCTTGGGAAGCTACC
AGGACCTCCACAGTGCTAGGACTCCCTTAAAAGATCTTTGTAGTAATGGTAGCATTGTGGCATC
TAGGGTTCTTAGATCACCAATAATCCCATGCCCAGATGATGGCCCACACGCACAGATTTACATA
AACACACGTATACCATGGCCTCATCAGCCAAAGATAGGTGACGGCTAAGATTGGTTCTGAATGC
AAAGAAAAAGACTTTAACAGATAACAAATGTCTTGGATATTTTTTTTCCACAAGCTAGAGTCAT
TTGGGAAGAGGGACCCTCAACTGAGAAAATGCTCCCACAAGATCGGCTTAATCAGTGCTTGAGC
AGTTAGTGGGCTCATGCCACAGAGGGTGATGCCCCCTCAGGGATGTGGTTTTGGTGGAAAGTGA
AGGAAATGGAACATGAGGAGCAAGCTATAGGCAGCACTCCTCTATGGCTCAGCTTCAGTTCCTG
CCTCAGCTTCCCAGGATGAGGGACTACAAATTATGAGGCAATAAACCCCTTCCTCCTCAAGTTA
CTTTTGGTGATGGTGTTTATCACAGCATTAAAAACACTAAACTAATAACGTATGCTTGAATTAT
TCTCCTTCTTAGAATGTATGGTTTCCCTGATCTCAGAGAAGAAACCTGGTGGCACCCTTAATTC
AATAAAGGTTGAGATTTTTGTTTCTGCCTTTTAGGGTACATGATAAAGGAAAGTACTTAATTTT
CAAAGTTCTTAGTTATTGTTTTATAACCTTATATTTCTAACTATATCCACTTACACAATAAAAT
CTGTAAAATGTAACCTTTTTTCTTTACTGTGCTGGGGAATTGAATACAGGGCCTTCAGTACATC
CACACCCTCGATGTAGGCATTTCAAAGTATTATAAAAAATAGACAGAAAGTTAGTATGTATAAT
ATATCCAGTGAGAAAATATGGAAAAGTAATAACAAACATGATGAGAGCAGATGACAATATTGTT
TCTATGTAGTGCACATTTCTGTGTATGCCTCTCCCGAAAAGGCTGTAGACATGAAAGGACTAGA
GGCCTAGACCCCTTGCTCCTCCTCCGTGCTTTCTCTTAGACTGACTTTTGCTCCTATTCATCCT
CAGCACTGGCAGTATTTGTGCCCAGTTTTCCTGTAGTAATGAGAGTACACTCTTTTCTTTTTAC
ATTCTTCTCCTTTGTAAGTTGATGAGTTGGTCCTATGTATTTTAAAACTTTGCCCAGTTAATGT
GATATGATTTTTTTTTCTTTTTTTCAGAGCTGAGGACTGAACCCAGGGCCTTGGGCTTGCTAGG
CAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCATGTGATATGATTTTAATTTGTTCCTTTG
CCTACCATGTAAAGGTTCAAACAGATAACTCAAAA

hide sequence

RefSeq Acc Id:

XM_017591736 ⟹ XP_017447225

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	128,557,708 - 128,583,809 (+)	NCBI
mRatBN7.2	3	108,103,961 - 108,119,557 (+)	NCBI
Rnor_6.0	3	113,093,702 - 113,109,841 (+)	NCBI

Sequence:

show sequence

AAGAAAAGGACTTTAGAAGAATGTTTCCAGATGTTCCAAGTTATTCATCAGCTTACTACTAGTG
CTGAGGACATCCTGATGGTATTTGATGGCAATTGACAGAAAAGGTGGCCCGACAGTAGCCAAGG
AGACTGTCAAACTTGCTAAAGAGTTCTTCCTCTCTGCTGAGGATACAGTTCTTGGCCTTGACCT
CAGTGGAGATCCAACTATCGGACAAGCAAAAGACTTCTTGGAGCCTCTTTTAGAAGCTAAAAAA
GCAGGCCTGAAGTTGGCGTTGCATCTTGCAGAGATTCCAAATAAGGAAAAAGAAACACAGATGT
TGCTGGATCTGCTTCCTGACAGAATTGGGCATGGAACATTCCTCAACACCCCCGAGGCAGGGTC
AGTGGATCAGGTGAACTTCGTGAGGCAACACCGGATACCTCTTGAACTTTGTTTGACCTCAAAC
ATCAAAAGCCAGACAGTTCCTTCTTATGACCAGCATCACTTTGGATTCTGGTATAGCGTTGCTC
ATCCTTCTGTGATCTGTACCGATGATAAAGGTGTTTTTGCAACAAGCCTTTCTCAAGAATATCA
ACTGGCAGCAGAAACATTTAATCTGACCCCATCGCAGGTGTGGGATCTGTCTTATGAATCCATC
AACTACATCTTCGCTTCTAACAACACCAGATCTGAACTGAGAAAAAGGTGGACTCACCTGAAAC
AGAAAGTGTTAGGCTGTAACGAGGTGAACTACTTTTGATTATACGTCGTAACCAAGGTCTTCCT
GCCCTGTGTACCCCACTCAGTTACTGCCCACTTGAAATTACTTCAAGTTCAGTAGCCAAGTATA
TATGGGTCTAACTCCAGCACCTTCATATGGTAAGTGCTTAGTATCCCAGACTAAGAGCCTTGAG
GTCTTGCATGGCAGTGCCTCCATGCTGTTTGCTGGGAGGTTGTTAAACCTTCATTCCCTAGTGA
CTCTGTTTTTTCACATAGCACTCTCTTGCCATTGGTGACCATAAACCTTCTGAGAAGTTGAAAC
TCTGACTTTAGGGAAACCTCCGTTTTGTTATGTTTAATCAGATTCCTTCCACTTCCCTTTATCC
TTTCGGAGTTTTTTTTTTTTAGGTCACAGTGCACACCTGCACTGTTTGTGTGGGTGCCTAGTTG
TGAGGCGACTGCAGTAACAAAGCTAGAATCTGGCTTTGCCCTTCTCATAATATCTTTAGAAATA
TATAAAGGGGGTTGGAGTAATCACTCTAGTTTAGGAAAAGAATGACTGACTTAAGTAAGAAAGA
CACATAGCCAGAGCTTCTGGTTTAAAATCAGCTTCTATTTGGCTTCCCTTGGGAAGCTACCAGG
ACCTCCACAGTGCTAGGACTCCCTTAAAAGATCTTTGTAGTAATGGTAGCATTGTGGCATCTAG
GGTTCTTAGATCACCAATAATCCCATGCCCAGATGATGGCCCACACGCACAGATTTACATAAAC
ACACGTATACCATGGCCTCATCAGCCAAAGATAGGTGACGGCTAAGATTGGTTCTGAATGCAAA
GAAAAAGACTTTAACAGATAACAAATGTCTTGGATATTTTTTTTCCACAAGCTAGAGTCATTTG
GGAAGAGGGACCCTCAACTGAGAAAATGCTCCCACAAGATCGGCTTAATCAGTGCTTGAGCAGT
TAGTGGGCTCATGCCACAGAGGGTGATGCCCCCTCAGGGATGTGGTTTTGGTGGAAAGTGAAGG
AAATGGAACATGAGGAGCAAGCTATAGGCAGCACTCCTCTATGGCTCAGCTTCAGTTCCTGCCT
CAGCTTCCCAGGATGAGGGACTACAAATTATGAGGCAATAAACCCCTTCCTCCTCAAGTTACTT
TTGGTGATGGTGTTTATCACAGCATTAAAAACACTAAACTAATAACGTATGCTTGAATTATTCT
CCTTCTTAGAATGTATGGTTTCCCTGATCTCAGAGAAGAAACCTGGTGGCACCCTTAATTCAAT
AAAGGTTGAGATTTTTGTTTCTGCCTTTTAGGGTACATGATAAAGGAAAGTACTTAATTTTCAA
AGTTCTTAGTTATTGTTTTATAACCTTATATTTCTAACTATATCCACTTACACAATAAAATCTG
TAAAATGTAACCTTTTTTCTTTACTGTGCTGGGGAATTGAATACAGGGCCTTCAGTACATCCAC
ACCCTCGATGTAGGCATTTCAAAGTATTATAAAAAATAGACAGAAAGTTAGTATGTATAATATA
TCCAGTGAGAAAATATGGAAAAGTAATAACAAACATGATGAGAGCAGATGACAATATTGTTTCT
ATGTAGTGCACATTTCTGTGTATGCCTCTCCCGAAAAGGCTGTAGACATGAAAGGACTAGAGGC
CTAGACCCCTTGCTCCTCCTCCGTGCTTTCTCTTAGACTGACTTTTGCTCCTATTCATCCTCAG
CACTGGCAGTATTTGTGCCCAGTTTTCCTGTAGTAATGAGAGTACACTCTTTTCTTTTTACATT
CTTCTCCTTTGTAAGTTGATGAGTTGGTCCTATGTATTTTAAAACTTTGCCCAGTTAATGTGAT
ATGATTTTTTTTTCTTTTTTTCAGAGCTGAGGACTGAACCCAGGGCCTTGGGCTTGCTAGGCAA
GCGCTCTACCACTGAGCTAAATCCCCAACCCCATGTGATATGATTTTAATTTGTTCCTTTGCCT
ACCATGTAAAGGTTCAAACAGATAACTCAAAA

hide sequence

RefSeq Acc Id:

XM_039104953 ⟹ XP_038960881

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	128,556,334 - 128,583,809 (+)	NCBI
mRatBN7.2	3	108,102,592 - 108,118,177 (+)	NCBI

RefSeq Acc Id:

XM_039104954 ⟹ XP_038960882

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	128,555,917 - 128,583,809 (+)	NCBI
mRatBN7.2	3	108,102,168 - 108,118,177 (+)	NCBI

RefSeq Acc Id:

XM_039104955 ⟹ XP_038960883

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	128,555,914 - 128,583,809 (+)	NCBI
mRatBN7.2	3	108,102,180 - 108,119,557 (+)	NCBI

RefSeq Acc Id:

XM_063283714 ⟹ XP_063139784

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	128,556,314 - 128,583,809 (+)	NCBI

RefSeq Acc Id:

XM_063283715 ⟹ XP_063139785

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	128,558,453 - 128,583,809 (+)	NCBI

RefSeq Acc Id:

XM_063283716 ⟹ XP_063139786

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	128,558,376 - 128,583,809 (+)	NCBI

RefSeq Acc Id:

XM_063283717 ⟹ XP_063139787

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	128,555,710 - 128,567,394 (+)	NCBI

RefSeq Acc Id:

XR_010064618

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	128,555,710 - 128,583,809 (+)	NCBI

RefSeq Acc Id:

XR_010064619

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	128,555,710 - 128,568,929 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001014069	(Get FASTA)	NCBI Sequence Viewer
	XP_008760388	(Get FASTA)	NCBI Sequence Viewer
	XP_008760389	(Get FASTA)	NCBI Sequence Viewer
	XP_008760391	(Get FASTA)	NCBI Sequence Viewer
	XP_017447223	(Get FASTA)	NCBI Sequence Viewer
	XP_017447225	(Get FASTA)	NCBI Sequence Viewer
	XP_038960881	(Get FASTA)	NCBI Sequence Viewer
	XP_038960882	(Get FASTA)	NCBI Sequence Viewer
	XP_038960883	(Get FASTA)	NCBI Sequence Viewer
	XP_063139784	(Get FASTA)	NCBI Sequence Viewer
	XP_063139785	(Get FASTA)	NCBI Sequence Viewer
	XP_063139786	(Get FASTA)	NCBI Sequence Viewer
	XP_063139787	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH89959	(Get FASTA)	NCBI Sequence Viewer
	EDL79974	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000016529.8
	ENSRNOP00000082379.1
	ENSRNOP00000094885.1
	ENSRNOP00000100104.1
	ENSRNOP00000105046.1
	ENSRNOP00000105230.1
	ENSRNOP00000111630
	ENSRNOP00000111630.1

RefSeq Acc Id:

NP_001014069 ⟸ NM_001014047

- Sequence:

show sequence

MAIDRKGGPTVAKETVKLAKEFFLSAEDTVLGLDLSGDPTIGQAKDFLEPLLEAKKAGLKLALH
LAEIPNKEKETQMLLDLLPDRIGHGTFLNTPEAGSVDQVNFVRQHRIPLELCLTSNIKSQTVPS
YDQHHFGFWYSVAHPSVICTDDKGVFATSLSQEYQLAAETFNLTPSQVWDLSYESINYIFASNN
TRSELRKRWTHLKQKVLGCNEVNYF

hide sequence

RefSeq Acc Id:

XP_008760391 ⟸ XM_008762169

- Peptide Label:

isoform X3

- Sequence:

show sequence

MRKLIAKKPHLQVHGHMTMIDKGKKRTLEECFQMFQVIHQLTTSAEDILMVTKDVIKEFADDGV
KYLELRSTPRGENATGMTRKTYVESVLEGIKQCKQENLDIDVRYLMAIDRKGGPTVAKETVKLA
KEFFLSAEDTVLGLDLSGDPTIGQAKDFLEPLLEAKKAGLKLALHLAEIPNKEKETQMLLDLLP
DRIGHGTFLNTPEAGSVDQVNFVRQHRIPLELCLTSNIKSQTVPSYDQHHFGFWYSVAHPSVIC
TDDKGVFATSLSQEYQLAAETFNLTPSQVWDLSYESINYIFASNNTRSELRKRWTHLKQKVLGC
NEVNYF

hide sequence

RefSeq Acc Id:

XP_008760388 ⟸ XM_008762166

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEARQQWARKTDFYMQLPKVELHAHLNGSISSSTMRKLIAKKPHLQVHGHMTMIDKGKKRTLEE
CFQMFQVIHQLTTSAEDILMVTKDVIKEFADDGVKYLELRSTPRGENATGMTRKTYVESVLEGI
KQCKQENLDIDVRYLMAIDRKGGPTVAKETVKLAKEFFLSAEDTVLGLDLSGDPTIGQAKDFLE
PLLEAKKAGLKLALHLAEIPNKEKETQMLLDLLPDRIGHGTFLNTPEAGSVDQVNFVRQHRIPL
ELCLTSNIKSQTVPSYDQHHFGFWYSVAHPSVICTDDKGVFATSLSQEYQLAAETFNLTPSQVW
DLSYESINYIFASNNTRSELRKRWTHLKQKVLGCNEVNYF

hide sequence

RefSeq Acc Id:	XP_008760389 ⟸ XM_008762167
- Peptide Label:	isoform X4
- UniProtKB:	A0A8J8YAK5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTRKTYVESVLEGIKQCKQENLDIDVRYLMAIDRKGGPTVAKETVKLAKEFFLSAEDTVLGLDL SGDPTIGQAKDFLEPLLEAKKAGLKLALHLAEIPNKEKETQMLLDLLPDRIGHGTFLNTPEAGS VDQVNFVRQHRIPLELCLTSNIKSQTVPSYDQHHFGFWYSVAHPSVICTDDKGVFATSLSQEYQ LAAETFNLTPSQVWDLSYESINYIFASNNTRSELRKRWTHLKQKVLGCNEVNYF hide sequence

RefSeq Acc Id:

XP_017447223 ⟸ XM_017591734

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEARQQWARKTDFYMQLPKVELHAHLNGSISSSTMRKLIAKKPHLQVHGHMTMIDKGKKRTLEE
CFQMFQVIHQLTTSAEDILMVTKDVIKEFADDGVKYLELRSTPRGENATGMTRKTYVESVLEGI
KQCKQENLDIDVRYLMAIDRKGGPTVAKETVKLAKEFFLSAEDTVLGLDLSGDPTIGQAKDFLE
PLLEAKKAGLKLALHLAEIPNKEKETQMLLDLLPDRIGHGTFLNTPEAGSVDQVNFVRQHRIPL
ELCLTSNIKSQTVPSYDQHHFGFWYSVAHPSVICTDDKGVFATSLSQEYQLAAETFNLTPSQVW
DLSYESINYIFASNNTRSELRKRWTHLKQKVLGCNEVNYF

hide sequence

RefSeq Acc Id:	XP_017447225 ⟸ XM_017591736
- Peptide Label:	isoform X5
- UniProtKB:	Q5FVI8 (UniProtKB/TrEMBL), F1LRK5 (UniProtKB/TrEMBL), A0A8J8YAK5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAIDRKGGPTVAKETVKLAKEFFLSAEDTVLGLDLSGDPTIGQAKDFLEPLLEAKKAGLKLALH LAEIPNKEKETQMLLDLLPDRIGHGTFLNTPEAGSVDQVNFVRQHRIPLELCLTSNIKSQTVPS YDQHHFGFWYSVAHPSVICTDDKGVFATSLSQEYQLAAETFNLTPSQVWDLSYESINYIFASNN TRSELRKRWTHLKQKVLGCNEVNYF hide sequence

Ensembl Acc Id:

ENSRNOP00000016529 ⟸ ENSRNOT00000016529

RefSeq Acc Id:	XP_038960882 ⟸ XM_039104954
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038960883 ⟸ XM_039104955
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038960881 ⟸ XM_039104953
- Peptide Label:	isoform X1

Ensembl Acc Id:

ENSRNOP00000094885 ⟸ ENSRNOT00000119906

Ensembl Acc Id:

ENSRNOP00000082379 ⟸ ENSRNOT00000105568

RefSeq Acc Id:	XP_063139787 ⟸ XM_063283717
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063139784 ⟸ XM_063283714
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063139786 ⟸ XM_063283716
- Peptide Label:	isoform X4
- UniProtKB:	A0A8J8YAK5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139785 ⟸ XM_063283715
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSRNOP00000105046 ⟸ ENSRNOT00000151614

Ensembl Acc Id:

ENSRNOP00000105230 ⟸ ENSRNOT00000137477

Ensembl Acc Id:

ENSRNOP00000111630 ⟸ ENSRNOT00000159363

Ensembl Acc Id:

ENSRNOP00000100104 ⟸ ENSRNOT00000137433

Protein Domains

Adenosine deaminase CCHC-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5FVI8-F1-model_v2	AlphaFold	Q5FVI8	1-217	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1359517	AgrOrtholog
BioCyc Gene	G2FUF-48144	BioCyc
Ensembl Genes	ENSRNOG00000012166	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSRNOG00000069925	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000016529.9	UniProtKB/TrEMBL
	ENSRNOT00000105568.2	UniProtKB/TrEMBL
	ENSRNOT00000119906.2	UniProtKB/TrEMBL
	ENSRNOT00000137433.1	UniProtKB/TrEMBL
	ENSRNOT00000137477.1	UniProtKB/TrEMBL
	ENSRNOT00000151614.1	UniProtKB/TrEMBL
	ENSRNOT00000159363	ENTREZGENE
	ENSRNOT00000159363.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.1200.30	UniProtKB/TrEMBL
	1.10.150.490	UniProtKB/TrEMBL
	1.10.375.10	UniProtKB/TrEMBL
	Metal-dependent hydrolases	UniProtKB/TrEMBL
	Zinc finger, CCHC-type	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7313149	IMAGE-MGC_LOAD
InterPro	A/AMP_deaminase	UniProtKB/TrEMBL
	Ado/ade_deaminase	UniProtKB/TrEMBL
	B_retro_matrix	UniProtKB/TrEMBL
	B_retro_matrix_sf	UniProtKB/TrEMBL
	Gag_p24_C	UniProtKB/TrEMBL
	Metal_Hydrolase	UniProtKB/TrEMBL
	Primate_lentivirus_Gag_polypro	UniProtKB/TrEMBL
	Retrov_capsid_C	UniProtKB/TrEMBL
	Retrov_capsid_N	UniProtKB/TrEMBL
	Retrovr_matrix	UniProtKB/TrEMBL
	Znf_CCHC	UniProtKB/TrEMBL
	Znf_CCHC_sf	UniProtKB/TrEMBL
KEGG Report	rno:311352	UniProtKB/TrEMBL
MGC_CLONE	MGC:109297	IMAGE-MGC_LOAD
NCBI Gene	311352	ENTREZGENE
PANTHER	ADENOSINE DEAMINASE-LIKE PROTEIN	UniProtKB/TrEMBL
	ENDOGENOUS RETROVIRUS GROUP K MEMBER 24 GAG POLYPROTEIN-RELATED	UniProtKB/TrEMBL
	IGE-BINDING PROTEIN	UniProtKB/TrEMBL
	PTHR11409	UniProtKB/TrEMBL
Pfam	A_deaminase	UniProtKB/TrEMBL
	Gag_p10	UniProtKB/TrEMBL
	Gag_p24	UniProtKB/TrEMBL
	Gag_p24_C	UniProtKB/TrEMBL
	zf-CCHC	UniProtKB/TrEMBL
	zf-CCHC_5	UniProtKB/TrEMBL
PhenoGen	Mapda	PhenoGen
PROSITE	ZF_CCHC	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000012166	RatGTEx
	ENSRNOG00000069925	RatGTEx
SMART	ZnF_C2HC	UniProtKB/TrEMBL
Superfamily-SCOP	Retrovirus capsid dimerization domain-like	UniProtKB/TrEMBL
	SSF47836	UniProtKB/TrEMBL
	SSF47943	UniProtKB/TrEMBL
	SSF51556	UniProtKB/TrEMBL
	SSF57756	UniProtKB/TrEMBL
UniProt	A0A8I5ZWX3_RAT	UniProtKB/TrEMBL
	A0A8J8YAK5	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LMV3_RAT	UniProtKB/TrEMBL
	A0ABK0M726_RAT	UniProtKB/TrEMBL
	F1LRK5	ENTREZGENE
	Q5FVI8	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	F1LRK5	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2024-11-07	Mapda	N6-Methyl-AMP deaminase	Adal	adenosine deaminase-like	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2013-08-09	Adal	adenosine deaminase-like	LOC311352	similar to Adenosine deaminase CG11994-PA	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-07-29	LOC311352	similar to Adenosine deaminase CG11994-PA			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message